Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc12p22
(674 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X86446-1|CAA60167.1| 900|Homo sapiens 55.11 protein protein. 158 1e-38
BT009736-1|AAP88738.1| 908|Homo sapiens proteasome (prosome, ma... 158 1e-38
BC007897-1|AAH07897.1| 908|Homo sapiens proteasome (prosome, ma... 158 1e-38
BC002997-1|AAH02997.1| 908|Homo sapiens proteasome (prosome, ma... 158 1e-38
BC002368-1|AAH02368.1| 908|Homo sapiens proteasome (prosome, ma... 158 1e-38
AB209843-1|BAD93080.1| 913|Homo sapiens proteasome 26S non-ATPa... 158 1e-38
D78151-1|BAA11226.1| 908|Homo sapiens human 26S proteasome subu... 157 4e-38
U12596-1|AAA87705.1| 853|Homo sapiens tumor necrosis factor typ... 140 5e-33
>X86446-1|CAA60167.1| 900|Homo sapiens 55.11 protein protein.
Length = 900
Score = 158 bits (384), Expect = 1e-38
Identities = 81/156 (51%), Positives = 110/156 (70%), Gaps = 6/156 (3%)
Frame = +1
Query: 223 SEEDKRLQEELNMLVDKLLGNEVDLYFPALQMLSNLIRTSTTSMTSVPKPLKFLREHYPA 402
SEEDK+LQ+EL MLV++L + LY PAL+ L IR+STTSMTSVPKPLKFLR HY
Sbjct: 37 SEEDKQLQDELEMLVERLGEKDTSLYRPALEELRRQIRSSTTSMTSVPKPLKFLRPHYGK 96
Query: 403 LKQVYEKITDEKTKKFCADVISVLAMGVSGTLEVAEKRECLKYCLLGTLSNVGDWGHEYV 582
LK++YE + + K+F AD+ISVLAM +SG +RECLKY L+G+ + WGHEYV
Sbjct: 97 LKEIYENMAPGENKRFAADIISVLAMTMSG------ERECLKYRLVGSQEELASWGHEYV 150
Query: 583 RQLEGEIAEEW----NIENM--DSLLPLVRDVITFD 672
R L GE+A+EW + E + + LL LV++++ ++
Sbjct: 151 RHLAGEVAKEWQELDDAEKVQREPLLTLVKEIVPYN 186
>BT009736-1|AAP88738.1| 908|Homo sapiens proteasome (prosome,
macropain) 26S subunit, non-ATPase, 2 protein.
Length = 908
Score = 158 bits (384), Expect = 1e-38
Identities = 81/156 (51%), Positives = 110/156 (70%), Gaps = 6/156 (3%)
Frame = +1
Query: 223 SEEDKRLQEELNMLVDKLLGNEVDLYFPALQMLSNLIRTSTTSMTSVPKPLKFLREHYPA 402
SEEDK+LQ+EL MLV++L + LY PAL+ L IR+STTSMTSVPKPLKFLR HY
Sbjct: 46 SEEDKQLQDELEMLVERLGEKDTSLYRPALEELRRQIRSSTTSMTSVPKPLKFLRPHYGK 105
Query: 403 LKQVYEKITDEKTKKFCADVISVLAMGVSGTLEVAEKRECLKYCLLGTLSNVGDWGHEYV 582
LK++YE + + K+F AD+ISVLAM +SG +RECLKY L+G+ + WGHEYV
Sbjct: 106 LKEIYENMAPGENKRFAADIISVLAMTMSG------ERECLKYRLVGSQEELASWGHEYV 159
Query: 583 RQLEGEIAEEW----NIENM--DSLLPLVRDVITFD 672
R L GE+A+EW + E + + LL LV++++ ++
Sbjct: 160 RHLAGEVAKEWQELDDAEKVQREPLLTLVKEIVPYN 195
>BC007897-1|AAH07897.1| 908|Homo sapiens proteasome (prosome,
macropain) 26S subunit, non-ATPase, 2 protein.
