Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc13a02
         (688 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014134-2367|AAZ66463.1|  178|Drosophila melanogaster CG33643-P...    32   0.85 
DQ465527-1|ABF00987.1| 2501|Drosophila melanogaster mushroom bod...    29   7.9  
AF209068-1|AAF89163.2| 1871|Drosophila melanogaster Mud protein ...    29   7.9  
AE014298-2023|AAN09584.1| 1871|Drosophila melanogaster CG12047-P...    29   7.9  
AE014298-2022|AAF48362.2| 2328|Drosophila melanogaster CG12047-P...    29   7.9  
AE014298-2021|AAN09583.2| 2520|Drosophila melanogaster CG12047-P...    29   7.9  

>AE014134-2367|AAZ66463.1|  178|Drosophila melanogaster CG33643-PA
           protein.
          Length = 178

 Score = 31.9 bits (69), Expect = 0.85
 Identities = 19/63 (30%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
 Frame = +3

Query: 195 VKKFNFASVLQELNNIKSKIELYEAQVSTCKNVRQIKQNRSSNIKTRIEKQLQFL-TPLN 371
           V KF+  +VL  +     +++LYE ++  C  +  I++NR  NI ++  K+   +  PL 
Sbjct: 66  VGKFDARNVLDFVRPNGQEMKLYEGRLDACLLLGSIQKNRLVNIYSKTFKRFSNVECPLK 125

Query: 372 KNF 380
            NF
Sbjct: 126 ANF 128


>DQ465527-1|ABF00987.1| 2501|Drosophila melanogaster mushroom body
            defect protein protein.
          Length = 2501

 Score = 28.7 bits (61), Expect = 7.9
 Identities = 19/81 (23%), Positives = 39/81 (48%), Gaps = 6/81 (7%)
 Frame = +3

Query: 225  QELNNIKSKIELYEAQVSTCKNVRQIKQNRSSNIKTRIEKQLQFLTPLNKNFITYS-VED 401
            +EL  +KS IE         +  ++  Q    N+K  ++K+ + L  +N  F   + + D
Sbjct: 1321 KELAQVKSVIEAQTKLSDDLQRQKESAQQLVDNLKVELDKERKELAQVNSAFEAQTKLSD 1380

Query: 402  SI-----SSNEVLDNIDLEYD 449
             +     S+ +++DN+ +E D
Sbjct: 1381 DLQRQKESAQQLVDNLKVELD 1401


>AF209068-1|AAF89163.2| 1871|Drosophila melanogaster Mud protein
            protein.
          Length = 1871

 Score = 28.7 bits (61), Expect = 7.9
 Identities = 19/81 (23%), Positives = 39/81 (48%), Gaps = 6/81 (7%)
 Frame = +3

Query: 225  QELNNIKSKIELYEAQVSTCKNVRQIKQNRSSNIKTRIEKQLQFLTPLNKNFITYS-VED 401
            +EL  +KS IE         +  ++  Q    N+K  ++K+ + L  +N  F   + + D
Sbjct: 1237 KELAQVKSVIEAQTKLSDDLQREKESAQQLVDNLKVELDKERKELAQVNSAFEAQTKLSD 1296

Query: 402  SI-----SSNEVLDNIDLEYD 449
             +     S+ +++DN+ +E D
Sbjct: 1297 DLQREKESAQQLVDNLKVELD 1317



 Score = 28.7 bits (61), Expect = 7.9
 Identities = 19/81 (23%), Positives = 39/81 (48%), Gaps = 6/81 (7%)
 Frame = +3

Query: 225  QELNNIKSKIELYEAQVSTCKNVRQIKQNRSSNIKTRIEKQLQFLTPLNKNFITYS-VED 401
            +EL  +KS IE         +  ++  Q    N+K  ++K+ + L  +N  F   + + D
Sbjct: 1363 KELAKVKSVIEAQTKLSDDLQRQKESAQQLVDNLKVELDKERKELAQVNSAFEAQTKLSD 1422

Query: 402  SI-----SSNEVLDNIDLEYD 449
             +     S+ +++DN+ +E D
Sbjct: 1423 DLQRQKESAQQLVDNLKVELD 1443


>AE014298-2023|AAN09584.1| 1871|Drosophila melanogaster CG12047-PC,
            isoform C protein.
          Length = 1871

 Score = 28.7 bits (61), Expect = 7.9
 Identities = 19/81 (23%), Positives = 39/81 (48%), Gaps = 6/81 (7%)
 Frame = +3

Query: 225  QELNNIKSKIELYEAQVSTCKNVRQIKQNRSSNIKTRIEKQLQFLTPLNKNFITYS-VED 401
            +EL  +KS IE         +  ++  Q    N+K  ++K+ + L  +N  F   + + D
Sbjct: 1237 KELAQVKSVIEAQTKLSDDLQREKESAQQLVDNLKVELDKERKELAQVNSAFEAQTKLSD 1296

Query: 402  SI-----SSNEVLDNIDLEYD 449
             +     S+ +++DN+ +E D
Sbjct: 1297 DLQRQKESAQQLVDNLKVELD 1317


>AE014298-2022|AAF48362.2| 2328|Drosophila melanogaster CG12047-PA,
            isoform A protein.
          Length = 2328

 Score = 28.7 bits (61), Expect = 7.9
 Identities = 19/81 (23%), Positives = 39/81 (48%), Gaps = 6/81 (7%)
 Frame = +3

Query: 225  QELNNIKSKIELYEAQVSTCKNVRQIKQNRSSNIKTRIEKQLQFLTPLNKNFITYS-VED 401
            +EL  +KS IE         +  ++  Q    N+K  ++K+ + L  +N  F   + + D
Sbjct: 1237 KELAQVKSVIEAQTKLSDDLQREKESAQQLVDNLKVELDKERKELAQVNSAFEAQTKLSD 1296

Query: 402  SI-----SSNEVLDNIDLEYD 449
             +     S+ +++DN+ +E D
Sbjct: 1297 DLQRQKESAQQLVDNLKVELD 1317


>AE014298-2021|AAN09583.2| 2520|Drosophila melanogaster CG12047-PB,
            isoform B protein.
          Length = 2520

 Score = 28.7 bits (61), Expect = 7.9
 Identities = 19/81 (23%), Positives = 39/81 (48%), Gaps = 6/81 (7%)
 Frame = +3

Query: 225  QELNNIKSKIELYEAQVSTCKNVRQIKQNRSSNIKTRIEKQLQFLTPLNKNFITYS-VED 401
            +EL  +KS IE         +  ++  Q    N+K  ++K+ + L  +N  F   + + D
Sbjct: 1237 KELAQVKSVIEAQTKLSDDLQREKESAQQLVDNLKVELDKERKELAQVNSAFEAQTKLSD 1296

Query: 402  SI-----SSNEVLDNIDLEYD 449
             +     S+ +++DN+ +E D
Sbjct: 1297 DLQRQKESAQQLVDNLKVELD 1317


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,900,265
Number of Sequences: 53049
Number of extensions: 538347
Number of successful extensions: 1674
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1598
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1674
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 3013199100
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)