Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc12o06
         (482 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X65923-1|CAA46716.1|  133|Homo sapiens fau protein.                    87   2e-17
X65921-1|CAA46714.1|  133|Homo sapiens fau 1 protein.                  87   2e-17
CR541974-1|CAG46772.1|  133|Homo sapiens FAU protein.                  87   2e-17
BC033877-1|AAH33877.1|  133|Homo sapiens Finkel-Biskis-Reilly mu...    87   2e-17
AY398663-1|AAQ87877.1|  133|Homo sapiens Finkel-Biskis-Reilly mu...    87   2e-17
AK026639-1|BAB15515.1|  133|Homo sapiens protein ( Homo sapiens ...    87   2e-17
X75315-1|CAA53064.1|  230|Homo sapiens SEB4B protein.                  41   0.003

>X65923-1|CAA46716.1|  133|Homo sapiens fau protein.
          Length = 133

 Score = 87.4 bits (207), Expect = 2e-17
 Identities = 44/102 (43%), Positives = 59/102 (57%), Gaps = 3/102 (2%)
 Frame = +1

Query: 40  MQLHIRGQSTHVLDVNGQESIGQIKERIRTLAAVGDEDLTLSLCGAPXXXXXXXXXXXXX 219
           MQL +R Q  H  +V GQE++ QIK  + +L  +  ED  + L GAP             
Sbjct: 1   MQLFVRAQELHTFEVTGQETVAQIKAHVASLEGIAPEDQVVLLAGAPLEDEATLGQCGVE 60

Query: 220 XXXXTVP---LLGGKVHGSLARAGKVKGQTPKVEKQQKRRRR 336
                     +LGGKVHGSLARAGKV+GQTPKV KQ+K++++
Sbjct: 61  ALTTLEVAGRMLGGKVHGSLARAGKVRGQTPKVAKQEKKKKK 102



 Score = 58.4 bits (135), Expect = 1e-08
 Identities = 24/30 (80%), Positives = 29/30 (96%)
 Frame = +3

Query: 339 GRAKRRIQYNRRFVNVVQTFGRRRGPNSNS 428
           GRAKRR+QYNRRFVNVV TFG+++GPN+NS
Sbjct: 104 GRAKRRMQYNRRFVNVVPTFGKKKGPNANS 133


>X65921-1|CAA46714.1|  133|Homo sapiens fau 1 protein.
          Length = 133

 Score = 87.4 bits (207), Expect = 2e-17
 Identities = 44/102 (43%), Positives = 59/102 (57%), Gaps = 3/102 (2%)
 Frame = +1

Query: 40  MQLHIRGQSTHVLDVNGQESIGQIKERIRTLAAVGDEDLTLSLCGAPXXXXXXXXXXXXX 219
           MQL +R Q  H  +V GQE++ QIK  + +L  +  ED  + L GAP             
Sbjct: 1   MQLFVRAQELHTFEVTGQETVAQIKAHVASLEGIAPEDQVVLLAGAPLEDEATLGQCGVE 60

Query: 220 XXXXTVP---LLGGKVHGSLARAGKVKGQTPKVEKQQKRRRR 336
                     +LGGKVHGSLARAGKV+GQTPKV KQ+K++++
Sbjct: 61  ALTTLEVAGRMLGGKVHGSLARAGKVRGQTPKVAKQEKKKKK 102



 Score = 58.4 bits (135), Expect = 1e-08
 Identities = 24/30 (80%), Positives = 29/30 (96%)
 Frame = +3

Query: 339 GRAKRRIQYNRRFVNVVQTFGRRRGPNSNS 428
           GRAKRR+QYNRRFVNVV TFG+++GPN+NS
Sbjct: 104 GRAKRRMQYNRRFVNVVPTFGKKKGPNANS 133


>CR541974-1|CAG46772.1|  133|Homo sapiens FAU protein.
          Length = 133

 Score = 87.4 bits (207), Expect = 2e-17
 Identities = 44/102 (43%), Positives = 59/102 (57%), Gaps = 3/102 (2%)
 Frame = +1

Query: 40  MQLHIRGQSTHVLDVNGQESIGQIKERIRTLAAVGDEDLTLSLCGAPXXXXXXXXXXXXX 219
           MQL +R Q  H  +V GQE++ QIK  + +L  +  ED  + L GAP             
Sbjct: 1   MQLFVRAQELHTFEVTGQETVAQIKAHVASLEGIAPEDQVVLLAGAPLEDEATLGQCGVE 60

Query: 220 XXXXTVP---LLGGKVHGSLARAGKVKGQTPKVEKQQKRRRR 336
                     +LGGKVHGSLARAGKV+GQTPKV KQ+K++++
Sbjct: 61  ALTTLEVAGRMLGGKVHGSLARAGKVRGQTPKVAKQEKKKKK 102



 Score = 58.4 bits (135), Expect = 1e-08
 Identities = 24/30 (80%), Positives = 29/30 (96%)
 Frame = +3

Query: 339 GRAKRRIQYNRRFVNVVQTFGRRRGPNSNS 428
           GRAKRR+QYNRRFVNVV TFG+++GPN+NS
Sbjct: 104 GRAKRRMQYNRRFVNVVPTFGKKKGPNANS 133


