Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc12p22
         (674 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF145304-1|AAF08385.1|  919|Drosophila melanogaster 26S proteaso...   134   8e-32
AF132182-1|AAD34770.1|  919|Drosophila melanogaster unknown prot...   134   8e-32
AE014296-3245|AAF49095.2|  919|Drosophila melanogaster CG7762-PA...   134   8e-32
BT003439-1|AAO39442.1|  366|Drosophila melanogaster RH73632p pro...    31   1.9  
BT001432-1|AAN71187.1|  367|Drosophila melanogaster GH19412p pro...    31   1.9  
AY071085-1|AAL48707.1|  366|Drosophila melanogaster RE15265p pro...    31   1.9  
AE014296-2124|AAF49935.1|  367|Drosophila melanogaster CG4300-PA...    31   1.9  
AE014296-2123|AAF49934.1|  366|Drosophila melanogaster CG4300-PB...    31   1.9  
BT010295-1|AAQ23613.1|  661|Drosophila melanogaster LD16058p pro...    30   3.3  
AF416603-1|AAL11905.1|  661|Drosophila melanogaster ribbon protein.    30   3.3  
AE013599-2846|AAF57588.1|  661|Drosophila melanogaster CG7230-PA...    30   3.3  
AE014297-2429|AAX52961.1|  490|Drosophila melanogaster CG31243-P...    29   5.8  
AE014297-2428|AAX52960.1|  535|Drosophila melanogaster CG31243-P...    29   5.8  
AE014297-2427|AAN13754.4|  615|Drosophila melanogaster CG31243-P...    29   5.8  
AE014297-2426|AAF55484.5|  615|Drosophila melanogaster CG31243-P...    29   5.8  
AE014297-2425|AAF55485.5|  615|Drosophila melanogaster CG31243-P...    29   5.8  
AE014297-2424|AAF55483.5|  738|Drosophila melanogaster CG31243-P...    29   5.8  

>AF145304-1|AAF08385.1|  919|Drosophila melanogaster 26S proteasome
           regulatory complexsubunit p97 protein.
          Length = 919

 Score =  134 bits (325), Expect = 8e-32
 Identities = 69/154 (44%), Positives = 99/154 (64%), Gaps = 4/154 (2%)
 Frame = +1

Query: 223 SEEDKRLQEELNMLVDKLLGNEVDLYFPALQMLSNLIRTSTTSMTSVPKPLKFLREHYPA 402
           S+ED++LQEEL +LV  L   +  LY P L+ ++ LIR STTSMTSVPKPLKF+R HY  
Sbjct: 44  SDEDQQLQEELELLVQHLQEPDAKLYQPTLESMAKLIRASTTSMTSVPKPLKFMRPHYET 103

Query: 403 LKQVYEKITDEKTKKFCADVISVLAMGVSGTLEVAEKRECLKY-CLLGTLSNVGDWGHEY 579
           +K VY+ + +E+ ++ CAD+ISVL+M       +   ++CL Y  L      +GDWGHEY
Sbjct: 104 MKTVYKHMPNEQARQLCADIISVLSM------TMGSGKDCLAYRFLCDRKQRIGDWGHEY 157

Query: 580 VRQLEGEIAEEWNIENMD---SLLPLVRDVITFD 672
           VR L GEI+  ++    D    L+ LV+ +I ++
Sbjct: 158 VRHLSGEISAHYHDTTGDFRVQLIELVKQIIPYN 191


>AF132182-1|AAD34770.1|  919|Drosophila melanogaster unknown
           protein.
          Length = 919

 Score =  134 bits (325), Expect = 8e-32
 Identities = 69/154 (44%), Positives = 99/154 (64%), Gaps = 4/154 (2%)
 Frame = +1

Query: 223 SEEDKRLQEELNMLVDKLLGNEVDLYFPALQMLSNLIRTSTTSMTSVPKPLKFLREHYPA 402
           S+ED++LQEEL +LV  L   +  LY P L+ ++ LIR STTSMTSVPKPLKF+R HY  
Sbjct: 44  SDEDQQLQEELELLVQHLQEPDAKLYQPTLESMAKLIRASTTSMTSVPKPLKFMRPHYET 103

