Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc12m21
(642 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_02_0119 + 6978697-6979045,6979519-6979581,6979757-6979866,697... 58 8e-09
08_01_0080 + 566509-566746,566904-567151,567347-567532,567639-56... 57 1e-08
02_05_1263 + 35316083-35316185,35317167-35317220,35317665-353179... 46 2e-05
03_03_0131 - 14706123-14706171,14706364-14706422,14706504-147067... 43 2e-04
09_04_0618 + 18988614-18989102,18989913-18990314,18990555-189908... 39 0.004
01_01_0956 + 7505206-7505322,7505860-7506723,7506841-7507260,750... 38 0.005
08_01_0673 - 5805218-5805349,5805936-5806026,5806416-5806471,580... 36 0.027
12_02_0998 + 25126114-25126596,25129213-25129339,25129349-251294... 36 0.036
10_08_0493 + 18299885-18299892,18300201-18300837,18301254-183016... 34 0.11
03_05_0388 + 23726957-23727418,23730016-23730262,23731072-237312... 34 0.11
10_08_0511 + 18435745-18436499,18436624-18436742,18436788-184373... 33 0.25
09_06_0277 - 21983049-21983080,21983250-21984788,21986619-219866... 31 0.78
06_03_0766 - 24425486-24426245,24430766-24430855,24430951-244310... 31 0.78
02_01_0703 + 5251901-5251950,5252783-5253554 31 1.0
08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,336... 30 1.4
04_04_1500 + 34010819-34011016,34013267-34013308,34014195-340142... 29 2.4
10_08_0962 + 21880919-21880983,21881100-21881487,21881807-218819... 29 3.1
04_03_0904 + 20717005-20718087 28 5.5
09_03_0041 + 11826788-11828002,11828101-11828563,11828668-118287... 28 7.2
12_02_0674 - 21745321-21746223,21746229-21747608 27 9.6
12_02_0046 + 12830974-12832386 27 9.6
12_01_1016 + 10337745-10337948 27 9.6
07_03_1147 + 24349811-24350161,24351031-24351366,24353260-243533... 27 9.6
01_06_0637 + 30763657-30763858,30765600-30766261 27 9.6
>02_02_0119 +
6978697-6979045,6979519-6979581,6979757-6979866,
6979969-6980154,6980266-6980361,6980493-6980564,
6980798-6980909,6982448-6982534,6982680-6983872
Length = 755
Score = 57.6 bits (133), Expect = 8e-09
Identities = 29/73 (39%), Positives = 46/73 (63%), Gaps = 3/73 (4%)
Frame = +1
Query: 424 QSINEYIRVPDRMVGLIIGRGGEQITRLQAESGCKIQMAPPTD---GNPDRLCTLTGSRD 594
Q ++ I +P+ VG+IIG+ GE I LQ +SG KIQ+ D G+ R L+G+ D
Sbjct: 162 QGTSKTIEIPNGRVGVIIGKSGETIKNLQLQSGAKIQVTRDLDALPGSQTRPVELSGTPD 221
Query: 595 AIQRAKELVNQIV 633
I RA++L+N+++
Sbjct: 222 QISRAEQLINEVL 234
Score = 55.2 bits (127), Expect = 4e-08
Identities = 26/69 (37%), Positives = 45/69 (65%), Gaps = 4/69 (5%)
Frame = +1
Query: 442 IRVPDRMVGLIIGRGGEQITRLQAESGCKIQMA----PPTDGNPDRLCTLTGSRDAIQRA 609
+++ + VGL+IG+GGE I +QA+SG +IQ+ PP D +R + G+++ I+ A
