Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc12n17
(697 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC25H2.12c |cct7||chaperonin-containing T-complex eta subunit ... 274 8e-75
SPBC106.06 |cct4||chaperonin-containing T-complex delta subunit ... 166 2e-42
SPAC1D4.04 |cct2||chaperonin-containing T-complex beta subunit C... 156 3e-39
SPAC1420.02c |cct5||chaperonin-containing T-complex epsilon subu... 147 1e-36
SPBC12D12.03 |cct1||chaperonin-containing T-complex alpha subuni... 147 1e-36
SPBC1A4.08c |cct3||chaperonin-containing T-complex gamma subunit... 143 2e-35
SPBC337.05c |cct8||chaperonin-containing T-complex theta subunit... 114 1e-26
SPBC646.11 |cct6||chaperonin-containing T-complex zeta subunit C... 111 1e-25
SPAC12G12.04 |hsp60|hsp60|mitochondrial heat shock protein Hsp60... 52 1e-07
SPBC3E7.01 |fab1|ste12, SPBC6B1.11c|1-phosphatidylinositol-3-pho... 32 0.090
SPAC328.06 |ubp2||ubiquitin C-terminal hydrolase Ubp2|Schizosacc... 28 1.1
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 28 1.1
SPBC216.07c |tor2|SPBC646.01c|phosphatidylinositol kinase Tor2|S... 27 3.4
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 27 3.4
SPAC1250.01 |snf21|SPAC29A4.21|ATP-dependent DNA helicase Snf21|... 26 4.5
SPCC1620.14c |snf22|SPCC830.01c|ATP-dependent DNA helicase Snf22... 26 5.9
SPBC582.07c |rpn7||19S proteasome regulatory subunit Rpn7|Schizo... 25 7.8
SPAC30C2.07 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 25 7.8
SPBC1604.18c |||vacuolar sorting protein |Schizosaccharomyces po... 25 7.8
SPBC1683.01 |||inorganic phosphate transporter |Schizosaccharomy... 25 7.8
>SPBC25H2.12c |cct7||chaperonin-containing T-complex eta subunit
Cct7|Schizosaccharomyces pombe|chr 2|||Manual
Length = 558
Score = 274 bits (672), Expect = 8e-75
Identities = 136/213 (63%), Positives = 167/213 (78%)
Frame = +2
Query: 59 QPQILLLREGTDQTQGKPQLVSNINACQLVVDAVRTTLGPRGMDKLIVDHNGKAVISNDG 238
Q +++L+EGTD +QG+ QL+SNINAC V D +RTTLGP G DKL+VD G+ VISNDG
Sbjct: 7 QIPVIVLKEGTDDSQGRGQLLSNINACVAVQDTIRTTLGPLGADKLMVDDRGEVVISNDG 66
Query: 239 ATIMKLLDIVHPAAKTLVDIAKSQDAEVGDGTTSVVILAGEILKRLKPFVEEGVHPRVLI 418
ATIMKLLDIVHPAAKTLVDIA++QDAEVGDGTTSVV+ AGE+L+ + FVE+GV ++I
Sbjct: 67 ATIMKLLDIVHPAAKTLVDIARAQDAEVGDGTTSVVVFAGELLREARTFVEDGVSSHLII 126
Query: 419 RAVRTASRLAIEKIKEQAVKIDNKSPEEQRDLLLKCASTAMSSKLIHQQKDHFSKIVVDA 598
R R A++LA+ KIKE A+ +D + RDLL KCASTAM+SKLI F+K+VVDA
Sbjct: 127 RGYRKAAQLAVNKIKEIAIHLDLSDEGKLRDLLTKCASTAMNSKLIRSNSTFFTKMVVDA 186
