Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc13a22
         (388 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A4FSG8 Cluster: Putative uncharacterized protein; n=1; ...    75   6e-13
UniRef50_A5Z1D8 Cluster: Putative uncharacterized protein; n=1; ...    44   0.001
UniRef50_A7FPQ7 Cluster: Conserved domain protein; n=3; Clostrid...    36   0.36 
UniRef50_O15792 Cluster: CG2; n=89; Plasmodium falciparum|Rep: C...    33   1.9  
UniRef50_Q48574 Cluster: ORFC; n=2; Leptospira interrogans|Rep: ...    33   2.5  

>UniRef50_A4FSG8 Cluster: Putative uncharacterized protein; n=1;
           Thermobia domestica|Rep: Putative uncharacterized
           protein - Thermobia domestica (firebrat)
          Length = 53

 Score = 74.5 bits (175), Expect = 6e-13
 Identities = 35/53 (66%), Positives = 43/53 (81%)
 Frame = +1

Query: 148 LIKRKNYLRDNSVIFFFSSNKKKSLRPRCWIKIKFKCRSLKF*SVRSLKSYMI 306
           +I R +YLRDNSVIFF +S +++ LRPRCWIKI  +CRSL + SVR LKSYMI
Sbjct: 1   MIVRLSYLRDNSVIFFENSYRQERLRPRCWIKILSRCRSLVYRSVRPLKSYMI 53


>UniRef50_A5Z1D8 Cluster: Putative uncharacterized protein; n=1;
           Haemaphysalis qinghaiensis|Rep: Putative uncharacterized
           protein - Haemaphysalis qinghaiensis
          Length = 30

 Score = 44.0 bits (99), Expect = 0.001
 Identities = 19/30 (63%), Positives = 22/30 (73%)
 Frame = +3

Query: 255 M*KFKILICSIIKILHDLSSNRCEPGWFLS 344
           M K K  +CS  +ILHDLS +RCE GWFLS
Sbjct: 1   MKKLKKEVCSTFEILHDLSLDRCESGWFLS 30


>UniRef50_A7FPQ7 Cluster: Conserved domain protein; n=3; Clostridium
           botulinum A|Rep: Conserved domain protein - Clostridium
           botulinum (strain ATCC 19397 / Type A)
          Length = 479

 Score = 35.5 bits (78), Expect = 0.36
 Identities = 16/41 (39%), Positives = 25/41 (60%)
 Frame = +3

Query: 264 FKILICSIIKILHDLSSNRCEPGWFLSFNIYNILVRKD*KK 386
           +KI    IIK+++ L  N CE G+  SFN YN + ++  +K
Sbjct: 277 YKISDYRIIKLINALEDNSCEVGYHYSFNSYNSISKRSKEK 317


>UniRef50_O15792 Cluster: CG2; n=89; Plasmodium falciparum|Rep: CG2 -
            Plasmodium falciparum
          Length = 2819

 Score = 33.1 bits (72), Expect = 1.9
 Identities = 26/80 (32%), Positives = 37/80 (46%), Gaps = 4/80 (5%)
 Frame = +1

Query: 73   VGVIKKFN*LFLIVYINK*LNDPILLIKRKNYLRD----NSVIFFFSSNKKKSLRPRCWI 240
            +  I +   ++    IN  L    + +KR  YL +    N+ I FF + + K L  R  I
Sbjct: 2088 INTINENGNMYTYSLINSTLTLNNIHMKRWKYLINTYCFNNYIMFFQTTQNKYLLNRRLI 2147

Query: 241  KIKFKCRSLKF*SVRSLKSY 300
            K  F  RSLKF     +KSY
Sbjct: 2148 KKAFFLRSLKFDDFNDIKSY 2167


>UniRef50_Q48574 Cluster: ORFC; n=2; Leptospira interrogans|Rep:
           ORFC - Leptospira interrogans serovar
           Icterohaemorrhagiae
          Length = 85

 Score = 32.7 bits (71), Expect = 2.5
 Identities = 13/43 (30%), Positives = 26/43 (60%)
 Frame = +1

Query: 106 LIVYINK*LNDPILLIKRKNYLRDNSVIFFFSSNKKKSLRPRC 234
           + VY NK L D  ++++   + + N + F FS N++++ + RC
Sbjct: 5   ICVYYNKLLYDQKVILRLLEFYKSNYIPFLFSENQRRTRQLRC 47


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 266,434,787
Number of Sequences: 1657284
Number of extensions: 4123399
Number of successful extensions: 5806
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5731
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5805
length of database: 575,637,011
effective HSP length: 91
effective length of database: 424,824,167
effective search space used: 15718494179
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)