Sbjct: 262 MKIANNKVGLVIGKGGETIKSMQAKSGARIQVVPLHLPPGDPATERTVYIDGTQEQIETA 321
Query: 610 KELVNQIVN 636
K+LV ++ N
Sbjct: 322 KQLVIEVTN 330
>08_01_0080 +
566509-566746,566904-567151,567347-567532,567639-567734,
567836-567907,567990-568106,570531-571676
Length = 700
Score = 56.8 bits (131), Expect = 1e-08
Identities = 29/67 (43%), Positives = 43/67 (64%), Gaps = 4/67 (5%)
Frame = +1
Query: 448 VPDRMVGLIIGRGGEQITRLQAESGCKIQMAP--PTDG--NPDRLCTLTGSRDAIQRAKE 615
VPD VGLIIG+GGE I LQ SG +IQ+ P P +G +R +TG++ I+ AK+
Sbjct: 252 VPDNKVGLIIGKGGETIKTLQTRSGARIQLIPQHPPEGVTLTERTVRITGNKKQIEAAKD 311
Query: 616 LVNQIVN 636
++ Q ++
Sbjct: 312 MIKQAMS 318
Score = 54.4 bits (125), Expect = 7e-08
Identities = 26/75 (34%), Positives = 42/75 (56%), Gaps = 3/75 (4%)
Frame = +1
Query: 418 PDQSINEYIRVPDRMVGLIIGRGGEQITRLQAESGCKIQMAPPTDGN---PDRLCTLTGS 588
P Q + I VP+ VG++IG+ GE I LQ SG KIQ+ + + P R L G+
Sbjct: 148 PGQETSRIINVPNNKVGVLIGKSGETIRNLQMNSGAKIQITKDAEADANAPTRSVELVGT 207
Query: 589 RDAIQRAKELVNQIV 633
++I +A+ L+ ++
Sbjct: 208 LESIDKAERLIKNVI 222
>02_05_1263 +
35316083-35316185,35317167-35317220,35317665-35317903,
35317989-35318089,35318390-35318583,35318885-35319003,
35319624-35319749,35320081-35320142,35320265-35320348,
35320580-35320664
Length = 388
Score = 46.4 bits (105), Expect = 2e-05
Identities = 23/67 (34%), Positives = 39/67 (58%), Gaps = 3/67 (4%)
Frame = +1
Query: 442 IRVPDRMVGLIIGRGGEQITRLQAESGCKIQMAPPTD---GNPDRLCTLTGSRDAIQRAK 612
I + D +G ++GR G IT + SG +I+++ D G +R T+TG+ +AIQ A+
Sbjct: 289 IGIADEHIGAVVGRAGRNITEIIQASGARIKISDRGDFIAGTSERKVTITGTSEAIQAAE 348
Query: 613 ELVNQIV 633
++ Q V
Sbjct: 349 SMIMQRV 355
Score = 41.1 bits (92), Expect = 7e-04
Identities = 21/61 (34%), Positives = 35/61 (57%), Gaps = 3/61 (4%)
Frame = +1
Query: 448 VPDRMVGLIIGRGGEQITRLQAESGCKIQMAPPTD---GNPDRLCTLTGSRDAIQRAKEL 618
V + G IIG+GG I Q++SG +IQ++ + G DR+ ++G D + +A EL
Sbjct: 65 VSNTAAGCIIGKGGSTINEFQSQSGARIQLSRSHEFFPGTNDRIIMVSGLFDEVIKAMEL 124
Query: 619 V 621
+
Sbjct: 125 I 125
Score = 35.1 bits (77), Expect = 0.048
Identities = 23/61 (37%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Frame = +1
Query: 448 VPDRMVGLIIGRGGEQITRLQAESGCKIQMAPPTD---GNPDRLCTLTGSRDAIQRAKEL 618
VP+ G IIG+GG I +S I+++P + G DRL T+TG D RA L
Sbjct: 149 VPNSSCGGIIGKGGSTIKSFIEDSHAGIKISPQDNNFVGLHDRLVTVTGPLDHQMRAIYL 208
Query: 619 V 621
+
Sbjct: 209 I 209
>03_03_0131 -
14706123-14706171,14706364-14706422,14706504-14706770,
14706857-14707114,14707207-14707629,14707942-14708514
Length = 542
Score = 43.2 bits (97), Expect = 2e-04
Identities = 20/57 (35%), Positives = 34/57 (59%)
Frame = +1
Query: 418 PDQSINEYIRVPDRMVGLIIGRGGEQITRLQAESGCKIQMAPPTDGNPDRLCTLTGS 588
