Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc12o01
(352 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF347693-1|AAQ15051.1| 1538|Homo sapiens multiple asters 1 protein. 33 0.19
AB014522-1|BAA31597.1| 1289|Homo sapiens KIAA0622 protein protein. 33 0.19
X62515-1|CAA44373.1| 4393|Homo sapiens Human basement membrane h... 31 1.0
AF091395-1|AAC43042.1| 3038|Homo sapiens Trio isoform protein. 31 1.0
AB209754-1|BAD92991.1| 2202|Homo sapiens triple functional domai... 31 1.0
Z74615-1|CAA98968.1| 1464|Homo sapiens prepro-alpha1(I) collagen... 31 1.4
X98705-1|CAA67261.1| 1069|Homo sapiens collagen type I alpha 1 p... 31 1.4
M85289-1|AAA52700.1| 4391|Homo sapiens heparan sulfate proteogly... 31 1.4
M11162-1|AAA75386.1| 138|Homo sapiens alpha-1 type I collagen p... 31 1.4
K01228-1|AAA51995.1| 1040|Homo sapiens COL1A1 protein. 31 1.4
BC036531-1|AAH36531.1| 1464|Homo sapiens collagen, type I, alpha... 31 1.4
AL590556-2|CAH71870.1| 4391|Homo sapiens heparan sulfate proteog... 31 1.4
AL590103-2|CAI12125.1| 4391|Homo sapiens heparan sulfate proteog... 31 1.4
AL445795-1|CAC18534.1| 4370|Homo sapiens heparan sulfate proteog... 31 1.4
AF017178-1|AAB94054.2| 1461|Homo sapiens pro alpha 1(I) collagen... 31 1.4
AB209597-1|BAD92834.1| 1467|Homo sapiens Collagen alpha 1 chain ... 31 1.4
D86425-1|BAA13087.1| 1376|Homo sapiens osteonidogen protein. 30 1.8
BX538231-1|CAD98074.1| 530|Homo sapiens hypothetical protein pr... 30 1.8
AB040958-1|BAA96049.2| 1135|Homo sapiens KIAA1525 protein protein. 30 1.8
AB009799-1|BAA24112.1| 1376|Homo sapiens osteonidogen protein. 30 1.8
Z37976-1|CAA86030.1| 1821|Homo sapiens LTBP-2 precursor protein. 30 2.4
S82451-1|AAB37459.1| 1821|Homo sapiens latent transforming growt... 30 2.4
BC078659-1|AAH78659.1| 1821|Homo sapiens latent transforming gro... 30 2.4
AC013451-1|AAF87081.1| 969|Homo sapiens LTBP-2 protein. 30 2.4
BX537373-1|CAD97615.1| 255|Homo sapiens hypothetical protein pr... 29 4.1
AY017307-1|AAG52948.1| 3389|Homo sapiens CUB and sushi multiple ... 29 4.1
AF333704-1|AAK73475.2| 3566|Homo sapiens CUB and sushi multiple ... 29 4.1
AB209502-1|BAD92739.1| 2966|Homo sapiens CUB and Sushi multiple ... 29 4.1
AB066564-1|BAB62266.1| 257|Homo sapiens HCCA2 protein. 29 4.1
AB028173-1|BAB18568.1| 255|Homo sapiens HCCA2 protein. 29 4.1
K03179-1|AAA51847.1| 136|Homo sapiens COL1A1 protein. 29 5.5
BC110491-1|AAI10492.1| 621|Homo sapiens kelch repeat and BTB (P... 29 5.5
BC071556-1|AAH71556.1| 1244|Homo sapiens TTBK2 protein protein. 29 5.5
BC034988-1|AAH34988.1| 1036|Homo sapiens ULK2 protein protein. 29 5.5
AY177390-1|AAO06908.1| 621|Homo sapiens sarcosynapsin protein. 29 5.5
AY176040-1|AAO22141.1| 621|Homo sapiens sarcosynapsin protein. 29 5.5
AK131372-1|BAD18523.1| 1167|Homo sapiens protein ( Homo sapiens ... 29 5.5
AK056577-1|BAB71222.1| 472|Homo sapiens protein ( Homo sapiens ... 29 5.5
AF525400-1|AAO14996.1| 1649|Homo sapiens tau-tubulin kinase prot... 29 5.5
AB020654-1|BAA74870.1| 645|Homo sapiens KIAA0847 protein protein. 29 5.5
AB014527-1|BAA31602.1| 1324|Homo sapiens KIAA0627 protein protein. 29 5.5
AB014523-1|BAA31598.2| 1100|Homo sapiens KIAA0623 protein protein. 29 5.5
Z84466-2|CAI42462.1| 705|Homo sapiens synapsin I protein. 28 7.2
Z84466-1|CAI42461.1| 669|Homo sapiens synapsin I protein. 28 7.2
U58917-1|AAB99730.1| 866|Homo sapiens IL-17 receptor protein. 28 7.2
M58378-2|AAC41931.1| 670|Homo sapiens synapsin Ib protein. 28 7.2
M58378-1|AAC41930.1| 705|Homo sapiens synapsin I protein. 28 7.2
CT841520-1|CAJ86450.1| 866|Homo sapiens IL17R protein. 28 7.2
BC126479-1|AAI26480.1| 200|Homo sapiens chromosome 4 open readi... 28 7.2
BC126477-1|AAI26478.1| 200|Homo sapiens chromosome 4 open readi... 28 7.2
BC011624-1|AAH11624.1| 866|Homo sapiens interleukin 17 receptor... 28 7.2
AL009172-2|CAI42446.1| 705|Homo sapiens synapsin I protein. 28 7.2
AL009172-1|CAI42445.1| 669|Homo sapiens synapsin I protein. 28 7.2
AK055004-1|BAB70838.1| 599|Homo sapiens protein ( Homo sapiens ... 28 7.2
AK054839-1|BAB70812.1| 200|Homo sapiens protein ( Homo sapiens ... 28 7.2
AB061798-1|BAC10986.1| 514|Homo sapiens HBE269 protein. 28 7.2
X87248-1|CAA60698.1| 341|Homo sapiens HP8 peptide protein. 28 9.5
X70944-1|CAA50283.1| 707|Homo sapiens PTB-associated splicing f... 28 9.5
BC107864-1|AAI07865.1| 385|Homo sapiens ZC3H13 protein protein. 28 9.5
BC051192-1|AAH51192.1| 707|Homo sapiens splicing factor proline... 28 9.5
BC032425-1|AAH32425.1| 469|Homo sapiens ZC3H13 protein protein. 28 9.5
BC027708-1|AAH27708.1| 525|Homo sapiens SFPQ protein protein. 28 9.5
BC025276-1|AAH25276.2| 556|Homo sapiens UTP18, small subunit (S... 28 9.5
BC004534-1|AAH04534.2| 634|Homo sapiens SFPQ protein protein. 28 9.5
AY358440-1|AAQ89948.1| 703|Homo sapiens NSP3 protein. 28 9.5
AY283618-1|AAP37483.1| 1564|Homo sapiens hypothetical protein pr... 28 9.5
AL831833-1|CAD38544.1| 796|Homo sapiens hypothetical protein pr... 28 9.5
AL590434-2|CAI12467.1| 707|Homo sapiens splicing factor proline... 28 9.5
AL445232-2|CAI16506.2| 1564|Homo sapiens zinc finger CCCH-type c... 28 9.5
AL445232-1|CAI16505.1| 1668|Homo sapiens zinc finger CCCH-type c... 28 9.5
AL157758-3|CAM13064.1| 1564|Homo sapiens zinc finger CCCH-type c... 28 9.5
AL157758-2|CAI10903.1| 1668|Homo sapiens zinc finger CCCH-type c... 28 9.5
AF151806-1|AAD34043.1| 521|Homo sapiens CGI-48 protein protein. 28 9.5
AF124251-1|AAD28246.1| 703|Homo sapiens SH2-containing protein ... 28 9.5
AB065557-1|BAC45258.1| 542|Homo sapiens seven transmembrane hel... 28 9.5
>AF347693-1|AAQ15051.1| 1538|Homo sapiens multiple asters 1 protein.
