Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc12o19
(700 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT023752-1|AAZ41760.1| 160|Drosophila melanogaster RH66170p pro... 121 1e-27
AF217228-1|AAF27630.1| 160|Drosophila melanogaster nucleolar pr... 121 1e-27
AE014296-2434|AAF49701.1| 160|Drosophila melanogaster CG5258-PA... 121 1e-27
AF208396-1|AAF20209.1| 127|Drosophila melanogaster Hoi-polloi p... 57 3e-08
AE014134-1677|AAF52798.2| 127|Drosophila melanogaster CG3949-PA... 57 3e-08
X82782-1|CAA58023.1| 271|Drosophila melanogaster ribosomal prot... 36 0.053
AY089570-1|AAL90308.1| 271|Drosophila melanogaster RE05022p pro... 36 0.053
AE014298-903|AAF46169.1| 271|Drosophila melanogaster CG3314-PD,... 36 0.053
AE014298-902|AAN09172.1| 271|Drosophila melanogaster CG3314-PC,... 36 0.053
AE014298-901|AAN09170.1| 271|Drosophila melanogaster CG3314-PA,... 36 0.053
BT024453-1|ABC86515.1| 774|Drosophila melanogaster GH09076p pro... 29 4.6
BT023142-1|AAY55558.1| 704|Drosophila melanogaster IP08936p pro... 29 4.6
BT022131-1|AAY51526.1| 704|Drosophila melanogaster IP08836p pro... 29 4.6
AJ000261-1|CAA03977.1| 774|Drosophila melanogaster D19B protein. 29 4.6
AF417921-1|AAL16644.1| 2669|Drosophila melanogaster nucleosome r... 29 4.6
AE014296-1093|AAF50678.1| 774|Drosophila melanogaster CG10270-P... 29 4.6
AE014296-62|AAS64922.1| 2159|Drosophila melanogaster CG32346-PC,... 29 4.6
AE014296-61|AAN11431.1| 2669|Drosophila melanogaster CG32346-PA,... 29 4.6
AE014296-60|AAF47361.2| 2649|Drosophila melanogaster CG32346-PB,... 29 4.6
AY058275-1|AAL13504.1| 630|Drosophila melanogaster GH02822p pro... 29 8.0
AE014134-2387|AAF53324.1| 630|Drosophila melanogaster CG7364-PA... 29 8.0
>BT023752-1|AAZ41760.1| 160|Drosophila melanogaster RH66170p
protein.
Length = 160
Score = 121 bits (291), Expect = 1e-27
Identities = 50/86 (58%), Positives = 68/86 (79%)
Frame = +1
Query: 1 EKQLRLGEKGMVFFAGDISPIEIMCHLPAVCEEKDVQYCYTPSRKDIGAAMGTMRGCIMV 180
+ +LR GE G+ FAGD++P++IMCHLPAVCEEK + Y YTPSR D+GAAMG RG + +
Sbjct: 75 QTRLRKGETGICIFAGDVTPVDIMCHLPAVCEEKGIPYTYTPSRADLGAAMGVKRGTVAL 134
Query: 181 LVKEHEDYKDLYEEVKSEIKLLGHPL 258
LV+++E+YKDLY+EVK E+ L P+
Sbjct: 135 LVRQNEEYKDLYDEVKEELSALNIPV 160
>AF217228-1|AAF27630.1| 160|Drosophila melanogaster nucleolar
protein NHP2 protein.
Length = 160
Score = 121 bits (291), Expect = 1e-27
Identities = 50/86 (58%), Positives = 68/86 (79%)
Frame = +1
Query: 1 EKQLRLGEKGMVFFAGDISPIEIMCHLPAVCEEKDVQYCYTPSRKDIGAAMGTMRGCIMV 180
+ +LR GE G+ FAGD++P++IMCHLPAVCEEK + Y YTPSR D+GAAMG RG + +
Sbjct: 75 QTRLRKGETGICIFAGDVTPVDIMCHLPAVCEEKGIPYTYTPSRADLGAAMGVKRGTVAL 134
Query: 181 LVKEHEDYKDLYEEVKSEIKLLGHPL 258
LV+++E+YKDLY+EVK E+ L P+
Sbjct: 135 LVRQNEEYKDLYDEVKEELSALNIPV 160
>AE014296-2434|AAF49701.1| 160|Drosophila melanogaster CG5258-PA
protein.