PD ++ Y+ P R +G IIGRGGE +++A++ KI++ G +R+ T+ S
Sbjct: 37 PDDTVYRYL-CPSRKIGSIIGRGGEIAKQMRADTQAKIRIGESVSGCDERVITIFSS 92
Score = 29.9 bits (64), Expect = 1.8
Identities = 16/59 (27%), Positives = 31/59 (52%), Gaps = 5/59 (8%)
Frame = +1
Query: 448 VPDRMVGLIIGRGGEQITRLQAESGCKIQM-----APPTDGNPDRLCTLTGSRDAIQRA 609
VP +G IIG+GG I +++++G I++ P + D L ++G +++A
Sbjct: 144 VPSDQIGCIIGKGGHIIQGIRSDTGAHIRVLSNENLPACAISGDELLQISGDSTVVRKA 202
Score = 28.3 bits (60), Expect = 5.5
Identities = 17/72 (23%), Positives = 33/72 (45%), Gaps = 8/72 (11%)
Frame = +1
Query: 418 PDQSINEY---IRVPDRMVGLIIGRGGEQITRLQAESGCKIQM-----APPTDGNPDRLC 573
P+ +I Y + V +G +IG+GG IT ++ S I++ P + +
Sbjct: 358 PESAIPSYTTRLLVSTSRIGCLIGKGGSIITEIRRTSRANIRILSKENVPKVAAEDEEMV 417
Query: 574 TLTGSRDAIQRA 609
++G D ++ A
Sbjct: 418 QISGDLDVVRHA 429
>09_04_0618 +
18988614-18989102,18989913-18990314,18990555-18990806,
18991564-18991941,18992350-18992426,18992700-18992808,
18993424-18993574,18993810-18993903,18997072-18997474,
18997590-18997742,18998115-18998474
Length = 955
Score = 38.7 bits (86), Expect = 0.004
Identities = 16/48 (33%), Positives = 29/48 (60%)
Frame = +1
Query: 454 DRMVGLIIGRGGEQITRLQAESGCKIQMAPPTDGNPDRLCTLTGSRDA 597
+ MVG IIG+GG I LQ+E+G I++ P + +R+ ++ ++
Sbjct: 252 NEMVGSIIGKGGSTIRALQSETGASIKIIEPNSDSEERVIVISAHENS 299
Score = 36.3 bits (80), Expect = 0.021
Identities = 19/59 (32%), Positives = 35/59 (59%), Gaps = 6/59 (10%)
Frame = +1
Query: 463 VGLIIGRGGEQITRLQAESGCKIQM------APPTDGNPDRLCTLTGSRDAIQRAKELV 621
VG ++G+GG+ + R++ ESG +I++ PP D L ++G+ A+++A LV
Sbjct: 120 VGCVLGKGGKTVERMRQESGAQIRVFRNRDQLPPWAAPVDELIHISGNFSAVRKALLLV 178
>01_01_0956 +
7505206-7505322,7505860-7506723,7506841-7507260,
7508091-7508342,7508696-7508953,7509798-7509877,
7509959-7510070,7510492-7510541,7511070-7511171,
7511215-7511276,7511888-7511928
Length = 785
Score = 38.3 bits (85), Expect = 0.005
Identities = 20/66 (30%), Positives = 37/66 (56%), Gaps = 4/66 (6%)
Frame = +1
Query: 448 VPDRMVGLIIGRGGEQITRLQAESGCKIQMAP---PTDGNP-DRLCTLTGSRDAIQRAKE 615
V D VG ++G+ G I ++ +S C+I+++ P P D LC +TG D++++
Sbjct: 281 VLDSQVGWLLGKNGSVIKQMSTDSCCEIRVSKDKLPLCALPRDELCQITGELDSVRKGLN 340
Query: 616 LVNQIV 633
V Q++
Sbjct: 341 TVAQLL 346
Score = 35.9 bits (79), Expect = 0.027
Identities = 15/41 (36%), Positives = 26/41 (63%)
Frame = +1
Query: 463 VGLIIGRGGEQITRLQAESGCKIQMAPPTDGNPDRLCTLTG 585
VG IIG+GG I +Q ++GC+I++ + DR+ ++G
Sbjct: 425 VGGIIGKGGNNIKSIQNDTGCEIKVLDTVPKSEDRIVFISG 465
Score = 31.5 bits (68), Expect = 0.59
Identities = 15/47 (31%), Positives = 26/47 (55%)
Frame = +1
