Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc13a23
(444 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L38941-1|AAC41916.1| 117|Homo sapiens ribosomal protein L34 pro... 134 1e-31
CR542242-1|CAG47038.1| 117|Homo sapiens RPL34 protein. 130 3e-30
CR542232-1|CAG47028.1| 117|Homo sapiens RPL34 protein. 130 3e-30
BC106009-1|AAI06010.1| 117|Homo sapiens ribosomal protein L34 p... 130 3e-30
BC070208-1|AAH70208.1| 117|Homo sapiens ribosomal protein L34 p... 130 3e-30
BC001773-1|AAH01773.1| 117|Homo sapiens ribosomal protein L34 p... 130 3e-30
AB061832-1|BAB79470.1| 117|Homo sapiens ribosomal protein L34 p... 130 3e-30
AB007181-1|BAA25840.1| 45|Homo sapiens ribosomal protein L34 p... 60 3e-09
BC037582-1|AAH37582.1| 349|Homo sapiens ATXN7L2 protein protein. 30 3.1
BC036849-1|AAH36849.1| 580|Homo sapiens ataxin 7-like 2 protein. 30 3.1
AL355145-2|CAI22938.1| 349|Homo sapiens ataxin 7-like 2 protein. 30 3.1
AL355145-1|CAI22937.1| 722|Homo sapiens ataxin 7-like 2 protein. 30 3.1
BC117673-1|AAI17674.1| 905|Homo sapiens CAPRIN2 protein protein. 30 4.1
BC117672-1|AAI17673.1| 960|Homo sapiens CAPRIN2 protein protein. 30 4.1
AY074490-1|AAL71549.1| 1077|Homo sapiens EEG1L protein. 30 4.1
AF326778-1|AAK83153.1| 263|Homo sapiens gastric cancer multidru... 30 4.1
AB058776-1|BAB47502.1| 477|Homo sapiens KIAA1873 protein protein. 30 4.1
AK021453-1|BAB13830.1| 443|Homo sapiens protein ( Homo sapiens ... 29 5.5
BC113377-1|AAI13378.1| 1043|Homo sapiens F-box protein, helicase... 29 7.2
BC113375-1|AAI13376.1| 1043|Homo sapiens F-box protein, helicase... 29 7.2
BC110884-1|AAI10885.1| 969|Homo sapiens FBXO18 protein protein. 29 7.2
BC080629-1|AAH80629.1| 978|Homo sapiens FBXO18 protein protein. 29 7.2
BC032674-1|AAH32674.2| 908|Homo sapiens FBXO18 protein protein. 29 7.2
BC012762-1|AAH12762.2| 338|Homo sapiens FBXO18 protein protein. 29 7.2
AL137186-6|CAI41074.1| 1094|Homo sapiens F-box protein, helicase... 29 7.2
AL137186-5|CAI41073.1| 1043|Homo sapiens F-box protein, helicase... 29 7.2
AL133069-1|CAB61392.1| 281|Homo sapiens hypothetical protein pr... 29 7.2
AK095343-1|BAC04535.1| 1043|Homo sapiens protein ( Homo sapiens ... 29 7.2
AK027496-1|BAB55154.1| 779|Homo sapiens protein ( Homo sapiens ... 29 7.2
AK027381-1|BAB55073.1| 455|Homo sapiens protein ( Homo sapiens ... 29 7.2
AF456237-1|AAP97705.1| 1043|Homo sapiens testis protein protein. 29 7.2
AF454502-1|AAP97700.1| 1042|Homo sapiens hypothetical protein pr... 29 7.2
AF380349-1|AAM73631.1| 969|Homo sapiens F-box DNA helicase 1 pr... 29 7.2
>L38941-1|AAC41916.1| 117|Homo sapiens ribosomal protein L34
protein.
