Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc12m22
(606 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U23517-9|AAB93334.2| 314|Caenorhabditis elegans Ubiquitin conju... 249 1e-66
AC024747-1|AAO21404.1| 203|Caenorhabditis elegans Ubiquitin con... 141 4e-34
AC024748-1|AAF60411.2| 218|Caenorhabditis elegans Ubiquitin con... 118 4e-27
AC024817-43|AAK93865.2| 151|Caenorhabditis elegans Ubiquitin co... 64 1e-10
Z68337-1|CAA92745.1| 147|Caenorhabditis elegans Hypothetical pr... 63 1e-10
S56051-1|AAB25489.2| 147|Caenorhabditis elegans ubiquitin-conju... 63 1e-10
AL110500-10|CAB60431.1| 170|Caenorhabditis elegans Hypothetical... 63 1e-10
AC025726-12|AAK73914.3| 243|Caenorhabditis elegans Ubiquitin co... 60 9e-10
Z22179-13|CAA80166.1| 164|Caenorhabditis elegans Hypothetical p... 52 3e-07
AF099919-11|AAC68796.1| 199|Caenorhabditis elegans Ubiquitin co... 52 3e-07
U08139-1|AAA83388.1| 192|Caenorhabditis elegans ubc-1 protein. 52 4e-07
AF045638-8|AAC02561.2| 192|Caenorhabditis elegans Ubiquitin con... 52 4e-07
U70849-3|AAK67232.1| 166|Caenorhabditis elegans Ubiquitin conju... 50 2e-06
AF106565-1|AAC97374.1| 166|Caenorhabditis elegans ubiquitin-con... 50 2e-06
U39674-5|AAA80415.2| 229|Caenorhabditis elegans Ubiquitin conju... 47 1e-05
AL032653-6|CAA21716.1| 152|Caenorhabditis elegans Hypothetical ... 44 1e-04
U40411-1|AAC47063.2| 679|Caenorhabditis elegans Ubiquitin conju... 42 3e-04
U13644-3|AAB52677.1| 230|Caenorhabditis elegans Ubiquitin e2 (c... 39 0.002
AF040645-12|AAB94978.2| 78|Caenorhabditis elegans Hypothetical... 38 0.004
U00035-7|AAA50648.2| 153|Caenorhabditis elegans Ubiquitin conju... 36 0.022
AC024876-5|AAF60891.2| 221|Caenorhabditis elegans Ubiquitin con... 33 0.21
Z98877-7|CAB63403.1| 292|Caenorhabditis elegans Hypothetical pr... 31 0.48
Z92834-2|CAB07383.1| 139|Caenorhabditis elegans Hypothetical pr... 31 0.64
Z83125-11|CAB05617.2| 320|Caenorhabditis elegans Hypothetical p... 28 5.9
U41026-5|AAA82352.2| 546|Caenorhabditis elegans Ubiquitin conju... 28 5.9
U39674-4|AAA80414.2| 182|Caenorhabditis elegans Ubiquitin conju... 28 5.9
AJ972875-1|CAI99633.1| 304|Caenorhabditis elegans beta-1,3-gluc... 28 5.9
Z81124-2|CAB03368.1| 151|Caenorhabditis elegans Hypothetical pr... 27 7.9
Z74039-6|CAA98505.2| 331|Caenorhabditis elegans Hypothetical pr... 27 7.9
U41538-5|AAG00012.2| 762|Caenorhabditis elegans Hypothetical pr... 27 7.9
>U23517-9|AAB93334.2| 314|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein6 protein.