Length = 1538
Score = 33.5 bits (73), Expect = 0.19
Identities = 20/61 (32%), Positives = 28/61 (45%), Gaps = 3/61 (4%)
Frame = -1
Query: 349 PPVHPSGRCRAV---SRDIRTTTEARRPGTARNTRRPKPTELSVCCRERSETPRHRNKPS 179
PPV PS R+ S+ T R G AR++R P+P+ C R+ S P+
Sbjct: 708 PPVTPSSEKRSKIPRSQGCSRETSPNRIGLARSSRIPRPSMSQGCSRDTSRESSRDTSPA 767
Query: 178 R 176
R
Sbjct: 768 R 768
>AB014522-1|BAA31597.1| 1289|Homo sapiens KIAA0622 protein protein.
Length = 1289
Score = 33.5 bits (73), Expect = 0.19
Identities = 20/61 (32%), Positives = 28/61 (45%), Gaps = 3/61 (4%)
Frame = -1
Query: 349 PPVHPSGRCRAV---SRDIRTTTEARRPGTARNTRRPKPTELSVCCRERSETPRHRNKPS 179
PPV PS R+ S+ T R G AR++R P+P+ C R+ S P+
Sbjct: 459 PPVTPSSEKRSKIPRSQGCSRETSPNRIGLARSSRIPRPSMSQGCSRDTSRESSRDTSPA 518
Query: 178 R 176
R
Sbjct: 519 R 519
>X62515-1|CAA44373.1| 4393|Homo sapiens Human basement membrane
heparan sulfate proteoglycan core protein protein.
Length = 4393
Score = 31.1 bits (67), Expect = 1.0
Identities = 15/51 (29%), Positives = 24/51 (47%)
Frame = -1
Query: 346 PVHPSGRCRAVSRDIRTTTEARRPGTARNTRRPKPTELSVCCRERSETPRH 194
P+ P G+CR V+++I E GT+ R K + C E ++ H
Sbjct: 864 PIQPGGKCRPVNQEIVRCDERGSMGTSGEACRCKNNVVGRLCNECADRSFH 914
>AF091395-1|AAC43042.1| 3038|Homo sapiens Trio isoform protein.
Length = 3038
Score = 31.1 bits (67), Expect = 1.0
Identities = 16/29 (55%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
Frame = -2
Query: 351 PRRSTPPGGAEP*AGTSGPPQR-PGAQAQ 268
P S PP GA P AG S P +R PGA A+
Sbjct: 2313 PGPSLPPPGAAPEAGPSAPSRRPPGADAE 2341
>AB209754-1|BAD92991.1| 2202|Homo sapiens triple functional domain
(PTPRF interacting) variant protein.
Length = 2202
Score = 31.1 bits (67), Expect = 1.0
Identities = 16/29 (55%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
Frame = -2
Query: 351 PRRSTPPGGAEP*AGTSGPPQR-PGAQAQ 268
P S PP GA P AG S P +R PGA A+
Sbjct: 2011 PGPSLPPPGAAPEAGPSAPSRRPPGADAE 2039
>Z74615-1|CAA98968.1| 1464|Homo sapiens prepro-alpha1(I) collagen
protein.
Length = 1464
Score = 30.7 bits (66), Expect = 1.4
Identities = 19/52 (36%), Positives = 24/52 (46%)
Frame = -2
Query: 345 RSTPPGGAEP*AGTSGPPQRPGAQAQRETLGVRSRQS*AFAAGSAQRRPVTG 190
++ PPG A G GPP PGA+ Q +G + A G A R V G
Sbjct: 552 KTGPPGPAGQ-DGRPGPPGPPGARGQAGVMGFPGPKGAAGEPGKAGERGVPG 602
>X98705-1|CAA67261.1| 1069|Homo sapiens collagen type I alpha 1
protein.
Length = 1069
Score = 30.7 bits (66), Expect = 1.4
Identities = 19/52 (36%), Positives = 24/52 (46%)
Frame = -2
Query: 345 RSTPPGGAEP*AGTSGPPQRPGAQAQRETLGVRSRQS*AFAAGSAQRRPVTG 190
++ PPG A G GPP PGA+ Q +G + A G A R V G
Sbjct: 552 KTGPPGPAGQ-DGRPGPPGPPGARGQAGVMGFPGPKGAAGEPGKAGERGVPG 602
>M85289-1|AAA52700.1| 4391|Homo sapiens heparan sulfate proteoglycan
protein.
Length = 4391
Score = 30.7 bits (66), Expect = 1.4
Identities = 15/51 (29%), Positives = 24/51 (47%)
Frame = -1
Query: 346 PVHPSGRCRAVSRDIRTTTEARRPGTARNTRRPKPTELSVCCRERSETPRH 194
P+ P G+CR V+++I E GT+ R K + C E ++ H
Sbjct: 862 PIQPGGKCRPVNQEIVRCDERGSMGTSGEACRCKNNVVGRLCNECADGSFH 912
>M11162-1|AAA75386.1| 138|Homo sapiens alpha-1 type I collagen
protein.
