Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc13a11
         (751 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    23   2.6  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    23   2.6  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    23   2.6  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    23   2.6  
AM712903-1|CAN84642.1|  148|Tribolium castaneum hypothetical pro...    23   2.6  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    23   3.4  
AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    22   4.6  

>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 7/28 (25%), Positives = 17/28 (60%)
 Frame = -2

Query: 579 FTIGVEITTKYRAHVFAEH*CRMIFRGF 496
           + + + I   Y A++F +  C+++ +GF
Sbjct: 379 YVLLINIFASYFAYIFGKFACKIMIQGF 406


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 7/28 (25%), Positives = 17/28 (60%)
 Frame = -2

Query: 579 FTIGVEITTKYRAHVFAEH*CRMIFRGF 496
           + + + I   Y A++F +  C+++ +GF
Sbjct: 379 YVLLINIFASYFAYIFGKFACKIMIQGF 406


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 7/28 (25%), Positives = 17/28 (60%)
 Frame = -2

Query: 579 FTIGVEITTKYRAHVFAEH*CRMIFRGF 496
           + + + I   Y A++F +  C+++ +GF
Sbjct: 379 YVLLINIFASYFAYIFGKFACKIMIQGF 406


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 7/28 (25%), Positives = 17/28 (60%)
 Frame = -2

Query: 579 FTIGVEITTKYRAHVFAEH*CRMIFRGF 496
           + + + I   Y A++F +  C+++ +GF
Sbjct: 379 YVLLINIFASYFAYIFGKFACKIMIQGF 406


>AM712903-1|CAN84642.1|  148|Tribolium castaneum hypothetical
           protein protein.
          Length = 148

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 8/32 (25%), Positives = 18/32 (56%)
 Frame = +1

Query: 37  LDPIYSFVKLFSILNNLKLAIFNHNIIKLIVY 132
           L+ +YS  ++   + + +  ++ HN +K I Y
Sbjct: 109 LNSLYSSYEITRFIRSRETDVYTHNFVKDIFY 140


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = +1

Query: 64  LFSILNNLKLAIFNHNIIK 120
           LF  L NL++  F+HN ++
Sbjct: 315 LFRFLGNLRIVDFSHNRLR 333


>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 9/15 (60%), Positives = 13/15 (86%)
 Frame = -3

Query: 104 LKIASFRLFKIENNL 60
           L+I + RLFKI+N+L
Sbjct: 199 LEITACRLFKIDNSL 213


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 165,920
Number of Sequences: 336
Number of extensions: 3366
Number of successful extensions: 17
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20027417
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)