Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc12n19
         (138 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X95602-1|CAA64860.1|  545|Drosophila melanogaster CCT-gamma prot...    39   8e-04
U31961-17|AAA84416.1|  531|Drosophila melanogaster protein ( Dro...    39   8e-04
AY089543-1|AAL90281.1|  544|Drosophila melanogaster LD20933p pro...    39   8e-04
AE014297-2252|AAN13716.1|  544|Drosophila melanogaster CG8977-PB...    39   8e-04
AE014297-2251|AAF55350.1|  544|Drosophila melanogaster CG8977-PA...    39   8e-04
AL035311-2|CAA22949.1| 1854|Drosophila melanogaster EG:52C10.5 p...    39   0.001
AE013599-2562|AAS64818.1| 1809|Drosophila melanogaster CG6355-PB...    39   0.001
AE013599-2561|AAF57789.1| 1809|Drosophila melanogaster CG6355-PA...    39   0.001

>X95602-1|CAA64860.1|  545|Drosophila melanogaster CCT-gamma protein
           protein.
          Length = 545

 Score = 39.1 bits (87), Expect = 8e-04
 Identities = 13/28 (46%), Positives = 22/28 (78%)
 Frame = +1

Query: 55  DIDVRNYVQVKKVPGGTIXDSCVXHGVV 138
           ++D++ Y +V+K+PGG I +SCV  GV+
Sbjct: 195 EVDIKRYAKVEKIPGGAIEESCVLKGVM 222


>U31961-17|AAA84416.1|  531|Drosophila melanogaster protein (
           Drosophila melanogasterbithorax complex (BX-C), complete
           sequence. ).
          Length = 531

 Score = 39.1 bits (87), Expect = 8e-04
 Identities = 13/28 (46%), Positives = 22/28 (78%)
 Frame = +1

Query: 55  DIDVRNYVQVKKVPGGTIXDSCVXHGVV 138
           ++D++ Y +V+K+PGG I +SCV  GV+
Sbjct: 181 EVDIKRYAKVEKIPGGAIEESCVLKGVM 208


>AY089543-1|AAL90281.1|  544|Drosophila melanogaster LD20933p
           protein.
          Length = 544

 Score = 39.1 bits (87), Expect = 8e-04
 Identities = 13/28 (46%), Positives = 22/28 (78%)
 Frame = +1

Query: 55  DIDVRNYVQVKKVPGGTIXDSCVXHGVV 138
           ++D++ Y +V+K+PGG I +SCV  GV+
Sbjct: 194 EVDIKRYAKVEKIPGGAIEESCVLKGVM 221


>AE014297-2252|AAN13716.1|  544|Drosophila melanogaster CG8977-PB,
           isoform B protein.
          Length = 544

 Score = 39.1 bits (87), Expect = 8e-04
 Identities = 13/28 (46%), Positives = 22/28 (78%)
 Frame = +1

Query: 55  DIDVRNYVQVKKVPGGTIXDSCVXHGVV 138
           ++D++ Y +V+K+PGG I +SCV  GV+
Sbjct: 194 EVDIKRYAKVEKIPGGAIEESCVLKGVM 221


>AE014297-2251|AAF55350.1|  544|Drosophila melanogaster CG8977-PA,
           isoform A protein.
          Length = 544

 Score = 39.1 bits (87), Expect = 8e-04
 Identities = 13/28 (46%), Positives = 22/28 (78%)
 Frame = +1

Query: 55  DIDVRNYVQVKKVPGGTIXDSCVXHGVV 138
           ++D++ Y +V+K+PGG I +SCV  GV+
Sbjct: 194 EVDIKRYAKVEKIPGGAIEESCVLKGVM 221


>AL035311-2|CAA22949.1| 1854|Drosophila melanogaster EG:52C10.5
           protein.
          Length = 1854

 Score = 38.7 bits (86), Expect = 0.001
 Identities = 16/26 (61%), Positives = 19/26 (73%)
 Frame = +1

Query: 58  IDVRNYVQVKKVPGGTIXDSCVXHGV 135
           +D+RNYV  KKVPGG   DS + HGV
Sbjct: 545 MDIRNYVNFKKVPGGRRKDSKIVHGV 570


>AE013599-2562|AAS64818.1| 1809|Drosophila melanogaster CG6355-PB,
           isoform B protein.
          Length = 1809

 Score = 38.7 bits (86), Expect = 0.001
 Identities = 16/26 (61%), Positives = 19/26 (73%)
 Frame = +1

Query: 58  IDVRNYVQVKKVPGGTIXDSCVXHGV 135
           +D+RNYV  KKVPGG   DS + HGV
Sbjct: 505 MDIRNYVNFKKVPGGRRKDSKIVHGV 530


>AE013599-2561|AAF57789.1| 1809|Drosophila melanogaster CG6355-PA,
           isoform A protein.
          Length = 1809

 Score = 38.7 bits (86), Expect = 0.001
 Identities = 16/26 (61%), Positives = 19/26 (73%)
 Frame = +1

Query: 58  IDVRNYVQVKKVPGGTIXDSCVXHGV 135
           +D+RNYV  KKVPGG   DS + HGV
Sbjct: 505 MDIRNYVNFKKVPGGRRKDSKIVHGV 530


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,728,530
Number of Sequences: 53049
Number of extensions: 66150
Number of successful extensions: 151
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 143
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 151
length of database: 24,988,368
effective HSP length: 26
effective length of database: 23,609,094
effective search space used: 448572786
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)