Length = 138
Score = 30.7 bits (66), Expect = 1.4
Identities = 19/52 (36%), Positives = 24/52 (46%)
Frame = -2
Query: 345 RSTPPGGAEP*AGTSGPPQRPGAQAQRETLGVRSRQS*AFAAGSAQRRPVTG 190
++ PPG A G GPP PGA+ Q +G + A G A R V G
Sbjct: 65 KTGPPGPAGQ-DGRPGPPGPPGARGQAGVMGFPGPKGAAGEPGKAGERGVPG 115
>K01228-1|AAA51995.1| 1040|Homo sapiens COL1A1 protein.
Length = 1040
Score = 30.7 bits (66), Expect = 1.4
Identities = 19/52 (36%), Positives = 24/52 (46%)
Frame = -2
Query: 345 RSTPPGGAEP*AGTSGPPQRPGAQAQRETLGVRSRQS*AFAAGSAQRRPVTG 190
++ PPG A G GPP PGA+ Q +G + A G A R V G
Sbjct: 128 KTGPPGPAGQ-DGRPGPPGPPGARGQAGVMGFPGPKGAAGEPGKAGERGVPG 178
>BC036531-1|AAH36531.1| 1464|Homo sapiens collagen, type I, alpha 1
protein.
Length = 1464
Score = 30.7 bits (66), Expect = 1.4
Identities = 19/52 (36%), Positives = 24/52 (46%)
Frame = -2
Query: 345 RSTPPGGAEP*AGTSGPPQRPGAQAQRETLGVRSRQS*AFAAGSAQRRPVTG 190
++ PPG A G GPP PGA+ Q +G + A G A R V G
Sbjct: 552 KTGPPGPAGQ-DGRPGPPGPPGARGQAGVMGFPGPKGAAGEPGKAGERGVPG 602
>AL590556-2|CAH71870.1| 4391|Homo sapiens heparan sulfate proteoglycan
2 protein.
Length = 4391
Score = 30.7 bits (66), Expect = 1.4
Identities = 15/51 (29%), Positives = 24/51 (47%)
Frame = -1
Query: 346 PVHPSGRCRAVSRDIRTTTEARRPGTARNTRRPKPTELSVCCRERSETPRH 194
P+ P G+CR V+++I E GT+ R K + C E ++ H
Sbjct: 862 PIQPGGKCRPVNQEIVRCDERGSMGTSGEACRCKNNVVGRLCNECADGSFH 912
>AL590103-2|CAI12125.1| 4391|Homo sapiens heparan sulfate proteoglycan
2 protein.
Length = 4391
Score = 30.7 bits (66), Expect = 1.4
Identities = 15/51 (29%), Positives = 24/51 (47%)
Frame = -1
Query: 346 PVHPSGRCRAVSRDIRTTTEARRPGTARNTRRPKPTELSVCCRERSETPRH 194
P+ P G+CR V+++I E GT+ R K + C E ++ H
Sbjct: 862 PIQPGGKCRPVNQEIVRCDERGSMGTSGEACRCKNNVVGRLCNECADGSFH 912
>AL445795-1|CAC18534.1| 4370|Homo sapiens heparan sulfate
proteoglycan perlecan protein.
Length = 4370
Score = 30.7 bits (66), Expect = 1.4
Identities = 15/51 (29%), Positives = 24/51 (47%)
Frame = -1
Query: 346 PVHPSGRCRAVSRDIRTTTEARRPGTARNTRRPKPTELSVCCRERSETPRH 194
P+ P G+CR V+++I E GT+ R K + C E ++ H
Sbjct: 841 PIQPGGKCRPVNQEIVRCDERGSMGTSGEACRCKNNVVGRLCNECADGSFH 891
>AF017178-1|AAB94054.2| 1461|Homo sapiens pro alpha 1(I) collagen
protein.
Length = 1461
Score = 30.7 bits (66), Expect = 1.4
Identities = 19/52 (36%), Positives = 24/52 (46%)
Frame = -2
Query: 345 RSTPPGGAEP*AGTSGPPQRPGAQAQRETLGVRSRQS*AFAAGSAQRRPVTG 190
++ PPG A G GPP PGA+ Q +G + A G A R V G
Sbjct: 549 KTGPPGPAGQ-DGRPGPPGPPGARGQAGVMGFPGPKGAAGEPGKAGERGVPG 599
>AB209597-1|BAD92834.1| 1467|Homo sapiens Collagen alpha 1 chain
precursor variant protein.
Length = 1467
Score = 30.7 bits (66), Expect = 1.4
Identities = 19/52 (36%), Positives = 24/52 (46%)
Frame = -2
Query: 345 RSTPPGGAEP*AGTSGPPQRPGAQAQRETLGVRSRQS*AFAAGSAQRRPVTG 190
++ PPG A G GPP PGA+ Q +G + A G A R V G
Sbjct: 555 KTGPPGPAGQ-DGRPGPPGPPGARGQAGVMGFPGPKGAAGEPGKAGERGVPG 605
>D86425-1|BAA13087.1| 1376|Homo sapiens osteonidogen protein.
Length = 1376
Score = 30.3 bits (65), Expect = 1.8
Identities = 17/48 (35%), Positives = 21/48 (43%)
Frame = +2
Query: 149 VWTPSRPNRSRRFIPVTGRL*ALPAANAQLCRLRTPSVSRCAWAPGLC 292
+WT P SR P+ R A A+ C RTP AW P +C
Sbjct: 95 MWTMISPPTSRPS-PLFWRTSTRATAEAESCTERTPPPQCWAWPPAMC 141
>BX538231-1|CAD98074.1| 530|Homo sapiens hypothetical protein
protein.
Length = 530
Score = 30.3 bits (65), Expect = 1.8
Identities = 15/36 (41%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Frame = +2
Query: 239 CRLRTPSVSRCAWAPGLCG--GPDVPAHGSAPPGGV 340
CR TP++SR +P G GPD+ +H A P G+
Sbjct: 478 CRPSTPALSRRTPSPSQGGYFGPDLYSHNKASPSGL 513
>AB040958-1|BAA96049.2| 1135|Homo sapiens KIAA1525 protein protein.
Length = 1135
Score = 30.3 bits (65), Expect = 1.8
Identities = 15/36 (41%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Frame = +2
Query: 239 CRLRTPSVSRCAWAPGLCG--GPDVPAHGSAPPGGV 340
CR TP++SR +P G GPD+ +H A P G+
Sbjct: 956 CRPSTPALSRRTPSPSQGGYFGPDLYSHNKASPSGL 991
>AB009799-1|BAA24112.1| 1376|Homo sapiens osteonidogen protein.
