Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc12o01
(352 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U80838-2|AAL02517.1| 297|Caenorhabditis elegans Abnormal cell l... 33 0.076
U80838-1|AAU05570.1| 597|Caenorhabditis elegans Abnormal cell l... 33 0.076
AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical... 31 0.18
AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like pro... 31 0.18
AC084156-1|AAK68491.2| 466|Caenorhabditis elegans Hypothetical ... 30 0.41
Z75547-12|CAN99725.1| 141|Caenorhabditis elegans Hypothetical p... 30 0.54
AC024811-5|AAF60775.1| 285|Caenorhabditis elegans Collagen prot... 30 0.54
Z68213-3|CAA92438.1| 223|Caenorhabditis elegans Hypothetical pr... 29 0.71
AL031635-5|CAA21042.1| 1113|Caenorhabditis elegans Hypothetical ... 28 1.6
AL031632-7|CAA21009.2| 1528|Caenorhabditis elegans Hypothetical ... 27 2.9
Z81124-1|CAB03369.1| 312|Caenorhabditis elegans Hypothetical pr... 27 3.8
U53333-6|AAA96159.2| 304|Caenorhabditis elegans Collagen protei... 27 3.8
Z92815-4|CAB07294.2| 2175|Caenorhabditis elegans Hypothetical pr... 27 5.0
Z83232-4|CAB05756.2| 891|Caenorhabditis elegans Hypothetical pr... 27 5.0
U67953-4|AAL13329.1| 732|Caenorhabditis elegans Hypothetical pr... 27 5.0
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 27 5.0
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 27 5.0
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 27 5.0
AC006761-8|AAF60552.2| 524|Caenorhabditis elegans Hypothetical ... 27 5.0
Z81122-3|CAB54313.1| 1076|Caenorhabditis elegans Hypothetical pr... 26 6.6
Z81122-2|CAB03354.1| 1074|Caenorhabditis elegans Hypothetical pr... 26 6.6
U41011-8|AAA82291.2| 321|Caenorhabditis elegans Collagen protei... 26 6.6
Z81118-1|CAB03329.1| 478|Caenorhabditis elegans Hypothetical pr... 26 8.7
Z79696-1|CAB01972.1| 1584|Caenorhabditis elegans Hypothetical pr... 26 8.7
Z78065-1|CAD54154.1| 547|Caenorhabditis elegans Hypothetical pr... 26 8.7
Z75549-4|CAA99919.2| 304|Caenorhabditis elegans Hypothetical pr... 26 8.7
Z72509-5|CAA96649.1| 294|Caenorhabditis elegans Hypothetical pr... 26 8.7
Z22178-2|CAA80154.1| 261|Caenorhabditis elegans Hypothetical pr... 26 8.7
U58736-1|AAB00598.1| 302|Caenorhabditis elegans Dumpy : shorter... 26 8.7
U29377-3|AAA68720.2| 472|Caenorhabditis elegans Hypothetical pr... 26 8.7
AL110500-7|CAB54490.1| 489|Caenorhabditis elegans Hypothetical ... 26 8.7
AJ000537-1|CAA04170.1| 478|Caenorhabditis elegans GluClalpha2B ... 26 8.7
AF101316-2|AAC69230.1| 692|Caenorhabditis elegans Hypothetical ... 26 8.7
>U80838-2|AAL02517.1| 297|Caenorhabditis elegans Abnormal cell
lineage protein 42,isoform a protein.
Length = 297
Score = 32.7 bits (71), Expect = 0.076
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = -2
Query: 351 PRRSTPPGGAEP*AGTSGPPQRPGAQAQRETLGVRSRQS 235
PR +T GGA P +GT+ PP P + L +R Q+
Sbjct: 259 PRGATSTGGASPTSGTNSPPVFPKTSSSSSLLMLRDSQN 297
>U80838-1|AAU05570.1| 597|Caenorhabditis elegans Abnormal cell
lineage protein 42,isoform b protein.
Length = 597
Score = 32.7 bits (71), Expect = 0.076
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = -2
Query: 351 PRRSTPPGGAEP*AGTSGPPQRPGAQAQRETLGVRSRQS 235
PR +T GGA P +GT+ PP P + L +R Q+
Sbjct: 559 PRGATSTGGASPTSGTNSPPVFPKTSSSSSLLMLRDSQN 597
>AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical
protein Y113G7B.23 protein.
