Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc12m18
(685 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M36035-1|AAA03652.1| 169|Homo sapiens protein ( Human periphera... 173 6e-43
BT006949-1|AAP35595.1| 169|Homo sapiens benzodiazapine receptor... 173 6e-43
BC001110-1|AAH01110.1| 169|Homo sapiens translocator protein (1... 173 6e-43
AY383615-1|AAQ75703.1| 169|Homo sapiens benzodiazapine receptor... 173 6e-43
Z82214-1|CAB55884.1| 169|Homo sapiens translocator protein (18k... 171 2e-42
U12421-1|AAA83252.1| 169|Homo sapiens mitochondrial benzodiazep... 171 2e-42
CR456409-1|CAG30295.1| 169|Homo sapiens BZRP protein. 171 2e-42
AY998017-1|AAY45787.1| 169|Homo sapiens peripheral benzodiazepi... 171 2e-42
AF075590-1|AAC31173.1| 143|Homo sapiens peripheral-type benzodi... 165 1e-40
AF075589-1|AAC31172.1| 143|Homo sapiens peripheral-type benzodi... 165 1e-40
L21954-1|AAA18228.1| 169|Homo sapiens peripheral benzodiazepine... 131 2e-30
AL031778-2|CAB44739.1| 170|Homo sapiens protein ( Human DNA seq... 103 4e-22
AB076381-1|BAC00959.1| 61|Homo sapiens Peripheral-type Benzodi... 59 2e-08
AB076380-1|BAC00958.1| 62|Homo sapiens Peripheral-type Benzodi... 58 3e-08
AB076379-1|BAC00957.1| 62|Homo sapiens Peripheral-type Benzodi... 58 3e-08
AB209076-1|BAD92313.1| 234|Homo sapiens Kv channel interacting ... 32 2.2
AL121747-11|CAO03633.1| 340|Homo sapiens RanBP-type and C3HC4-t... 30 8.8
AK126962-1|BAC86765.1| 143|Homo sapiens protein ( Homo sapiens ... 30 8.8
>M36035-1|AAA03652.1| 169|Homo sapiens protein ( Human peripheral
benzodiazepine receptor (hpbs) mRNA, complete cds. ).
Length = 169
Score = 173 bits (420), Expect = 6e-43
Identities = 76/158 (48%), Positives = 106/158 (67%)
Frame = +3
Query: 126 PALGSIILPNVGGWANGLFFAGQIRKDNSEKSWYDELKKPSWTPPKWVFGPAWTVLYSSM 305
PA+G + P++G + F G+ + WY L+KPSW PP WV GP W LYS+M
Sbjct: 7 PAMGFTLAPSLGCFVGSRFVHGEGLR------WYAGLQKPSWHPPHWVLGPVWGTLYSAM 60
Query: 306 GYASYLIWEECDGFTEDAVLPLTLYGVQLLLNWSWTPIFFGLKDFKLAFIEISVLSGAAV 485
GY SYL+W+E GFTE AV+PL LY QL LNW+W PIFFG + A +++ ++SGAA
Sbjct: 61 GYGSYLVWKELGGFTEKAVVPLGLYTGQLALNWAWPPIFFGARQMGWALVDLLLVSGAAA 120
Query: 486 ATTLSFGSVNKTAGLLLVPYLAWLGYASSLSYYIWKNN 599
ATT+++ V+ A LL PYLAWL +A++L+Y +W++N
Sbjct: 121 ATTVAWYQVSPLAARLLYPYLAWLAFATTLNYCVWRDN 158
>BT006949-1|AAP35595.1| 169|Homo sapiens benzodiazapine receptor
(peripheral) protein.