Length = 160
Score = 121 bits (291), Expect = 1e-27
Identities = 50/86 (58%), Positives = 68/86 (79%)
Frame = +1
Query: 1 EKQLRLGEKGMVFFAGDISPIEIMCHLPAVCEEKDVQYCYTPSRKDIGAAMGTMRGCIMV 180
+ +LR GE G+ FAGD++P++IMCHLPAVCEEK + Y YTPSR D+GAAMG RG + +
Sbjct: 75 QTRLRKGETGICIFAGDVTPVDIMCHLPAVCEEKGIPYTYTPSRADLGAAMGVKRGTVAL 134
Query: 181 LVKEHEDYKDLYEEVKSEIKLLGHPL 258
LV+++E+YKDLY+EVK E+ L P+
Sbjct: 135 LVRQNEEYKDLYDEVKEELSALNIPV 160
>AF208396-1|AAF20209.1| 127|Drosophila melanogaster Hoi-polloi
protein.
Length = 127
Score = 56.8 bits (131), Expect = 3e-08
Identities = 30/83 (36%), Positives = 43/83 (51%), Gaps = 2/83 (2%)
Frame = +1
Query: 4 KQLRLGEKGMVFFAGDISPIEIMCHLPAVCEEKDVQYCYTPSRKDIGAAMGTMRGCI--M 177
K L G +V AGD PIEI+ HLP +CE+K+V Y + S++ +G A G R +
Sbjct: 43 KTLNRGLADIVVLAGDAEPIEILLHLPLLCEDKNVPYVFVRSKQALGRACGVSRPIVACS 102
Query: 178 VLVKEHEDYKDLYEEVKSEIKLL 246
V E K ++ EI+ L
Sbjct: 103 VTTNEGSQLKSQITSIQQEIERL 125
>AE014134-1677|AAF52798.2| 127|Drosophila melanogaster CG3949-PA
protein.
Length = 127
Score = 56.8 bits (131), Expect = 3e-08
Identities = 30/83 (36%), Positives = 43/83 (51%), Gaps = 2/83 (2%)
Frame = +1
Query: 4 KQLRLGEKGMVFFAGDISPIEIMCHLPAVCEEKDVQYCYTPSRKDIGAAMGTMRGCI--M 177
K L G +V AGD PIEI+ HLP +CE+K+V Y + S++ +G A G R +
Sbjct: 43 KTLNRGLADIVVLAGDAEPIEILLHLPLLCEDKNVPYVFVRSKQALGRACGVSRPIVACS 102
Query: 178 VLVKEHEDYKDLYEEVKSEIKLL 246
V E K ++ EI+ L
Sbjct: 103 VTTNEGSQLKSQITSIQQEIERL 125
>X82782-1|CAA58023.1| 271|Drosophila melanogaster ribosomal protein
L7a protein.
Length = 271
Score = 35.9 bits (79), Expect = 0.053
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = +1
Query: 31 MVFFAGDISPIEIMCHLPAVCEEKDVQYCYTPSRKDIG 144
+V A D+ P+E++ LPA+C + V YC + +G
Sbjct: 159 LVVIAHDVDPLELVLFLPALCRKMGVPYCIVKGKARLG 196
>AY089570-1|AAL90308.1| 271|Drosophila melanogaster RE05022p
protein.