Length = 789
Score = 31.5 bits (68), Expect = 0.18
Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Frame = -3
Query: 350 PAGPPLRAVQSREQGHQDHHRGPAPRHSEKHSASEA-DRAERLLPGALRDAPSP 192
P GPP +A + Q Q + P P+ ++H A +A +A PG + P P
Sbjct: 630 PGGPPQQAYRYPPQQGQQYSPYPPPQQQQQHQAQQAQSQAHYGPPGGGQGPPPP 683
>AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like
protein protein.
Length = 789
Score = 31.5 bits (68), Expect = 0.18
Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Frame = -3
Query: 350 PAGPPLRAVQSREQGHQDHHRGPAPRHSEKHSASEA-DRAERLLPGALRDAPSP 192
P GPP +A + Q Q + P P+ ++H A +A +A PG + P P
Sbjct: 630 PGGPPQQAYRYPPQQGQQYSPYPPPQQQQQHQAQQAQSQAHYGPPGGGQGPPPP 683
>AC084156-1|AAK68491.2| 466|Caenorhabditis elegans Hypothetical
protein Y46E12BL.4 protein.
Length = 466
Score = 30.3 bits (65), Expect = 0.41
Identities = 18/47 (38%), Positives = 20/47 (42%)
Frame = -3
Query: 341 PPLRAVQSREQGHQDHHRGPAPRHSEKHSASEADRAERLLPGALRDA 201
PPLR S Q H H R P HS + R E P AL+ A
Sbjct: 308 PPLRPPPSSLQHHHHHRRSPPLFHSPVYKPKPRSRTES--PAALKAA 352
>Z75547-12|CAN99725.1| 141|Caenorhabditis elegans Hypothetical
protein K10C8.3b protein.
Length = 141
Score = 29.9 bits (64), Expect = 0.54
Identities = 14/59 (23%), Positives = 26/59 (44%)
Frame = -1
Query: 322 RAVSRDIRTTTEARRPGTARNTRRPKPTELSVCCRERSETPRHRNKPSRPVWSRRSPHH 146
R S+ ++ + +RP + R ++ P P R RS + + K + V P+H
Sbjct: 17 RKKSKSVKRCSSCKRPNSTRRSKTPDPNSEKEKVRNRSGSSSKKEKKNSLVNPNLQPNH 75
>AC024811-5|AAF60775.1| 285|Caenorhabditis elegans Collagen protein
48 protein.
Length = 285
Score = 29.9 bits (64), Expect = 0.54
Identities = 14/22 (63%), Positives = 14/22 (63%)
Frame = -2
Query: 333 PGGAEP*AGTSGPPQRPGAQAQ 268
PGG P G SGPP RPGA Q
Sbjct: 204 PGGDAP-PGPSGPPGRPGAPGQ 224
>Z68213-3|CAA92438.1| 223|Caenorhabditis elegans Hypothetical
protein C01F6.5 protein.
Length = 223
Score = 29.5 bits (63), Expect = 0.71
Identities = 11/22 (50%), Positives = 18/22 (81%)
Frame = -2
Query: 309 GTSGPPQRPGAQAQRETLGVRS 244
GT+GP +RP AQ +R++ G+R+
Sbjct: 38 GTAGPSRRPTAQPRRQSGGIRT 59
>AL031635-5|CAA21042.1| 1113|Caenorhabditis elegans Hypothetical
protein Y47D3B.7 protein.
Length = 1113
Score = 28.3 bits (60), Expect = 1.6
Identities = 16/56 (28%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
Frame = -3
Query: 305 HQDHHRGPAPRHSEKHSASEA-DRAERLLPGALRDAPSPE*TFSTCLVSTESTPFP 141
+ HH+ P P H H + + E++ ++ DAP T T LV +S P
Sbjct: 220 YSQHHQSPPPHHHHHHPMPKIHENPEQVASPSIEDAPE---TKPTHLVEPQSPKSP 272
>AL031632-7|CAA21009.2| 1528|Caenorhabditis elegans Hypothetical
protein Y32B12B.4 protein.