>BC033877-1|AAH33877.1|  133|Homo sapiens Finkel-Biskis-Reilly
           murine sarcoma virus (FBR-MuSV) ubiquitously expressed
           protein.
          Length = 133

 Score = 87.4 bits (207), Expect = 2e-17
 Identities = 44/102 (43%), Positives = 59/102 (57%), Gaps = 3/102 (2%)
 Frame = +1

Query: 40  MQLHIRGQSTHVLDVNGQESIGQIKERIRTLAAVGDEDLTLSLCGAPXXXXXXXXXXXXX 219
           MQL +R Q  H  +V GQE++ QIK  + +L  +  ED  + L GAP             
Sbjct: 1   MQLFVRAQELHTFEVTGQETVAQIKAHVASLEGIAPEDQVVLLAGAPLEDEATLGQCGVE 60

Query: 220 XXXXTVP---LLGGKVHGSLARAGKVKGQTPKVEKQQKRRRR 336
                     +LGGKVHGSLARAGKV+GQTPKV KQ+K++++
Sbjct: 61  ALTTLEVAGRMLGGKVHGSLARAGKVRGQTPKVAKQEKKKKK 102



 Score = 58.4 bits (135), Expect = 1e-08
 Identities = 24/30 (80%), Positives = 29/30 (96%)
 Frame = +3

Query: 339 GRAKRRIQYNRRFVNVVQTFGRRRGPNSNS 428
           GRAKRR+QYNRRFVNVV TFG+++GPN+NS
Sbjct: 104 GRAKRRMQYNRRFVNVVPTFGKKKGPNANS 133


>AY398663-1|AAQ87877.1|  133|Homo sapiens Finkel-Biskis-Reilly
           murine sarcoma virus (FBR-MuSV) ubiquitously expressed
           (fo protein.
          Length = 133

 Score = 87.4 bits (207), Expect = 2e-17
 Identities = 44/102 (43%), Positives = 59/102 (57%), Gaps = 3/102 (2%)
 Frame = +1

Query: 40  MQLHIRGQSTHVLDVNGQESIGQIKERIRTLAAVGDEDLTLSLCGAPXXXXXXXXXXXXX 219
           MQL +R Q  H  +V GQE++ QIK  + +L  +  ED  + L GAP             
Sbjct: 1   MQLFVRAQELHTFEVTGQETVAQIKAHVASLEGIAPEDQVVLLAGAPLEDEATLGQCGVE 60

Query: 220 XXXXTVP---LLGGKVHGSLARAGKVKGQTPKVEKQQKRRRR 336
                     +LGGKVHGSLARAGKV+GQTPKV KQ+K++++
Sbjct: 61  ALTTLEVAGRMLGGKVHGSLARAGKVRGQTPKVAKQEKKKKK 102



 Score = 58.4 bits (135), Expect = 1e-08
 Identities = 24/30 (80%), Positives = 29/30 (96%)
 Frame = +3

Query: 339 GRAKRRIQYNRRFVNVVQTFGRRRGPNSNS 428
           GRAKRR+QYNRRFVNVV TFG+++GPN+NS
Sbjct: 104 GRAKRRMQYNRRFVNVVPTFGKKKGPNANS 133


>AK026639-1|BAB15515.1|  133|Homo sapiens protein ( Homo sapiens
           cDNA: FLJ22986 fis, clone KAT11742. ).
          Length = 133

 Score = 87.4 bits (207), Expect = 2e-17
 Identities = 44/102 (43%), Positives = 59/102 (57%), Gaps = 3/102 (2%)
 Frame = +1

Query: 40  MQLHIRGQSTHVLDVNGQESIGQIKERIRTLAAVGDEDLTLSLCGAPXXXXXXXXXXXXX 219
           MQL +R Q  H  +V GQE++ QIK  + +L  +  ED  + L GAP             
Sbjct: 1   MQLFVRAQELHTFEVTGQETVAQIKAHVASLEGIAPEDQVVLLAGAPLEDEATLGQCGVE 60

Query: 220 XXXXTVP---LLGGKVHGSLARAGKVKGQTPKVEKQQKRRRR 336
                     +LGGKVHGSLARAGKV+GQTPKV KQ+K++++
Sbjct: 61  ALTTLEVAGRMLGGKVHGSLARAGKVRGQTPKVAKQEKKKKK 102



 Score = 58.4 bits (135), Expect = 1e-08
 Identities = 24/30 (80%), Positives = 29/30 (96%)
 Frame = +3

Query: 339 GRAKRRIQYNRRFVNVVQTFGRRRGPNSNS 428
           GRAKRR+QYNRRFVNVV TFG+++GPN+NS
Sbjct: 104 GRAKRRMQYNRRFVNVVPTFGKKKGPNANS 133


>X75315-1|CAA53064.1|  230|Homo sapiens SEB4B protein.
          Length = 230

 Score = 40.7 bits (91), Expect = 0.003
 Identities = 16/21 (76%), Positives = 20/21 (95%)
 Frame = +3

Query: 351 RRIQYNRRFVNVVQTFGRRRG 413
           RR+QYNRRFVNVV TFG+++G
Sbjct: 1   RRMQYNRRFVNVVPTFGKKKG 21


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 59,988,653
Number of Sequences: 237096
Number of extensions: 1005300
Number of successful extensions: 6142
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 6069
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6136
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 4327667848
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)