Length = 908
Score = 158 bits (384), Expect = 1e-38
Identities = 81/156 (51%), Positives = 110/156 (70%), Gaps = 6/156 (3%)
Frame = +1
Query: 223 SEEDKRLQEELNMLVDKLLGNEVDLYFPALQMLSNLIRTSTTSMTSVPKPLKFLREHYPA 402
SEEDK+LQ+EL MLV++L + LY PAL+ L IR+STTSMTSVPKPLKFLR HY
Sbjct: 46 SEEDKQLQDELEMLVERLGEKDTSLYRPALEELRRQIRSSTTSMTSVPKPLKFLRPHYGK 105
Query: 403 LKQVYEKITDEKTKKFCADVISVLAMGVSGTLEVAEKRECLKYCLLGTLSNVGDWGHEYV 582
LK++YE + + K+F AD+ISVLAM +SG +RECLKY L+G+ + WGHEYV
Sbjct: 106 LKEIYENMAPGENKRFAADIISVLAMTMSG------ERECLKYRLVGSQEELASWGHEYV 159
Query: 583 RQLEGEIAEEW----NIENM--DSLLPLVRDVITFD 672
R L GE+A+EW + E + + LL LV++++ ++
Sbjct: 160 RHLAGEVAKEWQELDDAEKVQREPLLTLVKEIVPYN 195
>BC002997-1|AAH02997.1| 908|Homo sapiens proteasome (prosome,
macropain) 26S subunit, non-ATPase, 2 protein.
Length = 908
Score = 158 bits (384), Expect = 1e-38
Identities = 81/156 (51%), Positives = 110/156 (70%), Gaps = 6/156 (3%)
Frame = +1
Query: 223 SEEDKRLQEELNMLVDKLLGNEVDLYFPALQMLSNLIRTSTTSMTSVPKPLKFLREHYPA 402
SEEDK+LQ+EL MLV++L + LY PAL+ L IR+STTSMTSVPKPLKFLR HY
Sbjct: 46 SEEDKQLQDELEMLVERLGEKDTSLYRPALEELRRQIRSSTTSMTSVPKPLKFLRPHYGK 105
Query: 403 LKQVYEKITDEKTKKFCADVISVLAMGVSGTLEVAEKRECLKYCLLGTLSNVGDWGHEYV 582
LK++YE + + K+F AD+ISVLAM +SG +RECLKY L+G+ + WGHEYV
Sbjct: 106 LKEIYENMAPGENKRFAADIISVLAMTMSG------ERECLKYRLVGSQEELASWGHEYV 159
Query: 583 RQLEGEIAEEW----NIENM--DSLLPLVRDVITFD 672
R L GE+A+EW + E + + LL LV++++ ++
Sbjct: 160 RHLAGEVAKEWQELDDAEKVQREPLLTLVKEIVPYN 195
>BC002368-1|AAH02368.1| 908|Homo sapiens proteasome (prosome,
macropain) 26S subunit, non-ATPase, 2 protein.
Length = 908
Score = 158 bits (384), Expect = 1e-38
Identities = 81/156 (51%), Positives = 110/156 (70%), Gaps = 6/156 (3%)
Frame = +1
Query: 223 SEEDKRLQEELNMLVDKLLGNEVDLYFPALQMLSNLIRTSTTSMTSVPKPLKFLREHYPA 402
SEEDK+LQ+EL MLV++L + LY PAL+ L IR+STTSMTSVPKPLKFLR HY
Sbjct: 46 SEEDKQLQDELEMLVERLGEKDTSLYRPALEELRRQIRSSTTSMTSVPKPLKFLRPHYGK 105
Query: 403 LKQVYEKITDEKTKKFCADVISVLAMGVSGTLEVAEKRECLKYCLLGTLSNVGDWGHEYV 582
LK++YE + + K+F AD+ISVLAM +SG +RECLKY L+G+ + WGHEYV
Sbjct: 106 LKEIYENMAPGENKRFAADIISVLAMTMSG------ERECLKYRLVGSQEELASWGHEYV 159
Query: 583 RQLEGEIAEEW----NIENM--DSLLPLVRDVITFD 672
R L GE+A+EW + E + + LL LV++++ ++
Sbjct: 160 RHLAGEVAKEWQELDDAEKVQREPLLTLVKEIVPYN 195
>AB209843-1|BAD93080.1| 913|Homo sapiens proteasome 26S non-ATPase
subunit 2 variant protein.