Length = 1528
Score = 27.5 bits (58), Expect = 2.9
Identities = 14/35 (40%), Positives = 17/35 (48%)
Frame = -3
Query: 293 HRGPAPRHSEKHSASEADRAERLLPGALRDAPSPE 189
H GP E+H +E D E LL G L D P +
Sbjct: 258 HSGPVAMKMEEHEETEEDFLE-LLNGTLDDVPDSD 291
>Z81124-1|CAB03369.1| 312|Caenorhabditis elegans Hypothetical
protein T21B4.2 protein.
Length = 312
Score = 27.1 bits (57), Expect = 3.8
Identities = 12/19 (63%), Positives = 13/19 (68%)
Frame = -2
Query: 336 PPGGAEP*AGTSGPPQRPG 280
PPG A P AG +GPP PG
Sbjct: 170 PPGPAGP-AGNAGPPGAPG 187
Score = 26.6 bits (56), Expect = 5.0
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = -2
Query: 342 STPPGGAEP*AGTSGPPQRPGAQAQ 268
+TP GGA G GPP PG Q
Sbjct: 194 NTPSGGAAGPPGPPGPPGGPGNDGQ 218
>U53333-6|AAA96159.2| 304|Caenorhabditis elegans Collagen protein
33 protein.
Length = 304
Score = 27.1 bits (57), Expect = 3.8
Identities = 13/28 (46%), Positives = 14/28 (50%)
Frame = -2
Query: 351 PRRSTPPGGAEP*AGTSGPPQRPGAQAQ 268
P PPG A P G GPP PGA +
Sbjct: 179 PGGDAPPGEAGP-KGPPGPPGSPGAPGE 205
>Z92815-4|CAB07294.2| 2175|Caenorhabditis elegans Hypothetical
protein W01F3.3 protein.
Length = 2175
Score = 26.6 bits (56), Expect = 5.0
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = -1
Query: 298 TTTEARRPGTARNTRRPKPTELSVCCRERSETP 200
TTT +RP T T P+P E +E++E P
Sbjct: 163 TTTTTKRPPTTTTTEDPQPFEFHE-LQEQAENP 194
>Z83232-4|CAB05756.2| 891|Caenorhabditis elegans Hypothetical
protein K04B12.3 protein.
Length = 891
Score = 26.6 bits (56), Expect = 5.0
Identities = 15/42 (35%), Positives = 19/42 (45%)
Frame = -1
Query: 301 RTTTEARRPGTARNTRRPKPTELSVCCRERSETPRHRNKPSR 176
R T A+RPG R R K +E V R + E KP +
Sbjct: 352 RLYTNAQRPGERRGADRFKDSEKPVKIRSKEEHLMRVEKPKK 393
>U67953-4|AAL13329.1| 732|Caenorhabditis elegans Hypothetical
protein ZC13.3 protein.
Length = 732
Score = 26.6 bits (56), Expect = 5.0
Identities = 9/16 (56%), Positives = 13/16 (81%)
Frame = -1
Query: 280 RPGTARNTRRPKPTEL 233
RP T + T++PKPTE+
Sbjct: 189 RPWTVKQTKKPKPTEV 204
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 26.6 bits (56), Expect = 5.0
Identities = 14/31 (45%), Positives = 16/31 (51%), Gaps = 3/31 (9%)
Frame = -2
Query: 351 PRRSTPP---GGAEP*AGTSGPPQRPGAQAQ 268
P S PP GG+ P AGT PP P + Q
Sbjct: 308 PTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQ 338
Score = 26.2 bits (55), Expect = 6.6
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = -2
Query: 351 PRRSTPPGGAEP*AGTSGPPQRPGA 277
P PP G+ P AG+ PP P A
Sbjct: 237 PPPPPPPKGSPPLAGSGSPPPPPAA 261
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 26.6 bits (56), Expect = 5.0
Identities = 14/31 (45%), Positives = 16/31 (51%), Gaps = 3/31 (9%)
Frame = -2
Query: 351 PRRSTPP---GGAEP*AGTSGPPQRPGAQAQ 268
P S PP GG+ P AGT PP P + Q
Sbjct: 329 PTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQ 359
Score = 26.2 bits (55), Expect = 6.6
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = -2
Query: 351 PRRSTPPGGAEP*AGTSGPPQRPGA 277
P PP G+ P AG+ PP P A
Sbjct: 258 PPPPPPPKGSPPLAGSGSPPPPPAA 282
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 26.6 bits (56), Expect = 5.0
Identities = 14/31 (45%), Positives = 16/31 (51%), Gaps = 3/31 (9%)
Frame = -2
Query: 351 PRRSTPP---GGAEP*AGTSGPPQRPGAQAQ 268
P S PP GG+ P AGT PP P + Q
Sbjct: 314 PTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQ 344
Score = 26.2 bits (55), Expect = 6.6
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = -2
Query: 351 PRRSTPPGGAEP*AGTSGPPQRPGA 277
P PP G+ P AG+ PP P A
Sbjct: 243 PPPPPPPKGSPPLAGSGSPPPPPAA 267
>AC006761-8|AAF60552.2| 524|Caenorhabditis elegans Hypothetical
protein Y41G9A.6 protein.