Query: 442 IRVPDRMVGLIIGRGGEQITRLQAESGCKIQMAPPTDGNPDRLCTLT 582
I P G +IG+GG I +++ E+G KI++ G +R+ +T
Sbjct: 92 ILCPTSKSGNVIGKGGGIIAKIRQETGVKIRVDEVVPGCDERVIVIT 138
>08_01_0673 -
5805218-5805349,5805936-5806026,5806416-5806471,
5806571-5806852,5806924-5807057,5807088-5807163,
5807247-5807747,5808454-5809037,5809579-5809597
Length = 624
Score = 35.9 bits (79), Expect = 0.027
Identities = 19/61 (31%), Positives = 32/61 (52%)
Frame = +1
Query: 451 PDRMVGLIIGRGGEQITRLQAESGCKIQMAPPTDGNPDRLCTLTGSRDAIQRAKELVNQI 630
P +GL+IG+GG I ++ ESG +I + + + + T+T S +A AK +
Sbjct: 322 PAGKIGLVIGKGGVTIKSIRKESGARIDVDDSKNDREESIITIT-SNEATDDAKSAAVEA 380
Query: 631 V 633
V
Sbjct: 381 V 381
Score = 35.1 bits (77), Expect = 0.048
Identities = 14/50 (28%), Positives = 29/50 (58%)
Frame = +1
Query: 421 DQSINEYIRVPDRMVGLIIGRGGEQITRLQAESGCKIQMAPPTDGNPDRL 570
D+ + I PDR++G +IG+ G+ I ++ ++ K+++ P G R+
Sbjct: 46 DELVVYRILCPDRVIGNVIGKNGKVINSIRQQTSAKVKVVDPHPGADKRV 95
>12_02_0998 +
25126114-25126596,25129213-25129339,25129349-25129459,
25130122-25130270,25130356-25130643,25130753-25130941,
25131445-25131619,25132219-25132316
Length = 539
Score = 35.5 bits (78), Expect = 0.036
Identities = 20/50 (40%), Positives = 29/50 (58%)
Frame = +1
Query: 418 PDQSINEYIRVPDRMVGLIIGRGGEQITRLQAESGCKIQMAPPTDGNPDR 567
P +S+ I VP + VG +IGR GE I ++ ES +I++ G PDR
Sbjct: 112 PGESVFR-ILVPAQKVGAVIGRKGEFIKKMCEESRARIKVLDGPPGVPDR 160
Score = 30.7 bits (66), Expect = 1.0
Identities = 17/66 (25%), Positives = 31/66 (46%)
Frame = +1
Query: 430 INEYIRVPDRMVGLIIGRGGEQITRLQAESGCKIQMAPPTDGNPDRLCTLTGSRDAIQRA 609
I ++VP +IG G I+ ++ SG I + G + ++GS +Q A
Sbjct: 387 ITHSMQVPLSYADAVIGAAGASISYIRRHSGATISIQEGVPG--EMTVEISGSASQVQTA 444
Query: 610 KELVNQ 627
++L+ Q
Sbjct: 445 QQLIKQ 450
>10_08_0493 +
18299885-18299892,18300201-18300837,18301254-18301676,
18301769-18302014,18302124-18302789,18303228-18303283,
18303367-18303460,18303559-18303738
Length = 769
Score = 33.9 bits (74), Expect = 0.11
Identities = 13/63 (20%), Positives = 33/63 (52%)
Frame = +1
Query: 445 RVPDRMVGLIIGRGGEQITRLQAESGCKIQMAPPTDGNPDRLCTLTGSRDAIQRAKELVN 624
R+P+ + +IG GG + ++ SG ++++ G+ + + + G D ++ A+ L+
Sbjct: 688 RIPNSYLESVIGAGGVNLAEIRQISGARVKLHEAHPGSSESIVEIQGIPDQVKAAQSLLQ 747
Query: 625 QIV 633
+
Sbjct: 748 GFI 750
Score = 33.1 bits (72), Expect = 0.19
Identities = 15/49 (30%), Positives = 26/49 (53%)
Frame = +1
Query: 406 TNLLPDQSINEYIRVPDRMVGLIIGRGGEQITRLQAESGCKIQMAPPTD 552
+ L + + + VP VG IIG GG+ IT ++ +G +I++ D
Sbjct: 377 STLAENHHLTTRLVVPSNKVGCIIGEGGKVITEMRRRTGAEIRVYSKAD 425
Score = 30.3 bits (65), Expect = 1.4
Identities = 14/61 (22%), Positives = 31/61 (50%)
Frame = +1