Length = 913
Score = 158 bits (384), Expect = 1e-38
Identities = 81/156 (51%), Positives = 110/156 (70%), Gaps = 6/156 (3%)
Frame = +1
Query: 223 SEEDKRLQEELNMLVDKLLGNEVDLYFPALQMLSNLIRTSTTSMTSVPKPLKFLREHYPA 402
SEEDK+LQ+EL MLV++L + LY PAL+ L IR+STTSMTSVPKPLKFLR HY
Sbjct: 51 SEEDKQLQDELEMLVERLGEKDTSLYRPALEELRRQIRSSTTSMTSVPKPLKFLRPHYGK 110
Query: 403 LKQVYEKITDEKTKKFCADVISVLAMGVSGTLEVAEKRECLKYCLLGTLSNVGDWGHEYV 582
LK++YE + + K+F AD+ISVLAM +SG +RECLKY L+G+ + WGHEYV
Sbjct: 111 LKEIYENMAPGENKRFAADIISVLAMTMSG------ERECLKYRLVGSQEELASWGHEYV 164
Query: 583 RQLEGEIAEEW----NIENM--DSLLPLVRDVITFD 672
R L GE+A+EW + E + + LL LV++++ ++
Sbjct: 165 RHLAGEVAKEWQELDDAEKVQREPLLTLVKEIVPYN 200
>D78151-1|BAA11226.1| 908|Homo sapiens human 26S proteasome subunit
p97 protein.
Length = 908
Score = 157 bits (380), Expect = 4e-38
Identities = 80/156 (51%), Positives = 109/156 (69%), Gaps = 6/156 (3%)
Frame = +1
Query: 223 SEEDKRLQEELNMLVDKLLGNEVDLYFPALQMLSNLIRTSTTSMTSVPKPLKFLREHYPA 402
SEEDK+LQ+EL ML ++L + LY PAL+ L IR+STTSMTSVPKPLKFLR HY
Sbjct: 46 SEEDKQLQDELEMLAERLGEKDTSLYRPALEELRRQIRSSTTSMTSVPKPLKFLRPHYGK 105
Query: 403 LKQVYEKITDEKTKKFCADVISVLAMGVSGTLEVAEKRECLKYCLLGTLSNVGDWGHEYV 582
LK++YE + + K+F AD+ISVLAM +SG +RECLKY L+G+ + WGHEYV
Sbjct: 106 LKEIYENMAPGENKRFAADIISVLAMTMSG------ERECLKYRLVGSQEELASWGHEYV 159
Query: 583 RQLEGEIAEEW----NIENM--DSLLPLVRDVITFD 672
R L GE+A+EW + E + + LL LV++++ ++
Sbjct: 160 RHLAGEVAKEWQELDDAEKVQREPLLTLVKEIVPYN 195
>U12596-1|AAA87705.1| 853|Homo sapiens tumor necrosis factor type 1
receptor associated protein protein.
Length = 853
Score = 140 bits (338), Expect = 5e-33
Identities = 72/144 (50%), Positives = 99/144 (68%), Gaps = 6/144 (4%)
Frame = +1
Query: 259 MLVDKLLGNEVDLYFPALQMLSNLIRTSTTSMTSVPKPLKFLREHYPALKQVYEKITDEK 438
MLV++L + LY PAL+ L IR+STTSMTSVPKPLKFLR HY LK++YE + +
Sbjct: 1 MLVERLGEKDTSLYRPALEELRRQIRSSTTSMTSVPKPLKFLRPHYGKLKEIYENMAPGE 60
Query: 439 TKKFCADVISVLAMGVSGTLEVAEKRECLKYCLLGTLSNVGDWGHEYVRQLEGEIAEEW- 615
K+F AD+ISVLAM +SG +RECLKY L+G+ + WGHEYVR L GE+A+EW
Sbjct: 61 NKRFAADIISVLAMTMSG------ERECLKYRLVGSQEELASWGHEYVRHLAGEVAKEWQ 114
Query: 616 ---NIENM--DSLLPLVRDVITFD 672
+ E + + LL LV++++ ++
Sbjct: 115 ELDDAEKVQREPLLTLVKEIVPYN 138
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 93,865,206
Number of Sequences: 237096
Number of extensions: 1912230
Number of successful extensions: 4409
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 4209
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4401
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7615267504
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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