Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc12p24
(467 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex det... 25 0.40
DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex det... 25 0.54
DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex det... 25 0.54
DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex det... 25 0.54
DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex det... 25 0.54
DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex det... 25 0.54
DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex det... 25 0.54
DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex det... 25 0.54
DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex det... 25 0.54
AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex det... 25 0.54
DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex det... 24 0.94
DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex det... 24 0.94
DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex det... 24 0.94
DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex det... 24 0.94
AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex det... 24 0.94
AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex det... 24 0.94
AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex det... 24 0.94
AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex det... 24 0.94
AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex det... 24 0.94
AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex det... 24 0.94
EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein. 23 2.2
DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex det... 22 2.9
DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex det... 22 2.9
DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex det... 22 2.9
DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex det... 22 2.9
DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex det... 22 3.8
DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex det... 22 3.8
DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex det... 22 3.8
DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex det... 22 3.8
DQ325126-1|ABD14140.1| 174|Apis mellifera complementary sex det... 22 3.8
DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex det... 22 3.8
DQ201783-1|ABB05503.1| 381|Apis mellifera capa receptor-like GP... 21 6.6
AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex det... 21 8.7
>DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 25.0 bits (52), Expect = 0.40
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = +2
Query: 248 NYSLHNFYNNNRKPLKPTTLHDGNIKKSVYENITYVRKL 364
NYS +N YNNN N K +Y NI Y+ ++
Sbjct: 90 NYSNYNNYNNNY----------NNYNKKLYYNINYIEQI 118
>DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 24.6 bits (51), Expect = 0.54
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = +2
Query: 248 NYSLHNFYNNNRKPLKPTTLHDGNIKKSVYENITYVRKL 364
NYS +N YNNN ++ N K +Y NI Y+ ++
Sbjct: 90 NYSNYNNYNNN---------NNYNNYKKLYYNINYIEQI 119
>DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 24.6 bits (51), Expect = 0.54
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = +2
Query: 248 NYSLHNFYNNNRKPLKPTTLHDGNIKKSVYENITYVRKL 364
NYS +N YNNN ++ N K +Y NI Y+ ++
Sbjct: 90 NYSNYNNYNNN---------NNYNNYKKLYYNINYIEQI 119
>DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 24.6 bits (51), Expect = 0.54
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = +2
Query: 248 NYSLHNFYNNNRKPLKPTTLHDGNIKKSVYENITYVRKL 364
NYS +N YNNN ++ N K +Y NI Y+ ++
Sbjct: 90 NYSNYNNYNNN---------NNYNNYKKLYYNINYIEQI 119
>DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 24.6 bits (51), Expect = 0.54
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = +2
Query: 248 NYSLHNFYNNNRKPLKPTTLHDGNIKKSVYENITYVRKL 364
NYS +N YNNN ++ N K +Y NI Y+ ++
Sbjct: 90 NYSNYNNYNNN---------NNYNNYKKLYYNINYIEQI 119
>DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 24.6 bits (51), Expect = 0.54
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = +2
Query: 248 NYSLHNFYNNNRKPLKPTTLHDGNIKKSVYENITYVRKL 364
NYS +N YNNN ++ N K +Y NI Y+ ++
Sbjct: 90 NYSNYNNYNNN---------NNYNNYKKLYYNINYIEQI 119
>DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 24.6 bits (51), Expect = 0.54
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = +2
Query: 248 NYSLHNFYNNNRKPLKPTTLHDGNIKKSVYENITYVRKL 364
NYS +N YNNN ++ N K +Y NI Y+ ++
Sbjct: 90 NYSNYNNYNNN---------NNYNNYKKLYYNINYIEQI 119
>DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 24.6 bits (51), Expect = 0.54
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = +2
Query: 248 NYSLHNFYNNNRKPLKPTTLHDGNIKKSVYENITYVRKL 364
NYS +N YNNN ++ N K +Y NI Y+ ++
Sbjct: 90 NYSNYNNYNNN---------NNYNNYKKLYYNINYIEQI 119
>DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 24.6 bits (51), Expect = 0.54
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = +2
Query: 248 NYSLHNFYNNNRKPLKPTTLHDGNIKKSVYENITYVRKL 364
NYS +N YNNN ++ N K +Y NI Y+ ++
Sbjct: 90 NYSNYNNYNNN---------NNYNNYKKLYYNINYIEQI 119
>AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex
determiner protein.