Length = 117
Score = 134 bits (324), Expect = 1e-31
Identities = 68/107 (63%), Positives = 77/107 (71%), Gaps = 3/107 (2%)
Frame = +3
Query: 36 MVQRLTFRRRLSYNTKSNQRRIVRTPGGRLVYQYVKKPKKIPR--CGQCKSKLRGIQPAR 209
MVQRLT+RRRLSYNT SN+ R+ RTPG R+VY Y KK K P+ CG C KLRG++P R
Sbjct: 1 MVQRLTYRRRLSYNTASNKTRLSRTPGNRIVYLYTKKVGKAPKSACGVCPGKLRGVRPVR 60
Query: 210 PAERSRLCYRKKTVKRVYGGVLCHKCVKQRIVRAFLIEEQK-IVKVL 347
P RL KK V R YGG +C KCV+ RI RAFLIEEQK IVKVL
Sbjct: 61 PKVLMRLSKTKKHVSRAYGGSMCAKCVRDRIKRAFLIEEQKIIVKVL 107
>CR542242-1|CAG47038.1| 117|Homo sapiens RPL34 protein.
Length = 117
Score = 130 bits (313), Expect = 3e-30
Identities = 66/107 (61%), Positives = 76/107 (71%), Gaps = 3/107 (2%)
Frame = +3
Query: 36 MVQRLTFRRRLSYNTKSNQRRIVRTPGGRLVYQYVKKPKKIPR--CGQCKSKLRGIQPAR 209
MVQRLT+RRRLSYNT SN+ R+ RTPG R+VY Y KK K P+ CG C +LRG++ R
Sbjct: 1 MVQRLTYRRRLSYNTASNKTRLSRTPGNRIVYLYTKKVGKAPKSACGVCPGRLRGVRAVR 60
Query: 210 PAERSRLCYRKKTVKRVYGGVLCHKCVKQRIVRAFLIEEQKI-VKVL 347
P RL KK V R YGG +C KCV+ RI RAFLIEEQKI VKVL
Sbjct: 61 PKVLMRLSKTKKHVSRAYGGSMCAKCVRDRIKRAFLIEEQKIVVKVL 107
>CR542232-1|CAG47028.1| 117|Homo sapiens RPL34 protein.
Length = 117
Score = 130 bits (313), Expect = 3e-30
Identities = 66/107 (61%), Positives = 76/107 (71%), Gaps = 3/107 (2%)
Frame = +3
Query: 36 MVQRLTFRRRLSYNTKSNQRRIVRTPGGRLVYQYVKKPKKIPR--CGQCKSKLRGIQPAR 209
MVQRLT+RRRLSYNT SN+ R+ RTPG R+VY Y KK K P+ CG C +LRG++ R
Sbjct: 1 MVQRLTYRRRLSYNTASNKTRLSRTPGNRIVYLYTKKVGKAPKSACGVCPGRLRGVRAVR 60
Query: 210 PAERSRLCYRKKTVKRVYGGVLCHKCVKQRIVRAFLIEEQKI-VKVL 347
P RL KK V R YGG +C KCV+ RI RAFLIEEQKI VKVL
Sbjct: 61 PKVLMRLSKTKKHVSRAYGGSMCAKCVRDRIKRAFLIEEQKIVVKVL 107
>BC106009-1|AAI06010.1| 117|Homo sapiens ribosomal protein L34
protein.
Length = 117
Score = 130 bits (313), Expect = 3e-30
Identities = 66/107 (61%), Positives = 76/107 (71%), Gaps = 3/107 (2%)
Frame = +3
Query: 36 MVQRLTFRRRLSYNTKSNQRRIVRTPGGRLVYQYVKKPKKIPR--CGQCKSKLRGIQPAR 209
MVQRLT+RRRLSYNT SN+ R+ RTPG R+VY Y KK K P+ CG C +LRG++ R
Sbjct: 1 MVQRLTYRRRLSYNTASNKTRLSRTPGNRIVYLYTKKVGKAPKSACGVCPGRLRGVRAVR 60
Query: 210 PAERSRLCYRKKTVKRVYGGVLCHKCVKQRIVRAFLIEEQKI-VKVL 347
P RL KK V R YGG +C KCV+ RI RAFLIEEQKI VKVL
Sbjct: 61 PKVLMRLSKTKKHVSRAYGGSMCAKCVRDRIKRAFLIEEQKIVVKVL 107
>BC070208-1|AAH70208.1| 117|Homo sapiens ribosomal protein L34
protein.
