Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc13a05
         (728 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF487534-1|AAL93295.1|  509|Anopheles gambiae cytochrome P450 CY...    31   0.028
AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.    29   0.11 
AF020870-1|AAC31873.1|  692|Anopheles gambiae hexamerin A protein.     25   1.8  
AY545988-1|AAS99341.1|  423|Anopheles gambiae carboxypeptidase B...    24   5.5  
AJ627286-1|CAF28572.1|  423|Anopheles gambiae carboxypeptidase B...    24   5.5  
EU068741-1|ABU40241.1|  993|Anopheles gambiae anion exchanger pr...    23   9.7  
AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal ion/p...    23   9.7  
AJ439353-11|CAD27933.1|  615|Anopheles gambiae 30E5.11 protein.        23   9.7  

>AF487534-1|AAL93295.1|  509|Anopheles gambiae cytochrome P450
           CYP6P3 protein.
          Length = 509

 Score = 31.5 bits (68), Expect = 0.028
 Identities = 19/64 (29%), Positives = 32/64 (50%)
 Frame = +2

Query: 125 ISYEDQQKINKFARLNAKVDDYKDELKVKQNDVKNLEEAVEELSLADDSEKIPYLIGEIF 304
           I+Y D ++   F  +  +  DY++   VK+ND  NL   ++     DDS+      GE+ 
Sbjct: 241 ITYNDVERF--FLDIVKETVDYREANNVKRNDFMNLMLQIKNKGKLDDSDDGSLGKGEVG 298

Query: 305 ICQN 316
           + QN
Sbjct: 299 MTQN 302


>AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.
          Length = 1201

 Score = 29.5 bits (63), Expect = 0.11
 Identities = 18/74 (24%), Positives = 34/74 (45%)
 Frame = +2

Query: 140 QQKINKFARLNAKVDDYKDELKVKQNDVKNLEEAVEELSLADDSEKIPYLIGEIFICQNL 319
           ++ +N       K++   + L+  ++ +K LEE  EELS     +K    +  +     L
Sbjct: 173 EESMNLLRESEGKLEKISEYLRTIEDRLKTLEEEKEELSEYQKWDKARRTLEYVIYETEL 232

Query: 320 EITLKNLEEAKAKK 361
           + T K LEE   ++
Sbjct: 233 KETRKQLEELDGQR 246



 Score = 23.0 bits (47), Expect = 9.7
 Identities = 13/47 (27%), Positives = 25/47 (53%), Gaps = 4/47 (8%)
 Frame = +2

Query: 194 DELKVKQNDVKNLEEAVEELSLADDSEK----IPYLIGEIFICQNLE 322
           + L+VK +D     +++  +S     E+    + Y+ G+  IC+NLE
Sbjct: 592 NRLQVKIHDYPEDPDSIPMISKLKYEEQYDKALRYIFGKTLICRNLE 638


>AF020870-1|AAC31873.1|  692|Anopheles gambiae hexamerin A protein.
          Length = 692

 Score = 25.4 bits (53), Expect = 1.8
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = +1

Query: 280 PLPYW*NFYLSEFGNYFEKS*G 345
           P+ Y+ NFY  E+ NY+ +  G
Sbjct: 209 PMDYYNNFYTEEYLNYYTEDIG 230


>AY545988-1|AAS99341.1|  423|Anopheles gambiae carboxypeptidase B
           precursor protein.
          Length = 423

 Score = 23.8 bits (49), Expect = 5.5
 Identities = 14/49 (28%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
 Frame = +2

Query: 116 DVHISYEDQQKINKFARLNAKVDDYKD-ELKVKQNDVKN--LEEAVEEL 253
           ++ + + D  K+ + ARL    +D+K  E  ++Q+D++   + E V+EL
Sbjct: 49  EIEVDFWDAPKVGRSARLMVTREDHKRVEEFLEQHDIEYDLVAEDVQEL 97


>AJ627286-1|CAF28572.1|  423|Anopheles gambiae carboxypeptidase B
           protein.
          Length = 423

 Score = 23.8 bits (49), Expect = 5.5
 Identities = 14/49 (28%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
 Frame = +2

Query: 116 DVHISYEDQQKINKFARLNAKVDDYKD-ELKVKQNDVKN--LEEAVEEL 253
           ++ + + D  K+ + ARL    +D+K  E  ++Q+D++   + E V+EL
Sbjct: 49  EIEVDFWDAPKVGRSARLMVTREDHKRVEEFLEQHDIEYDLVAEDVQEL 97


>EU068741-1|ABU40241.1|  993|Anopheles gambiae anion exchanger
           protein.
          Length = 993

 Score = 23.0 bits (47), Expect = 9.7
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +1

Query: 556 NNYCYSKHCFFYTIRIYV 609
           N +C S    F T+R+YV
Sbjct: 518 NQFCISNDFNFLTVRVYV 535


>AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal
           ion/proton exchanger 3 protein.
          Length = 1221

 Score = 23.0 bits (47), Expect = 9.7
 Identities = 9/29 (31%), Positives = 18/29 (62%)
 Frame = -1

Query: 476 PHFPS*CGYQIFHTSVLSSHSFVILVPHI 390
           P     C Y +F +++LS ++FV+  P++
Sbjct: 120 PRLSRLCIYVVFCSALLSHNAFVLARPNL 148


>AJ439353-11|CAD27933.1|  615|Anopheles gambiae 30E5.11 protein.
          Length = 615

 Score = 23.0 bits (47), Expect = 9.7
 Identities = 20/92 (21%), Positives = 44/92 (47%), Gaps = 4/92 (4%)
 Frame = +2

Query: 176 KVDDYKDELKVKQNDVKNLEEAVEELSLADDSEKIPYLIGEIFICQNLE-ITLKNLEEAK 352
           + D+YK ELK      + L+   ++  +A++ + +  + GE+   Q  +   L+  +E +
Sbjct: 244 RFDNYKRELKETMIRNQQLQRQRKQELIAEEQQSLEVIEGEMRRQQEQDRAALEASKEMR 303

Query: 353 AKK-IHEIHDLEEKCEELK--SQMSDLKAHLY 439
            K  +  I   E++   L+  S++ D    +Y
Sbjct: 304 RKNALEAIRMAEDRRTRLRRESEIEDALLQIY 335


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 583,604
Number of Sequences: 2352
Number of extensions: 10081
Number of successful extensions: 14
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 74428737
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)