Query: 599 VLSLDTPLLPLDMIGIKKVPGGALEDSFLVPGV 697
VL+LD L +MIGIKKVPGGA+EDS LV GV
Sbjct: 187 VLTLDQEDLNENMIGIKKVPGGAMEDSLLVKGV 219
>SPBC106.06 |cct4||chaperonin-containing T-complex delta subunit
Cct4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 527
Score = 166 bits (404), Expect = 2e-42
Identities = 88/207 (42%), Positives = 138/207 (66%), Gaps = 6/207 (2%)
Frame = +2
Query: 95 QTQGKPQLV--SNINACQLVVDAVRTTLGPRGMDKLIVDHNGKAVISNDGATIMKLLDIV 268
Q + KPQ V SNI A + V DA+RT+LGP+GMDK+I G+ +++NDGATI+K L ++
Sbjct: 12 QDREKPQEVRLSNIMAARSVADAIRTSLGPKGMDKMIQTGKGEVILTNDGATILKHLSVL 71
Query: 269 HPAAKTLVDIAKSQDAEVGDGTTSVVILAGEILKRLKPFVEEGVHPRVLIRAVRTASRLA 448
HPAAK LVD++ +QD E GDGTTSVVILAG +L + +++G+HP V+ + + A+
Sbjct: 72 HPAAKMLVDLSAAQDVEAGDGTTSVVILAGSMLACAEKLLKKGIHPTVIAESFQRAAGFT 131
Query: 449 IEKIKEQAVKIDNKSPEEQRDLLLKCASTAMSSKLIHQQKDHFSKIVVDAVLSLDTPLLP 628
++ +KE A+ I+ R+ LL+ A+T+++SK++ Q + + I VDAVL + P +
Sbjct: 132 VDCMKENALAIE----LSDRESLLRAATTSLNSKIVSQYSNLLAPIAVDAVLKVIDPRVA 187
Query: 629 LDM----IGIKKVPGGALEDSFLVPGV 697
++ I I K GG ++D+ L+PG+
Sbjct: 188 TNVDLKDIRIVKKLGGIIDDTELIPGL 214
>SPAC1D4.04 |cct2||chaperonin-containing T-complex beta subunit
Cct2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 527
Score = 156 bits (378), Expect = 3e-39
Identities = 90/209 (43%), Positives = 133/209 (63%), Gaps = 2/209 (0%)
Frame = +2
Query: 74 LLREGTDQTQGKPQLVSNINACQLVVDAVRTTLGPRGMDKLIVDHN-GKAVISNDGATIM 250
+ E Q +G+ +S+ V D V++TLGP+GMDK++ ++ G V++NDGATI+
Sbjct: 8 IFNESGIQERGENARLSSFVGAIAVGDLVKSTLGPKGMDKILQSNSSGDIVVTNDGATIL 67
Query: 251 KLLDIVHPAAKTLVDIAKSQDAEVGDGTTSVVILAGEILKRLKPFVEEGVHPRVLIRAVR 430
K + + + AAK LV+I+K QD EVGDGTTSV + A E+L++ + V +HP+V+I R
Sbjct: 68 KSIALDNAAAKVLVNISKVQDDEVGDGTTSVCVFAAELLRQAEIMVNAKIHPQVIIDGYR 127
Query: 431 TASRLAIEKIKEQAVKIDNKS-PEEQRDLLLKCASTAMSSKLIHQQKDHFSKIVVDAVLS 607
A++ AI+ ++ A IDN S P + R L A T +SSK++ Q K+HF+++ VDAVL
Sbjct: 128 IATKTAIDALR--ASSIDNSSDPAKFRSDLENIARTTLSSKILSQNKNHFAQLAVDAVLR 185
Query: 608 LDTPLLPLDMIGIKKVPGGALEDSFLVPG 694
L LD I I K+ GG L+DSFL G
Sbjct: 186 LKGS-TNLDNIQIIKILGGKLDDSFLDEG 213
>SPAC1420.02c |cct5||chaperonin-containing T-complex epsilon subunit
Cct5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 546
Score = 147 bits (357), Expect = 1e-36
Identities = 77/209 (36%), Positives = 132/209 (63%), Gaps = 3/209 (1%)
Frame = +2
Query: 80 REGTDQTQGKPQLVSNINACQLVVDAVRTTLGPRGMDKLIVDHNGKAVISNDGATIMKLL 259
+E + G + S+I A + V + VRT+LGPRG+DK+++ +G+ ++NDGATI+ +