Length = 1376
Score = 30.3 bits (65), Expect = 1.8
Identities = 17/48 (35%), Positives = 21/48 (43%)
Frame = +2
Query: 149 VWTPSRPNRSRRFIPVTGRL*ALPAANAQLCRLRTPSVSRCAWAPGLC 292
+WT P SR P+ R A A+ C RTP AW P +C
Sbjct: 95 MWTMISPPTSRPS-PLFWRTSTRATAEAESCTERTPPPQCWAWPPAMC 141
>Z37976-1|CAA86030.1| 1821|Homo sapiens LTBP-2 precursor protein.
Length = 1821
Score = 29.9 bits (64), Expect = 2.4
Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 3/45 (6%)
Frame = -1
Query: 298 TTTEARRPGTARNTRRPKP---TELSVCCRERSETPRHRNKPSRP 173
T EARRP A+ +RR +P T S ++ PR R P+ P
Sbjct: 99 TEAEARRPSRAQQSRRVQPPAQTRRSTPLGQQQPAPRTRAAPALP 143
>S82451-1|AAB37459.1| 1821|Homo sapiens latent transforming growth
factor-beta-binding protein-2 protein.
Length = 1821
Score = 29.9 bits (64), Expect = 2.4
Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 3/45 (6%)
Frame = -1
Query: 298 TTTEARRPGTARNTRRPKP---TELSVCCRERSETPRHRNKPSRP 173
T EARRP A+ +RR +P T S ++ PR R P+ P
Sbjct: 99 TEAEARRPSRAQQSRRVQPPAQTRRSTPLGQQQPAPRTRAAPALP 143
>BC078659-1|AAH78659.1| 1821|Homo sapiens latent transforming growth
factor beta binding protein 2 protein.
Length = 1821
Score = 29.9 bits (64), Expect = 2.4
Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 3/45 (6%)
Frame = -1
Query: 298 TTTEARRPGTARNTRRPKP---TELSVCCRERSETPRHRNKPSRP 173
T EARRP A+ +RR +P T S ++ PR R P+ P
Sbjct: 99 TEAEARRPSRAQQSRRVQPPAQTRRSTPLGQQQPAPRTRAAPALP 143
>AC013451-1|AAF87081.1| 969|Homo sapiens LTBP-2 protein.
Length = 969
Score = 29.9 bits (64), Expect = 2.4
Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 3/45 (6%)
Frame = -1
Query: 298 TTTEARRPGTARNTRRPKP---TELSVCCRERSETPRHRNKPSRP 173
T EARRP A+ +RR +P T S ++ PR R P+ P
Sbjct: 99 TEAEARRPSRAQQSRRVQPPAQTRRSTPLGQQQPAPRTRAAPALP 143
>BX537373-1|CAD97615.1| 255|Homo sapiens hypothetical protein
protein.
Length = 255
Score = 29.1 bits (62), Expect = 4.1
Identities = 13/30 (43%), Positives = 15/30 (50%)
Frame = -2
Query: 345 RSTPPGGAEP*AGTSGPPQRPGAQAQRETL 256
R PG EP G PP R GA +ET+
Sbjct: 17 RQRGPGSTEPREGEMSPPGRTGAHVCKETV 46
>AY017307-1|AAG52948.1| 3389|Homo sapiens CUB and sushi multiple
domains protein 1 short form protein.
Length = 3389
Score = 29.1 bits (62), Expect = 4.1
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = +2
Query: 281 PGLCGGPDVPAHGS 322
PG CG P PAHGS
Sbjct: 2861 PGFCGDPGTPAHGS 2874
>AF333704-1|AAK73475.2| 3566|Homo sapiens CUB and sushi multiple
domains 1 protein protein.
Length = 3566
Score = 29.1 bits (62), Expect = 4.1
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = +2
Query: 281 PGLCGGPDVPAHGS 322
PG CG P PAHGS
Sbjct: 2919 PGFCGDPGTPAHGS 2932
>AB209502-1|BAD92739.1| 2966|Homo sapiens CUB and Sushi multiple
domains 1 variant protein.
Length = 2966
Score = 29.1 bits (62), Expect = 4.1
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = +2
Query: 281 PGLCGGPDVPAHGS 322
PG CG P PAHGS
Sbjct: 2334 PGFCGDPGTPAHGS 2347
>AB066564-1|BAB62266.1| 257|Homo sapiens HCCA2 protein.
Length = 257
Score = 29.1 bits (62), Expect = 4.1
Identities = 13/30 (43%), Positives = 15/30 (50%)
Frame = -2
Query: 345 RSTPPGGAEP*AGTSGPPQRPGAQAQRETL 256
R PG EP G PP R GA +ET+
Sbjct: 17 RQRGPGSTEPREGEMSPPGRTGAHVCKETV 46
>AB028173-1|BAB18568.1| 255|Homo sapiens HCCA2 protein.
Length = 255
Score = 29.1 bits (62), Expect = 4.1
Identities = 13/30 (43%), Positives = 15/30 (50%)
Frame = -2
Query: 345 RSTPPGGAEP*AGTSGPPQRPGAQAQRETL 256
R PG EP G PP R GA +ET+
Sbjct: 17 RQRGPGSTEPREGEMSPPGRTGAHVCKETV 46
>K03179-1|AAA51847.1| 136|Homo sapiens COL1A1 protein.
Length = 136
Score = 28.7 bits (61), Expect = 5.5
Identities = 18/52 (34%), Positives = 23/52 (44%)
Frame = -2
Query: 345 RSTPPGGAEP*AGTSGPPQRPGAQAQRETLGVRSRQS*AFAAGSAQRRPVTG 190
++ PPG A G GPP PGA+ Q +G + A G R V G
Sbjct: 81 KTGPPGPAGQ-DGRPGPPGPPGARGQAGVMGFPGPKGAAGEPGKRGERGVPG 131
>BC110491-1|AAI10492.1| 621|Homo sapiens kelch repeat and BTB (POZ)
domain containing 5 protein.
Length = 621
Score = 28.7 bits (61), Expect = 5.5
Identities = 13/44 (29%), Positives = 23/44 (52%)
Frame = -3
Query: 335 LRAVQSREQGHQDHHRGPAPRHSEKHSASEADRAERLLPGALRD 204
+ ++ +++G A + + K A E + AER+LPG L D
Sbjct: 265 ITTLRKKKKGKDGAGAKEADKGTSKAKAEEDEEAERILPGILND 308
>BC071556-1|AAH71556.1| 1244|Homo sapiens TTBK2 protein protein.
Length = 1244
Score = 28.7 bits (61), Expect = 5.5
Identities = 21/60 (35%), Positives = 30/60 (50%), Gaps = 4/60 (6%)
Frame = -1
Query: 313 SRDIRTTTEARRPGTARNTRRPKPTELSVCCRERSETPRHRNKP----SRPVWSRRSPHH 146
S+ R+TT+ + PG+ N + P P V R S +PR + P S P + R PHH
Sbjct: 1119 SQKPRSTTQCKSPGSPHNPKTP-PKSPVVPRRSPSASPRSSSLPRTSSSSPSRAGR-PHH 1176
>BC034988-1|AAH34988.1| 1036|Homo sapiens ULK2 protein protein.
