Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc12p07
(733 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X68836-1|CAA48726.1| 395|Homo sapiens S-adenosylmethionine synt... 308 2e-83
DQ083239-1|AAY85355.1| 395|Homo sapiens methionine adenosyltran... 308 2e-83
BC001854-1|AAH01854.1| 395|Homo sapiens methionine adenosyltran... 308 2e-83
BC001686-1|AAH01686.1| 395|Homo sapiens methionine adenosyltran... 308 2e-83
AC016753-1|AAY24339.1| 395|Homo sapiens unknown protein. 308 2e-83
X69078-1|CAA48822.1| 395|Homo sapiens methionine adenosyltransf... 291 1e-78
D49357-1|BAA08355.1| 395|Homo sapiens S-adenosylmethionine synt... 291 1e-78
BC018359-1|AAH18359.1| 395|Homo sapiens methionine adenosyltran... 291 1e-78
AL359195-2|CAI13695.1| 395|Homo sapiens methionine adenosyltran... 291 1e-78
AL359195-3|CAI13696.1| 145|Homo sapiens methionine adenosyltran... 142 1e-33
AL445209-2|CAI15183.1| 726|Homo sapiens chromosome 13 open read... 33 1.1
AL139319-1|CAH70397.1| 726|Homo sapiens chromosome 13 open read... 33 1.1
AK023511-1|BAB14594.1| 460|Homo sapiens protein ( Homo sapiens ... 33 1.1
BC028352-1|AAH28352.1| 691|Homo sapiens TBC1 domain family, mem... 30 7.4
AK022147-1|BAB13971.1| 674|Homo sapiens protein ( Homo sapiens ... 30 9.8
>X68836-1|CAA48726.1| 395|Homo sapiens S-adenosylmethionine
synthetase protein.
Length = 395
Score = 308 bits (755), Expect = 2e-83
Identities = 144/184 (78%), Positives = 164/184 (89%), Gaps = 1/184 (0%)
Frame = +3
Query: 93 MNGYAKTNG-HSYDMEDGSVFLFTSESVGEGHPDKMCDQISDAILDAHLNQDPDAKVACE 269
MNG + NG H +E+G+ FLFTSESVGEGHPDK+CDQISDA+LDAHL QDPDAKVACE
Sbjct: 1 MNG--QLNGFHEAFIEEGT-FLFTSESVGEGHPDKICDQISDAVLDAHLQQDPDAKVACE 57
Query: 270 TITKTGMVLLCGEITSKANVDYQKVVRETVKHIGYDDSSKGFDYKTCSVMLALDQQSPNI 449
T+ KTGM+LL GEITS+A VDYQKVVRE VKHIGYDDSSKGFDYKTC+V++AL+QQSP+I
Sbjct: 58 TVAKTGMILLAGEITSRAAVDYQKVVREAVKHIGYDDSSKGFDYKTCNVLVALEQQSPDI 117
Query: 450 AAGVHENRNDEEVGAGDQGLMFGYATDETEECMPLTVVLAHKLNQKIAELRRNGEFWWAR 629
A GVH +RN+E++GAGDQGLMFGYATDETEECMPLT+VLAHKLN K+AELRRNG W R
Sbjct: 118 AQGVHLDRNEEDIGAGDQGLMFGYATDETEECMPLTIVLAHKLNAKLAELRRNGTLPWLR 177
Query: 630 PDSK 641
PDSK
Sbjct: 178 PDSK 181
Score = 43.2 bits (97), Expect = 0.001
Identities = 18/32 (56%), Positives = 25/32 (78%)
Frame = +2
Query: 638 KTQVTCEYVFAGGATVPQRVHTVVVSLQHSEK 733
KTQVT +Y+ GA +P RVHT+V+S+QH E+
Sbjct: 181 KTQVTVQYMQDRGAVLPIRVHTIVISVQHDEE 212
>DQ083239-1|AAY85355.1| 395|Homo sapiens methionine
adenosyltransferase II protein.
