Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc13a17
         (644 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U02964-1|AAA03444.1|  376|Anopheles gambiae actin 1D protein.          37   5e-04
U02933-1|AAA56882.1|  376|Anopheles gambiae actin 1D protein.          37   5e-04
U02930-1|AAA56881.1|  376|Anopheles gambiae actin 1D protein.          37   5e-04
CR954256-1|CAJ14142.1|  376|Anopheles gambiae actin protein.           37   5e-04
AY578811-1|AAT07316.1|  565|Anopheles gambiae thickveins protein.      31   0.024
AF543192-1|AAN40409.1|  636|Anopheles gambiae amino acid transpo...    25   2.7  
DQ989011-1|ABK97612.1|  467|Anopheles gambiae gustatory receptor...    24   3.6  

>U02964-1|AAA03444.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score = 37.1 bits (82), Expect = 5e-04
 Identities = 12/32 (37%), Positives = 22/32 (68%)
 Frame = +1

Query: 226 LIIDNGSYQCRVGWSISEEPHLIFKNLIARPR 321
           L++DNGS  C+ G++  + P  +F +++ RPR
Sbjct: 9   LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPR 40



 Score = 25.8 bits (54), Expect = 1.2
 Identities = 14/52 (26%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
 Frame = +2

Query: 419 KTQFDKNVVTHFEVQEQVCDYIF-SHLGIDSEGAVNHPIVMTEAFVTPNYSR 571
           K   +  +VT+++  E++  + F + L +  E    HP+++TEA + P  +R
Sbjct: 69  KYPIEHGIVTNWDDMEKIWHHTFYNELRVAPE---EHPVLLTEAPLNPKANR 117


>U02933-1|AAA56882.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score = 37.1 bits (82), Expect = 5e-04
 Identities = 12/32 (37%), Positives = 22/32 (68%)
 Frame = +1

Query: 226 LIIDNGSYQCRVGWSISEEPHLIFKNLIARPR 321
           L++DNGS  C+ G++  + P  +F +++ RPR
Sbjct: 9   LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPR 40



 Score = 25.8 bits (54), Expect = 1.2
 Identities = 14/52 (26%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
 Frame = +2

Query: 419 KTQFDKNVVTHFEVQEQVCDYIF-SHLGIDSEGAVNHPIVMTEAFVTPNYSR 571
           K   +  +VT+++  E++  + F + L +  E    HP+++TEA + P  +R
Sbjct: 69  KYPIEHGIVTNWDDMEKIWHHTFYNELRVAPE---EHPVLLTEAPLNPKANR 117


>U02930-1|AAA56881.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score = 37.1 bits (82), Expect = 5e-04
 Identities = 12/32 (37%), Positives = 22/32 (68%)
 Frame = +1

Query: 226 LIIDNGSYQCRVGWSISEEPHLIFKNLIARPR 321
           L++DNGS  C+ G++  + P  +F +++ RPR
Sbjct: 9   LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPR 40



 Score = 25.8 bits (54), Expect = 1.2
 Identities = 14/52 (26%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
 Frame = +2

Query: 419 KTQFDKNVVTHFEVQEQVCDYIF-SHLGIDSEGAVNHPIVMTEAFVTPNYSR 571
           K   +  +VT+++  E++  + F + L +  E    HP+++TEA + P  +R
Sbjct: 69  KYPIEHGIVTNWDDMEKIWHHTFYNELRVAPE---EHPVLLTEAPLNPKANR 117


>CR954256-1|CAJ14142.1|  376|Anopheles gambiae actin protein.
          Length = 376

 Score = 37.1 bits (82), Expect = 5e-04
 Identities = 12/32 (37%), Positives = 22/32 (68%)
 Frame = +1

Query: 226 LIIDNGSYQCRVGWSISEEPHLIFKNLIARPR 321
           L++DNGS  C+ G++  + P  +F +++ RPR
Sbjct: 9   LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPR 40



 Score = 25.4 bits (53), Expect = 1.6
 Identities = 13/52 (25%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
 Frame = +2

Query: 419 KTQFDKNVVTHFEVQEQVCDYIF-SHLGIDSEGAVNHPIVMTEAFVTPNYSR 571
           K   +  ++T+++  E++  + F + L +  E    HP+++TEA + P  +R
Sbjct: 69  KYPIEHGIITNWDDMEKIWHHTFYNELRVAPE---EHPVLLTEAPLNPKSNR 117


>AY578811-1|AAT07316.1|  565|Anopheles gambiae thickveins protein.
          Length = 565

 Score = 31.5 bits (68), Expect = 0.024
 Identities = 14/41 (34%), Positives = 23/41 (56%)
 Frame = +1

Query: 241 GSYQCRVGWSISEEPHLIFKNLIARPRKDRCKKDAEPPVTP 363
           G  QC+VG   +  P L  K+++    +D C +D +PP +P
Sbjct: 128 GLLQCKVG---TVSPQLHGKSIVCCDNEDLCNQDLQPPYSP 165


>AF543192-1|AAN40409.1|  636|Anopheles gambiae amino acid
           transporter Ag_AAT8 protein.
          Length = 636

 Score = 24.6 bits (51), Expect = 2.7
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = -3

Query: 405 YCFYIYYVIAYLNGWRYRWFGIFFAPIF 322
           Y  Y+Y  +AY  GW    FG+   PI+
Sbjct: 564 YRQYVYPTVAYGIGWCIFAFGLLQLPIW 591


>DQ989011-1|ABK97612.1|  467|Anopheles gambiae gustatory receptor 22
           protein.
          Length = 467

 Score = 24.2 bits (50), Expect = 3.6
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -3

Query: 405 YCFYIYYVIAYLNGWRYRWF 346
           + F  Y++IA LNG+   WF
Sbjct: 232 HTFAYYHIIAMLNGFCSLWF 251


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 599,223
Number of Sequences: 2352
Number of extensions: 10772
Number of successful extensions: 33
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 63559560
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)