Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc12p05
         (468 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein p...    27   0.25 
AY334007-1|AAR01132.1|  202|Anopheles gambiae odorant receptor 1...    23   5.3  
AY334006-1|AAR01131.1|  202|Anopheles gambiae odorant receptor 1...    23   5.3  
AY334005-1|AAR01130.1|  202|Anopheles gambiae odorant receptor 1...    23   5.3  
AF364130-1|AAL35506.1|  417|Anopheles gambiae putative odorant r...    23   5.3  
AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.          23   7.0  

>AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein
           protein.
          Length = 1077

 Score = 27.5 bits (58), Expect = 0.25
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = +2

Query: 173 SIFKKNYNNVKVASYIEVPYTTNNADVEMTDTT 271
           S+  K+  NV + S+    YTT+N D   TD T
Sbjct: 391 SLTDKDAINVHIRSFFSELYTTDNTDNTQTDDT 423


>AY334007-1|AAR01132.1|  202|Anopheles gambiae odorant receptor 1
           protein.
          Length = 202

 Score = 23.0 bits (47), Expect = 5.3
 Identities = 11/31 (35%), Positives = 15/31 (48%)
 Frame = +1

Query: 376 TVIYLLNKFALK*VFLQIFVESINCILXKKK 468
           T+IY L KF      +Q  +  +NC L   K
Sbjct: 55  TLIYKLEKFNYNIARIQACLRKLNCTLYHPK 85


>AY334006-1|AAR01131.1|  202|Anopheles gambiae odorant receptor 1
           protein.
          Length = 202

 Score = 23.0 bits (47), Expect = 5.3
 Identities = 11/31 (35%), Positives = 15/31 (48%)
 Frame = +1

Query: 376 TVIYLLNKFALK*VFLQIFVESINCILXKKK 468
           T+IY L KF      +Q  +  +NC L   K
Sbjct: 55  TLIYKLEKFNYNIARIQACLRKLNCTLYHPK 85


>AY334005-1|AAR01130.1|  202|Anopheles gambiae odorant receptor 1
           protein.
          Length = 202

 Score = 23.0 bits (47), Expect = 5.3
 Identities = 11/31 (35%), Positives = 15/31 (48%)
 Frame = +1

Query: 376 TVIYLLNKFALK*VFLQIFVESINCILXKKK 468
           T+IY L KF      +Q  +  +NC L   K
Sbjct: 55  TLIYKLEKFNYNIARIQACLRKLNCTLYHPK 85


>AF364130-1|AAL35506.1|  417|Anopheles gambiae putative odorant
           receptor Or1 protein.
          Length = 417

 Score = 23.0 bits (47), Expect = 5.3
 Identities = 11/31 (35%), Positives = 15/31 (48%)
 Frame = +1

Query: 376 TVIYLLNKFALK*VFLQIFVESINCILXKKK 468
           T+IY L KF      +Q  +  +NC L   K
Sbjct: 89  TLIYKLEKFNYNIARIQACLRKLNCTLYHPK 119


>AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.
          Length = 1132

 Score = 22.6 bits (46), Expect = 7.0
 Identities = 13/51 (25%), Positives = 23/51 (45%)
 Frame = +2

Query: 200 VKVASYIEVPYTTNNADVEMTDTTNAPSRPKSKARRRLDFTNMAPQPCCID 352
           V V  +   P  T  + +  + ++ +PS P S A      +NM+P+    D
Sbjct: 48  VSVGEFTLGPGRTYASALSPSSSSASPSSPSSVASPNSRASNMSPESSASD 98


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 441,826
Number of Sequences: 2352
Number of extensions: 8114
Number of successful extensions: 12
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 40820256
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)