Length = 314
Score = 249 bits (609), Expect = 1e-66
Identities = 110/170 (64%), Positives = 135/170 (79%)
Frame = +2
Query: 62 EKYNTKCPGVKRLMREAIELAEATEEYCARPLEDNLFEWHFTVQGPKGTEFEGGIYHGRI 241
E+YNTK GV+RLM+EA+EL + TE Y A+P+EDNLFEWHFT++G GT+FEGGIYHGRI
Sbjct: 3 EQYNTKNAGVRRLMKEAMELRQPTEMYHAQPMEDNLFEWHFTIRGTLGTDFEGGIYHGRI 62
Query: 242 LLPKEYPMHPPHIILLTPNGRFEINKKICLSISGHHPETWQPSWSIRTALLALIAFMPTP 421
+ P +YPM PP++ILLTPNGRFE+NKK+CLSISG+HPETW PSWSIRTALLALI F+P+
Sbjct: 63 IFPADYPMKPPNLILLTPNGRFELNKKVCLSISGYHPETWLPSWSIRTALLALIGFLPST 122
Query: 422 AEGTIGSLDYTPAERKILAKKSTNWSCSQCGEIKLLLSSTAAKPLTEEEQ 571
G +GSLDY P ER+ LAK S W C +CG + TA P+TE+ Q
Sbjct: 123 PGGALGSLDYPPKERQRLAKLSCEWKCKECG----CVMKTALLPITEDGQ 168
>AC024747-1|AAO21404.1| 203|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein26 protein.
Length = 203
Score = 141 bits (341), Expect = 4e-34
Identities = 58/118 (49%), Positives = 85/118 (72%)
Frame = +2
Query: 146 ARPLEDNLFEWHFTVQGPKGTEFEGGIYHGRILLPKEYPMHPPHIILLTPNGRFEINKKI 325
A PLE N+ EW + + G T +EGGIY G++L PK++P PP I++LTPNGRF+ N ++
Sbjct: 30 AAPLETNILEWRYIIIGAPKTPYEGGIYMGKLLFPKDFPFKPPAILMLTPNGRFQTNTRL 89
Query: 326 CLSISGHHPETWQPSWSIRTALLALIAFMPTPAEGTIGSLDYTPAERKILAKKSTNWS 499
CLSIS +HP+TW P+W++ T + L++FM + T+GSL + +ERK+LAKKS W+
Sbjct: 90 CLSISDYHPDTWNPAWTVSTIITGLMSFM-NDNQPTLGSLVTSESERKLLAKKSKQWN 146
>AC024748-1|AAF60411.2| 218|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein15 protein.
Length = 218
Score = 118 bits (283), Expect = 4e-27
Identities = 53/140 (37%), Positives = 87/140 (62%), Gaps = 3/140 (2%)
Frame = +2
Query: 89 VKRLMREAIELAE-ATEEYCARPLEDNLFEWHFTVQGPKGTEFEGGIYHGRILLPKEYPM 265
V+RL ++ +L + + A P EDN+ EWH+ ++G T F GG Y G+++ + +P
Sbjct: 21 VRRLQKDYAKLMQDPVDGIKALPNEDNILEWHYCLRGSPDTPFYGGYYWGKVIFKENFPW 80
Query: 266 HPPHIILLTPNGRFEINKKICLSISGHHPETWQPSWSIRTALLALIAFM--PTPAEGTIG 439
PP I ++TPNGRF+ N ++CLSIS +HPE+W P W++ L+ L +FM +PA G+I
Sbjct: 81 SPPAITMITPNGRFQTNTRLCLSISDYHPESWNPGWTVSAILIGLHSFMNENSPAAGSIA 140
Query: 440 SLDYTPAERKILAKKSTNWS 499
TP ++++ A S ++
Sbjct: 141 G---TPQDQRMYAAASKEFN 157
>AC024817-43|AAK93865.2| 151|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein13 protein.