Query: 403 LKQVYEKITDEKTKKFCADVISVLAMGVSGTLEVAEKRECLKY-CLLGTLSNVGDWGHEY 579
           +K VY+ + +E+ ++ CAD+ISVL+M       +   ++CL Y  L      +GDWGHEY
Sbjct: 104 MKTVYKHMPNEQARQLCADIISVLSM------TMGSGKDCLAYRFLCDRKQRIGDWGHEY 157

Query: 580 VRQLEGEIAEEWNIENMD---SLLPLVRDVITFD 672
           VR L GEI+  ++    D    L+ LV+ +I ++
Sbjct: 158 VRHLSGEISAHYHDTTGDFRVQLIELVKQIIPYN 191


>AE014296-3245|AAF49095.2|  919|Drosophila melanogaster CG7762-PA
           protein.
          Length = 919

 Score =  134 bits (325), Expect = 8e-32
 Identities = 69/154 (44%), Positives = 99/154 (64%), Gaps = 4/154 (2%)
 Frame = +1

Query: 223 SEEDKRLQEELNMLVDKLLGNEVDLYFPALQMLSNLIRTSTTSMTSVPKPLKFLREHYPA 402
           S+ED++LQEEL +LV  L   +  LY P L+ ++ LIR STTSMTSVPKPLKF+R HY  
Sbjct: 44  SDEDQQLQEELELLVQHLQEPDAKLYQPTLESMAKLIRASTTSMTSVPKPLKFMRPHYET 103

Query: 403 LKQVYEKITDEKTKKFCADVISVLAMGVSGTLEVAEKRECLKY-CLLGTLSNVGDWGHEY 579
           +K VY+ + +E+ ++ CAD+ISVL+M       +   ++CL Y  L      +GDWGHEY
Sbjct: 104 MKTVYKHMPNEQARQLCADIISVLSM------TMGSGKDCLAYRFLCDRKQRIGDWGHEY 157

Query: 580 VRQLEGEIAEEWNIENMD---SLLPLVRDVITFD 672
           VR L GEI+  ++    D    L+ LV+ +I ++
Sbjct: 158 VRHLSGEISAHYHDTTGDFRVQLIELVKQIIPYN 191


>BT003439-1|AAO39442.1|  366|Drosophila melanogaster RH73632p
           protein.
          Length = 366

 Score = 30.7 bits (66), Expect = 1.9
 Identities = 13/33 (39%), Positives = 21/33 (63%)
 Frame = +1

Query: 220 TSEEDKRLQEELNMLVDKLLGNEVDLYFPALQM 318
           T ++DK   EE  + V K+L NE++  FP L++
Sbjct: 11  TLDKDKTADEEARLQVAKILRNELEQLFPQLEL 43


>BT001432-1|AAN71187.1|  367|Drosophila melanogaster GH19412p
           protein.
          Length = 367

 Score = 30.7 bits (66), Expect = 1.9
 Identities = 13/33 (39%), Positives = 21/33 (63%)
 Frame = +1

Query: 220 TSEEDKRLQEELNMLVDKLLGNEVDLYFPALQM 318
           T ++DK   EE  + V K+L NE++  FP L++
Sbjct: 11  TLDKDKTADEEARLQVAKILRNELEQLFPQLEL 43


>AY071085-1|AAL48707.1|  366|Drosophila melanogaster RE15265p
           protein.
          Length = 366

 Score = 30.7 bits (66), Expect = 1.9
 Identities = 13/33 (39%), Positives = 21/33 (63%)
 Frame = +1

Query: 220 TSEEDKRLQEELNMLVDKLLGNEVDLYFPALQM 318
           T ++DK   EE  + V K+L NE++  FP L++
Sbjct: 11  TLDKDKTADEEARLQVAKILRNELEQLFPQLEL 43


>AE014296-2124|AAF49935.1|  367|Drosophila melanogaster CG4300-PA,
           isoform A protein.
          Length = 367

 Score = 30.7 bits (66), Expect = 1.9
 Identities = 13/33 (39%), Positives = 21/33 (63%)
 Frame = +1

Query: 220 TSEEDKRLQEELNMLVDKLLGNEVDLYFPALQM 318
           T ++DK   EE  + V K+L NE++  FP L++
Sbjct: 11  TLDKDKTADEEARLQVAKILRNELEQLFPQLEL 43