Length = 117
Score = 130 bits (313), Expect = 3e-30
Identities = 66/107 (61%), Positives = 76/107 (71%), Gaps = 3/107 (2%)
Frame = +3
Query: 36 MVQRLTFRRRLSYNTKSNQRRIVRTPGGRLVYQYVKKPKKIPR--CGQCKSKLRGIQPAR 209
MVQRLT+RRRLSYNT SN+ R+ RTPG R+VY Y KK K P+ CG C +LRG++ R
Sbjct: 1 MVQRLTYRRRLSYNTASNKTRLSRTPGNRIVYLYTKKVGKAPKSACGVCPGRLRGVRAVR 60
Query: 210 PAERSRLCYRKKTVKRVYGGVLCHKCVKQRIVRAFLIEEQKI-VKVL 347
P RL KK V R YGG +C KCV+ RI RAFLIEEQKI VKVL
Sbjct: 61 PKVLMRLSKTKKHVSRAYGGSMCAKCVRDRIKRAFLIEEQKIVVKVL 107
>BC001773-1|AAH01773.1| 117|Homo sapiens ribosomal protein L34
protein.
Length = 117
Score = 130 bits (313), Expect = 3e-30
Identities = 66/107 (61%), Positives = 76/107 (71%), Gaps = 3/107 (2%)
Frame = +3
Query: 36 MVQRLTFRRRLSYNTKSNQRRIVRTPGGRLVYQYVKKPKKIPR--CGQCKSKLRGIQPAR 209
MVQRLT+RRRLSYNT SN+ R+ RTPG R+VY Y KK K P+ CG C +LRG++ R
Sbjct: 1 MVQRLTYRRRLSYNTASNKTRLSRTPGNRIVYLYTKKVGKAPKSACGVCPGRLRGVRAVR 60
Query: 210 PAERSRLCYRKKTVKRVYGGVLCHKCVKQRIVRAFLIEEQKI-VKVL 347
P RL KK V R YGG +C KCV+ RI RAFLIEEQKI VKVL
Sbjct: 61 PKVLMRLSKTKKHVSRAYGGSMCAKCVRDRIKRAFLIEEQKIVVKVL 107
>AB061832-1|BAB79470.1| 117|Homo sapiens ribosomal protein L34
protein.
Length = 117
Score = 130 bits (313), Expect = 3e-30
Identities = 66/107 (61%), Positives = 76/107 (71%), Gaps = 3/107 (2%)
Frame = +3
Query: 36 MVQRLTFRRRLSYNTKSNQRRIVRTPGGRLVYQYVKKPKKIPR--CGQCKSKLRGIQPAR 209
MVQRLT+RRRLSYNT SN+ R+ RTPG R+VY Y KK K P+ CG C +LRG++ R
Sbjct: 1 MVQRLTYRRRLSYNTASNKTRLSRTPGNRIVYLYTKKVGKAPKSACGVCPGRLRGVRAVR 60
Query: 210 PAERSRLCYRKKTVKRVYGGVLCHKCVKQRIVRAFLIEEQKI-VKVL 347
P RL KK V R YGG +C KCV+ RI RAFLIEEQKI VKVL
Sbjct: 61 PKVLMRLSKTKKHVSRAYGGSMCAKCVRDRIKRAFLIEEQKIVVKVL 107
>AB007181-1|BAA25840.1| 45|Homo sapiens ribosomal protein L34
protein.
Length = 45
Score = 60.1 bits (139), Expect = 3e-09
Identities = 28/44 (63%), Positives = 33/44 (75%), Gaps = 2/44 (4%)
Frame = +3
Query: 45 RLTFRRRLSYNTKSNQRRIVRTPGGRLVYQYVKKPKKIPR--CG 170
RLT+RRRLSYNT SN+ R+ RTPG R+VY Y KK K P+ CG
Sbjct: 1 RLTYRRRLSYNTASNKTRLSRTPGNRIVYLYTKKVGKAPKSACG 44
>BC037582-1|AAH37582.1| 349|Homo sapiens ATXN7L2 protein protein.
Length = 349
Score = 30.3 bits (65), Expect = 3.1
Identities = 15/45 (33%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
Frame = -3
Query: 391 FVAFFADLVLACCAL--RTFTIFCSSIRKALTMRCLTHLWQRTPP 263
F F + LV C + R FCS++ L TH+W++ PP
Sbjct: 40 FCTFGSRLVSPGCYVFSRRLDRFCSALSSMLERHLSTHMWKKIPP 84
>BC036849-1|AAH36849.1| 580|Homo sapiens ataxin 7-like 2 protein.