Length = 271
Score = 35.9 bits (79), Expect = 0.053
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = +1
Query: 31 MVFFAGDISPIEIMCHLPAVCEEKDVQYCYTPSRKDIG 144
+V A D+ P+E++ LPA+C + V YC + +G
Sbjct: 159 LVVIAHDVDPLELVLFLPALCRKMGVPYCIVKGKARLG 196
>AE014298-903|AAF46169.1| 271|Drosophila melanogaster CG3314-PD,
isoform D protein.
Length = 271
Score = 35.9 bits (79), Expect = 0.053
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = +1
Query: 31 MVFFAGDISPIEIMCHLPAVCEEKDVQYCYTPSRKDIG 144
+V A D+ P+E++ LPA+C + V YC + +G
Sbjct: 159 LVVIAHDVDPLELVLFLPALCRKMGVPYCIVKGKARLG 196
>AE014298-902|AAN09172.1| 271|Drosophila melanogaster CG3314-PC,
isoform C protein.
Length = 271
Score = 35.9 bits (79), Expect = 0.053
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = +1
Query: 31 MVFFAGDISPIEIMCHLPAVCEEKDVQYCYTPSRKDIG 144
+V A D+ P+E++ LPA+C + V YC + +G
Sbjct: 159 LVVIAHDVDPLELVLFLPALCRKMGVPYCIVKGKARLG 196
>AE014298-901|AAN09170.1| 271|Drosophila melanogaster CG3314-PA,
isoform A protein.
Length = 271
Score = 35.9 bits (79), Expect = 0.053
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = +1
Query: 31 MVFFAGDISPIEIMCHLPAVCEEKDVQYCYTPSRKDIG 144
+V A D+ P+E++ LPA+C + V YC + +G
Sbjct: 159 LVVIAHDVDPLELVLFLPALCRKMGVPYCIVKGKARLG 196
>BT024453-1|ABC86515.1| 774|Drosophila melanogaster GH09076p
protein.
Length = 774
Score = 29.5 bits (63), Expect = 4.6
Identities = 17/39 (43%), Positives = 22/39 (56%), Gaps = 5/39 (12%)
Frame = +3
Query: 48 RHFTHRNHVSPTCGL----RGE-GRPILLHSK*EGYRCR 149
RH +NHV P CG+ R E + IL H+K + Y CR
Sbjct: 397 RHAGIKNHVCPYCGVGKTTRQEWNKHILTHTKEKKYECR 435
>BT023142-1|AAY55558.1| 704|Drosophila melanogaster IP08936p
protein.
Length = 704
Score = 29.5 bits (63), Expect = 4.6
Identities = 13/44 (29%), Positives = 18/44 (40%)
Frame = +3
Query: 51 HFTHRNHVSPTCGLRGEGRPILLHSK*EGYRCRHGYNARMHHGT 182
H H N + RG GR + Y R GY + H+G+
Sbjct: 63 HNNHTNRSRGSAAKRGRGRKSAVQPNTSSYSGRKGYESEYHYGS 106
>BT022131-1|AAY51526.1| 704|Drosophila melanogaster IP08836p
protein.
Length = 704
Score = 29.5 bits (63), Expect = 4.6
Identities = 13/44 (29%), Positives = 18/44 (40%)
Frame = +3
Query: 51 HFTHRNHVSPTCGLRGEGRPILLHSK*EGYRCRHGYNARMHHGT 182
H H N + RG GR + Y R GY + H+G+
Sbjct: 63 HNNHTNRSRGSAAKRGRGRKSAVQPNTSSYSGRKGYESEYHYGS 106
>AJ000261-1|CAA03977.1| 774|Drosophila melanogaster D19B protein.
Length = 774
Score = 29.5 bits (63), Expect = 4.6
Identities = 17/39 (43%), Positives = 22/39 (56%), Gaps = 5/39 (12%)
Frame = +3
Query: 48 RHFTHRNHVSPTCGL----RGE-GRPILLHSK*EGYRCR 149
RH +NHV P CG+ R E + IL H+K + Y CR
Sbjct: 397 RHAGIKNHVCPYCGVGKTTRQEWNKHILTHTKEKKYECR 435
>AF417921-1|AAL16644.1| 2669|Drosophila melanogaster nucleosome
remodeling factor largesubunit NURF301 protein.
