Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc12p05
         (468 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z77134-7|CAJ90503.1|  121|Caenorhabditis elegans Hypothetical pr...    27   6.7  
Z77134-6|CAB00872.2|  135|Caenorhabditis elegans Hypothetical pr...    27   6.7  
U00046-6|AAN65305.1|  422|Caenorhabditis elegans Mammalian zak k...    27   6.7  
U00046-5|AAC47047.4|  516|Caenorhabditis elegans Mammalian zak k...    27   6.7  

>Z77134-7|CAJ90503.1|  121|Caenorhabditis elegans Hypothetical
           protein R09H10.3b protein.
          Length = 121

 Score = 27.1 bits (57), Expect = 6.7
 Identities = 9/30 (30%), Positives = 16/30 (53%)
 Frame = +2

Query: 95  FIETVYNFSDHTMERYHPYQRAPWNASIFK 184
           ++E V+N  D T   + P   +PW  S ++
Sbjct: 90  YVEVVFNIRDATQHYHVPLTLSPWGYSTYR 119


>Z77134-6|CAB00872.2|  135|Caenorhabditis elegans Hypothetical
           protein R09H10.3a protein.
          Length = 135

 Score = 27.1 bits (57), Expect = 6.7
 Identities = 9/30 (30%), Positives = 16/30 (53%)
 Frame = +2

Query: 95  FIETVYNFSDHTMERYHPYQRAPWNASIFK 184
           ++E V+N  D T   + P   +PW  S ++
Sbjct: 104 YVEVVFNIRDATQHYHVPLTLSPWGYSTYR 133


>U00046-6|AAN65305.1|  422|Caenorhabditis elegans Mammalian zak
           kinase homolog protein1, isoform b protein.
          Length = 422

 Score = 27.1 bits (57), Expect = 6.7
 Identities = 13/25 (52%), Positives = 17/25 (68%)
 Frame = +2

Query: 233 TTNNADVEMTDTTNAPSRPKSKARR 307
           TTN+ D E +DT N    P+S+ARR
Sbjct: 378 TTNSEDTEKSDTNN--KTPESQARR 400


>U00046-5|AAC47047.4|  516|Caenorhabditis elegans Mammalian zak
           kinase homolog protein1, isoform a protein.
          Length = 516

 Score = 27.1 bits (57), Expect = 6.7
 Identities = 13/25 (52%), Positives = 17/25 (68%)
 Frame = +2

Query: 233 TTNNADVEMTDTTNAPSRPKSKARR 307
           TTN+ D E +DT N    P+S+ARR
Sbjct: 472 TTNSEDTEKSDTNN--KTPESQARR 494


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,509,443
Number of Sequences: 27780
Number of extensions: 187135
Number of successful extensions: 416
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 414
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 416
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 839684522
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)