Length = 1036
Score = 28.7 bits (61), Expect = 5.5
Identities = 19/49 (38%), Positives = 22/49 (44%), Gaps = 8/49 (16%)
Frame = +2
Query: 212 ALPAANAQLCRLRTPSV-------SRCAWAPGLC-GGPDVPAHGSAPPG 334
A P R RT SV S CA + +C G P P GS+PPG
Sbjct: 735 AAPTCTHMFLRTRTTSVGPSNSGGSLCAMSGRVCVGSPPGPGFGSSPPG 783
>AY177390-1|AAO06908.1| 621|Homo sapiens sarcosynapsin protein.
Length = 621
Score = 28.7 bits (61), Expect = 5.5
Identities = 13/44 (29%), Positives = 23/44 (52%)
Frame = -3
Query: 335 LRAVQSREQGHQDHHRGPAPRHSEKHSASEADRAERLLPGALRD 204
+ ++ +++G A + + K A E + AER+LPG L D
Sbjct: 265 ITTLRKKKKGKDGAGAKEADKGTSKAKAEEDEEAERILPGILND 308
>AY176040-1|AAO22141.1| 621|Homo sapiens sarcosynapsin protein.
Length = 621
Score = 28.7 bits (61), Expect = 5.5
Identities = 13/44 (29%), Positives = 23/44 (52%)
Frame = -3
Query: 335 LRAVQSREQGHQDHHRGPAPRHSEKHSASEADRAERLLPGALRD 204
+ ++ +++G A + + K A E + AER+LPG L D
Sbjct: 265 ITTLRKKKKGKDGAGAKEADKGTSKAKAEEDEEAERILPGILND 308
>AK131372-1|BAD18523.1| 1167|Homo sapiens protein ( Homo sapiens cDNA
FLJ16421 fis, clone BRACE3003920, weakly similar to
Serine/threonine-protein kinase K06H7.1 in chromosome III
(EC 2.7.1.-). ).
Length = 1167
Score = 28.7 bits (61), Expect = 5.5
Identities = 21/60 (35%), Positives = 30/60 (50%), Gaps = 4/60 (6%)
Frame = -1
Query: 313 SRDIRTTTEARRPGTARNTRRPKPTELSVCCRERSETPRHRNKP----SRPVWSRRSPHH 146
S+ R+TT+ + PG+ N + P P V R S +PR + P S P + R PHH
Sbjct: 1050 SQKPRSTTQCKSPGSPHNPKTP-PKSPVVPRRSPSASPRSSSLPRTSSSSPSRAGR-PHH 1107
>AK056577-1|BAB71222.1| 472|Homo sapiens protein ( Homo sapiens
cDNA FLJ32015 fis, clone NTONG1000052, weakly similar to
Rattus norvegicus mRNA for Kelch related protein 1. ).
Length = 472
Score = 28.7 bits (61), Expect = 5.5
Identities = 13/44 (29%), Positives = 23/44 (52%)
Frame = -3
Query: 335 LRAVQSREQGHQDHHRGPAPRHSEKHSASEADRAERLLPGALRD 204
+ ++ +++G A + + K A E + AER+LPG L D
Sbjct: 265 ITTLRKKKKGKDGAGAKEADKGTSKAKAEEDEEAERILPGILND 308
>AF525400-1|AAO14996.1| 1649|Homo sapiens tau-tubulin kinase protein.
Length = 1649
Score = 28.7 bits (61), Expect = 5.5
Identities = 21/60 (35%), Positives = 30/60 (50%), Gaps = 4/60 (6%)
Frame = -1
Query: 313 SRDIRTTTEARRPGTARNTRRPKPTELSVCCRERSETPRHRNKP----SRPVWSRRSPHH 146
S+ R+TT+ + PG+ N + P P V R S +PR + P S P + R PHH
Sbjct: 1524 SQKPRSTTQCKSPGSPHNPKTP-PKSPVVPRRSPSASPRSSSLPRTSSSSPSRAGR-PHH 1581
>AB020654-1|BAA74870.1| 645|Homo sapiens KIAA0847 protein protein.
Length = 645
Score = 28.7 bits (61), Expect = 5.5
Identities = 21/60 (35%), Positives = 30/60 (50%), Gaps = 4/60 (6%)
Frame = -1
Query: 313 SRDIRTTTEARRPGTARNTRRPKPTELSVCCRERSETPRHRNKP----SRPVWSRRSPHH 146
S+ R+TT+ + PG+ N + P P V R S +PR + P S P + R PHH
Sbjct: 520 SQKPRSTTQCKSPGSPHNPKTP-PKSPVVPRRSPSASPRSSSLPRTSSSSPSRAGR-PHH 577
>AB014527-1|BAA31602.1| 1324|Homo sapiens KIAA0627 protein protein.
Length = 1324
Score = 28.7 bits (61), Expect = 5.5
Identities = 15/45 (33%), Positives = 19/45 (42%)
Frame = -1
Query: 280 RPGTARNTRRPKPTELSVCCRERSETPRHRNKPSRPVWSRRSPHH 146
R AR++R P+P+ C RE S P R S HH
Sbjct: 540 RLSVARSSRIPRPSVSQGCSREASRESSRDTSPVRSFQPLASRHH 584
>AB014523-1|BAA31598.2| 1100|Homo sapiens KIAA0623 protein protein.
Length = 1100
Score = 28.7 bits (61), Expect = 5.5
Identities = 19/49 (38%), Positives = 22/49 (44%), Gaps = 8/49 (16%)
Frame = +2
Query: 212 ALPAANAQLCRLRTPSV-------SRCAWAPGLC-GGPDVPAHGSAPPG 334
A P R RT SV S CA + +C G P P GS+PPG
Sbjct: 799 AAPTCTHMFLRTRTTSVGPSNSGGSLCAMSGRVCVGSPPGPGFGSSPPG 847
>Z84466-2|CAI42462.1| 705|Homo sapiens synapsin I protein.
Length = 705
Score = 28.3 bits (60), Expect = 7.2
Identities = 24/70 (34%), Positives = 28/70 (40%), Gaps = 5/70 (7%)
Frame = +2
Query: 158 PSRPNRSRRFIPVTGRL*ALPAANAQLCRLRTPSVSRCAWAPGLC-----GGPDVPAHGS 322
P + R+ PV G A PAA +PS R A P GP P
Sbjct: 524 PPTQGQGRQSRPVAGGPGAPPAARPPA----SPSPQRQAGPPQATRQTSVSGPAPPKASG 579
Query: 323 APPGGVDRRG 352
APPGG R+G
Sbjct: 580 APPGGQQRQG 589
>Z84466-1|CAI42461.1| 669|Homo sapiens synapsin I protein.