Length = 151
Score = 63.7 bits (148), Expect = 1e-10
Identities = 37/113 (32%), Positives = 58/113 (51%), Gaps = 3/113 (2%)
Frame = +2
Query: 92 KRLMREAIEL-AEATEEYCARPLEDNLFEWHFTVQGPKGTEFEGGIYHGRILLPKEYPMH 268
+R+++E L A+ A P E N +H + GP + F GG++ + LP+EYPM
Sbjct: 7 RRIIKETQRLLADPVPGISANPDESNARYFHVMIAGPDDSPFAGGVFKLELFLPEEYPMA 66
Query: 269 PPHIILLTPNGRFEINK--KICLSISGHHPETWQPSWSIRTALLALIAFMPTP 421
P + +T I+K +ICL I + W P+ IRT LL++ A + P
Sbjct: 67 APKVRFMTKIYHPNIDKLGRICLDIL---KDKWSPALQIRTVLLSIQALLSAP 116
>Z68337-1|CAA92745.1| 147|Caenorhabditis elegans Hypothetical
protein M7.1 protein.
Length = 147
Score = 63.3 bits (147), Expect = 1e-10
Identities = 34/114 (29%), Positives = 55/114 (48%), Gaps = 3/114 (2%)
Frame = +2
Query: 89 VKRLMREAIELAEATEEYC-ARPLEDNLFEWHFTVQGPKGTEFEGGIYHGRILLPKEYPM 265
+KR+ +E +L C A P+ D+LF W T+ GP + ++GG++ I P +YP
Sbjct: 3 LKRIQKELQDLGRDPPAQCSAGPVGDDLFHWQATIMGPPESPYQGGVFFLTIHFPTDYPF 62
Query: 266 HPPHIILLTP--NGRFEINKKICLSISGHHPETWQPSWSIRTALLALIAFMPTP 421
PP + T + N ICL I W P+ +I LL++ + + P
Sbjct: 63 KPPKVAFTTRIYHPNINSNGSICLDIL---RSQWSPALTISKVLLSICSLLCDP 113
>S56051-1|AAB25489.2| 147|Caenorhabditis elegans
ubiquitin-conjugating enzyme protein.
Length = 147
Score = 63.3 bits (147), Expect = 1e-10
Identities = 34/114 (29%), Positives = 55/114 (48%), Gaps = 3/114 (2%)
Frame = +2
Query: 89 VKRLMREAIELAEATEEYC-ARPLEDNLFEWHFTVQGPKGTEFEGGIYHGRILLPKEYPM 265
+KR+ +E +L C A P+ D+LF W T+ GP + ++GG++ I P +YP
Sbjct: 3 LKRIQKELQDLGRDPPAQCSAGPVGDDLFHWQATIMGPPESPYQGGVFFLTIHFPTDYPF 62
Query: 266 HPPHIILLTP--NGRFEINKKICLSISGHHPETWQPSWSIRTALLALIAFMPTP 421
PP + T + N ICL I W P+ +I LL++ + + P
Sbjct: 63 KPPKVAFTTRIYHPNINSNGSICLDIL---RSQWSPALTISKVLLSICSLLCDP 113
>AL110500-10|CAB60431.1| 170|Caenorhabditis elegans Hypothetical
protein Y87G2A.9 protein.
Length = 170
Score = 63.3 bits (147), Expect = 1e-10
Identities = 43/127 (33%), Positives = 63/127 (49%), Gaps = 16/127 (12%)
Frame = +2
Query: 89 VKRLMREAIELAEATEE-YCARPL-EDNLFEWHFTVQGPKGTEFEGGIYHGRILLPKEYP 262
+KRLM E EL E A P+ EDN FEW + GP+ T F G++ RI P++YP
Sbjct: 6 LKRLMTEYKELTTRPPEGIIAAPIDEDNFFEWECLITGPEETCFANGVFPARITFPQDYP 65
Query: 263 MHPPHII----LLTPNGRFEINKKICLSI---SGHHP-------ETWQPSWSIRTALLAL 400
+ PP + + PN + ++C+SI G P E W P SI LL++
Sbjct: 66 LSPPKMRFTCGIFHPN--IYADGRVCISILHAPGDDPTGYELSNERWSPVQSIEKILLSV 123
Query: 401 IAFMPTP 421
++ + P
Sbjct: 124 VSMLAEP 130
>AC025726-12|AAK73914.3| 243|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein3 protein.