Length = 580
Score = 30.3 bits (65), Expect = 3.1
Identities = 15/45 (33%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
Frame = -3
Query: 391 FVAFFADLVLACCAL--RTFTIFCSSIRKALTMRCLTHLWQRTPP 263
F F + LV C + R FCS++ L TH+W++ PP
Sbjct: 413 FCTFGSRLVSPGCYVFSRRLDRFCSALSSMLERHLSTHMWKKIPP 457
>AL355145-2|CAI22938.1| 349|Homo sapiens ataxin 7-like 2 protein.
Length = 349
Score = 30.3 bits (65), Expect = 3.1
Identities = 15/45 (33%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
Frame = -3
Query: 391 FVAFFADLVLACCAL--RTFTIFCSSIRKALTMRCLTHLWQRTPP 263
F F + LV C + R FCS++ L TH+W++ PP
Sbjct: 40 FCTFGSRLVSPGCYVFSRRLDRFCSALSSMLERHLSTHMWKKIPP 84
>AL355145-1|CAI22937.1| 722|Homo sapiens ataxin 7-like 2 protein.
Length = 722
Score = 30.3 bits (65), Expect = 3.1
Identities = 15/45 (33%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
Frame = -3
Query: 391 FVAFFADLVLACCAL--RTFTIFCSSIRKALTMRCLTHLWQRTPP 263
F F + LV C + R FCS++ L TH+W++ PP
Sbjct: 413 FCTFGSRLVSPGCYVFSRRLDRFCSALSSMLERHLSTHMWKKIPP 457
>BC117673-1|AAI17674.1| 905|Homo sapiens CAPRIN2 protein protein.
Length = 905
Score = 29.9 bits (64), Expect = 4.1
Identities = 16/46 (34%), Positives = 23/46 (50%)
Frame = +2
Query: 140 QKAQEDPKVWSVQEQTPWYPAS*TC*TFSSLLP*ENSETCLWWCPL 277
QK QE PK+W VQ Q P T +++ + E + T W P+
Sbjct: 488 QKKQETPKLWPVQLQKEQDPKKQTPKSWTPSMQSEQNTTKSWTTPM 533
>BC117672-1|AAI17673.1| 960|Homo sapiens CAPRIN2 protein protein.
Length = 960
Score = 29.9 bits (64), Expect = 4.1
Identities = 16/46 (34%), Positives = 23/46 (50%)
Frame = +2
Query: 140 QKAQEDPKVWSVQEQTPWYPAS*TC*TFSSLLP*ENSETCLWWCPL 277
QK QE PK+W VQ Q P T +++ + E + T W P+
Sbjct: 488 QKKQETPKLWPVQLQKEQDPKKQTPKSWTPSMQSEQNTTKSWTTPM 533
>AY074490-1|AAL71549.1| 1077|Homo sapiens EEG1L protein.
Length = 1077
Score = 29.9 bits (64), Expect = 4.1
Identities = 16/46 (34%), Positives = 23/46 (50%)
Frame = +2
Query: 140 QKAQEDPKVWSVQEQTPWYPAS*TC*TFSSLLP*ENSETCLWWCPL 277
QK QE PK+W VQ Q P T +++ + E + T W P+
Sbjct: 488 QKKQETPKLWPVQLQKEQDPKKQTPKSWTPSMQSEQNTTKSWTTPM 533
>AF326778-1|AAK83153.1| 263|Homo sapiens gastric cancer multidrug
resistance-associated protein protein.
Length = 263
Score = 29.9 bits (64), Expect = 4.1
Identities = 16/46 (34%), Positives = 23/46 (50%)
Frame = +2
Query: 140 QKAQEDPKVWSVQEQTPWYPAS*TC*TFSSLLP*ENSETCLWWCPL 277
QK QE PK+W VQ Q P T +++ + E + T W P+
Sbjct: 155 QKKQETPKLWPVQLQKEQDPKKQTPKSWTPSMQSEQNTTKSWTTPM 200
>AB058776-1|BAB47502.1| 477|Homo sapiens KIAA1873 protein protein.