Length = 669
Score = 28.3 bits (60), Expect = 7.2
Identities = 24/70 (34%), Positives = 28/70 (40%), Gaps = 5/70 (7%)
Frame = +2
Query: 158 PSRPNRSRRFIPVTGRL*ALPAANAQLCRLRTPSVSRCAWAPGLC-----GGPDVPAHGS 322
P + R+ PV G A PAA +PS R A P GP P
Sbjct: 524 PPTQGQGRQSRPVAGGPGAPPAARPPA----SPSPQRQAGPPQATRQTSVSGPAPPKASG 579
Query: 323 APPGGVDRRG 352
APPGG R+G
Sbjct: 580 APPGGQQRQG 589
>U58917-1|AAB99730.1| 866|Homo sapiens IL-17 receptor protein.
Length = 866
Score = 28.3 bits (60), Expect = 7.2
Identities = 16/42 (38%), Positives = 18/42 (42%)
Frame = -3
Query: 293 HRGPAPRHSEKHSASEADRAERLLPGALRDAPSPE*TFSTCL 168
H PAPR E H S R L G R + FS+CL
Sbjct: 250 HHIPAPRPEEFHQRSNVTLTLRNLKGCCRHQVQIQPFFSSCL 291
>M58378-2|AAC41931.1| 670|Homo sapiens synapsin Ib protein.
Length = 670
Score = 28.3 bits (60), Expect = 7.2
Identities = 24/70 (34%), Positives = 28/70 (40%), Gaps = 5/70 (7%)
Frame = +2
Query: 158 PSRPNRSRRFIPVTGRL*ALPAANAQLCRLRTPSVSRCAWAPGLC-----GGPDVPAHGS 322
P + R+ PV G A PAA +PS R A P GP P
Sbjct: 524 PPTQGQGRQSRPVAGGPGAPPAARPPA----SPSPQRQAGPPQATRQTSVSGPAPPKASG 579
Query: 323 APPGGVDRRG 352
APPGG R+G
Sbjct: 580 APPGGQQRQG 589
>M58378-1|AAC41930.1| 705|Homo sapiens synapsin I protein.
Length = 705
Score = 28.3 bits (60), Expect = 7.2
Identities = 24/70 (34%), Positives = 28/70 (40%), Gaps = 5/70 (7%)
Frame = +2
Query: 158 PSRPNRSRRFIPVTGRL*ALPAANAQLCRLRTPSVSRCAWAPGLC-----GGPDVPAHGS 322
P + R+ PV G A PAA +PS R A P GP P
Sbjct: 524 PPTQGQGRQSRPVAGGPGAPPAARPPA----SPSPQRQAGPPQATRQTSVSGPAPPKASG 579
Query: 323 APPGGVDRRG 352
APPGG R+G
Sbjct: 580 APPGGQQRQG 589
>CT841520-1|CAJ86450.1| 866|Homo sapiens IL17R protein.
Length = 866
Score = 28.3 bits (60), Expect = 7.2
Identities = 16/42 (38%), Positives = 18/42 (42%)
Frame = -3
Query: 293 HRGPAPRHSEKHSASEADRAERLLPGALRDAPSPE*TFSTCL 168
H PAPR E H S R L G R + FS+CL
Sbjct: 250 HHIPAPRPEEFHQRSNVTLTLRNLKGCCRHQVQIQPFFSSCL 291
>BC126479-1|AAI26480.1| 200|Homo sapiens chromosome 4 open reading
frame 38 protein.
Length = 200
Score = 28.3 bits (60), Expect = 7.2
Identities = 19/62 (30%), Positives = 25/62 (40%), Gaps = 1/62 (1%)
Frame = -2
Query: 351 PRRSTP-PGGAEP*AGTSGPPQRPGAQAQRETLGVRSRQS*AFAAGSAQRRPVTGINLLD 175
PR TP PGG P A +GP ++ ++ G R G R P + LL
Sbjct: 138 PRDRTPAPGGTMPGAALAGPGRQASGSPAPQSEGAPPRPWTPLQPGLHHRPPSSSSGLLS 197
Query: 174 LF 169
F
Sbjct: 198 SF 199
>BC126477-1|AAI26478.1| 200|Homo sapiens chromosome 4 open reading
frame 38 protein.
Length = 200
Score = 28.3 bits (60), Expect = 7.2
Identities = 19/62 (30%), Positives = 25/62 (40%), Gaps = 1/62 (1%)
Frame = -2
Query: 351 PRRSTP-PGGAEP*AGTSGPPQRPGAQAQRETLGVRSRQS*AFAAGSAQRRPVTGINLLD 175
PR TP PGG P A +GP ++ ++ G R G R P + LL
Sbjct: 138 PRDRTPAPGGTMPGAALAGPGRQASGSPAPQSEGAPPRPWTPLQPGLHHRPPSSSSGLLS 197
Query: 174 LF 169
F
Sbjct: 198 SF 199
>BC011624-1|AAH11624.1| 866|Homo sapiens interleukin 17 receptor A
protein.
Length = 866
Score = 28.3 bits (60), Expect = 7.2
Identities = 16/42 (38%), Positives = 18/42 (42%)
Frame = -3
Query: 293 HRGPAPRHSEKHSASEADRAERLLPGALRDAPSPE*TFSTCL 168
H PAPR E H S R L G R + FS+CL
Sbjct: 250 HHIPAPRPEEFHQRSNVTLTLRNLKGCCRHQVQIQPFFSSCL 291
>AL009172-2|CAI42446.1| 705|Homo sapiens synapsin I protein.
Length = 705
Score = 28.3 bits (60), Expect = 7.2
Identities = 24/70 (34%), Positives = 28/70 (40%), Gaps = 5/70 (7%)
Frame = +2
Query: 158 PSRPNRSRRFIPVTGRL*ALPAANAQLCRLRTPSVSRCAWAPGLC-----GGPDVPAHGS 322
P + R+ PV G A PAA +PS R A P GP P
Sbjct: 524 PPTQGQGRQSRPVAGGPGAPPAARPPA----SPSPQRQAGPPQATRQTSVSGPAPPKASG 579
Query: 323 APPGGVDRRG 352
APPGG R+G
Sbjct: 580 APPGGQQRQG 589
>AL009172-1|CAI42445.1| 669|Homo sapiens synapsin I protein.