Length = 243
Score = 60.5 bits (140), Expect = 9e-10
Identities = 43/149 (28%), Positives = 67/149 (44%), Gaps = 14/149 (9%)
Frame = +2
Query: 65 KYNTKCPGVKRLMREAIEL-AEATEEYCARPLEDNLFEWHFTVQGPKGTEFEGGIYHGRI 241
K +T ++ L E L ++ E + EDNLF W + GP T ++GG + I
Sbjct: 4 KASTSSGALRALTMELKNLQSQPVEGFTIDVNEDNLFVWTVGIYGPPKTLYQGGYFKASI 63
Query: 242 LLPKEYPMHPPHIILLTPNGRFEI--NKKICLSISGHHP-----------ETWQPSWSIR 382
P YP PP + T + N +C+SI H P E W P+ S+R
Sbjct: 64 RFPSNYPYSPPSMKFTTKVWHPNVYENGDLCISIL-HSPIDDPQSGELACERWNPTQSVR 122
Query: 383 TALLALIAFMPTPAEGTIGSLDYTPAERK 469
T LL++I+ + P + ++D + RK
Sbjct: 123 TILLSVISLLNEPNTSSPANVDASVMYRK 151
>Z22179-13|CAA80166.1| 164|Caenorhabditis elegans Hypothetical
protein F58A4.10 protein.
Length = 164
Score = 52.0 bits (119), Expect = 3e-07
Identities = 34/128 (26%), Positives = 64/128 (50%), Gaps = 14/128 (10%)
Frame = +2
Query: 140 YCARPLEDN-LFEWHFTVQGPKGTEFEGGIYHGRILLPKEYPMHPPHIILLTPNGRFEIN 316
+ A ++DN +++W V GP T +EGG + + P++YP PP + ++ I+
Sbjct: 23 FSAGLVDDNDIYKWEVLVIGPPDTLYEGGFFKAILDFPRDYPQKPPKMKFISEIWHPNID 82
Query: 317 KK--ICLSISGHHP-----------ETWQPSWSIRTALLALIAFMPTPAEGTIGSLDYTP 457
K+ +C+SI H P E W P ++ T LL++I+ + P + ++D
Sbjct: 83 KEGNVCISIL-HDPGDDKWGYERPEERWLPVHTVETILLSVISMLTDPNFESPANVDAAK 141
Query: 458 AERKILAK 481
+R+ A+
Sbjct: 142 MQRENYAE 149
>AF099919-11|AAC68796.1| 199|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein20 protein.
Length = 199
Score = 52.0 bits (119), Expect = 3e-07
Identities = 34/115 (29%), Positives = 58/115 (50%), Gaps = 4/115 (3%)
Frame = +2
Query: 89 VKRLMREAIELAEATEE-YCARPLEDNLFEWHFTVQGPKGTEFEGGIYHGRILLPKEYPM 265
++R +E + +E +E L +NL E ++GP T + GG++ I +P +YP
Sbjct: 9 LQRECKEVVTNSEISETGIMIEILNENLTEIKGHIRGPPDTPYAGGMFDLDIKIPDQYPF 68
Query: 266 HPPHIILLTPNGRFEINKK---ICLSISGHHPETWQPSWSIRTALLALIAFMPTP 421
PP++ T ++ + ICL I + W S ++RT LL++ A M TP
Sbjct: 69 SPPNVKFSTKIWHPNVSSQTGVICLDIL---KDQWAASLTLRTVLLSIQALMCTP 120
>U08139-1|AAA83388.1| 192|Caenorhabditis elegans ubc-1 protein.
