Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc12m11
         (665 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ437579-1|ABD96049.1|  575|Anopheles gambiae short neuropeptide...    25   2.8  
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            23   6.5  
AJ010194-1|CAA09033.1|  684|Anopheles gambiae prophenoloxidase p...    23   6.5  
CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.          23   8.7  

>DQ437579-1|ABD96049.1|  575|Anopheles gambiae short neuropeptide F
           receptor protein.
          Length = 575

 Score = 24.6 bits (51), Expect = 2.8
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = +2

Query: 131 RGRAARLGASEGAGGARR 184
           RGRA  +G + GAGG  R
Sbjct: 402 RGRAGTVGGNRGAGGGWR 419


>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 23.4 bits (48), Expect = 6.5
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = -3

Query: 549 VCETCGRCRCEQCARPRPLPSRW 481
           VC +   C  E+ A+ R LPSRW
Sbjct: 553 VCASWPLCG-EKSAKKRKLPSRW 574


>AJ010194-1|CAA09033.1|  684|Anopheles gambiae prophenoloxidase
           protein.
          Length = 684

 Score = 23.4 bits (48), Expect = 6.5
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = -2

Query: 466 SMQRGSMR*LRVVHVLREGAVLPLRERR 383
           SM+RG++R      V   G VLP R++R
Sbjct: 498 SMRRGTVRLFLGPKVNDRGQVLPFRDQR 525


>CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.
          Length = 659

 Score = 23.0 bits (47), Expect = 8.7
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -3

Query: 45  VARGRRRTCAPRS 7
           +AR RRR C PR+
Sbjct: 498 IARARRRRCRPRA 510


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 517,746
Number of Sequences: 2352
Number of extensions: 8588
Number of successful extensions: 37
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 66486645
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)