Length = 524
Score = 26.6 bits (56), Expect = 5.0
Identities = 18/52 (34%), Positives = 27/52 (51%)
Frame = -1
Query: 298 TTTEARRPGTARNTRRPKPTELSVCCRERSETPRHRNKPSRPVWSRRSPHHF 143
T+TE P + RP T+L+V ++TP H N+P P ++ SP F
Sbjct: 263 TSTETSSPFFLDQSVRP--TQLAVASSFPAQTPLH-NEPLPPPVTQNSPSIF 311
>Z81122-3|CAB54313.1| 1076|Caenorhabditis elegans Hypothetical
protein T13F2.3b protein.
Length = 1076
Score = 26.2 bits (55), Expect = 6.6
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = -2
Query: 339 TPPGGAEP*AGTSGPPQRP 283
T PG A P G G PQRP
Sbjct: 293 TTPGSAGPGTGPPGTPQRP 311
>Z81122-2|CAB03354.1| 1074|Caenorhabditis elegans Hypothetical
protein T13F2.3a protein.
Length = 1074
Score = 26.2 bits (55), Expect = 6.6
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = -2
Query: 339 TPPGGAEP*AGTSGPPQRP 283
T PG A P G G PQRP
Sbjct: 291 TTPGSAGPGTGPPGTPQRP 309
>U41011-8|AAA82291.2| 321|Caenorhabditis elegans Collagen protein
114 protein.
Length = 321
Score = 26.2 bits (55), Expect = 6.6
Identities = 14/29 (48%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
Frame = -2
Query: 351 PRRSTPPG-GAEP*AGTSGPPQRPGAQAQ 268
P R+ P G EP G GPP +PGA Q
Sbjct: 192 PGRNGPDGPNGEP--GPKGPPGQPGADGQ 218
>Z81118-1|CAB03329.1| 478|Caenorhabditis elegans Hypothetical
protein R11G10.1b protein.
Length = 478
Score = 25.8 bits (54), Expect = 8.7
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = -3
Query: 305 HQDHHRGPAPRHSEKHSASEADRAE 231
H H R + HS KH+AS +D E
Sbjct: 19 HAYHSRPKSEEHSPKHAASSSDLFE 43
>Z79696-1|CAB01972.1| 1584|Caenorhabditis elegans Hypothetical
protein F54F3.1 protein.
Length = 1584
Score = 25.8 bits (54), Expect = 8.7
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = -3
Query: 329 AVQSREQGHQDHHRGPAPRHSEKHS 255
A Q++EQ HQ HH+ P+ + S
Sbjct: 326 ARQAQEQHHQQHHQPDQPQQQPQRS 350
>Z78065-1|CAD54154.1| 547|Caenorhabditis elegans Hypothetical
protein T09E8.1d protein.
Length = 547
Score = 25.8 bits (54), Expect = 8.7
Identities = 12/27 (44%), Positives = 13/27 (48%), Gaps = 1/27 (3%)
Frame = -3
Query: 323 QSREQGHQDHHRGPAPRH-SEKHSASE 246
Q+ H HH PAPRH S H E
Sbjct: 31 QNGNSHHHHHHLPPAPRHLSSSHHQIE 57
>Z75549-4|CAA99919.2| 304|Caenorhabditis elegans Hypothetical
protein T19C4.4 protein.