Length = 169
Score = 173 bits (420), Expect = 6e-43
Identities = 76/158 (48%), Positives = 106/158 (67%)
Frame = +3
Query: 126 PALGSIILPNVGGWANGLFFAGQIRKDNSEKSWYDELKKPSWTPPKWVFGPAWTVLYSSM 305
PA+G + P++G + F G+ + WY L+KPSW PP WV GP W LYS+M
Sbjct: 7 PAMGFTLAPSLGCFVGSRFVHGEGLR------WYAGLQKPSWHPPHWVLGPVWGTLYSAM 60
Query: 306 GYASYLIWEECDGFTEDAVLPLTLYGVQLLLNWSWTPIFFGLKDFKLAFIEISVLSGAAV 485
GY SYL+W+E GFTE AV+PL LY QL LNW+W PIFFG + A +++ ++SGAA
Sbjct: 61 GYGSYLVWKELGGFTEKAVVPLGLYTGQLALNWAWPPIFFGARQMGWALVDLLLVSGAAA 120
Query: 486 ATTLSFGSVNKTAGLLLVPYLAWLGYASSLSYYIWKNN 599
ATT+++ V+ A LL PYLAWL +A++L+Y +W++N
Sbjct: 121 ATTVAWYQVSPLAARLLYPYLAWLAFATTLNYCVWRDN 158
>BC001110-1|AAH01110.1| 169|Homo sapiens translocator protein
(18kDa) protein.
Length = 169
Score = 173 bits (420), Expect = 6e-43
Identities = 76/158 (48%), Positives = 106/158 (67%)
Frame = +3
Query: 126 PALGSIILPNVGGWANGLFFAGQIRKDNSEKSWYDELKKPSWTPPKWVFGPAWTVLYSSM 305
PA+G + P++G + F G+ + WY L+KPSW PP WV GP W LYS+M
Sbjct: 7 PAMGFTLAPSLGCFVGSRFVHGEGLR------WYAGLQKPSWHPPHWVLGPVWGTLYSAM 60
Query: 306 GYASYLIWEECDGFTEDAVLPLTLYGVQLLLNWSWTPIFFGLKDFKLAFIEISVLSGAAV 485
GY SYL+W+E GFTE AV+PL LY QL LNW+W PIFFG + A +++ ++SGAA
Sbjct: 61 GYGSYLVWKELGGFTEKAVVPLGLYTGQLALNWAWPPIFFGARQMGWALVDLLLVSGAAA 120
Query: 486 ATTLSFGSVNKTAGLLLVPYLAWLGYASSLSYYIWKNN 599
ATT+++ V+ A LL PYLAWL +A++L+Y +W++N
Sbjct: 121 ATTVAWYQVSPLAARLLYPYLAWLAFATTLNYCVWRDN 158
>AY383615-1|AAQ75703.1| 169|Homo sapiens benzodiazapine receptor
(peripheral) protein.
Length = 169
Score = 173 bits (420), Expect = 6e-43
Identities = 76/158 (48%), Positives = 106/158 (67%)
Frame = +3
Query: 126 PALGSIILPNVGGWANGLFFAGQIRKDNSEKSWYDELKKPSWTPPKWVFGPAWTVLYSSM 305
PA+G + P++G + F G+ + WY L+KPSW PP WV GP W LYS+M
Sbjct: 7 PAMGFTLAPSLGCFVGSRFVHGEGLR------WYAGLQKPSWHPPHWVLGPVWGTLYSAM 60
Query: 306 GYASYLIWEECDGFTEDAVLPLTLYGVQLLLNWSWTPIFFGLKDFKLAFIEISVLSGAAV 485
GY SYL+W+E GFTE AV+PL LY QL LNW+W PIFFG + A +++ ++SGAA
Sbjct: 61 GYGSYLVWKELGGFTEKAVVPLGLYTGQLALNWAWPPIFFGARQMGWALVDLLLVSGAAA 120
Query: 486 ATTLSFGSVNKTAGLLLVPYLAWLGYASSLSYYIWKNN 599
ATT+++ V+ A LL PYLAWL +A++L+Y +W++N
Sbjct: 121 ATTVAWYQVSPLAARLLYPYLAWLAFATTLNYCVWRDN 158
>Z82214-1|CAB55884.1| 169|Homo sapiens translocator protein (18kDa)
protein.