Length = 192
Score = 51.6 bits (118), Expect = 4e-07
Identities = 31/116 (26%), Positives = 53/116 (45%), Gaps = 3/116 (2%)
Frame = +2
Query: 83 PGVKRLMREAIELAEATEE-YCARPLEDNLFEWHFTVQGPKGTEFEGGIYHGRILLPKEY 259
P +RLMR+ +L E P EDN+ W + GP+ T FE G + + +EY
Sbjct: 4 PSRRRLMRDFKKLQEDPPAGVSGAPTEDNILTWEAIIFGPQETPFEDGTFKLSLEFTEEY 63
Query: 260 PMHPPHIILLTP--NGRFEINKKICLSISGHHPETWQPSWSIRTALLALIAFMPTP 421
P PP + ++ + + ICL I + W P++ + L ++ + + P
Sbjct: 64 PNKPPTVKFISKMFHPNVYADGSICLDILQNR---WSPTYDVAAILTSIQSLLDEP 116
>AF045638-8|AAC02561.2| 192|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein1 protein.
Length = 192
Score = 51.6 bits (118), Expect = 4e-07
Identities = 31/116 (26%), Positives = 53/116 (45%), Gaps = 3/116 (2%)
Frame = +2
Query: 83 PGVKRLMREAIELAEATEE-YCARPLEDNLFEWHFTVQGPKGTEFEGGIYHGRILLPKEY 259
P +RLMR+ +L E P EDN+ W + GP+ T FE G + + +EY
Sbjct: 4 PSRRRLMRDFKKLQEDPPAGVSGAPTEDNILTWEAIIFGPQETPFEDGTFKLSLEFTEEY 63
Query: 260 PMHPPHIILLTP--NGRFEINKKICLSISGHHPETWQPSWSIRTALLALIAFMPTP 421
P PP + ++ + + ICL I + W P++ + L ++ + + P
Sbjct: 64 PNKPPTVKFISKMFHPNVYADGSICLDILQNR---WSPTYDVAAILTSIQSLLDEP 116
>U70849-3|AAK67232.1| 166|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein9 protein.
Length = 166
Score = 49.6 bits (113), Expect = 2e-06
Identities = 26/81 (32%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Frame = +2
Query: 164 NLFEWHFTVQGPKGTEFEGGIYHGRILLPKEYPMHPPHIILLTP--NGRFEINKKICLSI 337
NLF W + G K T +EGG+Y R+L ++P PP P + + +CLS+
Sbjct: 37 NLFNWECAIPGRKDTIWEGGLYRIRMLFKDDFPSTPPKCKFEPPLFHPNVYPSGTVCLSL 96
Query: 338 SGHHPETWQPSWSIRTALLAL 400
+ + W+PS SI+ L+ +
Sbjct: 97 LDENKD-WKPSISIKQLLIGI 116
>AF106565-1|AAC97374.1| 166|Caenorhabditis elegans
ubiquitin-conjugating enzyme 9homolog protein.
Length = 166
Score = 49.6 bits (113), Expect = 2e-06
Identities = 26/81 (32%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Frame = +2
Query: 164 NLFEWHFTVQGPKGTEFEGGIYHGRILLPKEYPMHPPHIILLTP--NGRFEINKKICLSI 337
NLF W + G K T +EGG+Y R+L ++P PP P + + +CLS+
Sbjct: 37 NLFNWECAIPGRKDTIWEGGLYRIRMLFKDDFPSTPPKCKFEPPLFHPNVYPSGTVCLSL 96
Query: 338 SGHHPETWQPSWSIRTALLAL 400
+ + W+PS SI+ L+ +
Sbjct: 97 LDENKD-WKPSISIKQLLIGI 116
>U39674-5|AAA80415.2| 229|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein21 protein.
