Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc13a17
         (644 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    30   0.017
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    30   0.017
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    23   1.9  
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          23   3.3  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      23   3.3  
AF134821-1|AAD40236.1|  226|Apis mellifera hexamerin protein.          23   3.3  

>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 30.3 bits (65), Expect = 0.017
 Identities = 17/62 (27%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
 Frame = +2

Query: 434 KNVVTHFEVQEQVCDYIFSHLGIDSEGA-VNHPIVMTEAFVTPNYSRAIDVRTFI*RLWY 610
           KNV+   E + ++ D+ F    +   G+ V  P+ M    ++ +Y  ++DV  F    WY
Sbjct: 726 KNVLLDIENRAKLTDFGFCITEVMMLGSIVGTPVHMAPELLSGHYDSSVDVYAFGILFWY 785

Query: 611 SC 616
            C
Sbjct: 786 LC 787


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 30.3 bits (65), Expect = 0.017
 Identities = 17/62 (27%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
 Frame = +2

Query: 434 KNVVTHFEVQEQVCDYIFSHLGIDSEGA-VNHPIVMTEAFVTPNYSRAIDVRTFI*RLWY 610
           KNV+   E + ++ D+ F    +   G+ V  P+ M    ++ +Y  ++DV  F    WY
Sbjct: 764 KNVLLDIENRAKLTDFGFCITEVMMLGSIVGTPVHMAPELLSGHYDSSVDVYAFGILFWY 823

Query: 611 SC 616
            C
Sbjct: 824 LC 825


>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
            protein.
          Length = 1308

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = -3

Query: 639  ENPHHSLQQEYHSLQIKVLTS 577
            ++PH   QQ+   +  KVLTS
Sbjct: 1100 QSPHQQQQQQQQKILAKVLTS 1120


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = +1

Query: 148 IIFKDYKTVPDVVHEYSPTL 207
           + F  YKT+ D  H+Y   L
Sbjct: 416 VFFSIYKTILDYYHKYKENL 435


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = +1

Query: 148 IIFKDYKTVPDVVHEYSPTL 207
           + F  YKT+ D  H+Y   L
Sbjct: 416 VFFSIYKTILDYYHKYKENL 435


>AF134821-1|AAD40236.1|  226|Apis mellifera hexamerin protein.
          Length = 226

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = +1

Query: 148 IIFKDYKTVPDVVHEYSPTL 207
           + F  YKT+ D  H+Y   L
Sbjct: 42  VFFSIYKTILDYYHKYKENL 61


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 161,992
Number of Sequences: 438
Number of extensions: 3487
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19438227
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)