Length = 169
Score = 171 bits (416), Expect = 2e-42
Identities = 75/158 (47%), Positives = 105/158 (66%)
Frame = +3
Query: 126 PALGSIILPNVGGWANGLFFAGQIRKDNSEKSWYDELKKPSWTPPKWVFGPAWTVLYSSM 305
PA+G + P++G + F G+ + WY L+KPSW PP WV GP W LYS+M
Sbjct: 7 PAMGFTLAPSLGCFVGSRFVHGEGLR------WYAGLQKPSWHPPHWVLGPVWGTLYSAM 60
Query: 306 GYASYLIWEECDGFTEDAVLPLTLYGVQLLLNWSWTPIFFGLKDFKLAFIEISVLSGAAV 485
GY SYL+W+E GFTE AV+PL LY QL LNW+W PIFFG + A +++ ++SGAA
Sbjct: 61 GYGSYLVWKELGGFTEKAVVPLGLYTGQLALNWAWPPIFFGARQMGWALVDLLLVSGAAA 120
Query: 486 ATTLSFGSVNKTAGLLLVPYLAWLGYASSLSYYIWKNN 599
ATT+++ V+ A LL PYLAWL + ++L+Y +W++N
Sbjct: 121 ATTVAWYQVSPLAARLLYPYLAWLAFTTTLNYCVWRDN 158
>U12421-1|AAA83252.1| 169|Homo sapiens mitochondrial benzodiazepine
receptor protein.
Length = 169
Score = 171 bits (416), Expect = 2e-42
Identities = 75/158 (47%), Positives = 105/158 (66%)
Frame = +3
Query: 126 PALGSIILPNVGGWANGLFFAGQIRKDNSEKSWYDELKKPSWTPPKWVFGPAWTVLYSSM 305
PA+G + P++G + F G+ + WY L+KPSW PP WV GP W LYS+M
Sbjct: 7 PAMGFTLAPSLGCFVGSRFVHGEGLR------WYAGLQKPSWHPPHWVLGPVWGTLYSAM 60
Query: 306 GYASYLIWEECDGFTEDAVLPLTLYGVQLLLNWSWTPIFFGLKDFKLAFIEISVLSGAAV 485
GY SYL+W+E GFTE AV+PL LY QL LNW+W PIFFG + A +++ ++SGAA
Sbjct: 61 GYGSYLVWKELGGFTEKAVVPLGLYTGQLALNWAWPPIFFGARQMGWALVDLLLVSGAAA 120
Query: 486 ATTLSFGSVNKTAGLLLVPYLAWLGYASSLSYYIWKNN 599
ATT+++ V+ A LL PYLAWL + ++L+Y +W++N
Sbjct: 121 ATTVAWYQVSPLAARLLYPYLAWLAFTTTLNYCVWRDN 158
>CR456409-1|CAG30295.1| 169|Homo sapiens BZRP protein.
Length = 169
Score = 171 bits (416), Expect = 2e-42
Identities = 75/158 (47%), Positives = 105/158 (66%)
Frame = +3
Query: 126 PALGSIILPNVGGWANGLFFAGQIRKDNSEKSWYDELKKPSWTPPKWVFGPAWTVLYSSM 305
PA+G + P++G + F G+ + WY L+KPSW PP WV GP W LYS+M
Sbjct: 7 PAMGFTLAPSLGCFVGSRFVHGEGLR------WYAGLQKPSWHPPHWVLGPVWGTLYSAM 60
Query: 306 GYASYLIWEECDGFTEDAVLPLTLYGVQLLLNWSWTPIFFGLKDFKLAFIEISVLSGAAV 485
GY SYL+W+E GFTE AV+PL LY QL LNW+W PIFFG + A +++ ++SGAA
Sbjct: 61 GYGSYLVWKELGGFTEKAVVPLGLYTGQLALNWAWPPIFFGARQMGWALVDLLLVSGAAA 120
Query: 486 ATTLSFGSVNKTAGLLLVPYLAWLGYASSLSYYIWKNN 599
ATT+++ V+ A LL PYLAWL + ++L+Y +W++N
Sbjct: 121 ATTVAWYQVSPLAARLLYPYLAWLAFTTTLNYCVWRDN 158
>AY998017-1|AAY45787.1| 169|Homo sapiens peripheral benzodiazepine
receptor protein.
