Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc12m16
         (733 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014297-619|AAF54013.2|  365|Drosophila melanogaster CG1287-PA ...   149   5e-36
AY075204-1|AAL68072.1|  365|Drosophila melanogaster AT14090p pro...   148   9e-36
BT009945-1|AAQ22414.1|  341|Drosophila melanogaster RH72958p pro...   137   1e-32
AE014298-1546|AAF47994.1|  341|Drosophila melanogaster CG2076-PA...   137   1e-32
BT023016-1|AAY55432.1|  176|Drosophila melanogaster IP04080p pro...    31   1.2  
AE014296-3148|AAF49161.1|  162|Drosophila melanogaster CG14095-P...    31   2.1  
AE014134-756|AAN10358.4| 23015|Drosophila melanogaster CG33196-P...    29   6.5  

>AE014297-619|AAF54013.2|  365|Drosophila melanogaster CG1287-PA
           protein.
          Length = 365

 Score =  149 bits (360), Expect = 5e-36
 Identities = 74/180 (41%), Positives = 112/180 (62%), Gaps = 7/180 (3%)
 Frame = +2

Query: 215 KSPVPQNFVPRNYVVRNYAREPRTR----VATRSQ-PTLRERLMAPAGPNAFXXXXXXXX 379
           KS +P+  + +   +R Y+RE R R    + +R++ P+L+ER+M P   NA+        
Sbjct: 48  KSVIPKRNM-QELGMRKYSRESRDRDRSQLESRTRGPSLKERMMGPPSENAYSMGKGAAA 106

Query: 380 XXXXXXXXXXCYYGSGV--KPGTLQESHLWPQYVKERIKTTYGYIAGSLVLTAGSAVAVF 553
                     CYYG G+  +P     S +WPQYV++RI  TY Y   S  +TA SAVA F
Sbjct: 107 GAALMGLVGLCYYGLGLANQPSIYDHSMVWPQYVRDRIHATYAYFGASCGVTAASAVAFF 166

Query: 554 RTPALLNLVARNGWMSIIVTLGLMIGSGMVVRGMEYTPGFGAKQLAWMAHTGIMGAVIAP 733
           ++ A++ L+ R+GW++ +VTLGL++ SG + +G+EY PGFGAKQLAW+ H  ++GAV+AP
Sbjct: 167 QSDAMMALMTRSGWVASLVTLGLVMLSGSIAQGLEYQPGFGAKQLAWLVHCAVLGAVLAP 226


>AY075204-1|AAL68072.1|  365|Drosophila melanogaster AT14090p
           protein.
          Length = 365

 Score =  148 bits (358), Expect = 9e-36
 Identities = 73/180 (40%), Positives = 113/180 (62%), Gaps = 7/180 (3%)
 Frame = +2

Query: 215 KSPVPQNFVPRNYVVRNYAREPR----TRVATRSQ-PTLRERLMAPAGPNAFXXXXXXXX 379
           KS +P+  + +   +R Y+RE R    +++ +R++ P+L+ER+M P   NA+        
Sbjct: 48  KSVIPKRNM-QELGMRKYSRESRDHDRSQLESRTRGPSLKERMMGPPSENAYSMGKGAAA 106

Query: 380 XXXXXXXXXXCYYGSGV--KPGTLQESHLWPQYVKERIKTTYGYIAGSLVLTAGSAVAVF 553
                     CYYG G+  +P     S +WPQYV++RI  TY Y   S  +TA SAVA F
Sbjct: 107 GAALMGLVGLCYYGLGLANQPSIYDNSMVWPQYVRDRIHATYAYFGASCGVTAASAVAFF 166

Query: 554 RTPALLNLVARNGWMSIIVTLGLMIGSGMVVRGMEYTPGFGAKQLAWMAHTGIMGAVIAP 733
           ++ A++ L+ R+GW++ +VTLGL++ SG + +G+EY PGFGAKQLAW+ H  ++GAV+AP
Sbjct: 167 QSDAMMALMTRSGWVASLVTLGLVMLSGSIAQGLEYQPGFGAKQLAWLVHCAVLGAVLAP 226


>BT009945-1|AAQ22414.1|  341|Drosophila melanogaster RH72958p
           protein.
          Length = 341

 Score =  137 bits (332), Expect = 1e-32
 Identities = 73/164 (44%), Positives = 95/164 (57%), Gaps = 5/164 (3%)
 Frame = +2

Query: 257 VRNYAREP-RTR--VATRSQPTLRERLMAPAGPNAFXXXXXXXXXXXXXXXXXXCYYGSG 427
           VR YAR   RTR  V     P+L+E+LM P   NA+                  CYYG G
Sbjct: 40  VRTYARRVVRTREPVEEMRAPSLKEKLMGPPSANAYSMGKGAAAGAAAVGLGALCYYGVG 99