Sbjct: 24 QEKKRRLHGIDAVKSHILATKTVANIVRTSLGPRGLDKILISPDGEITVTNDGATILDQM 83
Query: 260 DIVHPAAKTLVDIAKSQDAEVGDGTTSVVILAGEILKRLKPFVEEGVHPRVLIRAVRTAS 439
++ H AK LV ++KSQD E+GDGTT VV+LAG +L++ + +++G+HP + A
Sbjct: 84 EVEHQIAKLLVQLSKSQDDEIGDGTTGVVVLAGALLEQAEALIDKGIHPIRIADGYEKAC 143
Query: 440 RLAIEKIKEQAVKIDNKSPEEQRDLLLKCASTAMSSKLIHQQKDHFSKIVVDAVLS---L 610
++A++ + + +D SPE + L + A T++ SK++ + DHF+ I VDAVLS L
Sbjct: 144 QVAVKHLDAISDVVD-FSPENTTN-LFRSAKTSLGSKVVSKAHDHFANIAVDAVLSVADL 201
Query: 611 DTPLLPLDMIGIKKVPGGALEDSFLVPGV 697
+ ++I + GG+++D+ LV GV
Sbjct: 202 QRKDVDFELIKVDGKVGGSVDDTKLVKGV 230
>SPBC12D12.03 |cct1||chaperonin-containing T-complex alpha subunit
Cct1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 556
Score = 147 bits (357), Expect = 1e-36
Identities = 81/208 (38%), Positives = 123/208 (59%), Gaps = 7/208 (3%)
Frame = +2
Query: 92 DQTQGKPQLVSNINACQLVVDAVRTTLGPRGMDKLIVDHNGKAVISNDGATIMKLLDIVH 271
++ G+ N+ A + + V+++LGP G+DK++VD G ++NDGATI+ LLD+ H
Sbjct: 15 EKISGEDVRNQNVLATTAIANVVKSSLGPVGLDKMLVDDIGDVTVTNDGATILSLLDVEH 74
Query: 272 PAAKTLVDIAKSQDAEVGDGTTSVVILAGEILKRLKPFVEEGVHPRVLIRAVRTASRLAI 451
PA K LV++A+ QD EVGDGTTSVVI+A E+L+R V+ +HP +I R A R A+
Sbjct: 75 PAGKVLVELAQQQDKEVGDGTTSVVIIAAELLRRANELVKNKIHPTTIITGYRLAIREAV 134
Query: 452 EKIKE-QAVKIDNKSPEEQRDLLLKCASTAMSSKLIHQQKDHFSKIVVDAVLSLDT---- 616
+ + + + +D+ E L+ A T+MSSK+I D FS + VDA+LS+ T
Sbjct: 135 KFMTDVLSCSVDSLGKES----LINVAKTSMSSKIIGNDSDFFSTMAVDAMLSVKTSNSK 190
Query: 617 --PLLPLDMIGIKKVPGGALEDSFLVPG 694
P+ + I K G + +S LV G
Sbjct: 191 GETRYPVKAVNILKAHGKSSRESVLVKG 218
>SPBC1A4.08c |cct3||chaperonin-containing T-complex gamma subunit
Cct3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 528
Score = 143 bits (347), Expect = 2e-35
Identities = 78/220 (35%), Positives = 127/220 (57%), Gaps = 6/220 (2%)
Frame = +2
Query: 56 MQPQILLLREGTDQTQGKPQLVSNINACQLVVDAVRTTLGPRGMDKLIVDHNGKAVISND 235
MQ + ++ ++ G +SNI A + V D +RT LGPR M K+++D G +++ND
Sbjct: 1 MQSPVFVMNTNGNRQVGHKAQMSNIQAAKAVADVIRTCLGPRAMLKMLLDPVGSVLLTND 60
Query: 236 GATIMKLLDIVHPAAKTLVDIAKSQDAEVGDGTTSVVILAGEILKRLKPFVEEGVHPRVL 415
G I++ +++ HPAAK+++++A++QD EVGDGTTSV+ILAGEIL P ++ +HP V+
Sbjct: 61 GHAILREIEVAHPAAKSMIELARTQDEEVGDGTTSVIILAGEILAAASPLLDRKIHPVVM 120
Query: 416 IRAVRTASRLAIEKIKEQAVKIDNKSPEEQRDLLLKCASTAMSSKLIHQQKD---HFSKI 586
IR+ + A A+ I E + ++ E L+ C T KL+ + D H +
Sbjct: 121 IRSFKQALEDALSIIDEITLPVNVDDNAEMFRLIRTCIGT----KLVARWSDLMCHLALR 176
Query: 587 VVDAVLSLDTPLLPLDM---IGIKKVPGGALEDSFLVPGV 697
V V S + +D+ ++KVPGG +E S ++ GV