Length = 169
Score = 171 bits (416), Expect = 2e-42
Identities = 75/158 (47%), Positives = 105/158 (66%)
Frame = +3
Query: 126 PALGSIILPNVGGWANGLFFAGQIRKDNSEKSWYDELKKPSWTPPKWVFGPAWTVLYSSM 305
PA+G + P++G + F G+ + WY L+KPSW PP WV GP W LYS+M
Sbjct: 7 PAMGFTLAPSLGCFVGSRFVHGEGLR------WYAGLQKPSWHPPHWVLGPVWGTLYSAM 60
Query: 306 GYASYLIWEECDGFTEDAVLPLTLYGVQLLLNWSWTPIFFGLKDFKLAFIEISVLSGAAV 485
GY SYL+W+E GFTE AV+PL LY QL LNW+W PIFFG + A +++ ++SGAA
Sbjct: 61 GYGSYLVWKELGGFTEKAVVPLGLYTGQLALNWAWPPIFFGARQMGWALVDLLLVSGAAA 120
Query: 486 ATTLSFGSVNKTAGLLLVPYLAWLGYASSLSYYIWKNN 599
ATT+++ V+ A LL PYLAWL + ++L+Y +W++N
Sbjct: 121 ATTVAWYQVSPLAARLLYPYLAWLAFTTTLNYCVWRDN 158
>AF075590-1|AAC31173.1| 143|Homo sapiens peripheral-type
benzodiazepine receptor protein.
Length = 143
Score = 165 bits (402), Expect = 1e-40
Identities = 68/126 (53%), Positives = 91/126 (72%)
Frame = +3
Query: 222 WYDELKKPSWTPPKWVFGPAWTVLYSSMGYASYLIWEECDGFTEDAVLPLTLYGVQLLLN 401
WY L+KPSW PP WV GP W LYS+MGY SYL+W+E GFTE AV+PL LY QL LN
Sbjct: 7 WYAGLQKPSWHPPHWVLGPVWGTLYSAMGYGSYLVWKELGGFTEKAVVPLGLYTGQLALN 66
Query: 402 WSWTPIFFGLKDFKLAFIEISVLSGAAVATTLSFGSVNKTAGLLLVPYLAWLGYASSLSY 581
W+W PIFFG + A +++ ++SGAA ATT+++ V+ A LL PYLAWL + ++L+Y
Sbjct: 67 WAWPPIFFGARQMGWALVDLLLVSGAAAATTVAWYQVSPLAARLLYPYLAWLAFTTTLNY 126
Query: 582 YIWKNN 599
+W++N
Sbjct: 127 CVWRDN 132
>AF075589-1|AAC31172.1| 143|Homo sapiens peripheral-type
benzodiazepine receptor protein.