Query: 442 IRVPDRMVGLIIGRGGEQITRLQAESGCKIQMAPPTDGNPDRLCTLTGSRDAIQRAKELV 621
I P + +G ++GRGG+ + L+ + KI++A G +R+ + + A + +
Sbjct: 57 ILCPVKKIGSVLGRGGDIVKALRDTTKAKIRVADSIPGADERVIIIFNYSSQTEEAAQNI 116
Query: 622 N 624
+
Sbjct: 117 S 117
>03_05_0388 +
23726957-23727418,23730016-23730262,23731072-23731220,
23731313-23731597,23731665-23731889,23734251-23734445
Length = 520
Score = 33.9 bits (74), Expect = 0.11
Identities = 19/50 (38%), Positives = 29/50 (58%)
Frame = +1
Query: 418 PDQSINEYIRVPDRMVGLIIGRGGEQITRLQAESGCKIQMAPPTDGNPDR 567
P +S+ I +P + VG IIGR GE I ++ ES +I++ G P+R
Sbjct: 105 PGESVFR-ILIPAQKVGAIIGRKGEFIKKMCEESKARIKILDGPPGVPER 153
>10_08_0511 +
18435745-18436499,18436624-18436742,18436788-18437372,
18438534-18438667,18439128-18439148,18439656-18439739,
18439832-18440077,18440763-18440925,18441024-18441066,
18441392-18441773,18442212-18442267,18442351-18442417,
18442542-18442721
Length = 944
Score = 32.7 bits (71), Expect = 0.25
Identities = 14/49 (28%), Positives = 26/49 (53%)
Frame = +1
Query: 406 TNLLPDQSINEYIRVPDRMVGLIIGRGGEQITRLQAESGCKIQMAPPTD 552
+ L + + + VP VG I+G GG+ IT ++ +G +I++ D
Sbjct: 587 STLAENHQLTTRLVVPSNKVGCILGEGGKVITEMRRRTGAEIRVYSKAD 635
>09_06_0277 -
21983049-21983080,21983250-21984788,21986619-21986655,
21987612-21987665,21987781-21987893,21988272-21988660,
21988783-21988903,21989245-21989342,21989963-21990153
Length = 857
Score = 31.1 bits (67), Expect = 0.78
Identities = 13/28 (46%), Positives = 15/28 (53%)
Frame = +1
Query: 235 SKRPLEDGPEPTPKKLAPVEPVYTPQPP 318
S P EP+P + AP PVY P PP
Sbjct: 649 SYEPSPPSYEPSPPEYAPEPPVYAPYPP 676
Score = 30.7 bits (66), Expect = 1.0
Identities = 12/29 (41%), Positives = 18/29 (62%), Gaps = 2/29 (6%)
Frame = +1
Query: 244 PLEDGPE--PTPKKLAPVEPVYTPQPPVM 324
P PE P+P ++AP P+ TP PP++
Sbjct: 528 PYPSPPEIVPSPPEIAPSPPIVTPMPPII 556
Score = 28.3 bits (60), Expect = 5.5
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = +1
Query: 244 PLEDGPEPTPKKLAPVEPVYTPQPP 318
P E P P+P + P P Y P PP
Sbjct: 631 PPEITPYPSPPDIVPSPPSYEPSPP 655
Score = 28.3 bits (60), Expect = 5.5
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +1
Query: 262 EPTPKKLAPVEPVYTPQPPV 321
EP+P P P Y P+PPV
Sbjct: 651 EPSPPSYEPSPPEYAPEPPV 670
Score = 28.3 bits (60), Expect = 5.5
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = +1
Query: 265 PTPKKLAPVEPVYTPQPP 318
P+P + AP PVY P PP
Sbjct: 708 PSPPEYAPEPPVYAPYPP 725
Score = 27.9 bits (59), Expect = 7.2
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = +1
Query: 244 PLEDGPEPTPKKLAPVEPVYTPQPPVM 324
P E P P+P ++ P P P PP++
Sbjct: 523 PPEITPYPSPPEIVPSPPEIAPSPPIV 549
>06_03_0766 -
