Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc12n19
         (138 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X74801-1|CAA52808.1|  544|Homo sapiens gamma subunit of CCT chap...    41   6e-04
BC008019-1|AAH08019.1|  544|Homo sapiens chaperonin containing T...    41   6e-04
BC006501-1|AAH06501.3|  545|Homo sapiens chaperonin containing T...    41   6e-04
AY524046-1|AAS94255.1|  545|Homo sapiens PIG48 protein.                41   6e-04
AL589685-14|CAI14172.1|  276|Homo sapiens chaperonin containing ...    41   6e-04
AL589685-10|CAI14167.1|  545|Homo sapiens chaperonin containing ...    41   6e-04
AL589685-9|CAI14168.1|  522|Homo sapiens chaperonin containing T...    41   6e-04
AB208882-1|BAD92119.1|  577|Homo sapiens chaperonin containing T...    41   6e-04
AY457063-1|AAR19397.1| 2098|Homo sapiens FYVE domain-containing ...    36   0.018
AK127769-1|BAC87123.1| 1016|Homo sapiens protein ( Homo sapiens ...    36   0.018

>X74801-1|CAA52808.1|  544|Homo sapiens gamma subunit of CCT
           chaperonin protein.
          Length = 544

 Score = 41.1 bits (92), Expect = 6e-04
 Identities = 15/28 (53%), Positives = 22/28 (78%)
 Frame = +1

Query: 55  DIDVRNYVQVKKVPGGTIXDSCVXHGVV 138
           +ID++ Y +V+K+PGG I DSCV  GV+
Sbjct: 191 EIDIKKYARVEKIPGGIIEDSCVLRGVM 218


>BC008019-1|AAH08019.1|  544|Homo sapiens chaperonin containing
           TCP1, subunit 3 (gamma) protein.
          Length = 544

 Score = 41.1 bits (92), Expect = 6e-04
 Identities = 15/28 (53%), Positives = 22/28 (78%)
 Frame = +1

Query: 55  DIDVRNYVQVKKVPGGTIXDSCVXHGVV 138
           +ID++ Y +V+K+PGG I DSCV  GV+
Sbjct: 191 EIDIKKYARVEKIPGGIIEDSCVLRGVM 218


>BC006501-1|AAH06501.3|  545|Homo sapiens chaperonin containing
           TCP1, subunit 3 (gamma) protein.
          Length = 545

 Score = 41.1 bits (92), Expect = 6e-04
 Identities = 15/28 (53%), Positives = 22/28 (78%)
 Frame = +1

Query: 55  DIDVRNYVQVKKVPGGTIXDSCVXHGVV 138
           +ID++ Y +V+K+PGG I DSCV  GV+
Sbjct: 192 EIDIKKYARVEKIPGGIIEDSCVLRGVM 219


>AY524046-1|AAS94255.1|  545|Homo sapiens PIG48 protein.
          Length = 545

 Score = 41.1 bits (92), Expect = 6e-04
 Identities = 15/28 (53%), Positives = 22/28 (78%)
 Frame = +1

Query: 55  DIDVRNYVQVKKVPGGTIXDSCVXHGVV 138
           +ID++ Y +V+K+PGG I DSCV  GV+
Sbjct: 192 EIDIKKYARVEKIPGGIIEDSCVLRGVM 219


>AL589685-14|CAI14172.1|  276|Homo sapiens chaperonin containing
           TCP1, subunit 3 (gamma) protein.
          Length = 276

 Score = 41.1 bits (92), Expect = 6e-04
 Identities = 15/28 (53%), Positives = 22/28 (78%)
 Frame = +1

Query: 55  DIDVRNYVQVKKVPGGTIXDSCVXHGVV 138
           +ID++ Y +V+K+PGG I DSCV  GV+
Sbjct: 216 EIDIKKYARVEKIPGGIIEDSCVLRGVM 243


>AL589685-10|CAI14167.1|  545|Homo sapiens chaperonin containing
           TCP1, subunit 3 (gamma) protein.
          Length = 545

 Score = 41.1 bits (92), Expect = 6e-04
 Identities = 15/28 (53%), Positives = 22/28 (78%)
 Frame = +1

Query: 55  DIDVRNYVQVKKVPGGTIXDSCVXHGVV 138
           +ID++ Y +V+K+PGG I DSCV  GV+
Sbjct: 192 EIDIKKYARVEKIPGGIIEDSCVLRGVM 219


>AL589685-9|CAI14168.1|  522|Homo sapiens chaperonin containing
           TCP1, subunit 3 (gamma) protein.
          Length = 522

 Score = 41.1 bits (92), Expect = 6e-04
 Identities = 15/28 (53%), Positives = 22/28 (78%)
 Frame = +1

Query: 55  DIDVRNYVQVKKVPGGTIXDSCVXHGVV 138
           +ID++ Y +V+K+PGG I DSCV  GV+
Sbjct: 169 EIDIKKYARVEKIPGGIIEDSCVLRGVM 196


>AB208882-1|BAD92119.1|  577|Homo sapiens chaperonin containing
           TCP1, subunit 3 (gamma) variant protein.
          Length = 577

 Score = 41.1 bits (92), Expect = 6e-04
 Identities = 15/28 (53%), Positives = 22/28 (78%)
 Frame = +1

Query: 55  DIDVRNYVQVKKVPGGTIXDSCVXHGVV 138
           +ID++ Y +V+K+PGG I DSCV  GV+
Sbjct: 224 EIDIKKYARVEKIPGGIIEDSCVLRGVM 251


>AY457063-1|AAR19397.1| 2098|Homo sapiens FYVE domain-containing
           phosphoinositide kinase protein.
          Length = 2098

 Score = 36.3 bits (80), Expect = 0.018
 Identities = 14/28 (50%), Positives = 20/28 (71%)
 Frame = +1

Query: 55  DIDVRNYVQVKKVPGGTIXDSCVXHGVV 138
           D+D+R +V +KK+PGG   DS V +G V
Sbjct: 658 DMDIRQFVHIKKIPGGKKFDSVVVNGFV 685


>AK127769-1|BAC87123.1| 1016|Homo sapiens protein ( Homo sapiens
           cDNA FLJ45870 fis, clone OCBBF3005330, highly  similar
           to FYVE finger-containing phosphoinositide kinase (EC
           2.7.1.68). ).
          Length = 1016

 Score = 36.3 bits (80), Expect = 0.018
 Identities = 14/28 (50%), Positives = 20/28 (71%)
 Frame = +1

Query: 55  DIDVRNYVQVKKVPGGTIXDSCVXHGVV 138
           D+D+R +V +KK+PGG   DS V +G V
Sbjct: 234 DMDIRQFVHIKKIPGGKKFDSVVVNGFV 261


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,011,902
Number of Sequences: 237096
Number of extensions: 233032
Number of successful extensions: 374
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 371
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 374
length of database: 76,859,062
effective HSP length: 26
effective length of database: 70,694,566
effective search space used: 1343196754
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)