Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc12p09
         (745 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U10438-7|AAA19091.1|  251|Caenorhabditis elegans Hypothetical pr...   186   1e-47
Z81064-1|CAB02962.2|  655|Caenorhabditis elegans Hypothetical pr...    31   0.65 
Z93387-1|CAB07651.1|  376|Caenorhabditis elegans Hypothetical pr...    31   1.1  
AL110484-28|CAB54395.2|  419|Caenorhabditis elegans Hypothetical...    29   2.6  
U64598-4|AAN72420.1|  418|Caenorhabditis elegans Hypothetical pr...    29   4.6  
U64598-3|AAK39213.1|  432|Caenorhabditis elegans Hypothetical pr...    29   4.6  

>U10438-7|AAA19091.1|  251|Caenorhabditis elegans Hypothetical
           protein B0280.3 protein.
          Length = 251

 Score =  186 bits (454), Expect = 1e-47
 Identities = 92/182 (50%), Positives = 118/182 (64%), Gaps = 3/182 (1%)
 Frame = +2

Query: 164 SGSTVVYAVQRLAERVESEKLK-VTCIPTSFQAKQLIIKHGLNLGELETNPNIDVTIDGA 340
           SGSTV Y V+ L +  ++  LK + C+PTSF  KQ +I+ GL + +L+++P +DV IDGA
Sbjct: 40  SGSTVKYLVEYLKQGFQNGSLKDIICVPTSFLTKQWLIESGLPVSDLDSHPELDVCIDGA 99

Query: 341 DEVDSNMTLIKGGGGCLLQEKIIASCSKKLIVIADYTKDSVKLGDRYKKGVPIEVIPMAY 520
           DEVD   T IKGGGGCL QEKI+ + +K   VIADY KDS  LGDRY   VPIEV+P+A 
Sbjct: 100 DEVDGQFTCIKGGGGCLAQEKIVQTAAKNFYVIADYLKDSKHLGDRY-PNVPIEVLPLAA 158

Query: 521 VPIKNKIISLYGGEIKLRSAVAKAGPVVTDNGNFILDWMFAN--QNLDWEKVNNTIKLIP 694
            P+   I    GG  +LR AV K GP+VTDNGNFI+DW F       DW  +   +   P
Sbjct: 159 QPLLRSIPRAEGGSCQLRQAVKKCGPIVTDNGNFIIDWQFEKNVSGRDWFAIQQRLANTP 218

Query: 695 GV 700
           G+
Sbjct: 219 GI 220


>Z81064-1|CAB02962.2|  655|Caenorhabditis elegans Hypothetical
           protein F16B12.1 protein.
          Length = 655

 Score = 31.5 bits (68), Expect = 0.65
 Identities = 16/37 (43%), Positives = 20/37 (54%)
 Frame = +2

Query: 332 DGADEVDSNMTLIKGGGGCLLQEKIIASCSKKLIVIA 442
           +G  EV  N TL K GG CL   K+     K LI+I+
Sbjct: 466 EGNVEVFVNWTLTKSGGSCLSLMKLSVDVDKPLIIIS 502


>Z93387-1|CAB07651.1|  376|Caenorhabditis elegans Hypothetical
           protein T02E9.1 protein.
          Length = 376

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 26/111 (23%), Positives = 51/111 (45%)
 Frame = -2

Query: 387 HPPPPLISVMFESTSSAPSIVTSIFGFVSSSPRLSPCLIISCFA*KEVGMQVTFSFSDST 208
           +PPPPL+   F  T + P  +  +FG + ++  LS    I+    + +   VT   +   
Sbjct: 10  YPPPPLVGASFAKT-AIPYSICFVFGTLGNTAVLSYVFFIT----RSLKSSVTALGNTFI 64

Query: 207 RSASLCTA*TTVDPLLFSLIT*AVFQFIIIFLDYSDLLLSTHYITQMSTKV 55
              +LC     VD L+   I  ++   I+    + +L+   H++ ++S K+
Sbjct: 65  YIVALC----AVDLLVTVSIPFSLSYMILNNWVFGELVCKIHFMLELSNKM 111


>AL110484-28|CAB54395.2|  419|Caenorhabditis elegans Hypothetical
           protein Y38E10A.4 protein.
          Length = 419

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 14/36 (38%), Positives = 20/36 (55%)
 Frame = -1

Query: 154 SYYLSSISVYNNILRLF*FTTQYSLHYTDVY*SKLT 47
           SY LS+   YN +L+   F+T  +L Y  VY  + T
Sbjct: 330 SYLLSTTGAYNILLKFTDFSTNLNLDYVTVYDGETT 365


>U64598-4|AAN72420.1|  418|Caenorhabditis elegans Hypothetical
           protein C52B9.3b protein.
          Length = 418

 Score = 28.7 bits (61), Expect = 4.6
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = +2

Query: 653 LDWEKVNNTIKLIPGVC*NRFICEHVL 733
           L W  V N +K  P VC + F+CE+ L
Sbjct: 167 LKWSSVMNVVKRFPNVC-SVFVCENPL 192


>U64598-3|AAK39213.1|  432|Caenorhabditis elegans Hypothetical
           protein C52B9.3a protein.
          Length = 432

 Score = 28.7 bits (61), Expect = 4.6
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = +2

Query: 653 LDWEKVNNTIKLIPGVC*NRFICEHVL 733
           L W  V N +K  P VC + F+CE+ L
Sbjct: 181 LKWSSVMNVVKRFPNVC-SVFVCENPL 206


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,344,685
Number of Sequences: 27780
Number of extensions: 345166
Number of successful extensions: 863
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 840
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 861
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1756472266
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)