Length = 304
Score = 25.8 bits (54), Expect = 8.7
Identities = 16/50 (32%), Positives = 25/50 (50%)
Frame = +1
Query: 70 LRLSKMTMLIQQLNCSSSISKYYNGNGVDSVETKQVEKVYSGDGASLSAP 219
+R++ +T L+Q + S+ +YYN N +V S DG SL P
Sbjct: 218 IRIAFITCLVQACGTALSVIRYYNMNTSMAVTLANFIPFIS-DGLSLVQP 266
>Z72509-5|CAA96649.1| 294|Caenorhabditis elegans Hypothetical
protein F32G8.5 protein.
Length = 294
Score = 25.8 bits (54), Expect = 8.7
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = +2
Query: 227 NAQLCRLRTPSVSRCAWAPGLCGGPDVPAHGSAPPGGVDRR 349
NAQ+ TPS ++C P GPD G + P G++ R
Sbjct: 125 NAQIDTYATPSCTQCTPGPPGAPGPD----GVSGPVGINGR 161
>Z22178-2|CAA80154.1| 261|Caenorhabditis elegans Hypothetical
protein F54C8.2 protein.
Length = 261
Score = 25.8 bits (54), Expect = 8.7
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = +1
Query: 163 ETKQVEKVYSGDGASLSAPGSKRSALSASDAECF-SLCL 276
E + V DG+SL + SKR+ L+ +D + + LCL
Sbjct: 220 EASEALLVQMFDGSSLISAHSKRATLTTTDVQLYRRLCL 258
>U58736-1|AAB00598.1| 302|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 3 protein.
Length = 302
Score = 25.8 bits (54), Expect = 8.7
Identities = 14/33 (42%), Positives = 15/33 (45%)
Frame = -2
Query: 351 PRRSTPPGGAEP*AGTSGPPQRPGAQAQRETLG 253
P + PPG P AG GP PG Q T G
Sbjct: 152 PCQKCPPGPPGP-AGPPGPKGLPGPQGDAGTSG 183
>U29377-3|AAA68720.2| 472|Caenorhabditis elegans Hypothetical
protein K05F1.5 protein.
Length = 472
Score = 25.8 bits (54), Expect = 8.7
Identities = 12/32 (37%), Positives = 15/32 (46%)
Frame = -1
Query: 226 CCRERSETPRHRNKPSRPVWSRRSPHHFHCSI 131
CC S P+ + SRP + HFHC I
Sbjct: 97 CCPITS-LPKRLDSCSRPFCKLKKKAHFHCKI 127
>AL110500-7|CAB54490.1| 489|Caenorhabditis elegans Hypothetical
protein Y87G2A.7 protein.
Length = 489
Score = 25.8 bits (54), Expect = 8.7
Identities = 14/51 (27%), Positives = 25/51 (49%)
Frame = +1
Query: 70 LRLSKMTMLIQQLNCSSSISKYYNGNGVDSVETKQVEKVYSGDGASLSAPG 222
++LS+ L QQ+ S+ + Y ++ V KQ+ ++ GA PG
Sbjct: 419 IKLSEQLYLDQQIKLICSLCQLYPVKMINKVAIKQLLELVVFAGADFEMPG 469
>AJ000537-1|CAA04170.1| 478|Caenorhabditis elegans GluClalpha2B
protein protein.
Length = 478
Score = 25.8 bits (54), Expect = 8.7
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = -3
Query: 305 HQDHHRGPAPRHSEKHSASEADRAE 231
H H R + HS KH+AS +D E
Sbjct: 19 HAYHSRPKSEEHSPKHAASSSDLFE 43
>AF101316-2|AAC69230.1| 692|Caenorhabditis elegans Hypothetical
protein F52F10.4 protein.
Length = 692
Score = 25.8 bits (54), Expect = 8.7
Identities = 9/15 (60%), Positives = 13/15 (86%)
Frame = -1
Query: 106 IVVLTSSSWRDVIKP 62
I+ TS++W+DVIKP
Sbjct: 15 IIPTTSATWKDVIKP 29
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,788,672
Number of Sequences: 27780
Number of extensions: 183812
Number of successful extensions: 1158
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 841
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1149
length of database: 12,740,198
effective HSP length: 72
effective length of database: 10,740,038
effective search space used: 472561672
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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