Query: 428 VKPGT--LQESHLWPQYVKERIKTTYGYIAGSLVLTAGSAVAVFRTPALLNLVARNGWMS 601
           +   T     + +WPQ+V++RI++TY +  GS VLTA +A A FR+  LL L +R G ++
Sbjct: 100 LGKQTSIADNAIMWPQFVRDRIQSTYAFFGGSCVLTAAAAAATFRSHRLLELASRGGILA 159

Query: 602 IIVTLGLMIGSGMVVRGMEYTPGFGAKQLAWMAHTGIMGAVIAP 733
            I +L L+IGSG V R +EY PG GAK LAW  H  I+GAVIAP
Sbjct: 160 TIASLALVIGSGAVARSIEYQPGLGAKHLAWAVHCAILGAVIAP 203


>AE014298-1546|AAF47994.1|  341|Drosophila melanogaster CG2076-PA
           protein.
          Length = 341

 Score =  137 bits (332), Expect = 1e-32
 Identities = 73/164 (44%), Positives = 95/164 (57%), Gaps = 5/164 (3%)
 Frame = +2

Query: 257 VRNYAREP-RTR--VATRSQPTLRERLMAPAGPNAFXXXXXXXXXXXXXXXXXXCYYGSG 427
           VR YAR   RTR  V     P+L+E+LM P   NA+                  CYYG G
Sbjct: 40  VRTYARRVVRTREPVEEMRAPSLKEKLMGPPSANAYSMGKGAAAGAAAVGLGALCYYGVG 99

Query: 428 VKPGT--LQESHLWPQYVKERIKTTYGYIAGSLVLTAGSAVAVFRTPALLNLVARNGWMS 601
           +   T     + +WPQ+V++RI++TY +  GS VLTA +A A FR+  LL L +R G ++
Sbjct: 100 LGKQTSIADNAIMWPQFVRDRIQSTYAFFGGSCVLTAAAAAATFRSHRLLELASRGGILA 159

Query: 602 IIVTLGLMIGSGMVVRGMEYTPGFGAKQLAWMAHTGIMGAVIAP 733
            I +L L+IGSG V R +EY PG GAK LAW  H  I+GAVIAP
Sbjct: 160 TIASLALVIGSGAVARSIEYQPGLGAKHLAWAVHCAILGAVIAP 203


>BT023016-1|AAY55432.1|  176|Drosophila melanogaster IP04080p
           protein.
          Length = 176

 Score = 31.5 bits (68), Expect = 1.2
 Identities = 13/33 (39%), Positives = 20/33 (60%)
 Frame = -2

Query: 720 APIIPVCAIHANCLAPNPGVYSIPLTTMPEPII 622
           A  + +CA+ A C+A  PG+   PL  +P P+I
Sbjct: 13  AKAVVICALIA-CVAAKPGLLHTPLAALPAPVI 44


>AE014296-3148|AAF49161.1|  162|Drosophila melanogaster CG14095-PA
           protein.
          Length = 162

 Score = 30.7 bits (66), Expect = 2.1
 Identities = 12/30 (40%), Positives = 19/30 (63%)
 Frame = -2

Query: 711 IPVCAIHANCLAPNPGVYSIPLTTMPEPII 622
           + +CA+ A C+A  PG+   PL  +P P+I
Sbjct: 6   VVICALIA-CVAAKPGLLHTPLAALPAPVI 34


>AE014134-756|AAN10358.4| 23015|Drosophila melanogaster CG33196-PB
             protein.
          Length = 23015

 Score = 29.1 bits (62), Expect = 6.5
 Identities = 14/53 (26%), Positives = 21/53 (39%)
 Frame = -1

Query: 679   SPKSRCVLHSSYYHARTNHQTQCDNNGHPSISCYQI*KCGCSENSNCTTSSQH 521
             +P+ RC+  S          T C +N    I+      C C  N+ CT  + H
Sbjct: 21710 NPQERCLPPSDVILVGCKSSTDCPSN-EACINTQCASPCNCGPNAECTVKNHH 21761



 Score = 28.7 bits (61), Expect = 8.6
 Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 5/47 (10%)
 Frame = -1

Query: 370  TLAQAECIWSSRCHESLPKCGL*ACSDPC-----SRFSCIISDHIVS 245
            T  + ECI+SS C  SL  C    C DPC     +   C + +H+ S
Sbjct: 9667 TGCRPECIYSSECPSSL-ACIKQHCRDPCTAACGANAECTVVNHLPS 9712


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,596,748
Number of Sequences: 53049
Number of extensions: 786034
Number of successful extensions: 2421
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2187
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2413
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3293648160
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)