Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc13a09
         (506 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY051518-1|AAK92942.1|  478|Drosophila melanogaster GH17311p pro...    68   6e-12
AE014298-1225|AAF46409.1|  478|Drosophila melanogaster CG1785-PA...    68   6e-12

>AY051518-1|AAK92942.1|  478|Drosophila melanogaster GH17311p
           protein.
          Length = 478

 Score = 68.1 bits (159), Expect = 6e-12
 Identities = 38/92 (41%), Positives = 55/92 (59%)
 Frame = +2

Query: 113 AWRKHCDIKDVENFLEDQRLEERLGKFETKPDSEIFIIDTGGDGIKTEDKDIKPISLKKL 292
           AWRK  DI+DVE FLEDQR EER+G F  K D ++F++D+     K        +S+K+ 
Sbjct: 20  AWRK-TDIQDVEQFLEDQRQEERVGTFADKQDEDLFVVDSSLPKTKA-----TVLSVKQK 73

Query: 293 RRSKLGEFPKCFEILLPDSKVQDPNTKRNTIK 388
           R+    +  + ++ L   SKVQDP  KRN ++
Sbjct: 74  RKLNAKKPMRSYQALENTSKVQDPIAKRNHVR 105


>AE014298-1225|AAF46409.1|  478|Drosophila melanogaster CG1785-PA
           protein.
          Length = 478

 Score = 68.1 bits (159), Expect = 6e-12
 Identities = 38/92 (41%), Positives = 55/92 (59%)
 Frame = +2

Query: 113 AWRKHCDIKDVENFLEDQRLEERLGKFETKPDSEIFIIDTGGDGIKTEDKDIKPISLKKL 292
           AWRK  DI+DVE FLEDQR EER+G F  K D ++F++D+     K        +S+K+ 
Sbjct: 20  AWRK-TDIQDVEQFLEDQRQEERVGTFADKQDEDLFVVDSSLPKTKA-----TVLSVKQK 73

Query: 293 RRSKLGEFPKCFEILLPDSKVQDPNTKRNTIK 388
           R+    +  + ++ L   SKVQDP  KRN ++
Sbjct: 74  RKLNAKKPMRSYQALENTSKVQDPIAKRNHVR 105


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,307,291
Number of Sequences: 53049
Number of extensions: 292936
Number of successful extensions: 788
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 720
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 786
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1825511424
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)