Length = 395
Score = 308 bits (755), Expect = 2e-83
Identities = 144/184 (78%), Positives = 164/184 (89%), Gaps = 1/184 (0%)
Frame = +3
Query: 93 MNGYAKTNG-HSYDMEDGSVFLFTSESVGEGHPDKMCDQISDAILDAHLNQDPDAKVACE 269
MNG + NG H +E+G+ FLFTSESVGEGHPDK+CDQISDA+LDAHL QDPDAKVACE
Sbjct: 1 MNG--QLNGFHEAFIEEGT-FLFTSESVGEGHPDKICDQISDAVLDAHLQQDPDAKVACE 57
Query: 270 TITKTGMVLLCGEITSKANVDYQKVVRETVKHIGYDDSSKGFDYKTCSVMLALDQQSPNI 449
T+ KTGM+LL GEITS+A VDYQKVVRE VKHIGYDDSSKGFDYKTC+V++AL+QQSP+I
Sbjct: 58 TVAKTGMILLAGEITSRAAVDYQKVVREAVKHIGYDDSSKGFDYKTCNVLVALEQQSPDI 117
Query: 450 AAGVHENRNDEEVGAGDQGLMFGYATDETEECMPLTVVLAHKLNQKIAELRRNGEFWWAR 629
A GVH +RN+E++GAGDQGLMFGYATDETEECMPLT+VLAHKLN K+AELRRNG W R
Sbjct: 118 AQGVHLDRNEEDIGAGDQGLMFGYATDETEECMPLTIVLAHKLNAKLAELRRNGTLPWLR 177
Query: 630 PDSK 641
PDSK
Sbjct: 178 PDSK 181
Score = 43.2 bits (97), Expect = 0.001
Identities = 18/32 (56%), Positives = 25/32 (78%)
Frame = +2
Query: 638 KTQVTCEYVFAGGATVPQRVHTVVVSLQHSEK 733
KTQVT +Y+ GA +P RVHT+V+S+QH E+
Sbjct: 181 KTQVTVQYMQDRGAVLPIRVHTIVISVQHDEE 212
>BC001854-1|AAH01854.1| 395|Homo sapiens methionine
adenosyltransferase II, alpha protein.
Length = 395
Score = 308 bits (755), Expect = 2e-83
Identities = 144/184 (78%), Positives = 164/184 (89%), Gaps = 1/184 (0%)
Frame = +3
Query: 93 MNGYAKTNG-HSYDMEDGSVFLFTSESVGEGHPDKMCDQISDAILDAHLNQDPDAKVACE 269
MNG + NG H +E+G+ FLFTSESVGEGHPDK+CDQISDA+LDAHL QDPDAKVACE
Sbjct: 1 MNG--QLNGFHEAFIEEGT-FLFTSESVGEGHPDKICDQISDAVLDAHLQQDPDAKVACE 57
Query: 270 TITKTGMVLLCGEITSKANVDYQKVVRETVKHIGYDDSSKGFDYKTCSVMLALDQQSPNI 449
T+ KTGM+LL GEITS+A VDYQKVVRE VKHIGYDDSSKGFDYKTC+V++AL+QQSP+I
Sbjct: 58 TVAKTGMILLAGEITSRAAVDYQKVVREAVKHIGYDDSSKGFDYKTCNVLVALEQQSPDI 117
Query: 450 AAGVHENRNDEEVGAGDQGLMFGYATDETEECMPLTVVLAHKLNQKIAELRRNGEFWWAR 629
A GVH +RN+E++GAGDQGLMFGYATDETEECMPLT+VLAHKLN K+AELRRNG W R
Sbjct: 118 AQGVHLDRNEEDIGAGDQGLMFGYATDETEECMPLTIVLAHKLNAKLAELRRNGTLPWLR 177
Query: 630 PDSK 641
PDSK
Sbjct: 178 PDSK 181
Score = 43.2 bits (97), Expect = 0.001
Identities = 18/32 (56%), Positives = 25/32 (78%)
Frame = +2
Query: 638 KTQVTCEYVFAGGATVPQRVHTVVVSLQHSEK 733
KTQVT +Y+ GA +P RVHT+V+S+QH E+
Sbjct: 181 KTQVTVQYMQDRGAVLPIRVHTIVISVQHDEE 212
>BC001686-1|AAH01686.1| 395|Homo sapiens methionine
adenosyltransferase II, alpha protein.