Length = 425
Score = 24.6 bits (51), Expect = 0.54
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = +2
Query: 245 DNYSLHNFYNNNRKPLKPTTLHDGNIKKSVYENITYVRKL 364
+NY+ +N YNNN ++ N KK +Y NI Y+ ++
Sbjct: 332 NNYNNYNNYNNN---------YNNNYKK-LYYNINYIEQI 361
>DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 23.8 bits (49), Expect = 0.94
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = +2
Query: 245 DNYSLHNFYNNNRKPL 292
+NY+ +N YNNN KPL
Sbjct: 87 NNYNYNN-YNNNYKPL 101
>DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 23.8 bits (49), Expect = 0.94
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = +2
Query: 245 DNYSLHNFYNNNRKPL 292
+NY+ +N YNNN KPL
Sbjct: 87 NNYNYNN-YNNNYKPL 101
>DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 23.8 bits (49), Expect = 0.94
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = +2
Query: 245 DNYSLHNFYNNNRKPL 292
+NY+ +N YNNN KPL
Sbjct: 87 NNYNYNN-YNNNYKPL 101
>DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 23.8 bits (49), Expect = 0.94
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = +2
Query: 245 DNYSLHNFYNNNRKPL 292
+NY+ +N YNNN KPL
Sbjct: 87 NNYNYNN-YNNNYKPL 101
>AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 23.8 bits (49), Expect = 0.94
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = +2
Query: 245 DNYSLHNFYNNNRKPL 292
+NY+ +N YNNN KPL
Sbjct: 320 NNYNYNN-YNNNYKPL 334
>AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 23.8 bits (49), Expect = 0.94
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = +2
Query: 245 DNYSLHNFYNNNRKPL 292
+NY+ +N YNNN KPL
Sbjct: 320 NNYNYNN-YNNNYKPL 334
>AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 23.8 bits (49), Expect = 0.94
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = +2
Query: 245 DNYSLHNFYNNNRKPL 292
+NY+ +N YNNN KPL
Sbjct: 320 NNYNYNN-YNNNYKPL 334
>AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 23.8 bits (49), Expect = 0.94
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = +2
Query: 245 DNYSLHNFYNNNRKPL 292
+NY+ +N YNNN KPL
Sbjct: 320 NNYNYNN-YNNNYKPL 334
>AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 23.8 bits (49), Expect = 0.94
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = +2
Query: 245 DNYSLHNFYNNNRKPL 292
+NY+ +N YNNN KPL
Sbjct: 320 NNYNYNN-YNNNYKPL 334
>AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 23.8 bits (49), Expect = 0.94
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = +2
Query: 245 DNYSLHNFYNNNRKPL 292
+NY+ +N YNNN KPL
Sbjct: 309 NNYNYNN-YNNNYKPL 323
>EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein.
Length = 570
Score = 22.6 bits (46), Expect = 2.2
Identities = 9/28 (32%), Positives = 14/28 (50%)
Frame = +2
Query: 227 CLCCTMDNYSLHNFYNNNRKPLKPTTLH 310
CL + Y L + Y +K + P +LH
Sbjct: 277 CLSTRLFYYQLTDLYKKIKKAVPPLSLH 304
>DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 22.2 bits (45), Expect = 2.9
Identities = 8/17 (47%), Positives = 13/17 (76%)
Frame = +2
Query: 245 DNYSLHNFYNNNRKPLK 295
+NY+ +N+ NNN K L+
Sbjct: 95 NNYNNNNYNNNNYKKLQ 111
>DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 22.2 bits (45), Expect = 2.9
Identities = 8/17 (47%), Positives = 13/17 (76%)
Frame = +2
Query: 245 DNYSLHNFYNNNRKPLK 295
+NY+ +N+ NNN K L+
Sbjct: 95 NNYNNNNYNNNNYKKLQ 111
>DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 22.2 bits (45), Expect = 2.9
Identities = 8/17 (47%), Positives = 13/17 (76%)
Frame = +2
Query: 245 DNYSLHNFYNNNRKPLK 295
+NY+ +N+ NNN K L+
Sbjct: 95 NNYNNNNYNNNNYKKLQ 111
>DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 22.2 bits (45), Expect = 2.9
Identities = 8/17 (47%), Positives = 13/17 (76%)
Frame = +2
Query: 245 DNYSLHNFYNNNRKPLK 295
+NY+ +N+ NNN K L+
Sbjct: 95 NNYNNNNYNNNNYKKLQ 111
>DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.8 bits (44), Expect = 3.8
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = +2
Query: 245 DNYSLHNFYNNNRKPL 292
+NY+ N+ NNN K L
Sbjct: 87 NNYNYSNYNNNNYKQL 102
>DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.8 bits (44), Expect = 3.8
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = +2
Query: 245 DNYSLHNFYNNNRKPL 292
+NY+ N+ NNN K L
Sbjct: 87 NNYNYSNYNNNNYKQL 102
>DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.8 bits (44), Expect = 3.8
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = +2
Query: 245 DNYSLHNFYNNNRKPL 292
+NY+ N+ NNN K L
Sbjct: 87 NNYNYSNYNNNNYKQL 102
>DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.8 bits (44), Expect = 3.8
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = +2
Query: 245 DNYSLHNFYNNNRKPL 292
+NY+ N+ NNN K L
Sbjct: 87 NNYNYSNYNNNNYKQL 102
>DQ325126-1|ABD14140.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.8 bits (44), Expect = 3.8
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = +2
Query: 245 DNYSLHNFYNNNRKPL 292
+NY+ N+ NNN K L
Sbjct: 87 NNYNYSNYNNNNYKQL 102
>DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.8 bits (44), Expect = 3.8
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = +2
Query: 245 DNYSLHNFYNNNRKPL 292
+NY+ N+ NNN K L
Sbjct: 87 NNYNYSNYNNNNYKQL 102
>DQ201783-1|ABB05503.1| 381|Apis mellifera capa receptor-like GPCR
protein.
Length = 381
Score = 21.0 bits (42), Expect = 6.6
Identities = 9/27 (33%), Positives = 14/27 (51%)
Frame = +2
Query: 8 NALCLNMFIITYKNDIIFRLCFTSRII 88
N + N+ I Y+N +C +RII
Sbjct: 324 NPILYNLMSIKYRNAFKQTICCKTRII 350
>AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex
determiner protein.
Length = 419
Score = 20.6 bits (41), Expect = 8.7
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = +2
Query: 248 NYSLHNFYNNN 280
NY+ +N YNNN
Sbjct: 326 NYNNYNNYNNN 336
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 115,959
Number of Sequences: 438
Number of extensions: 2379
Number of successful extensions: 33
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12559158
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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