Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc12p07
(733 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41009-4|AAA82280.1| 404|Caenorhabditis elegans Hypothetical pr... 283 9e-77
U41009-2|AAA82279.1| 404|Caenorhabditis elegans Hypothetical pr... 283 9e-77
U56963-9|AAB38126.2| 404|Caenorhabditis elegans Temporarily ass... 280 8e-76
Z81485-1|CAB03975.1| 403|Caenorhabditis elegans Hypothetical pr... 272 1e-73
U41009-3|AAO44916.1| 353|Caenorhabditis elegans Hypothetical pr... 194 7e-50
U56963-10|AAM97949.1| 353|Caenorhabditis elegans Temporarily as... 190 7e-49
U41009-5|AAO44915.1| 173|Caenorhabditis elegans Hypothetical pr... 149 3e-36
AL110479-10|CAD56249.1| 345|Caenorhabditis elegans Hypothetical... 146 2e-35
AL110479-11|CAB54357.1| 363|Caenorhabditis elegans Hypothetical... 142 2e-34
U41009-7|AAN84884.1| 51|Caenorhabditis elegans Hypothetical pr... 80 2e-15
U41009-6|AAK68167.2| 84|Caenorhabditis elegans Hypothetical pr... 44 8e-05
Z67884-5|CAA91810.1| 1787|Caenorhabditis elegans Hypothetical pr... 32 0.36
Z67881-4|CAA91798.1| 1787|Caenorhabditis elegans Hypothetical pr... 32 0.36
AF308444-1|AAG29837.1| 1787|Caenorhabditis elegans CHD-3 protein. 32 0.36
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 29 2.6
U61946-2|AAC24387.1| 341|Caenorhabditis elegans Serpentine rece... 29 4.5
U49956-1|AAO38615.1| 669|Caenorhabditis elegans Hypothetical pr... 28 5.9
AL132898-18|CAC14411.2| 417|Caenorhabditis elegans Hypothetical... 28 5.9
U28991-14|AAA68388.1| 352|Caenorhabditis elegans Hypothetical p... 28 7.8
U28991-13|AAA68387.1| 281|Caenorhabditis elegans Hypothetical p... 28 7.8
AL032631-1|CAB63336.1| 453|Caenorhabditis elegans Hypothetical ... 28 7.8
>U41009-4|AAA82280.1| 404|Caenorhabditis elegans Hypothetical
protein C06E7.1a protein.
Length = 404
Score = 283 bits (694), Expect = 9e-77
Identities = 126/164 (76%), Positives = 148/164 (90%)
Frame = +3
Query: 150 FLFTSESVGEGHPDKMCDQISDAILDAHLNQDPDAKVACETITKTGMVLLCGEITSKANV 329
FLFTSESV EGHPDKMCDQISDA+LDAHL QDP AKVACET+TKTGM++LCGEITSKA V
Sbjct: 6 FLFTSESVSEGHPDKMCDQISDAVLDAHLAQDPHAKVACETVTKTGMIMLCGEITSKAVV 65
Query: 330 DYQKVVRETVKHIGYDDSSKGFDYKTCSVMLALDQQSPNIAAGVHENRNDEEVGAGDQGL 509
DYQ +VR +K IGYDDSSKGFDYKTC+V++AL+QQSP IAAGVH +++ ++VGAGDQG+
Sbjct: 66 DYQVLVRNVIKKIGYDDSSKGFDYKTCNVLVALEQQSPEIAAGVHVDKDSDDVGAGDQGI 125
Query: 510 MFGYATDETEECMPLTVVLAHKLNQKIAELRRNGEFWWARPDSK 641
MFGYATDETEE MPLT++L+HKLN+K+ ELRR+GE W RPDSK
Sbjct: 126 MFGYATDETEEAMPLTLLLSHKLNRKLHELRRSGELEWVRPDSK 169
Score = 48.0 bits (109), Expect = 7e-06
Identities = 22/30 (73%), Positives = 23/30 (76%)
Frame = +2
Query: 638 KTQVTCEYVFAGGATVPQRVHTVVVSLQHS 727
KTQVT EY GGA VP RVHTVV+S QHS
Sbjct: 169 KTQVTIEYASEGGACVPLRVHTVVISTQHS 198
>U41009-2|AAA82279.1| 404|Caenorhabditis elegans Hypothetical
protein C06E7.3a protein.