Length = 395
Score = 308 bits (755), Expect = 2e-83
Identities = 144/184 (78%), Positives = 164/184 (89%), Gaps = 1/184 (0%)
Frame = +3
Query: 93 MNGYAKTNG-HSYDMEDGSVFLFTSESVGEGHPDKMCDQISDAILDAHLNQDPDAKVACE 269
MNG + NG H +E+G+ FLFTSESVGEGHPDK+CDQISDA+LDAHL QDPDAKVACE
Sbjct: 1 MNG--QLNGFHEAFIEEGT-FLFTSESVGEGHPDKICDQISDAVLDAHLQQDPDAKVACE 57
Query: 270 TITKTGMVLLCGEITSKANVDYQKVVRETVKHIGYDDSSKGFDYKTCSVMLALDQQSPNI 449
T+ KTGM+LL GEITS+A VDYQKVVRE VKHIGYDDSSKGFDYKTC+V++AL+QQSP+I
Sbjct: 58 TVAKTGMILLAGEITSRAAVDYQKVVREAVKHIGYDDSSKGFDYKTCNVLVALEQQSPDI 117
Query: 450 AAGVHENRNDEEVGAGDQGLMFGYATDETEECMPLTVVLAHKLNQKIAELRRNGEFWWAR 629
A GVH +RN+E++GAGDQGLMFGYATDETEECMPLT+VLAHKLN K+AELRRNG W R
Sbjct: 118 AQGVHLDRNEEDIGAGDQGLMFGYATDETEECMPLTIVLAHKLNAKLAELRRNGTLPWLR 177
Query: 630 PDSK 641
PDSK
Sbjct: 178 PDSK 181
Score = 43.2 bits (97), Expect = 0.001
Identities = 18/32 (56%), Positives = 25/32 (78%)
Frame = +2
Query: 638 KTQVTCEYVFAGGATVPQRVHTVVVSLQHSEK 733
KTQVT +Y+ GA +P RVHT+V+S+QH E+
Sbjct: 181 KTQVTVQYMQDRGAVLPIRVHTIVISVQHDEE 212
>AC016753-1|AAY24339.1| 395|Homo sapiens unknown protein.
Length = 395
Score = 308 bits (755), Expect = 2e-83
Identities = 144/184 (78%), Positives = 164/184 (89%), Gaps = 1/184 (0%)
Frame = +3
Query: 93 MNGYAKTNG-HSYDMEDGSVFLFTSESVGEGHPDKMCDQISDAILDAHLNQDPDAKVACE 269
MNG + NG H +E+G+ FLFTSESVGEGHPDK+CDQISDA+LDAHL QDPDAKVACE
Sbjct: 1 MNG--QLNGFHEAFIEEGT-FLFTSESVGEGHPDKICDQISDAVLDAHLQQDPDAKVACE 57
Query: 270 TITKTGMVLLCGEITSKANVDYQKVVRETVKHIGYDDSSKGFDYKTCSVMLALDQQSPNI 449
T+ KTGM+LL GEITS+A VDYQKVVRE VKHIGYDDSSKGFDYKTC+V++AL+QQSP+I
Sbjct: 58 TVAKTGMILLAGEITSRAAVDYQKVVREAVKHIGYDDSSKGFDYKTCNVLVALEQQSPDI 117
Query: 450 AAGVHENRNDEEVGAGDQGLMFGYATDETEECMPLTVVLAHKLNQKIAELRRNGEFWWAR 629
A GVH +RN+E++GAGDQGLMFGYATDETEECMPLT+VLAHKLN K+AELRRNG W R
Sbjct: 118 AQGVHLDRNEEDIGAGDQGLMFGYATDETEECMPLTIVLAHKLNAKLAELRRNGTLPWLR 177
Query: 630 PDSK 641
PDSK
Sbjct: 178 PDSK 181
Score = 43.2 bits (97), Expect = 0.001
Identities = 18/32 (56%), Positives = 25/32 (78%)
Frame = +2
Query: 638 KTQVTCEYVFAGGATVPQRVHTVVVSLQHSEK 733
KTQVT +Y+ GA +P RVHT+V+S+QH E+
Sbjct: 181 KTQVTVQYMQDRGAVLPIRVHTIVISVQHDEE 212
>X69078-1|CAA48822.1| 395|Homo sapiens methionine
adenosyltransferase protein.