Length = 143
Score = 165 bits (402), Expect = 1e-40
Identities = 68/126 (53%), Positives = 91/126 (72%)
Frame = +3
Query: 222 WYDELKKPSWTPPKWVFGPAWTVLYSSMGYASYLIWEECDGFTEDAVLPLTLYGVQLLLN 401
WY L+KPSW PP WV GP W LYS+MGY SYL+W+E GFTE AV+PL LY QL LN
Sbjct: 7 WYAGLQKPSWHPPHWVLGPVWGTLYSAMGYGSYLVWKELGGFTEKAVVPLGLYTGQLALN 66
Query: 402 WSWTPIFFGLKDFKLAFIEISVLSGAAVATTLSFGSVNKTAGLLLVPYLAWLGYASSLSY 581
W+W PIFFG + A +++ ++SGAA ATT+++ V+ A LL PYLAWL + ++L+Y
Sbjct: 67 WAWPPIFFGARQMGWALVDLLLVSGAAAATTVAWYQVSPLAARLLYPYLAWLAFTTTLNY 126
Query: 582 YIWKNN 599
+W++N
Sbjct: 127 CVWRDN 132
>L21954-1|AAA18228.1| 169|Homo sapiens peripheral benzodiazepine
receptor protein.
Length = 169
Score = 131 bits (317), Expect = 2e-30
Identities = 67/162 (41%), Positives = 97/162 (59%), Gaps = 4/162 (2%)
Frame = +3
Query: 126 PALGSIILPNVGGWANGLFFAGQIRKDNSEKSWYDELKKPSWTPPKWVFGPAWTVLYSSM 305
PA+G + P++G + F G+ + WY L+KPSW PP WV GP W LYS+M
Sbjct: 7 PAMGFTLAPSLGCFVGSRFVHGEGLR------WYAGLQKPSWHPPHWVLGPVWGTLYSAM 60
Query: 306 GYASYLIWEECDGFTEDAV-LPLTLY---GVQLLLNWSWTPIFFGLKDFKLAFIEISVLS 473
GY SYL+W+E GFTE AV P L+ G +L P G + A +++ ++S
Sbjct: 61 GYGSYLVWKELGGFTEKAVGSPGPLHWAAGPEL----GMAPHLLGARQMGWALVDLLLVS 116
Query: 474 GAAVATTLSFGSVNKTAGLLLVPYLAWLGYASSLSYYIWKNN 599
GAA ATT+++ V+ A LL PYLAWL +A++L+Y +W++N
Sbjct: 117 GAAAATTVAWYQVSPLAARLLYPYLAWLAFATTLNYCVWRDN 158
>AL031778-2|CAB44739.1| 170|Homo sapiens protein ( Human DNA
sequence from clone RP1-34B21 on chromosome 6p12.1-21.1.
).
Length = 170
Score = 103 bits (248), Expect = 4e-22
Identities = 52/131 (39%), Positives = 79/131 (60%), Gaps = 1/131 (0%)
Frame = +3
Query: 222 WYDELKKPSWTPPKWVFGPAWTVLYSSMGYASYLIWEECDG-FTEDAVLPLTLYGVQLLL 398
W + + SW P V T +YS +GYASYL+W++ G LPL LY VQL +
Sbjct: 30 WCEGPRMLSWCPFYKVLLLVQTAIYSVVGYASYLVWKDLGGGLGWPLALPLGLYAVQLTI 89
Query: 399 NWSWTPIFFGLKDFKLAFIEISVLSGAAVATTLSFGSVNKTAGLLLVPYLAWLGYASSLS 578
+W+ +FF + + LA + + +L G V+T L + +NK A LLL+PYLAWL S+L+
Sbjct: 90 SWTVLVLFFTVHNPGLALLHLLLLYGLVVSTALIWHPINKLAALLLLPYLAWLTVTSALT 149
Query: 579 YYIWKNNPKPV 611
Y++W+++ PV
Sbjct: 150 YHLWRDSLCPV 160
>AB076381-1|BAC00959.1| 61|Homo sapiens Peripheral-type
Benzodiazepine Receptor protein.