Length = 669
Score = 28.3 bits (60), Expect = 7.2
Identities = 24/70 (34%), Positives = 28/70 (40%), Gaps = 5/70 (7%)
Frame = +2
Query: 158 PSRPNRSRRFIPVTGRL*ALPAANAQLCRLRTPSVSRCAWAPGLC-----GGPDVPAHGS 322
P + R+ PV G A PAA +PS R A P GP P
Sbjct: 524 PPTQGQGRQSRPVAGGPGAPPAARPPA----SPSPQRQAGPPQATRQTSVSGPAPPKASG 579
Query: 323 APPGGVDRRG 352
APPGG R+G
Sbjct: 580 APPGGQQRQG 589
>AK055004-1|BAB70838.1| 599|Homo sapiens protein ( Homo sapiens
cDNA FLJ30442 fis, clone BRACE2009212. ).
Length = 599
Score = 28.3 bits (60), Expect = 7.2
Identities = 13/44 (29%), Positives = 16/44 (36%)
Frame = +1
Query: 196 DGASLSAPGSKRSALSASDAECFSLCLGAGPLWWS*CPCSRLCT 327
DG L G L CF C G G ++W R+ T
Sbjct: 530 DGTRLQLAGVPVGVLRTPGLRCFYCCTGCGKVFWDGSHLGRVAT 573
>AK054839-1|BAB70812.1| 200|Homo sapiens protein ( Homo sapiens
cDNA FLJ30277 fis, clone BRACE2002752. ).
Length = 200
Score = 28.3 bits (60), Expect = 7.2
Identities = 19/62 (30%), Positives = 25/62 (40%), Gaps = 1/62 (1%)
Frame = -2
Query: 351 PRRSTP-PGGAEP*AGTSGPPQRPGAQAQRETLGVRSRQS*AFAAGSAQRRPVTGINLLD 175
PR TP PGG P A +GP ++ ++ G R G R P + LL
Sbjct: 138 PRDRTPAPGGTMPGAALAGPGRQASGSPAPQSEGAPPRPWTPLQPGLHHRPPSSSSGLLS 197
Query: 174 LF 169
F
Sbjct: 198 SF 199
>AB061798-1|BAC10986.1| 514|Homo sapiens HBE269 protein.
Length = 514
Score = 28.3 bits (60), Expect = 7.2
Identities = 13/44 (29%), Positives = 16/44 (36%)
Frame = +1
Query: 196 DGASLSAPGSKRSALSASDAECFSLCLGAGPLWWS*CPCSRLCT 327
DG L G L CF C G G ++W R+ T
Sbjct: 445 DGTRLQLAGVPVGVLRTPGLRCFYCCTGCGKVFWDGSHLGRVAT 488
>X87248-1|CAA60698.1| 341|Homo sapiens HP8 peptide protein.
Length = 341
Score = 27.9 bits (59), Expect = 9.5
Identities = 18/44 (40%), Positives = 19/44 (43%)
Frame = -1
Query: 283 RRPGTARNTRRPKPTELSVCCRERSETPRHRNKPSRPVWSRRSP 152
RRP T TRRP+ T C RS T PV RR P
Sbjct: 173 RRPRTRTRTRRPR-TWPPRTCSSRSRTAARPPCTCSPVTPRRRP 215
>X70944-1|CAA50283.1| 707|Homo sapiens PTB-associated splicing
factor protein.
Length = 707
Score = 27.9 bits (59), Expect = 9.5
Identities = 17/42 (40%), Positives = 19/42 (45%), Gaps = 5/42 (11%)
Frame = -3
Query: 344 GPPLRAVQSREQGHQDHHRGPAP-----RHSEKHSASEADRA 234
G P Q HQ HH+GP P R EK S SE +A
Sbjct: 239 GEPRGGRQHHPPYHQQHHQGPPPGGPGGRSEEKISDSEGFKA 280
>BC107864-1|AAI07865.1| 385|Homo sapiens ZC3H13 protein protein.
Length = 385
Score = 27.9 bits (59), Expect = 9.5
Identities = 13/38 (34%), Positives = 17/38 (44%)
Frame = -3
Query: 341 PPLRAVQSREQGHQDHHRGPAPRHSEKHSASEADRAER 228
PP RE+G DH R + H +H E R +R
Sbjct: 105 PPRHRSPMREKGRHDHER-TSQSHDRRHERREDTRGKR 141
>BC051192-1|AAH51192.1| 707|Homo sapiens splicing factor
proline/glutamine-rich (polypyrimidine tract binding
protein as protein.
Length = 707
Score = 27.9 bits (59), Expect = 9.5
Identities = 17/42 (40%), Positives = 19/42 (45%), Gaps = 5/42 (11%)
Frame = -3
Query: 344 GPPLRAVQSREQGHQDHHRGPAP-----RHSEKHSASEADRA 234
G P Q HQ HH+GP P R EK S SE +A
Sbjct: 239 GEPRGGRQHHPPYHQQHHQGPPPGGPGGRSEEKISDSEGFKA 280
>BC032425-1|AAH32425.1| 469|Homo sapiens ZC3H13 protein protein.
Length = 469
Score = 27.9 bits (59), Expect = 9.5
Identities = 13/38 (34%), Positives = 17/38 (44%)
Frame = -3
Query: 341 PPLRAVQSREQGHQDHHRGPAPRHSEKHSASEADRAER 228
PP RE+G DH R + H +H E R +R
Sbjct: 135 PPRHRSPMREKGRHDHER-TSQSHDRRHERREDTRGKR 171
>BC027708-1|AAH27708.1| 525|Homo sapiens SFPQ protein protein.
Length = 525
Score = 27.9 bits (59), Expect = 9.5
Identities = 17/42 (40%), Positives = 19/42 (45%), Gaps = 5/42 (11%)
Frame = -3
Query: 344 GPPLRAVQSREQGHQDHHRGPAP-----RHSEKHSASEADRA 234
G P Q HQ HH+GP P R EK S SE +A
Sbjct: 239 GEPRGGRQHHPPYHQQHHQGPPPGGPGGRSEEKISDSEGFKA 280
>BC025276-1|AAH25276.2| 556|Homo sapiens UTP18, small subunit (SSU)
processome component, homolog (yeast) protein.
Length = 556
Score = 27.9 bits (59), Expect = 9.5
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = -2
Query: 312 AGTSGPPQRPGAQAQRETLGVRSRQS*AFAAGSAQ 208
AG GPPQ+P +QR+ S + A A +A+
Sbjct: 33 AGPGGPPQKPAPSSQRKPPARPSAAAAAIAVAAAE 67
>BC004534-1|AAH04534.2| 634|Homo sapiens SFPQ protein protein.