Length = 404
Score = 283 bits (694), Expect = 9e-77
Identities = 126/164 (76%), Positives = 148/164 (90%)
Frame = +3
Query: 150 FLFTSESVGEGHPDKMCDQISDAILDAHLNQDPDAKVACETITKTGMVLLCGEITSKANV 329
FLFTSESV EGHPDKMCDQISDA+LDAHL QDP AKVACET+TKTGM++LCGEITSKA V
Sbjct: 6 FLFTSESVSEGHPDKMCDQISDAVLDAHLAQDPHAKVACETVTKTGMIMLCGEITSKAVV 65
Query: 330 DYQKVVRETVKHIGYDDSSKGFDYKTCSVMLALDQQSPNIAAGVHENRNDEEVGAGDQGL 509
DYQ +VR +K IGYDDSSKGFDYKTC+V++AL+QQSP IAAGVH +++ ++VGAGDQG+
Sbjct: 66 DYQVLVRNVIKKIGYDDSSKGFDYKTCNVLVALEQQSPEIAAGVHVDKDSDDVGAGDQGI 125
Query: 510 MFGYATDETEECMPLTVVLAHKLNQKIAELRRNGEFWWARPDSK 641
MFGYATDETEE MPLT++L+HKLN+K+ ELRR+GE W RPDSK
Sbjct: 126 MFGYATDETEEAMPLTLLLSHKLNRKLHELRRSGELEWVRPDSK 169
Score = 48.0 bits (109), Expect = 7e-06
Identities = 22/30 (73%), Positives = 23/30 (76%)
Frame = +2
Query: 638 KTQVTCEYVFAGGATVPQRVHTVVVSLQHS 727
KTQVT EY GGA VP RVHTVV+S QHS
Sbjct: 169 KTQVTIEYASEGGACVPLRVHTVVISTQHS 198
>U56963-9|AAB38126.2| 404|Caenorhabditis elegans Temporarily
assigned gene nameprotein 32, isoform a protein.
Length = 404
Score = 280 bits (686), Expect = 8e-76
Identities = 126/164 (76%), Positives = 146/164 (89%)
Frame = +3
Query: 150 FLFTSESVGEGHPDKMCDQISDAILDAHLNQDPDAKVACETITKTGMVLLCGEITSKANV 329
FLFTSESV EGHPDKMCDQISDA+LDAHL QDP AKVACET+TKTGM++LCGEITSKA V
Sbjct: 6 FLFTSESVSEGHPDKMCDQISDAVLDAHLAQDPHAKVACETVTKTGMIMLCGEITSKAVV 65
Query: 330 DYQKVVRETVKHIGYDDSSKGFDYKTCSVMLALDQQSPNIAAGVHENRNDEEVGAGDQGL 509
DYQ +VR +K IGYDDSSKGFDYKTC+V++AL+QQSP IAAGVH +++ +VGAGDQG+
Sbjct: 66 DYQVLVRNVIKKIGYDDSSKGFDYKTCNVLVALEQQSPEIAAGVHVDKDIADVGAGDQGI 125
Query: 510 MFGYATDETEECMPLTVVLAHKLNQKIAELRRNGEFWWARPDSK 641
MFGYATDETEE MPLT++L+HKLN K+ ELRR+GE W RPDSK
Sbjct: 126 MFGYATDETEEAMPLTLLLSHKLNYKLHELRRSGELEWVRPDSK 169
Score = 47.2 bits (107), Expect = 1e-05
Identities = 22/30 (73%), Positives = 23/30 (76%)
Frame = +2
Query: 638 KTQVTCEYVFAGGATVPQRVHTVVVSLQHS 727
KTQVT EY GGA VP RVHTVV+S QHS
Sbjct: 169 KTQVTIEYSSEGGACVPLRVHTVVISTQHS 198
>Z81485-1|CAB03975.1| 403|Caenorhabditis elegans Hypothetical
protein C49F5.1 protein.