Sbjct: 177 AVRTVASTSNGRMEIDIKRYARVEKVPGGEIESSCVLDGV 216
>SPBC337.05c |cct8||chaperonin-containing T-complex theta subunit
Cct8 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 546
Score = 114 bits (275), Expect = 1e-26
Identities = 69/213 (32%), Positives = 121/213 (56%), Gaps = 5/213 (2%)
Frame = +2
Query: 74 LLREGTDQTQG-KPQLVSNINACQLVVDAVRTTLGPRGMDKLIVDHNGKAVISNDGATIM 250
L REG QG + ++ N NA + + + RT+LGP G +K++V+H + ++ND ATI+
Sbjct: 13 LFREGYRIMQGVEDAVIRNCNAIRELSEITRTSLGPNGKNKIVVNHLQQTFLTNDAATII 72
Query: 251 KLLDIVHPAAKTLVDIAKSQDAEVGDGTTSVVILAGEILKRLKPFVEEGVHPRVLIRAVR 430
+ L+++HPAAK +VD + Q+ E+GD VV+ GE+L + + + G+ P + +
Sbjct: 73 RELEVIHPAAKLVVDATQQQENELGDAANFVVVFTGELLAKAENMIRMGLTPLEIAKGYE 132
Query: 431 TASRLAIEKIKE-QAVKIDNKSPEEQRDLLLKCASTAMSSKLIHQQKDHFSKIVVDAVLS 607
A +E ++E A KI+ E++ L+K T +SSK + +D S +V A+L+
Sbjct: 133 MALSHTMEVLEEICADKIETVESEKE---LIKAIRTCISSKQ-YGNEDFLSDLVAKAILT 188
Query: 608 L---DTPLLPLDMIGIKKVPGGALEDSFLVPGV 697
+ D +D I + K+ G +L +S +V G+
Sbjct: 189 VLPKDPSKFNVDNIRVVKIMGSSLYNSQVVKGM 221
>SPBC646.11 |cct6||chaperonin-containing T-complex zeta subunit
Cct6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 535
Score = 111 bits (266), Expect = 1e-25
Identities = 66/210 (31%), Positives = 113/210 (53%), Gaps = 2/210 (0%)
Frame = +2
Query: 74 LLREGTDQTQGKPQLVSNINACQLVVDAVRTTLGPRGMDKLIVDHNGKAVISNDGATIMK 253
LL + Q L NI+A + D +++ LGP G K++VD G ++ DG ++
Sbjct: 4 LLNPKAESIQRAQALQVNISAAIGLQDVLKSNLGPTGTTKMLVDGAGAIKLTKDGKVLLT 63
Query: 254 LLDIVHPAAKTLVDIAKSQDAEVGDGTTSVVILAGEILKRLKPFVEEGVHPRVLIRAVRT 433
+ I +P A + A +QD GDGTTSV +L GE+LK+ + ++ EG+HP ++
Sbjct: 64 EMQIQNPTASCIAKAATAQDDATGDGTTSVCLLVGELLKQAELYIREGLHPSLISDGFNL 123
Query: 434 ASRLAIEKIKEQAVKIDNKSPEEQRDLLLKCASTAMSSKLIHQQKDHFSKIVVDAVLSLD 613
A A+ + + K D E R++LL A T++S+K+ + + + VVDA+L++
Sbjct: 124 AKNEALTFL--DSFKTDF---EVDREVLLNVAKTSLSTKISSKVVESLAPAVVDAILTIR 178
Query: 614 TPLLPLD--MIGIKKVPGGALEDSFLVPGV 697
P P+D M+ I K+ + D+ L+ G+
Sbjct: 179 RPDEPIDLHMVEIMKMQNRSASDTQLIRGL 208
>SPAC12G12.04 |hsp60|hsp60|mitochondrial heat shock protein
Hsp60|Schizosaccharomyces pombe|chr 1|||Manual
Length = 582
Score = 51.6 bits (118), Expect = 1e-07
Identities = 37/120 (30%), Positives = 56/120 (46%), Gaps = 4/120 (3%)
Frame = +2
Query: 155 AVRTTLGPRGMDKLIVDHNGKAVISNDGATIMKLLDIVHP----AAKTLVDIAKSQDAEV 322
AV TLGP+G + LI G I+ DG T+ + + + A+ + D+A +
Sbjct: 57 AVSVTLGPKGRNVLIDQPFGSPKITKDGVTVARSVSLKDKFENLGARLVQDVASKTNEVA 116