Length = 2669
Score = 29.5 bits (63), Expect = 4.6
Identities = 13/44 (29%), Positives = 18/44 (40%)
Frame = +3
Query: 51 HFTHRNHVSPTCGLRGEGRPILLHSK*EGYRCRHGYNARMHHGT 182
H H N + RG GR + Y R GY + H+G+
Sbjct: 63 HNNHTNRSRGSAAKRGRGRKSAVQPNTSSYSGRKGYESEYHYGS 106
>AE014296-1093|AAF50678.1| 774|Drosophila melanogaster CG10270-PA
protein.
Length = 774
Score = 29.5 bits (63), Expect = 4.6
Identities = 17/39 (43%), Positives = 22/39 (56%), Gaps = 5/39 (12%)
Frame = +3
Query: 48 RHFTHRNHVSPTCGL----RGE-GRPILLHSK*EGYRCR 149
RH +NHV P CG+ R E + IL H+K + Y CR
Sbjct: 397 RHAGIKNHVCPYCGVGKTTRQEWNKHILTHTKEKKYECR 435
>AE014296-62|AAS64922.1| 2159|Drosophila melanogaster CG32346-PC,
isoform C protein.
Length = 2159
Score = 29.5 bits (63), Expect = 4.6
Identities = 13/44 (29%), Positives = 18/44 (40%)
Frame = +3
Query: 51 HFTHRNHVSPTCGLRGEGRPILLHSK*EGYRCRHGYNARMHHGT 182
H H N + RG GR + Y R GY + H+G+
Sbjct: 63 HNNHTNRSRGSAAKRGRGRKSAVQPNTSSYSGRKGYESEYHYGS 106
>AE014296-61|AAN11431.1| 2669|Drosophila melanogaster CG32346-PA,
isoform A protein.
Length = 2669
Score = 29.5 bits (63), Expect = 4.6
Identities = 13/44 (29%), Positives = 18/44 (40%)
Frame = +3
Query: 51 HFTHRNHVSPTCGLRGEGRPILLHSK*EGYRCRHGYNARMHHGT 182
H H N + RG GR + Y R GY + H+G+
Sbjct: 63 HNNHTNRSRGSAAKRGRGRKSAVQPNTSSYSGRKGYESEYHYGS 106
>AE014296-60|AAF47361.2| 2649|Drosophila melanogaster CG32346-PB,
isoform B protein.
Length = 2649
Score = 29.5 bits (63), Expect = 4.6
Identities = 13/44 (29%), Positives = 18/44 (40%)
Frame = +3
Query: 51 HFTHRNHVSPTCGLRGEGRPILLHSK*EGYRCRHGYNARMHHGT 182
H H N + RG GR + Y R GY + H+G+
Sbjct: 63 HNNHTNRSRGSAAKRGRGRKSAVQPNTSSYSGRKGYESEYHYGS 106
>AY058275-1|AAL13504.1| 630|Drosophila melanogaster GH02822p
protein.
Length = 630
Score = 28.7 bits (61), Expect = 8.0
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = -2
Query: 282 IRILFIYLQWMTEQFYFTFNFLVQIFIILM 193
I + F++ QFY+ F FL +F IL+
Sbjct: 504 IELFFVFTAIWQNQFYYLFGFLFLVFCILV 533
>AE014134-2387|AAF53324.1| 630|Drosophila melanogaster CG7364-PA
protein.
Length = 630
Score = 28.7 bits (61), Expect = 8.0
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = -2
Query: 282 IRILFIYLQWMTEQFYFTFNFLVQIFIILM 193
I + F++ QFY+ F FL +F IL+
Sbjct: 504 IELFFVFTAIWQNQFYYLFGFLFLVFCILV 533
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,120,156
Number of Sequences: 53049
Number of extensions: 616375
Number of successful extensions: 1334
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1318
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1334
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3067209849
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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