Length = 229
Score = 46.8 bits (106), Expect = 1e-05
Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 1/83 (1%)
Frame = +2
Query: 35 KLNKMAEIVEKYNTKCPGVKRLMREAIELAEATEEYCARPL-EDNLFEWHFTVQGPKGTE 211
KLNKM + N V R +E ++ TE + E+NL + ++GP+GT
Sbjct: 5 KLNKMQFSDKMSNLALARVTRKCKEVANASDITEAGIHVEIKENNLMDIKGFIKGPEGTP 64
Query: 212 FEGGIYHGRILLPKEYPMHPPHI 280
+ GG + ++ +P+ YP PP +
Sbjct: 65 YAGGTFEIKVDIPEHYPFEPPKV 87
>AL032653-6|CAA21716.1| 152|Caenorhabditis elegans Hypothetical
protein Y54E5B.4 protein.
Length = 152
Score = 43.6 bits (98), Expect = 1e-04
Identities = 29/119 (24%), Positives = 58/119 (48%), Gaps = 7/119 (5%)
Frame = +2
Query: 92 KRLMREAIEL-AEATEEYCA--RPLEDNLFEWHFTVQGPKGTEFEGGIYHGRILLPKEYP 262
+RLM+E +L +EA E ++L +W V G +GT + G ++ + +YP
Sbjct: 7 RRLMKELAQLKSEAPEGLLVDNTSTSNDLKQWKIGVVGAEGTLYAGEVFMLQFTFGPQYP 66
Query: 263 MHPPHIIL----LTPNGRFEINKKICLSISGHHPETWQPSWSIRTALLALIAFMPTPAE 427
+ P ++ + + N ICLSI + W P+ S+++ L++++ + + E
Sbjct: 67 FNSPEVMFVGETIPAHPHIYSNGHICLSILS---DDWTPALSVQSVCLSILSMLSSSKE 122
>U40411-1|AAC47063.2| 679|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein17 protein.
Length = 679
Score = 42.3 bits (95), Expect = 3e-04
Identities = 28/82 (34%), Positives = 36/82 (43%), Gaps = 11/82 (13%)
Frame = +2
Query: 188 VQGPKGTEFEGGIYHGRILLPKEYPMHPPHIILLTP---NGRFEIN----KKICLSI--- 337
+ GP T + G++ I P YP PP LT N RF N KICLSI
Sbjct: 449 ISGPDDTPYANGLFEFDIFFPTGYPFSPPKCAFLTTGSGNVRFNPNLYNDGKICLSILGT 508
Query: 338 -SGHHPETWQPSWSIRTALLAL 400
G E W P S+ L+++
Sbjct: 509 WEGRPEEKWNPYCSLMQVLVSI 530
>U13644-3|AAB52677.1| 230|Caenorhabditis elegans Ubiquitin e2
(conjugating enzyme)variant protein 2 protein.
Length = 230
Score = 39.1 bits (87), Expect = 0.002
Identities = 29/116 (25%), Positives = 50/116 (43%), Gaps = 5/116 (4%)
Frame = +2
Query: 89 VKRLMREAIELAEATEE-YCARPLE----DNLFEWHFTVQGPKGTEFEGGIYHGRILLPK 253
+ + E + E T + Y A+P+ D W TV GP+G+ +EGG Y + K
Sbjct: 37 INTVKEEKAKWDERTPQGYTAKPISFEGADIWCSWICTVPGPRGSPWEGGEYEVSVNFHK 96
Query: 254 EYPMHPPHIILLTPNGRFEINKKICLSISGHHPETWQPSWSIRTALLALIAFMPTP 421
+P+ PP TP ++ + + + E W S++ L + + TP
Sbjct: 97 -WPIIPPICEFKTPLHHPNVDLRGSIYLKMLEQEHWSSETSLKKLLREISNLLATP 151
>AF040645-12|AAB94978.2| 78|Caenorhabditis elegans Hypothetical
protein F52C6.12 protein.