Query: 323 GDGTTSVVILAGEILKRLKPFVEEGVHPRVLIRAVRTASRLAIEKIKEQAVKIDNKSPEE 502
GDGTT+ +L I V G +P L R ++ A +E + QA K D + EE
Sbjct: 117 GDGTTTATVLTRAIFSETVRNVAAGCNPMDLRRGIQLAVDNVVEFL--QANKRDITTSEE 174
>SPBC3E7.01 |fab1|ste12,
SPBC6B1.11c|1-phosphatidylinositol-3-phosphate 5-kinase
Fab1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 1932
Score = 31.9 bits (69), Expect = 0.090
Identities = 12/20 (60%), Positives = 17/20 (85%)
Frame = +2
Query: 638 IGIKKVPGGALEDSFLVPGV 697
+ IKK+PGG+++D FLV GV
Sbjct: 525 VKIKKIPGGSIQDCFLVNGV 544
>SPAC328.06 |ubp2||ubiquitin C-terminal hydrolase
Ubp2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1141
Score = 28.3 bits (60), Expect = 1.1
Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 3/44 (6%)
Frame = +2
Query: 500 EQRDLL---LKCASTAMSSKLIHQQKDHFSKIVVDAVLSLDTPL 622
EQ D L LKC +S+LI +H + + V SLDTP+
Sbjct: 571 EQSDTLRAALKCIGEVRNSRLITHYLEHGNLDIPPEVSSLDTPI 614
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 28.3 bits (60), Expect = 1.1
Identities = 22/100 (22%), Positives = 39/100 (39%)
Frame = +2
Query: 89 TDQTQGKPQLVSNINACQLVVDAVRTTLGPRGMDKLIVDHNGKAVISNDGATIMKLLDIV 268
T T + SN N+ LV D + P + + + + N A+ + +L+
Sbjct: 218 TTSTNTSTVIPSNPNSVFLV-DCTHSQC-PTDLPNIATTQHSLRYLDNASASAITVLERT 275
Query: 269 HPAAKTLVDIAKSQDAEVGDGTTSVVILAGEILKRLKPFV 388
HPAA + + S + D + + + K PFV
Sbjct: 276 HPAASSTMATESSHQSPSADSQAEELSKSQRVAKDDDPFV 315
>SPBC216.07c |tor2|SPBC646.01c|phosphatidylinositol kinase
Tor2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2337
Score = 26.6 bits (56), Expect = 3.4
Identities = 11/48 (22%), Positives = 23/48 (47%)
Frame = +2
Query: 473 VKIDNKSPEEQRDLLLKCASTAMSSKLIHQQKDHFSKIVVDAVLSLDT 616
V ++N PE ++ + C+ ++ Q DH ++V + + L T
Sbjct: 486 VYLENNDPEVRKTASITCSQLFARDPILSQTSDHAIQVVAEVLEKLLT 533
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 26.6 bits (56), Expect = 3.4
Identities = 24/90 (26%), Positives = 43/90 (47%), Gaps = 4/90 (4%)
Frame = -2
Query: 399 TPSSTNGFNLFRISPANITTEVVPSPTSAS*DFAMSTRVLAAG---*TISSNFMIVAPSF 229
T SST ++ ++ + PTS+S DF+ S +++G +I S F V+
Sbjct: 521 TSSSTPSSSIISSPMTSVLSSSSSIPTSSSSDFSSSITTISSGISSSSIPSTFSSVSSIL 580
Query: 228 -DITAFPL*STISLSIPRGPRVVLTASTTS 142
T+ P +++S+S +AST+S
Sbjct: 581 SSSTSSPSSTSLSISSSSTSSTFSSASTSS 610
>SPAC1250.01 |snf21|SPAC29A4.21|ATP-dependent DNA helicase
Snf21|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1199
Score = 26.2 bits (55), Expect = 4.5
Identities = 17/45 (37%), Positives = 24/45 (53%)
Frame = +2
Query: 389 EEGVHPRVLIRAVRTASRLAIEKIKEQAVKIDNKSPEEQRDLLLK 523