>AE014296-2123|AAF49934.1|  366|Drosophila melanogaster CG4300-PB,
           isoform B protein.
          Length = 366

 Score = 30.7 bits (66), Expect = 1.9
 Identities = 13/33 (39%), Positives = 21/33 (63%)
 Frame = +1

Query: 220 TSEEDKRLQEELNMLVDKLLGNEVDLYFPALQM 318
           T ++DK   EE  + V K+L NE++  FP L++
Sbjct: 11  TLDKDKTADEEARLQVAKILRNELEQLFPQLEL 43


>BT010295-1|AAQ23613.1|  661|Drosophila melanogaster LD16058p
           protein.
          Length = 661

 Score = 29.9 bits (64), Expect = 3.3
 Identities = 20/67 (29%), Positives = 31/67 (46%), Gaps = 4/67 (5%)
 Frame = -1

Query: 647 SGNNESMFSIFHSSAISPSNCLTYSC--PQSPTFDNVPRRQYFKHSLFSATSRVPL--TP 480
           S +N S   I  S+ ISPS  ++ SC  P  P F   P   ++      + S++P    P
Sbjct: 155 SASNHSSSVISTSTHISPSAAISSSCSPPPPPQFGYQPGYSHYPQQQPMSASQIPAGEAP 214

Query: 479 IAKTEIT 459
           +  T+ T
Sbjct: 215 LTPTQAT 221


>AF416603-1|AAL11905.1|  661|Drosophila melanogaster ribbon protein.
          Length = 661

 Score = 29.9 bits (64), Expect = 3.3
 Identities = 20/67 (29%), Positives = 31/67 (46%), Gaps = 4/67 (5%)
 Frame = -1

Query: 647 SGNNESMFSIFHSSAISPSNCLTYSC--PQSPTFDNVPRRQYFKHSLFSATSRVPL--TP 480
           S +N S   I  S+ ISPS  ++ SC  P  P F   P   ++      + S++P    P
Sbjct: 155 SASNHSSSVISTSTHISPSAAISSSCSPPPPPQFGYQPGYSHYPQQQPMSASQIPAGEAP 214

Query: 479 IAKTEIT 459
           +  T+ T
Sbjct: 215 LTPTQAT 221


>AE013599-2846|AAF57588.1|  661|Drosophila melanogaster CG7230-PA
           protein.
          Length = 661

 Score = 29.9 bits (64), Expect = 3.3
 Identities = 20/67 (29%), Positives = 31/67 (46%), Gaps = 4/67 (5%)
 Frame = -1

Query: 647 SGNNESMFSIFHSSAISPSNCLTYSC--PQSPTFDNVPRRQYFKHSLFSATSRVPL--TP 480
           S +N S   I  S+ ISPS  ++ SC  P  P F   P   ++      + S++P    P
Sbjct: 155 SASNHSSSVISTSTHISPSAAISSSCSPPPPPQFGYQPGYSHYPQQQPMSASQIPAGEAP 214

Query: 479 IAKTEIT 459
           +  T+ T
Sbjct: 215 LTPTQAT 221


>AE014297-2429|AAX52961.1|  490|Drosophila melanogaster CG31243-PH,
           isoform H protein.
          Length = 490

 Score = 29.1 bits (62), Expect = 5.8
 Identities = 20/70 (28%), Positives = 31/70 (44%), Gaps = 1/70 (1%)
 Frame = -1

Query: 659 TSRTSGNNESMFSIFHSSAISPSNCLTYSCPQSP-TFDNVPRRQYFKHSLFSATSRVPLT 483
           +S+ + NN S  S   +SA  P      + P +  +  + P  +   H   SAT+  P T
Sbjct: 304 SSKHNSNNNSNTSAGAASAAVPIATSVAAVPTTGGSLPDSPAHESHSHESNSATASAPTT 363

Query: 482 PIAKTEITSA 453
           P     +TSA
Sbjct: 364 PSPAGSVTSA 373


>AE014297-2428|AAX52960.1|  535|Drosophila melanogaster CG31243-PG,
           isoform G protein.
          Length = 535

 Score = 29.1 bits (62), Expect = 5.8
 Identities = 20/70 (28%), Positives = 31/70 (44%), Gaps = 1/70 (1%)
 Frame = -1