Length = 477
Score = 29.9 bits (64), Expect = 4.1
Identities = 16/46 (34%), Positives = 23/46 (50%)
Frame = +2
Query: 140 QKAQEDPKVWSVQEQTPWYPAS*TC*TFSSLLP*ENSETCLWWCPL 277
QK QE PK+W VQ Q P T +++ + E + T W P+
Sbjct: 170 QKKQETPKLWPVQLQKEQDPKKQTPKSWTPSMQSEQNTTKSWTTPM 215
>AK021453-1|BAB13830.1| 443|Homo sapiens protein ( Homo sapiens
cDNA FLJ11391 fis, clone HEMBA1000569, weakly similar to
GPI-ANCHORED PROTEIN P137. ).
Length = 443
Score = 29.5 bits (63), Expect = 5.5
Identities = 16/46 (34%), Positives = 23/46 (50%)
Frame = +2
Query: 140 QKAQEDPKVWSVQEQTPWYPAS*TC*TFSSLLP*ENSETCLWWCPL 277
QK QE PK+W VQ Q P T +++ + E + T W P+
Sbjct: 155 QKKQETPKLWPVQLQKEQDPKKQTPKSWTPSVQSEQNTTKSWTTPM 200
>BC113377-1|AAI13378.1| 1043|Homo sapiens F-box protein, helicase, 18
protein.
Length = 1043
Score = 29.1 bits (62), Expect = 7.2
Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 3/67 (4%)
Frame = +3
Query: 156 IPRC--GQCKSKLRGIQPARPAERSRLCYRKKTVKRVYGGVLCHKCVKQRI-VRAFLIEE 326
+ RC GQC + + + ++ + Y + K GG LCH C +QRI AFL
Sbjct: 960 VVRCCVGQCNNAIP-VDTVLTMKKLPITYSNR--KENKGGYLCHSCAEQRIGPLAFLTAS 1016
Query: 327 QKIVKVL 347
+ V+ +
Sbjct: 1017 PEQVRAM 1023
>BC113375-1|AAI13376.1| 1043|Homo sapiens F-box protein, helicase, 18
protein.
Length = 1043
Score = 29.1 bits (62), Expect = 7.2
Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 3/67 (4%)
Frame = +3
Query: 156 IPRC--GQCKSKLRGIQPARPAERSRLCYRKKTVKRVYGGVLCHKCVKQRI-VRAFLIEE 326
+ RC GQC + + + ++ + Y + K GG LCH C +QRI AFL
Sbjct: 960 VVRCCVGQCNNAIP-VDTVLTMKKLPITYSNR--KENKGGYLCHSCAEQRIGPLAFLTAS 1016
Query: 327 QKIVKVL 347
+ V+ +
Sbjct: 1017 PEQVRAM 1023
>BC110884-1|AAI10885.1| 969|Homo sapiens FBXO18 protein protein.
Length = 969
Score = 29.1 bits (62), Expect = 7.2
Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 3/67 (4%)
Frame = +3
Query: 156 IPRC--GQCKSKLRGIQPARPAERSRLCYRKKTVKRVYGGVLCHKCVKQRI-VRAFLIEE 326
+ RC GQC + + + ++ + Y + K GG LCH C +QRI AFL
Sbjct: 886 VVRCCVGQCNNAIP-VDTVLTMKKLPITYSNR--KENKGGYLCHSCAEQRIGPLAFLTAS 942
Query: 327 QKIVKVL 347
+ V+ +
Sbjct: 943 PEQVRAM 949
>BC080629-1|AAH80629.1| 978|Homo sapiens FBXO18 protein protein.
Length = 978
Score = 29.1 bits (62), Expect = 7.2
Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 3/67 (4%)
Frame = +3
Query: 156 IPRC--GQCKSKLRGIQPARPAERSRLCYRKKTVKRVYGGVLCHKCVKQRI-VRAFLIEE 326
+ RC GQC + + + ++ + Y + K GG LCH C +QRI AFL
Sbjct: 895 VVRCCVGQCNNAIP-VDTVLTMKKLPITYSNR--KENKGGYLCHSCAEQRIGPLAFLTAS 951
Query: 327 QKIVKVL 347
+ V+ +
Sbjct: 952 PEQVRAM 958
>BC032674-1|AAH32674.2| 908|Homo sapiens FBXO18 protein protein.