Length = 403
Score = 272 bits (668), Expect = 1e-73
Identities = 122/169 (72%), Positives = 148/169 (87%)
Frame = +3
Query: 144 SVFLFTSESVGEGHPDKMCDQISDAILDAHLNQDPDAKVACETITKTGMVLLCGEITSKA 323
S FLFTSESV EGHPDKMCDQISDA+LDAHL QDP+AKVACET+TKTGMV+LCGEITSKA
Sbjct: 3 SKFLFTSESVSEGHPDKMCDQISDAVLDAHLKQDPNAKVACETVTKTGMVMLCGEITSKA 62
Query: 324 NVDYQKVVRETVKHIGYDDSSKGFDYKTCSVMLALDQQSPNIAAGVHENRNDEEVGAGDQ 503
VDYQ +VR ++ IG+ DSS GFD+KTC+V++AL+QQSP IAAGVH N++ E+VGAGDQ
Sbjct: 63 VVDYQVLVRRVIEKIGFTDSSIGFDHKTCNVLVALEQQSPEIAAGVHVNKDGEDVGAGDQ 122
Query: 504 GLMFGYATDETEECMPLTVVLAHKLNQKIAELRRNGEFWWARPDSKHRL 650
G+MFGYATDETEE MPLT++L+HK+N ++ +LRRNG W RPDSK ++
Sbjct: 123 GIMFGYATDETEETMPLTLILSHKINAELHKLRRNGTLPWVRPDSKSQV 171
Score = 44.8 bits (101), Expect = 6e-05
Identities = 21/30 (70%), Positives = 23/30 (76%)
Frame = +2
Query: 638 KTQVTCEYVFAGGATVPQRVHTVVVSLQHS 727
K+QVT EY GAT+P RVHTVVVS QHS
Sbjct: 168 KSQVTIEYESRHGATIPLRVHTVVVSTQHS 197
>U41009-3|AAO44916.1| 353|Caenorhabditis elegans Hypothetical
protein C06E7.3b protein.
Length = 353
Score = 194 bits (472), Expect = 7e-50
Identities = 85/118 (72%), Positives = 105/118 (88%)
Frame = +3
Query: 288 MVLLCGEITSKANVDYQKVVRETVKHIGYDDSSKGFDYKTCSVMLALDQQSPNIAAGVHE 467
M++LCGEITSKA VDYQ +VR +K IGYDDSSKGFDYKTC+V++AL+QQSP IAAGVH
Sbjct: 1 MIMLCGEITSKAVVDYQVLVRNVIKKIGYDDSSKGFDYKTCNVLVALEQQSPEIAAGVHV 60
Query: 468 NRNDEEVGAGDQGLMFGYATDETEECMPLTVVLAHKLNQKIAELRRNGEFWWARPDSK 641
+++ ++VGAGDQG+MFGYATDETEE MPLT++L+HKLN+K+ ELRR+GE W RPDSK
Sbjct: 61 DKDSDDVGAGDQGIMFGYATDETEEAMPLTLLLSHKLNRKLHELRRSGELEWVRPDSK 118
Score = 48.0 bits (109), Expect = 7e-06
Identities = 22/30 (73%), Positives = 23/30 (76%)
Frame = +2
Query: 638 KTQVTCEYVFAGGATVPQRVHTVVVSLQHS 727
KTQVT EY GGA VP RVHTVV+S QHS
Sbjct: 118 KTQVTIEYASEGGACVPLRVHTVVISTQHS 147
>U56963-10|AAM97949.1| 353|Caenorhabditis elegans Temporarily
assigned gene nameprotein 32, isoform b protein.
Length = 353
Score = 190 bits (464), Expect = 7e-49
Identities = 85/118 (72%), Positives = 103/118 (87%)
Frame = +3
Query: 288 MVLLCGEITSKANVDYQKVVRETVKHIGYDDSSKGFDYKTCSVMLALDQQSPNIAAGVHE 467
M++LCGEITSKA VDYQ +VR +K IGYDDSSKGFDYKTC+V++AL+QQSP IAAGVH
Sbjct: 1 MIMLCGEITSKAVVDYQVLVRNVIKKIGYDDSSKGFDYKTCNVLVALEQQSPEIAAGVHV 60
Query: 468 NRNDEEVGAGDQGLMFGYATDETEECMPLTVVLAHKLNQKIAELRRNGEFWWARPDSK 641
+++ +VGAGDQG+MFGYATDETEE MPLT++L+HKLN K+ ELRR+GE W RPDSK
Sbjct: 61 DKDIADVGAGDQGIMFGYATDETEEAMPLTLLLSHKLNYKLHELRRSGELEWVRPDSK 118
Score = 47.2 bits (107), Expect = 1e-05
Identities = 22/30 (73%), Positives = 23/30 (76%)
Frame = +2
Query: 638 KTQVTCEYVFAGGATVPQRVHTVVVSLQHS 727
KTQVT EY GGA VP RVHTVV+S QHS
Sbjct: 118 KTQVTIEYSSEGGACVPLRVHTVVISTQHS 147
>U41009-5|AAO44915.1| 173|Caenorhabditis elegans Hypothetical
protein C06E7.1d protein.