Length = 634
Score = 27.9 bits (59), Expect = 9.5
Identities = 17/42 (40%), Positives = 19/42 (45%), Gaps = 5/42 (11%)
Frame = -3
Query: 344 GPPLRAVQSREQGHQDHHRGPAP-----RHSEKHSASEADRA 234
G P Q HQ HH+GP P R EK S SE +A
Sbjct: 166 GEPRGGRQHHPPYHQQHHQGPPPGGPGGRSEEKISDSEGFKA 207
>AY358440-1|AAQ89948.1| 703|Homo sapiens NSP3 protein.
Length = 703
Score = 27.9 bits (59), Expect = 9.5
Identities = 16/44 (36%), Positives = 22/44 (50%)
Frame = +2
Query: 203 RL*ALPAANAQLCRLRTPSVSRCAWAPGLCGGPDVPAHGSAPPG 334
R+ A PAA + +P V+RC+ P LC G HG + G
Sbjct: 267 RVHAAPAAPSATALPASP-VARCSSEPQLCPGSAPKTHGESDKG 309
>AY283618-1|AAP37483.1| 1564|Homo sapiens hypothetical protein
protein.
Length = 1564
Score = 27.9 bits (59), Expect = 9.5
Identities = 13/38 (34%), Positives = 17/38 (44%)
Frame = -3
Query: 341 PPLRAVQSREQGHQDHHRGPAPRHSEKHSASEADRAER 228
PP RE+G DH R + H +H E R +R
Sbjct: 388 PPRHRSPMREKGRHDHER-TSQSHDRRHERREDTRGKR 424
>AL831833-1|CAD38544.1| 796|Homo sapiens hypothetical protein
protein.
Length = 796
Score = 27.9 bits (59), Expect = 9.5
Identities = 13/38 (34%), Positives = 17/38 (44%)
Frame = -3
Query: 341 PPLRAVQSREQGHQDHHRGPAPRHSEKHSASEADRAER 228
PP RE+G DH R + H +H E R +R
Sbjct: 213 PPRHRSPMREKGRHDHER-TSQSHDRRHERREDTRGKR 249
>AL590434-2|CAI12467.1| 707|Homo sapiens splicing factor
proline/glutamine-rich (polypyrimidine tract binding
protein as protein.
Length = 707
Score = 27.9 bits (59), Expect = 9.5
Identities = 17/42 (40%), Positives = 19/42 (45%), Gaps = 5/42 (11%)
Frame = -3
Query: 344 GPPLRAVQSREQGHQDHHRGPAP-----RHSEKHSASEADRA 234
G P Q HQ HH+GP P R EK S SE +A
Sbjct: 239 GEPRGGRQHHPPYHQQHHQGPPPGGPGGRSEEKISDSEGFKA 280
>AL445232-2|CAI16506.2| 1564|Homo sapiens zinc finger CCCH-type
containing 13 protein.
Length = 1564
Score = 27.9 bits (59), Expect = 9.5
Identities = 13/38 (34%), Positives = 17/38 (44%)
Frame = -3
Query: 341 PPLRAVQSREQGHQDHHRGPAPRHSEKHSASEADRAER 228
PP RE+G DH R + H +H E R +R
Sbjct: 388 PPRHRSPMREKGRHDHER-TSQSHDRRHERREDTRGKR 424
>AL445232-1|CAI16505.1| 1668|Homo sapiens zinc finger CCCH-type
containing 13 protein.
Length = 1668
Score = 27.9 bits (59), Expect = 9.5
Identities = 13/38 (34%), Positives = 17/38 (44%)
Frame = -3
Query: 341 PPLRAVQSREQGHQDHHRGPAPRHSEKHSASEADRAER 228
PP RE+G DH R + H +H E R +R
Sbjct: 388 PPRHRSPMREKGRHDHER-TSQSHDRRHERREDTRGKR 424
>AL157758-3|CAM13064.1| 1564|Homo sapiens zinc finger CCCH-type
containing 13 protein.
Length = 1564
Score = 27.9 bits (59), Expect = 9.5
Identities = 13/38 (34%), Positives = 17/38 (44%)
Frame = -3
Query: 341 PPLRAVQSREQGHQDHHRGPAPRHSEKHSASEADRAER 228
PP RE+G DH R + H +H E R +R
Sbjct: 388 PPRHRSPMREKGRHDHER-TSQSHDRRHERREDTRGKR 424
>AL157758-2|CAI10903.1| 1668|Homo sapiens zinc finger CCCH-type
containing 13 protein.
Length = 1668
Score = 27.9 bits (59), Expect = 9.5
Identities = 13/38 (34%), Positives = 17/38 (44%)
Frame = -3
Query: 341 PPLRAVQSREQGHQDHHRGPAPRHSEKHSASEADRAER 228
PP RE+G DH R + H +H E R +R
Sbjct: 388 PPRHRSPMREKGRHDHER-TSQSHDRRHERREDTRGKR 424
>AF151806-1|AAD34043.1| 521|Homo sapiens CGI-48 protein protein.
Length = 521
Score = 27.9 bits (59), Expect = 9.5
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = -2
Query: 312 AGTSGPPQRPGAQAQRETLGVRSRQS*AFAAGSAQ 208
AG GPPQ+P +QR+ S + A A +A+
Sbjct: 9 AGPGGPPQKPAPSSQRKPPARPSAAAAAIAVAAAE 43
>AF124251-1|AAD28246.1| 703|Homo sapiens SH2-containing protein
Nsp3 protein.
Length = 703
Score = 27.9 bits (59), Expect = 9.5
Identities = 16/44 (36%), Positives = 22/44 (50%)
Frame = +2
Query: 203 RL*ALPAANAQLCRLRTPSVSRCAWAPGLCGGPDVPAHGSAPPG 334
R+ A PAA + +P V+RC+ P LC G HG + G
Sbjct: 267 RVHAAPAAPSATALPASP-VARCSSEPQLCPGSAPKTHGESDKG 309
>AB065557-1|BAC45258.1| 542|Homo sapiens seven transmembrane helix
receptor protein.
Length = 542
Score = 27.9 bits (59), Expect = 9.5
Identities = 16/40 (40%), Positives = 20/40 (50%)
Frame = -2
Query: 330 GGAEP*AGTSGPPQRPGAQAQRETLGVRSRQS*AFAAGSA 211
G A A PP+RP A+A R ++GVR GSA
Sbjct: 211 GAAGCGAAGRAPPERPRARASRASVGVRGPSLRESPLGSA 250
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 60,249,028
Number of Sequences: 237096
Number of extensions: 1368976
Number of successful extensions: 7360
Number of sequences better than 10.0: 75
Number of HSP's better than 10.0 without gapping: 5806
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7331
length of database: 76,859,062
effective HSP length: 80
effective length of database: 57,891,382
effective search space used: 2084089752
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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