Length = 908
Score = 29.1 bits (62), Expect = 7.2
Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 3/67 (4%)
Frame = +3
Query: 156 IPRC--GQCKSKLRGIQPARPAERSRLCYRKKTVKRVYGGVLCHKCVKQRI-VRAFLIEE 326
+ RC GQC + + + ++ + Y + K GG LCH C +QRI AFL
Sbjct: 825 VVRCCVGQCNNAIP-VDTVLTMKKLPITYSNR--KENKGGYLCHSCAEQRIGPLAFLTAS 881
Query: 327 QKIVKVL 347
+ V+ +
Sbjct: 882 PEQVRAM 888
>BC012762-1|AAH12762.2| 338|Homo sapiens FBXO18 protein protein.
Length = 338
Score = 29.1 bits (62), Expect = 7.2
Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 3/67 (4%)
Frame = +3
Query: 156 IPRC--GQCKSKLRGIQPARPAERSRLCYRKKTVKRVYGGVLCHKCVKQRI-VRAFLIEE 326
+ RC GQC + + + ++ + Y + K GG LCH C +QRI AFL
Sbjct: 255 VVRCCVGQCNNAIP-VDTVLTMKKLPITYSNR--KENKGGYLCHSCAEQRIGPLAFLTAS 311
Query: 327 QKIVKVL 347
+ V+ +
Sbjct: 312 PEQVRAM 318
>AL137186-6|CAI41074.1| 1094|Homo sapiens F-box protein, helicase, 18
protein.
Length = 1094
Score = 29.1 bits (62), Expect = 7.2
Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 3/67 (4%)
Frame = +3
Query: 156 IPRC--GQCKSKLRGIQPARPAERSRLCYRKKTVKRVYGGVLCHKCVKQRI-VRAFLIEE 326
+ RC GQC + + + ++ + Y + K GG LCH C +QRI AFL
Sbjct: 1011 VVRCCVGQCNNAIP-VDTVLTMKKLPITYSNR--KENKGGYLCHSCAEQRIGPLAFLTAS 1067
Query: 327 QKIVKVL 347
+ V+ +
Sbjct: 1068 PEQVRAM 1074
>AL137186-5|CAI41073.1| 1043|Homo sapiens F-box protein, helicase, 18
protein.
Length = 1043
Score = 29.1 bits (62), Expect = 7.2
Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 3/67 (4%)
Frame = +3
Query: 156 IPRC--GQCKSKLRGIQPARPAERSRLCYRKKTVKRVYGGVLCHKCVKQRI-VRAFLIEE 326
+ RC GQC + + + ++ + Y + K GG LCH C +QRI AFL
Sbjct: 960 VVRCCVGQCNNAIP-VDTVLTMKKLPITYSNR--KENKGGYLCHSCAEQRIGPLAFLTAS 1016
Query: 327 QKIVKVL 347
+ V+ +
Sbjct: 1017 PEQVRAM 1023
>AL133069-1|CAB61392.1| 281|Homo sapiens hypothetical protein
protein.
Length = 281
Score = 29.1 bits (62), Expect = 7.2
Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 3/67 (4%)
Frame = +3
Query: 156 IPRC--GQCKSKLRGIQPARPAERSRLCYRKKTVKRVYGGVLCHKCVKQRI-VRAFLIEE 326
+ RC GQC + + + ++ + Y + K GG LCH C +QRI AFL
Sbjct: 198 VVRCCVGQCNNAIP-VDTVLTMKKLPITYSNR--KENKGGYLCHSCAEQRIGPLAFLTAS 254
Query: 327 QKIVKVL 347
+ V+ +
Sbjct: 255 PEQVRAM 261
>AK095343-1|BAC04535.1| 1043|Homo sapiens protein ( Homo sapiens cDNA
FLJ38024 fis, clone CTONG2012996, highly similar to Mus
musculus F-box protein FBX18 mRNA. ).
Length = 1043
Score = 29.1 bits (62), Expect = 7.2
Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 3/67 (4%)
Frame = +3
Query: 156 IPRC--GQCKSKLRGIQPARPAERSRLCYRKKTVKRVYGGVLCHKCVKQRI-VRAFLIEE 326
+ RC GQC + + + ++ + Y + K GG LCH C +QRI AFL
Sbjct: 960 VVRCCVGQCNNAIP-VDTVLTMKKLPITYSNR--KENKGGYLCHSCAEQRIGPLAFLTAS 1016
Query: 327 QKIVKVL 347
+ V+ +
Sbjct: 1017 PEQVRAM 1023
>AK027496-1|BAB55154.1| 779|Homo sapiens protein ( Homo sapiens
cDNA FLJ14590 fis, clone NT2RM4001880, weakly similar to
PUTATIVE DNA HELICASE II HOMOLOG (EC 3.6.1.-). ).