Length = 78
Score = 38.3 bits (85), Expect = 0.004
Identities = 18/70 (25%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Frame = +2
Query: 89 VKRLMREAIELAEATEEYCAR-PLEDNLFEWHFTVQGPKGTEFEGGIYHGRILLPKEYPM 265
+KR+ +E +L C+ + D+L+ W T+ GP + ++GGI+ + + +
Sbjct: 3 LKRIQKELHDLGRDPPAQCSTGSVGDDLYHWQATIMGPPESPYQGGIFF--LTITSRQTI 60
Query: 266 HPPHIILLTP 295
H H L++P
Sbjct: 61 HSNHQRLISP 70
>U00035-7|AAA50648.2| 153|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein18 protein.
Length = 153
Score = 35.9 bits (79), Expect = 0.022
Identities = 23/90 (25%), Positives = 38/90 (42%), Gaps = 2/90 (2%)
Frame = +2
Query: 158 EDNLFEWHFTVQGPKGTEFEGGIYHGRILLPKEYPMHPPHIILLTP--NGRFEINKKICL 331
E NL +W + P + G + I P +YP PP + T + + K CL
Sbjct: 29 ETNLLKWTVLLI-PDKEPYNKGAFKVGITFPVDYPFKPPKVAFETKIYHPNVDEEGKFCL 87
Query: 332 SISGHHPETWQPSWSIRTALLALIAFMPTP 421
I E W+P+ ++AL++ + P
Sbjct: 88 PIV--TAENWKPATKTEQVMMALLSLINEP 115
>AC024876-5|AAF60891.2| 221|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein8 protein.
Length = 221
Score = 32.7 bits (71), Expect = 0.21
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +2
Query: 194 GPKGTEFEGGIYHGRILLPKEYPMHPPHI 280
GPK T +E G++ R+ +P +YP P I
Sbjct: 41 GPKDTAYENGVWRIRVDMPDKYPFKSPSI 69
>Z98877-7|CAB63403.1| 292|Caenorhabditis elegans Hypothetical
protein Y69H2.6 protein.
Length = 292
Score = 31.5 bits (68), Expect = 0.48
Identities = 32/109 (29%), Positives = 49/109 (44%), Gaps = 8/109 (7%)
Frame = +2
Query: 98 LMREAIELAEAT-EEYCARPLEDNLFEWHFTVQGPKGTEFEGGIYHGRILLPKEYP--MH 268
L E +E+ A + P +N F W + KG F GGI+ I +P E+P
Sbjct: 24 LAAEFVEVCRAPIDGIFVSPSANNKFLWFGVIFVRKGI-FGGGIFRFNIHIPLEFPDASD 82
Query: 269 PPHIILLTPNGRFEI----NKKICLSISGHHPETW-QPSWSIRTALLAL 400
P +I N + +K++CL+ S PE W + S+R L+ L
Sbjct: 83 LPRVIFEQSNLFHPLICTKSKELCLNRS--FPEGWKKEKHSLRRVLVVL 129
>Z92834-2|CAB07383.1| 139|Caenorhabditis elegans Hypothetical
protein F39B2.2 protein.
Length = 139
Score = 31.1 bits (67), Expect = 0.64
Identities = 22/78 (28%), Positives = 34/78 (43%), Gaps = 3/78 (3%)
Frame = +2
Query: 167 LFEWHFTVQGPKGTEFEGGIYHGRILLPKEYPMHPPHIILLTPNGRFEINKKICLSISGH 346
L W ++ GP T +E IY+ +I YP PP + T +N+ + I
Sbjct: 38 LTRWTASIIGPPRTPYESRIYNLQIQCGGNYPREPPTVRFTTKVHMVGVNQSNGV-IDKR 96
Query: 347 HPET---WQPSWSIRTAL 391
+ T W S+ I+T L
Sbjct: 97 NLTTLRNWSNSYMIKTVL 114
>Z83125-11|CAB05617.2| 320|Caenorhabditis elegans Hypothetical
protein T15D6.7 protein.