Query: 659 TSRTSGNNESMFSIFHSSAISPSNCLTYSCPQSP-TFDNVPRRQYFKHSLFSATSRVPLT 483
           +S+ + NN S  S   +SA  P      + P +  +  + P  +   H   SAT+  P T
Sbjct: 304 SSKHNSNNNSNTSAGAASAAVPIATSVAAVPTTGGSLPDSPAHESHSHESNSATASAPTT 363

Query: 482 PIAKTEITSA 453
           P     +TSA
Sbjct: 364 PSPAGSVTSA 373


>AE014297-2427|AAN13754.4|  615|Drosophila melanogaster CG31243-PF,
           isoform F protein.
          Length = 615

 Score = 29.1 bits (62), Expect = 5.8
 Identities = 20/70 (28%), Positives = 31/70 (44%), Gaps = 1/70 (1%)
 Frame = -1

Query: 659 TSRTSGNNESMFSIFHSSAISPSNCLTYSCPQSP-TFDNVPRRQYFKHSLFSATSRVPLT 483
           +S+ + NN S  S   +SA  P      + P +  +  + P  +   H   SAT+  P T
Sbjct: 304 SSKHNSNNNSNTSAGAASAAVPIATSVAAVPTTGGSLPDSPAHESHSHESNSATASAPTT 363

Query: 482 PIAKTEITSA 453
           P     +TSA
Sbjct: 364 PSPAGSVTSA 373


>AE014297-2426|AAF55484.5|  615|Drosophila melanogaster CG31243-PB,
           isoform B protein.
          Length = 615

 Score = 29.1 bits (62), Expect = 5.8
 Identities = 20/70 (28%), Positives = 31/70 (44%), Gaps = 1/70 (1%)
 Frame = -1

Query: 659 TSRTSGNNESMFSIFHSSAISPSNCLTYSCPQSP-TFDNVPRRQYFKHSLFSATSRVPLT 483
           +S+ + NN S  S   +SA  P      + P +  +  + P  +   H   SAT+  P T
Sbjct: 304 SSKHNSNNNSNTSAGAASAAVPIATSVAAVPTTGGSLPDSPAHESHSHESNSATASAPTT 363

Query: 482 PIAKTEITSA 453
           P     +TSA
Sbjct: 364 PSPAGSVTSA 373


>AE014297-2425|AAF55485.5|  615|Drosophila melanogaster CG31243-PA,
           isoform A protein.
          Length = 615

 Score = 29.1 bits (62), Expect = 5.8
 Identities = 20/70 (28%), Positives = 31/70 (44%), Gaps = 1/70 (1%)
 Frame = -1

Query: 659 TSRTSGNNESMFSIFHSSAISPSNCLTYSCPQSP-TFDNVPRRQYFKHSLFSATSRVPLT 483
           +S+ + NN S  S   +SA  P      + P +  +  + P  +   H   SAT+  P T
Sbjct: 304 SSKHNSNNNSNTSAGAASAAVPIATSVAAVPTTGGSLPDSPAHESHSHESNSATASAPTT 363

Query: 482 PIAKTEITSA 453
           P     +TSA
Sbjct: 364 PSPAGSVTSA 373


>AE014297-2424|AAF55483.5|  738|Drosophila melanogaster CG31243-PE,
           isoform E protein.
          Length = 738

 Score = 29.1 bits (62), Expect = 5.8
 Identities = 20/70 (28%), Positives = 31/70 (44%), Gaps = 1/70 (1%)
 Frame = -1

Query: 659 TSRTSGNNESMFSIFHSSAISPSNCLTYSCPQSP-TFDNVPRRQYFKHSLFSATSRVPLT 483
           +S+ + NN S  S   +SA  P      + P +  +  + P  +   H   SAT+  P T
Sbjct: 304 SSKHNSNNNSNTSAGAASAAVPIATSVAAVPTTGGSLPDSPAHESHSHESNSATASAPTT 363

Query: 482 PIAKTEITSA 453
           P     +TSA
Sbjct: 364 PSPAGSVTSA 373


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,366,577
Number of Sequences: 53049
Number of extensions: 591335
Number of successful extensions: 1947
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1865
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1943
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2930645700
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)