Length = 779
Score = 29.1 bits (62), Expect = 7.2
Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 3/67 (4%)
Frame = +3
Query: 156 IPRC--GQCKSKLRGIQPARPAERSRLCYRKKTVKRVYGGVLCHKCVKQRI-VRAFLIEE 326
+ RC GQC + + + ++ + Y + K GG LCH C +QRI AFL
Sbjct: 696 VVRCCVGQCNNAIP-VDTVLTMKKLLITYSNR--KENKGGYLCHSCAEQRIGPLAFLTAS 752
Query: 327 QKIVKVL 347
+ V+ +
Sbjct: 753 PEQVRAM 759
>AK027381-1|BAB55073.1| 455|Homo sapiens protein ( Homo sapiens
cDNA FLJ14475 fis, clone MAMMA1001259, highly similar to
Mus musculus F-box protein FBX18 mRNA. ).
Length = 455
Score = 29.1 bits (62), Expect = 7.2
Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 3/67 (4%)
Frame = +3
Query: 156 IPRC--GQCKSKLRGIQPARPAERSRLCYRKKTVKRVYGGVLCHKCVKQRI-VRAFLIEE 326
+ RC GQC + + + ++ + Y + K GG LCH C +QRI AFL
Sbjct: 372 VVRCCVGQCNNAIP-VDTVLTMKKLPITYSNR--KENKGGYLCHSCAEQRIGPLAFLTAS 428
Query: 327 QKIVKVL 347
+ V+ +
Sbjct: 429 PEQVRAM 435
>AF456237-1|AAP97705.1| 1043|Homo sapiens testis protein protein.
Length = 1043
Score = 29.1 bits (62), Expect = 7.2
Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 3/67 (4%)
Frame = +3
Query: 156 IPRC--GQCKSKLRGIQPARPAERSRLCYRKKTVKRVYGGVLCHKCVKQRI-VRAFLIEE 326
+ RC GQC + + + ++ + Y + K GG LCH C +QRI AFL
Sbjct: 960 VVRCCVGQCNNAIP-VDTVLTMKKLPITYSNR--KENKGGYLCHSCAEQRIGPLAFLTAS 1016
Query: 327 QKIVKVL 347
+ V+ +
Sbjct: 1017 PEQVRAM 1023
>AF454502-1|AAP97700.1| 1042|Homo sapiens hypothetical protein
protein.
Length = 1042
Score = 29.1 bits (62), Expect = 7.2
Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 3/67 (4%)
Frame = +3
Query: 156 IPRC--GQCKSKLRGIQPARPAERSRLCYRKKTVKRVYGGVLCHKCVKQRI-VRAFLIEE 326
+ RC GQC + + + ++ + Y + K GG LCH C +QRI AFL
Sbjct: 959 VVRCCVGQCNNAIP-VDTVLTMKKLLITYSNR--KENKGGYLCHSCAEQRIGPLAFLTAS 1015
Query: 327 QKIVKVL 347
+ V+ +
Sbjct: 1016 PEQVRAM 1022
>AF380349-1|AAM73631.1| 969|Homo sapiens F-box DNA helicase 1
protein.
Length = 969
Score = 29.1 bits (62), Expect = 7.2
Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 3/67 (4%)
Frame = +3
Query: 156 IPRC--GQCKSKLRGIQPARPAERSRLCYRKKTVKRVYGGVLCHKCVKQRI-VRAFLIEE 326
+ RC GQC + + + ++ + Y + K GG LCH C +QRI AFL
Sbjct: 886 VVRCCVGQCNNAIP-VDTVLTMKKLPITYSNR--KENKGGYLCHSCAEQRIGPLAFLTAS 942
Query: 327 QKIVKVL 347
+ V+ +
Sbjct: 943 PEQVRAM 949
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 58,076,125
Number of Sequences: 237096
Number of extensions: 1198844
Number of successful extensions: 2762
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 2647
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2755
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3659526016
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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