Length = 173
Score = 149 bits (360), Expect = 3e-36
Identities = 67/81 (82%), Positives = 73/81 (90%)
Frame = +3
Query: 150 FLFTSESVGEGHPDKMCDQISDAILDAHLNQDPDAKVACETITKTGMVLLCGEITSKANV 329
FLFTSESV EGHPDKMCDQISDA+LDAHL QDP AKVACET+TKTGM++LCGEITSKA V
Sbjct: 6 FLFTSESVSEGHPDKMCDQISDAVLDAHLAQDPHAKVACETVTKTGMIMLCGEITSKAVV 65
Query: 330 DYQKVVRETVKHIGYDDSSKG 392
DYQ +VR +K IGYDDSSKG
Sbjct: 66 DYQVLVRNVIKKIGYDDSSKG 86
Score = 30.3 bits (65), Expect = 1.5
Identities = 25/78 (32%), Positives = 35/78 (44%), Gaps = 4/78 (5%)
Frame = +1
Query: 328 WIIKKLCAKRSNILVMMIRPKAL----ITRHAV*CSH*TNNHQTLLLGCMRTEMTRKLGQ 495
W+I LC + S+ L ++I+ ITRHA+ H NNH LL T +
Sbjct: 97 WLIT-LC-QESHFLGLLIKYSIQFQDSITRHAMFLLHSNNNHLKSLLESTWTRIVTMSEP 154
Query: 496 ETRA*CSVMQQMRQKNAC 549
E + C M M+ K C
Sbjct: 155 EIKELCLDMLLMKPKKRC 172
>AL110479-10|CAD56249.1| 345|Caenorhabditis elegans Hypothetical
protein Y105C5B.12a protein.
Length = 345
Score = 146 bits (353), Expect = 2e-35
Identities = 63/91 (69%), Positives = 79/91 (86%)
Frame = +3
Query: 369 GYDDSSKGFDYKTCSVMLALDQQSPNIAAGVHENRNDEEVGAGDQGLMFGYATDETEECM 548
GY D GFDYKTC+V++AL+QQSP IAAGVH +++ ++VGAGDQG+MFGYATDETEE M
Sbjct: 20 GYFDYRNGFDYKTCNVLVALEQQSPEIAAGVHVDKDSDDVGAGDQGIMFGYATDETEEAM 79
Query: 549 PLTVVLAHKLNQKIAELRRNGEFWWARPDSK 641
PLT++L+HKLN+K+ ELRR+GE W RPDSK
Sbjct: 80 PLTLLLSHKLNRKLHELRRSGELEWVRPDSK 110
Score = 47.6 bits (108), Expect = 9e-06
Identities = 21/30 (70%), Positives = 23/30 (76%)
Frame = +2
Query: 638 KTQVTCEYVFAGGATVPQRVHTVVVSLQHS 727
KTQVT EY GGA +P RVHTVV+S QHS
Sbjct: 110 KTQVTIEYASEGGACIPLRVHTVVISTQHS 139
>AL110479-11|CAB54357.1| 363|Caenorhabditis elegans Hypothetical
protein Y105C5B.12b protein.