24425486-24426245,24430766-24430855,24430951-24431070,
24431568-24431746,24432046-24432231,24432454-24432547,
24432679-24432743,24433652-24433987
Length = 609
Score = 31.1 bits (67), Expect = 0.78
Identities = 18/65 (27%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Frame = +1
Query: 442 IRVPDRMVGLIIGRGGEQITRLQAESGCKIQMAPPTDGNPD-RLCTLTGSRDAIQRAKEL 618
I V + G IIG+GG + +G K+ + + NP+ + L G+ D I+ A +
Sbjct: 485 ISVDASLAGGIIGKGGTNTKHISRMTGAKLAIR-DNESNPNLKNIELEGTFDQIKHASAM 543
Query: 619 VNQIV 633
V +++
Sbjct: 544 VTELI 548
>02_01_0703 + 5251901-5251950,5252783-5253554
Length = 273
Score = 30.7 bits (66), Expect = 1.0
Identities = 17/64 (26%), Positives = 30/64 (46%)
Frame = +1
Query: 442 IRVPDRMVGLIIGRGGEQITRLQAESGCKIQMAPPTDGNPDRLCTLTGSRDAIQRAKELV 621
I V + G IIGRGG ++ +G K+ + + L G+ D I+ A +V
Sbjct: 148 ISVDASLAGGIIGRGGVNTKQISRVTGAKLAIRDHESDTNLKNIELEGTFDQIKNASAMV 207
Query: 622 NQIV 633
+++
Sbjct: 208 RELI 211
>08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,
33643-34147,34250-34358,34436-34548,34619-34806,
35481-36129,36169-36691,36760-36911,37042-37141,
37301-37416
Length = 1530
Score = 30.3 bits (65), Expect = 1.4
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = +1
Query: 244 PLEDGPEPTPKKLAPVEPVYTPQPP 318
PL +GP P P P +P P PP
Sbjct: 1141 PLPEGPPPLPSDSPPCQPPLPPSPP 1165
>04_04_1500 +
34010819-34011016,34013267-34013308,34014195-34014204,
34014526-34014586,34014621-34014678,34015266-34015412,
34015643-34016205,34018942-34019728
Length = 621
Score = 29.5 bits (63), Expect = 2.4
Identities = 16/64 (25%), Positives = 32/64 (50%)
Frame = +1
Query: 442 IRVPDRMVGLIIGRGGEQITRLQAESGCKIQMAPPTDGNPDRLCTLTGSRDAIQRAKELV 621
I V + G IIG+GG ++ +G K+ + + + L G+ D I++A +V
Sbjct: 492 ISVDASLAGGIIGKGGVNTKQICRVTGVKLSIRDHESDSNLKNIELEGNFDQIKQASNMV 551
Query: 622 NQIV 633
+++
Sbjct: 552 GELI 555
>10_08_0962 +
21880919-21880983,21881100-21881487,21881807-21881931,
21882374-21882374,21882891-21883115,21888956-21889083,
21889176-21889227,21890205-21890351,21890444-21890566,
21890648-21890722,21890812-21890931,21892546-21892632,
21893115-21893183,21893262-21893353,21893465-21893584,
21893725-21893767,21893848-21893910,21894091-21894162,
21894247-21894291,21894354-21894424,21894508-21894573,
21894715-21894799
Length = 753
Score = 29.1 bits (62), Expect = 3.1
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +1
Query: 421 DQSINEYIRVPDRMVGLIIGRGGEQITR 504
D + E I VP VGL+IG GG I +
Sbjct: 667 DSMVEEEISVPMEKVGLVIGSGGATIKK 694
>04_03_0904 + 20717005-20718087
Length = 360
Score = 28.3 bits (60), Expect = 5.5
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = +1