E+ V +L RA +L I+ QA K DNKS E+R+ L+
Sbjct: 863 EKSVEENILARA---QYKLDIDGKVIQAGKFDNKSTPEEREAFLR 904
>SPCC1620.14c |snf22|SPCC830.01c|ATP-dependent DNA helicase
Snf22|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1680
Score = 25.8 bits (54), Expect = 5.9
Identities = 16/50 (32%), Positives = 26/50 (52%)
Frame = +2
Query: 374 LKPFVEEGVHPRVLIRAVRTASRLAIEKIKEQAVKIDNKSPEEQRDLLLK 523
L+ E+ + +L RA +L ++ QA K DNKS E+R+ L+
Sbjct: 1309 LRLITEKSIEENILSRA---QYKLDLDGKVIQAGKFDNKSTPEEREAFLR 1355
>SPBC582.07c |rpn7||19S proteasome regulatory subunit
Rpn7|Schizosaccharomyces pombe|chr 2|||Manual
Length = 409
Score = 25.4 bits (53), Expect = 7.8
Identities = 24/90 (26%), Positives = 42/90 (46%), Gaps = 2/90 (2%)
Frame = +2
Query: 350 LAGEILKRLKPFVEEG--VHPRVLIRAVRTASRLAIEKIKEQAVKIDNKSPEEQRDLLLK 523
+ G++L++LKP +E+G + ++A + ++I A DLLL
Sbjct: 167 VVGQLLEKLKPLIEKGGDWERKNRLKAYQGIYLMSIRNFSGAA------------DLLLD 214
Query: 524 CASTAMSSKLIHQQKDHFSKIVVDAVLSLD 613
C ST S++L+ D V+ +SLD
Sbjct: 215 CMSTFSSTELL-PYYDVVRYAVISGAISLD 243
>SPAC30C2.07 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 842
Score = 25.4 bits (53), Expect = 7.8
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = -1
Query: 652 LLDSNHVERQKWSVQRQDSINNNLREVI 569
L DSNHV+ QK +DS N L +++
Sbjct: 56 LFDSNHVDGQKGDSVLRDSANAPLTDLM 83
>SPBC1604.18c |||vacuolar sorting protein |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 449
Score = 25.4 bits (53), Expect = 7.8
Identities = 17/64 (26%), Positives = 29/64 (45%)
Frame = +2
Query: 410 VLIRAVRTASRLAIEKIKEQAVKIDNKSPEEQRDLLLKCASTAMSSKLIHQQKDHFSKIV 589
VLI + L +I Q ID DL+ AS A S+ ++++ + S+++
Sbjct: 221 VLIFDSKIIKFLPNSQIDAQLASIDKSIDGSVADLIQARASIAQRSEFLNEELEQLSQVL 280
Query: 590 VDAV 601
AV
Sbjct: 281 NQAV 284
>SPBC1683.01 |||inorganic phosphate transporter |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 573
Score = 25.4 bits (53), Expect = 7.8
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = +1
Query: 184 DGQADCRSQWKGGYI 228
DG+ +C S+WK Y+
Sbjct: 555 DGKVECNSKWKSWYV 569
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,954,885
Number of Sequences: 5004
Number of extensions: 60308
Number of successful extensions: 194
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 178
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 187
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 321151040
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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