Length = 363
Score = 142 bits (344), Expect = 2e-34
Identities = 63/96 (65%), Positives = 81/96 (84%), Gaps = 3/96 (3%)
Frame = +3
Query: 363 HIGYDDSSK---GFDYKTCSVMLALDQQSPNIAAGVHENRNDEEVGAGDQGLMFGYATDE 533
H+ D +K GFDYKTC+V++AL+QQSP IAAGVH +++ ++VGAGDQG+MFGYATDE
Sbjct: 33 HLAQDPHAKVACGFDYKTCNVLVALEQQSPEIAAGVHVDKDSDDVGAGDQGIMFGYATDE 92
Query: 534 TEECMPLTVVLAHKLNQKIAELRRNGEFWWARPDSK 641
TEE MPLT++L+HKLN+K+ ELRR+GE W RPDSK
Sbjct: 93 TEEAMPLTLLLSHKLNRKLHELRRSGELEWVRPDSK 128
Score = 83.0 bits (196), Expect = 2e-16
Identities = 47/86 (54%), Positives = 53/86 (61%)
Frame = +3
Query: 150 FLFTSESVGEGHPDKMCDQISDAILDAHLNQDPDAKVACETITKTGMVLLCGEITSKANV 329
FLFTSESV EGHPDKMCDQISDA+LDAHL QDP AKVAC KT VL+ E S
Sbjct: 6 FLFTSESVSEGHPDKMCDQISDAVLDAHLAQDPHAKVACGFDYKTCNVLVALEQQSPEIA 65
Query: 330 DYQKVVRETVKHIGYDDSSKGFDYKT 407
V +++ +G D F Y T
Sbjct: 66 AGVHVDKDS-DDVGAGDQGIMFGYAT 90
Score = 47.6 bits (108), Expect = 9e-06
Identities = 21/30 (70%), Positives = 23/30 (76%)
Frame = +2
Query: 638 KTQVTCEYVFAGGATVPQRVHTVVVSLQHS 727
KTQVT EY GGA +P RVHTVV+S QHS
Sbjct: 128 KTQVTIEYASEGGACIPLRVHTVVISTQHS 157
>U41009-7|AAN84884.1| 51|Caenorhabditis elegans Hypothetical
protein C06E7.1c protein.
Length = 51
Score = 79.8 bits (188), Expect = 2e-15
Identities = 35/39 (89%), Positives = 36/39 (92%)
Frame = +3
Query: 150 FLFTSESVGEGHPDKMCDQISDAILDAHLNQDPDAKVAC 266
FLFTSESV EGHPDKMCDQISDA+LDAHL QDP AKVAC
Sbjct: 6 FLFTSESVSEGHPDKMCDQISDAVLDAHLAQDPHAKVAC 44
>U41009-6|AAK68167.2| 84|Caenorhabditis elegans Hypothetical
protein C06E7.1b protein.
Length = 84
Score = 44.4 bits (100), Expect = 8e-05
Identities = 18/19 (94%), Positives = 18/19 (94%)
Frame = +3
Query: 150 FLFTSESVGEGHPDKMCDQ 206
FLFTSESV EGHPDKMCDQ
Sbjct: 6 FLFTSESVSEGHPDKMCDQ 24
>Z67884-5|CAA91810.1| 1787|Caenorhabditis elegans Hypothetical
protein T14G8.1 protein.
Length = 1787
Score = 32.3 bits (70), Expect = 0.36
Identities = 16/48 (33%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Frame = +3
Query: 216 AILDAHLNQDPDAKVACETITKTGM-VLLCGEITSKANVDYQKVVRET 356
A +D ++ Q P+ +C + G VL+ E +KAN+DY ++ +ET
Sbjct: 290 ACIDENMEQPPEGDWSCPHCEEHGPDVLIVEEEPAKANMDYCRICKET 337
>Z67881-4|CAA91798.1| 1787|Caenorhabditis elegans Hypothetical
protein T14G8.1 protein.
Length = 1787
Score = 32.3 bits (70), Expect = 0.36
Identities = 16/48 (33%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Frame = +3
Query: 216 AILDAHLNQDPDAKVACETITKTGM-VLLCGEITSKANVDYQKVVRET 356
A +D ++ Q P+ +C + G VL+ E +KAN+DY ++ +ET
Sbjct: 290 ACIDENMEQPPEGDWSCPHCEEHGPDVLIVEEEPAKANMDYCRICKET 337
>AF308444-1|AAG29837.1| 1787|Caenorhabditis elegans CHD-3 protein.
Length = 1787
Score = 32.3 bits (70), Expect = 0.36
Identities = 16/48 (33%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Frame = +3
Query: 216 AILDAHLNQDPDAKVACETITKTGM-VLLCGEITSKANVDYQKVVRET 356
A +D ++ Q P+ +C + G VL+ E +KAN+DY ++ +ET
Sbjct: 290 ACIDENMEQPPEGDWSCPHCEEHGPDVLIVEEEPAKANMDYCRICKET 337
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
protein F15B9.4 protein.