Length = 61
Score = 58.8 bits (136), Expect = 2e-08
Identities = 26/61 (42%), Positives = 35/61 (57%)
Frame = +3
Query: 126 PALGSIILPNVGGWANGLFFAGQIRKDNSEKSWYDELKKPSWTPPKWVFGPAWTVLYSSM 305
PA+G + P++G + F G+ + WY L+KPSW PP WV GP W LYS+M
Sbjct: 7 PAMGFTLAPSLGCFVGSRFVHGEGLR------WYTGLQKPSWHPPHWVLGPVWGTLYSAM 60
Query: 306 G 308
G
Sbjct: 61 G 61
>AB076380-1|BAC00958.1| 62|Homo sapiens Peripheral-type
Benzodiazepine Receptor protein.
Length = 62
Score = 58.0 bits (134), Expect = 3e-08
Identities = 23/51 (45%), Positives = 39/51 (76%)
Frame = +3
Query: 447 AFIEISVLSGAAVATTLSFGSVNKTAGLLLVPYLAWLGYASSLSYYIWKNN 599
A +++ ++SGAA ATT+++ V+ A LL PYLAWL +A++L+Y +W++N
Sbjct: 1 ALVDLLLVSGAAAATTVAWYQVSPLAARLLYPYLAWLAFATTLNYCVWRDN 51
>AB076379-1|BAC00957.1| 62|Homo sapiens Peripheral-type
Benzodiazepine Receptor protein.
Length = 62
Score = 58.0 bits (134), Expect = 3e-08
Identities = 23/51 (45%), Positives = 39/51 (76%)
Frame = +3
Query: 447 AFIEISVLSGAAVATTLSFGSVNKTAGLLLVPYLAWLGYASSLSYYIWKNN 599
A +++ ++SGAA ATT+++ V+ A LL PYLAWL +A++L+Y +W++N
Sbjct: 1 ALVDLLLVSGAAAATTVAWYQVSPLAARLLYPYLAWLAFATTLNYCVWRDN 51
>AB209076-1|BAD92313.1| 234|Homo sapiens Kv channel interacting
protein 3 variant protein.
Length = 234
Score = 31.9 bits (69), Expect = 2.2
Identities = 22/72 (30%), Positives = 32/72 (44%), Gaps = 1/72 (1%)
Frame = +3
Query: 90 YLYSRDFVMANWPALGSIILPNVGGWANGLFFAGQIRKDNSEKSWYDELK-KPSWTPPKW 266
++ S +M+ LGS + GWA GL + +D +S +DE + PS W
Sbjct: 58 WVSSTGIIMSPTNNLGSQLQTTETGWAPGLRKFTETPEDQRTRSEWDEARAPPSALGDAW 117
Query: 267 VFGPAWTVLYSS 302
GP W SS
Sbjct: 118 HPGPLWQERSSS 129
>AL121747-11|CAO03633.1| 340|Homo sapiens RanBP-type and C3HC4-type
zinc finger containing 1 protein.
Length = 340
Score = 29.9 bits (64), Expect = 8.8
Identities = 19/53 (35%), Positives = 22/53 (41%), Gaps = 6/53 (11%)
Frame = +1
Query: 445 WHSLRSQCCPGQQWQRHCHSAVSIRQP------VCYSYHTWLGSDMPAPFLTT 585
W S S+C G W + S S R P C S H W GS AP T+
Sbjct: 39 WASRTSRCSRGALWSQAPQSPGSPRNPDGGSQMQCLSPHRWAGSAPGAPSSTS 91
>AK126962-1|BAC86765.1| 143|Homo sapiens protein ( Homo sapiens
cDNA FLJ45015 fis, clone BRAWH3014639. ).
Length = 143
Score = 29.9 bits (64), Expect = 8.8
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +1
Query: 448 HSLRSQCCPGQQWQRHCHSAVSIRQPVCYSYH 543
H+L+S CP W C S++ RQ V ++ H
Sbjct: 36 HALQSSSCPASAWTAQCPSSLQ-RQGVSWALH 66
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 114,883,140
Number of Sequences: 237096
Number of extensions: 2756867
Number of successful extensions: 13233
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 12996
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13226
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7783251346
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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