Length = 395
Score = 291 bits (715), Expect = 1e-78
Identities = 130/172 (75%), Positives = 157/172 (91%)
Frame = +3
Query: 126 YDMEDGSVFLFTSESVGEGHPDKMCDQISDAILDAHLNQDPDAKVACETITKTGMVLLCG 305
+ + +G VF+FTSESVGEGHPDK+CDQISDA+LDAHL QDP+AKVACET+ KTGMVLLCG
Sbjct: 11 HSLSEG-VFMFTSESVGEGHPDKICDQISDAVLDAHLKQDPNAKVACETVCKTGMVLLCG 69
Query: 306 EITSKANVDYQKVVRETVKHIGYDDSSKGFDYKTCSVMLALDQQSPNIAAGVHENRNDEE 485
EITS A VDYQ+VVR+T+KHIGYDDS+KGFD+KTC+V++AL+QQSP+IA VH +RN+E+
Sbjct: 70 EITSMAMVDYQRVVRDTIKHIGYDDSAKGFDFKTCNVLVALEQQSPDIAQCVHLDRNEED 129
Query: 486 VGAGDQGLMFGYATDETEECMPLTVVLAHKLNQKIAELRRNGEFWWARPDSK 641
VGAGDQGLMFGYATDETEECMPLT++LAHKLN ++A+LRR+G W RPDSK
Sbjct: 130 VGAGDQGLMFGYATDETEECMPLTIILAHKLNARMADLRRSGLLPWLRPDSK 181
Score = 44.8 bits (101), Expect = 3e-04
Identities = 17/31 (54%), Positives = 25/31 (80%)
Frame = +2
Query: 638 KTQVTCEYVFAGGATVPQRVHTVVVSLQHSE 730
KTQVT +Y+ GA +P R+HT+V+S+QH+E
Sbjct: 181 KTQVTVQYMQDNGAVIPVRIHTIVISVQHNE 211
>D49357-1|BAA08355.1| 395|Homo sapiens S-adenosylmethionine
synthetase protein.
Length = 395
Score = 291 bits (715), Expect = 1e-78
Identities = 130/172 (75%), Positives = 157/172 (91%)
Frame = +3
Query: 126 YDMEDGSVFLFTSESVGEGHPDKMCDQISDAILDAHLNQDPDAKVACETITKTGMVLLCG 305
+ + +G VF+FTSESVGEGHPDK+CDQISDA+LDAHL QDP+AKVACET+ KTGMVLLCG
Sbjct: 11 HSLSEG-VFMFTSESVGEGHPDKICDQISDAVLDAHLKQDPNAKVACETVCKTGMVLLCG 69
Query: 306 EITSKANVDYQKVVRETVKHIGYDDSSKGFDYKTCSVMLALDQQSPNIAAGVHENRNDEE 485
EITS A VDYQ+VVR+T+KHIGYDDS+KGFD+KTC+V++AL+QQSP+IA VH +RN+E+
Sbjct: 70 EITSMAMVDYQRVVRDTIKHIGYDDSAKGFDFKTCNVLVALEQQSPDIAQCVHLDRNEED 129
Query: 486 VGAGDQGLMFGYATDETEECMPLTVVLAHKLNQKIAELRRNGEFWWARPDSK 641
VGAGDQGLMFGYATDETEECMPLT++LAHKLN ++A+LRR+G W RPDSK
Sbjct: 130 VGAGDQGLMFGYATDETEECMPLTIILAHKLNARMADLRRSGLLPWLRPDSK 181
Score = 44.8 bits (101), Expect = 3e-04
Identities = 17/31 (54%), Positives = 25/31 (80%)
Frame = +2
Query: 638 KTQVTCEYVFAGGATVPQRVHTVVVSLQHSE 730
KTQVT +Y+ GA +P R+HT+V+S+QH+E
Sbjct: 181 KTQVTVQYMQDNGAVIPVRIHTIVISVQHNE 211
>BC018359-1|AAH18359.1| 395|Homo sapiens methionine
adenosyltransferase I, alpha protein.
Length = 395
Score = 291 bits (715), Expect = 1e-78
Identities = 130/172 (75%), Positives = 157/172 (91%)
Frame = +3
Query: 126 YDMEDGSVFLFTSESVGEGHPDKMCDQISDAILDAHLNQDPDAKVACETITKTGMVLLCG 305
+ + +G VF+FTSESVGEGHPDK+CDQISDA+LDAHL QDP+AKVACET+ KTGMVLLCG
Sbjct: 11 HSLSEG-VFMFTSESVGEGHPDKICDQISDAVLDAHLKQDPNAKVACETVCKTGMVLLCG 69
Query: 306 EITSKANVDYQKVVRETVKHIGYDDSSKGFDYKTCSVMLALDQQSPNIAAGVHENRNDEE 485
EITS A VDYQ+VVR+T+KHIGYDDS+KGFD+KTC+V++AL+QQSP+IA VH +RN+E+
Sbjct: 70 EITSMAMVDYQRVVRDTIKHIGYDDSAKGFDFKTCNVLVALEQQSPDIAQCVHLDRNEED 129
Query: 486 VGAGDQGLMFGYATDETEECMPLTVVLAHKLNQKIAELRRNGEFWWARPDSK 641
VGAGDQGLMFGYATDETEECMPLT++LAHKLN ++A+LRR+G W RPDSK
Sbjct: 130 VGAGDQGLMFGYATDETEECMPLTIILAHKLNARMADLRRSGLLPWLRPDSK 181
Score = 44.8 bits (101), Expect = 3e-04
Identities = 17/31 (54%), Positives = 25/31 (80%)
Frame = +2
Query: 638 KTQVTCEYVFAGGATVPQRVHTVVVSLQHSE 730
KTQVT +Y+ GA +P R+HT+V+S+QH+E
Sbjct: 181 KTQVTVQYMQDNGAVIPVRIHTIVISVQHNE 211
>AL359195-2|CAI13695.1| 395|Homo sapiens methionine
adenosyltransferase I, alpha protein.