Length = 320
Score = 27.9 bits (59), Expect = 5.9
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = +1
Query: 355 DMAAFMVNKDCIASSHCIHANACRRHD 435
DMA F +N D I +S + C+R D
Sbjct: 221 DMAGFAINLDYILNSSAVFGTECKRGD 247
>U41026-5|AAA82352.2| 546|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein23 protein.
Length = 546
Score = 27.9 bits (59), Expect = 5.9
Identities = 11/35 (31%), Positives = 20/35 (57%)
Frame = +2
Query: 188 VQGPKGTEFEGGIYHGRILLPKEYPMHPPHIILLT 292
++G + T +EGGI+ I + + YP P + +T
Sbjct: 385 IKGVEETPYEGGIFELDIKIGESYPFKAPTVKFIT 419
>U39674-4|AAA80414.2| 182|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein22 protein.
Length = 182
Score = 27.9 bits (59), Expect = 5.9
Identities = 11/33 (33%), Positives = 16/33 (48%)
Frame = +2
Query: 182 FTVQGPKGTEFEGGIYHGRILLPKEYPMHPPHI 280
F + GP T +E G++ + P YP P I
Sbjct: 33 FHIAGPADTPYETGVFEVDLTFPDNYPNALPQI 65
>AJ972875-1|CAI99633.1| 304|Caenorhabditis elegans
beta-1,3-glucuronosyltransferase protein.
Length = 304
Score = 27.9 bits (59), Expect = 5.9
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = +1
Query: 355 DMAAFMVNKDCIASSHCIHANACRRHD 435
DMA F +N D I +S + C+R D
Sbjct: 221 DMAGFAINLDYILNSSAVFGTECKRGD 247
>Z81124-2|CAB03368.1| 151|Caenorhabditis elegans Hypothetical
protein T21B4.3 protein.
Length = 151
Score = 27.5 bits (58), Expect = 7.9
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = +2
Query: 332 SISGHHPETWQPSWSIRTALLALIAFMPTPAEGTIGSLDYTPAE 463
S++ P T P+ ++ T A + T +GT G++D TP E
Sbjct: 37 SVTTTPPTTTPPTTAVVTDCTTCTAALITLTQGTDGAVDATPVE 80
>Z74039-6|CAA98505.2| 331|Caenorhabditis elegans Hypothetical
protein K03B8.6 protein.
Length = 331
Score = 27.5 bits (58), Expect = 7.9
Identities = 22/88 (25%), Positives = 32/88 (36%)
Frame = +2
Query: 230 HGRILLPKEYPMHPPHIILLTPNGRFEINKKICLSISGHHPETWQPSWSIRTALLALIAF 409
H R L K P P I + P FE + +SG H + W++ T +
Sbjct: 216 HRRFQLAKNTPQDLPRNITIHPLSAFEWADGNQVVLSGEHFIIYDAYWNLATFTGHTRKY 275
Query: 410 MPTPAEGTIGSLDYTPAERKILAKKSTN 493
P +G + Y A +L TN
Sbjct: 276 FPNLPRDLLG-IVYNGAGETLLMYTKTN 302
>U41538-5|AAG00012.2| 762|Caenorhabditis elegans Hypothetical
protein R04E5.2 protein.
Length = 762
Score = 27.5 bits (58), Expect = 7.9
Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +2
Query: 353 ETWQPSWSIRTALLALIAFMPTPAEG-TIGSLDYTPAERKILAKKST 490
ET+ P W+ + A+L L+ + G T+G + TP E IL K +
Sbjct: 144 ETFMPVWA-QCAILCLLFSISALCSGLTLGLMALTPQELSILMKSGS 189
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,150,250
Number of Sequences: 27780
Number of extensions: 299717
Number of successful extensions: 737
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 710
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 730
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1300523034
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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