Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc12m04
         (372 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   2.3  
EF127810-1|ABL67947.1|  311|Tribolium castaneum nicotinic acetyl...    21   3.1  
EF127809-1|ABL67946.1|  311|Tribolium castaneum nicotinic acetyl...    21   3.1  
EF127808-1|ABL67945.1|  311|Tribolium castaneum nicotinic acetyl...    21   3.1  
EF127807-1|ABL67944.1|  311|Tribolium castaneum nicotinic acetyl...    21   3.1  
EF127806-1|ABL67943.1|  311|Tribolium castaneum nicotinic acetyl...    21   3.1  
AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein p...    21   3.1  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   5.4  
AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.      21   5.4  
AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esteras...    20   7.1  
AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esteras...    20   7.1  
AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.      20   7.1  
AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    20   9.4  
AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein p...    20   9.4  
AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein p...    20   9.4  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    20   9.4  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.8 bits (44), Expect = 2.3
 Identities = 8/27 (29%), Positives = 13/27 (48%)
 Frame = -2

Query: 188 CILLHYQQSSFFACSYPVTTISRIFCL 108
           CI   Y     F C++ + T+  +F L
Sbjct: 257 CIYYFYYMHLLFCCAFIIFTMHLLFLL 283


>EF127810-1|ABL67947.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           5 protein.
          Length = 311

 Score = 21.4 bits (43), Expect = 3.1
 Identities = 6/11 (54%), Positives = 8/11 (72%)
 Frame = -1

Query: 207 HHQTKDLHSSP 175
           HH+T D+H  P
Sbjct: 299 HHRTADIHEMP 309


>EF127809-1|ABL67946.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           4 protein.
          Length = 311

 Score = 21.4 bits (43), Expect = 3.1
 Identities = 6/11 (54%), Positives = 8/11 (72%)
 Frame = -1

Query: 207 HHQTKDLHSSP 175
           HH+T D+H  P
Sbjct: 299 HHRTADIHEMP 309


>EF127808-1|ABL67945.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           3 protein.
          Length = 311

 Score = 21.4 bits (43), Expect = 3.1
 Identities = 6/11 (54%), Positives = 8/11 (72%)
 Frame = -1

Query: 207 HHQTKDLHSSP 175
           HH+T D+H  P
Sbjct: 299 HHRTADIHEMP 309


>EF127807-1|ABL67944.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           2 protein.
          Length = 311

 Score = 21.4 bits (43), Expect = 3.1
 Identities = 6/11 (54%), Positives = 8/11 (72%)
 Frame = -1

Query: 207 HHQTKDLHSSP 175
           HH+T D+H  P
Sbjct: 299 HHRTADIHEMP 309


>EF127806-1|ABL67943.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           1 protein.
          Length = 311

 Score = 21.4 bits (43), Expect = 3.1
 Identities = 6/11 (54%), Positives = 8/11 (72%)
 Frame = -1

Query: 207 HHQTKDLHSSP 175
           HH+T D+H  P
Sbjct: 299 HHRTADIHEMP 309


>AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein
           protein.
          Length = 287

 Score = 21.4 bits (43), Expect = 3.1
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = -1

Query: 252 ITKL*HHGILQPSHQHHQ 199
           I  L H+G +Q    HHQ
Sbjct: 226 IDNLFHNGFMQEQSTHHQ 243


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 20.6 bits (41), Expect = 5.4
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = -3

Query: 265 YSLFYYKTLASRYPPAQ 215
           + LFYY +  + Y P Q
Sbjct: 103 FDLFYYPSRQTLYTPVQ 119


>AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.
          Length = 517

 Score = 20.6 bits (41), Expect = 5.4
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = +2

Query: 35  FFTPVNFENS*SHFGKLHGPMQFLRGRIF 121
           ++   N EN+  +F  +H    FLR  IF
Sbjct: 357 YYEGPNSENNLDNFYLIHTDTYFLRDIIF 385


>AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esterase
           protein.
          Length = 515

 Score = 20.2 bits (40), Expect = 7.1
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = +2

Query: 50  NFENS*SHFGKLHGPMQFLRGRIF 121
           N EN+  +F  +H    FLR  IF
Sbjct: 360 NSENNLDNFYLIHTDTYFLRDIIF 383


>AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esterase
           protein.
          Length = 517

 Score = 20.2 bits (40), Expect = 7.1
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = +2

Query: 50  NFENS*SHFGKLHGPMQFLRGRIF 121
           N EN+  +F  +H    FLR  IF
Sbjct: 362 NSENNLDNFYLIHTDTYFLRDIIF 385


>AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.
          Length = 515

 Score = 20.2 bits (40), Expect = 7.1
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = +2

Query: 50  NFENS*SHFGKLHGPMQFLRGRIF 121
           N EN+  +F  +H    FLR  IF
Sbjct: 360 NSENNLDNFYLIHTDTYFLRDIIF 383


>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 19.8 bits (39), Expect = 9.4
 Identities = 6/12 (50%), Positives = 7/12 (58%)
 Frame = -1

Query: 237 HHGILQPSHQHH 202
           HH  +   HQHH
Sbjct: 118 HHEEVADGHQHH 129


>AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein
           protein.
          Length = 210

 Score = 19.8 bits (39), Expect = 9.4
 Identities = 6/12 (50%), Positives = 7/12 (58%)
 Frame = -1

Query: 237 HHGILQPSHQHH 202
           HH  +   HQHH
Sbjct: 118 HHEEVADGHQHH 129


>AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein
           protein.
          Length = 253

 Score = 19.8 bits (39), Expect = 9.4
 Identities = 6/12 (50%), Positives = 7/12 (58%)
 Frame = -1

Query: 237 HHGILQPSHQHH 202
           HH  +   HQHH
Sbjct: 118 HHEEVADGHQHH 129


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 19.8 bits (39), Expect = 9.4
 Identities = 9/23 (39%), Positives = 11/23 (47%)
 Frame = -1

Query: 267 HIHCFITKL*HHGILQPSHQHHQ 199
           HIH     + HH     S +HHQ
Sbjct: 329 HIHAQHHVVNHHVAANGSLKHHQ 351


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 65,845
Number of Sequences: 336
Number of extensions: 1206
Number of successful extensions: 16
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  7722305
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)