Length = 1140
Score = 29.5 bits (63), Expect = 2.6
Identities = 21/80 (26%), Positives = 37/80 (46%), Gaps = 1/80 (1%)
Frame = +3
Query: 372 YDDSSKGFDYKTCSVMLALDQQSPNIAAGVHENRNDEEVGAGDQGLMFGYATDE-TEECM 548
+DD+S+ + T + DQQ N + ++GA GL +++ T++
Sbjct: 225 HDDNSQPIEILTRILSKTSDQQWENFIGLLETIEKSTDIGASISGLRVSCSSNVLTKDSE 284
Query: 549 PLTVVLAHKLNQKIAELRRN 608
T V+ KLN++ E RN
Sbjct: 285 TQTDVVQRKLNKERREPSRN 304
>U61946-2|AAC24387.1| 341|Caenorhabditis elegans Serpentine
receptor, class h protein220 protein.
Length = 341
Score = 28.7 bits (61), Expect = 4.5
Identities = 12/24 (50%), Positives = 18/24 (75%)
Frame = +3
Query: 642 HRLLANMYLLVVQQSHREFIL*SC 713
H L++ + +LVVQ+ +REFI SC
Sbjct: 287 HGLVSTLVMLVVQKPYREFISKSC 310
>U49956-1|AAO38615.1| 669|Caenorhabditis elegans Hypothetical
protein M03A1.3 protein.
Length = 669
Score = 28.3 bits (60), Expect = 5.9
Identities = 16/64 (25%), Positives = 30/64 (46%)
Frame = +3
Query: 270 TITKTGMVLLCGEITSKANVDYQKVVRETVKHIGYDDSSKGFDYKTCSVMLALDQQSPNI 449
T+T+TG L + + ++++ K + D ++K D KTC L +DQ N+
Sbjct: 37 TLTRTGDSLNLRIYDENSAIRKVHILQKEGKDVLVDCTNKKEDGKTCEAQLTVDQFEKNL 96
Query: 450 AAGV 461
+
Sbjct: 97 PISI 100
>AL132898-18|CAC14411.2| 417|Caenorhabditis elegans Hypothetical
protein Y59A8B.13 protein.
Length = 417
Score = 28.3 bits (60), Expect = 5.9
Identities = 12/34 (35%), Positives = 21/34 (61%), Gaps = 3/34 (8%)
Frame = +1
Query: 316 PKLTWIIKKLCAKRSNIL---VMMIRPKALITRH 408
PK+ W ++K+C K+ +I + I P+ L+T H
Sbjct: 253 PKIVWHLEKMCNKKEDISRGNPVSIPPQRLLTHH 286
>U28991-14|AAA68388.1| 352|Caenorhabditis elegans Hypothetical
protein F08F8.1 protein.
Length = 352
Score = 27.9 bits (59), Expect = 7.8
Identities = 15/41 (36%), Positives = 16/41 (39%)
Frame = -3
Query: 389 FGRIIITNMFDRFAHNFLIIHVSFGCDFATQKHHTGFSYGF 267
FGR D NF H FG HH GF +GF
Sbjct: 149 FGRPFGRRGMDHHGFNFHRHHHPFGAFHGFGGHHHGFGHGF 189
>U28991-13|AAA68387.1| 281|Caenorhabditis elegans Hypothetical
protein F08F8.5 protein.
Length = 281
Score = 27.9 bits (59), Expect = 7.8
Identities = 15/41 (36%), Positives = 16/41 (39%)
Frame = -3
Query: 389 FGRIIITNMFDRFAHNFLIIHVSFGCDFATQKHHTGFSYGF 267
FGR D NF H FG HH GF +GF
Sbjct: 223 FGRPFGRRGMDHHGFNFHRHHHPFGAFHGFGGHHHGFGHGF 263
>AL032631-1|CAB63336.1| 453|Caenorhabditis elegans Hypothetical
protein Y106G6H.1 protein.
Length = 453
Score = 27.9 bits (59), Expect = 7.8
Identities = 16/46 (34%), Positives = 24/46 (52%)
Frame = +3
Query: 531 ETEECMPLTVVLAHKLNQKIAELRRNGEFWWARPDSKHRLLANMYL 668
E CM +T VL HK+ + A L + ++W R + H L A + L
Sbjct: 288 ECTACMSITNVLQHKIFLQPAMLDQT--YYWLRGNLFHNLCAELCL 331
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,824,084
Number of Sequences: 27780
Number of extensions: 436459
Number of successful extensions: 1258
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1190
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1258
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1714401074
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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