Length = 395
Score = 291 bits (715), Expect = 1e-78
Identities = 130/172 (75%), Positives = 157/172 (91%)
Frame = +3
Query: 126 YDMEDGSVFLFTSESVGEGHPDKMCDQISDAILDAHLNQDPDAKVACETITKTGMVLLCG 305
+ + +G VF+FTSESVGEGHPDK+CDQISDA+LDAHL QDP+AKVACET+ KTGMVLLCG
Sbjct: 11 HSLSEG-VFMFTSESVGEGHPDKICDQISDAVLDAHLKQDPNAKVACETVCKTGMVLLCG 69
Query: 306 EITSKANVDYQKVVRETVKHIGYDDSSKGFDYKTCSVMLALDQQSPNIAAGVHENRNDEE 485
EITS A VDYQ+VVR+T+KHIGYDDS+KGFD+KTC+V++AL+QQSP+IA VH +RN+E+
Sbjct: 70 EITSMAMVDYQRVVRDTIKHIGYDDSAKGFDFKTCNVLVALEQQSPDIAQCVHLDRNEED 129
Query: 486 VGAGDQGLMFGYATDETEECMPLTVVLAHKLNQKIAELRRNGEFWWARPDSK 641
VGAGDQGLMFGYATDETEECMPLT++LAHKLN ++A+LRR+G W RPDSK
Sbjct: 130 VGAGDQGLMFGYATDETEECMPLTIILAHKLNARMADLRRSGLLPWLRPDSK 181
Score = 44.8 bits (101), Expect = 3e-04
Identities = 17/31 (54%), Positives = 25/31 (80%)
Frame = +2
Query: 638 KTQVTCEYVFAGGATVPQRVHTVVVSLQHSE 730
KTQVT +Y+ GA +P R+HT+V+S+QH+E
Sbjct: 181 KTQVTVQYMQDNGAVIPVRIHTIVISVQHNE 211
>AL359195-3|CAI13696.1| 145|Homo sapiens methionine
adenosyltransferase I, alpha protein.
Length = 145
Score = 142 bits (344), Expect = 1e-33
Identities = 64/96 (66%), Positives = 82/96 (85%), Gaps = 3/96 (3%)
Frame = +3
Query: 363 HIGYDDSSK---GFDYKTCSVMLALDQQSPNIAAGVHENRNDEEVGAGDQGLMFGYATDE 533
H+ D ++K GFD+KTC+V++AL+QQSP+IA VH +RN+E+VGAGDQGLMFGYATDE
Sbjct: 23 HLKQDPNAKVACGFDFKTCNVLVALEQQSPDIAQCVHLDRNEEDVGAGDQGLMFGYATDE 82
Query: 534 TEECMPLTVVLAHKLNQKIAELRRNGEFWWARPDSK 641
TEECMPLT++LAHKLN ++A+LRR+G W RPDSK
Sbjct: 83 TEECMPLTIILAHKLNARMADLRRSGLLPWLRPDSK 118
Score = 75.8 bits (178), Expect = 2e-13
Identities = 42/81 (51%), Positives = 49/81 (60%)
Frame = +3
Query: 165 ESVGEGHPDKMCDQISDAILDAHLNQDPDAKVACETITKTGMVLLCGEITSKANVDYQKV 344
ESVGEGHPDK+CDQISDA+LDAHL QDP+AKVAC KT VL+ E S +
Sbjct: 1 ESVGEGHPDKICDQISDAVLDAHLKQDPNAKVACGFDFKTCNVLVALEQQSPDIAQCVHL 60
Query: 345 VRETVKHIGYDDSSKGFDYKT 407
R + +G D F Y T
Sbjct: 61 DRNE-EDVGAGDQGLMFGYAT 80
Score = 39.1 bits (87), Expect = 0.016
Identities = 15/28 (53%), Positives = 22/28 (78%)
Frame = +2
Query: 638 KTQVTCEYVFAGGATVPQRVHTVVVSLQ 721
KTQVT +Y+ GA +P R+HT+V+S+Q
Sbjct: 118 KTQVTVQYMQDNGAVIPVRIHTIVISVQ 145
>AL445209-2|CAI15183.1| 726|Homo sapiens chromosome 13 open reading
frame 7 protein.