Query: 259 PEPTPKKLAPVEPVYTPQP 315
P+PTP P P YTP P
Sbjct: 98 PKPTPPAHTPTPPTYTPTP 116
>09_03_0041 +
11826788-11828002,11828101-11828563,11828668-11828798,
11829227-11829577,11829723-11829879,11829968-11830260,
11830367-11830426,11830530-11830619,11830774-11830857
Length = 947
Score = 27.9 bits (59), Expect = 7.2
Identities = 12/29 (41%), Positives = 14/29 (48%)
Frame = +1
Query: 223 IGGGSKRPLEDGPEPTPKKLAPVEPVYTP 309
+GG + EDGP P P L PV P
Sbjct: 157 VGGEAAEAQEDGPRPEPSFLLGSRPVSAP 185
>12_02_0674 - 21745321-21746223,21746229-21747608
Length = 760
Score = 27.5 bits (58), Expect = 9.6
Identities = 11/34 (32%), Positives = 16/34 (47%)
Frame = +1
Query: 247 LEDGPEPTPKKLAPVEPVYTPQPPVMNFVDSVSP 348
L +P PKK+ P P P P + ++ SP
Sbjct: 405 LPSSSKPAPKKITPTPPTLAPPPLISPKEETPSP 438
>12_02_0046 + 12830974-12832386
Length = 470
Score = 27.5 bits (58), Expect = 9.6
Identities = 10/29 (34%), Positives = 15/29 (51%)
Frame = +1
Query: 244 PLEDGPEPTPKKLAPVEPVYTPQPPVMNF 330
P E P P + P EP +P PP+ ++
Sbjct: 339 PFETPPSPHAPRHDPFEPPPSPDPPIQSY 367
>12_01_1016 + 10337745-10337948
Length = 67
Score = 27.5 bits (58), Expect = 9.6
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = -1
Query: 363 TTNRNWRYTVNKIHNWRLWCI 301
TT RNW+Y N + WR + +
Sbjct: 37 TTTRNWKYHGNMMRPWRKYVV 57
>07_03_1147 +
24349811-24350161,24351031-24351366,24353260-24353376,
24353585-24353647,24354066-24354139,24354216-24354306,
24354791-24354850,24355270-24355462,24356242-24356522,
24357435-24357536,24357664-24357774,24358410-24358475,
24358562-24358660,24358757-24358788,24359171-24359274,
24359380-24359507,24359625-24359756,24360051-24360359,
24360887-24361071,24361161-24361263,24361407-24361552,
24361748-24361827,24361901-24362103
Length = 1121
Score = 27.5 bits (58), Expect = 9.6
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = +1
Query: 259 PEPTPKKLAPVEPVYTPQPPV 321
P P P+ L P P PQPPV
Sbjct: 55 PPPPPRTLPPPPPPPPPQPPV 75
>01_06_0637 + 30763657-30763858,30765600-30766261
Length = 287
Score = 27.5 bits (58), Expect = 9.6
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = +1
Query: 247 LEDGPEPTPKKLAPVEPVYTPQP 315
LEDGP P P L+P P P P
Sbjct: 22 LEDGPNPLPSHLSP-SPSLLPSP 43
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,734,580
Number of Sequences: 37544
Number of extensions: 296496
Number of successful extensions: 1271
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1001
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1262
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1584867848
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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