Length = 726
Score = 33.1 bits (72), Expect = 1.1
Identities = 23/53 (43%), Positives = 29/53 (54%), Gaps = 3/53 (5%)
Frame = -1
Query: 688 WDCCTTSKYIFASNLCFES--GLAHQNSPFRLSSAIF*LS-LCASTTVNGMHS 539
WDCC+TS +A NL FES G NS +SS + S LC S +N + S
Sbjct: 467 WDCCSTS---YAQNLDFESSEGNTIANSVGEISSKLSEKSGLCLSKRLNSIRS 516
>AL139319-1|CAH70397.1| 726|Homo sapiens chromosome 13 open reading
frame 7 protein.
Length = 726
Score = 33.1 bits (72), Expect = 1.1
Identities = 23/53 (43%), Positives = 29/53 (54%), Gaps = 3/53 (5%)
Frame = -1
Query: 688 WDCCTTSKYIFASNLCFES--GLAHQNSPFRLSSAIF*LS-LCASTTVNGMHS 539
WDCC+TS +A NL FES G NS +SS + S LC S +N + S
Sbjct: 467 WDCCSTS---YAQNLDFESSEGNTIANSVGEISSKLSEKSGLCLSKRLNSIRS 516
>AK023511-1|BAB14594.1| 460|Homo sapiens protein ( Homo sapiens
cDNA FLJ13449 fis, clone PLACE1003025. ).
Length = 460
Score = 33.1 bits (72), Expect = 1.1
Identities = 23/53 (43%), Positives = 29/53 (54%), Gaps = 3/53 (5%)
Frame = -1
Query: 688 WDCCTTSKYIFASNLCFES--GLAHQNSPFRLSSAIF*LS-LCASTTVNGMHS 539
WDCC+TS +A NL FES G NS +SS + S LC S +N + S
Sbjct: 201 WDCCSTS---YAQNLDFESSEGNTIANSVGEISSKLSEKSGLCLSKRLNSIRS 250
>BC028352-1|AAH28352.1| 691|Homo sapiens TBC1 domain family, member
15 protein.
Length = 691
Score = 30.3 bits (65), Expect = 7.4
Identities = 20/66 (30%), Positives = 31/66 (46%)
Frame = +3
Query: 54 WANSKFRMPETSKMNGYAKTNGHSYDMEDGSVFLFTSESVGEGHPDKMCDQISDAILDAH 233
W K + P T+ M G++K + +D GS S + P +M D +SDAI
Sbjct: 235 WKKIK-KDPYTATMIGFSKVTNYIFDSLRGS-----DPSTHQRPPSEMADFLSDAIPGLK 288
Query: 234 LNQDPD 251
+NQ +
Sbjct: 289 INQQEE 294
>AK022147-1|BAB13971.1| 674|Homo sapiens protein ( Homo sapiens
cDNA FLJ12085 fis, clone HEMBB1002510, weakly similar to
GYP7 PROTEIN. ).
Length = 674
Score = 29.9 bits (64), Expect = 9.8
Identities = 18/58 (31%), Positives = 28/58 (48%)
Frame = +3
Query: 78 PETSKMNGYAKTNGHSYDMEDGSVFLFTSESVGEGHPDKMCDQISDAILDAHLNQDPD 251
P T+ M G++K + +D GS S + P +M D +SDAI +NQ +
Sbjct: 225 PYTATMIGFSKVTNYIFDSLRGS-----DPSTHQRPPSEMADFLSDAIPGLKINQQEE 277
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 118,140,193
Number of Sequences: 237096
Number of extensions: 2719470
Number of successful extensions: 9587
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 9351
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9587
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8679165170
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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