Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc12m04
         (372 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC041372-1|AAH41372.2|  296|Homo sapiens LOC283514 protein protein.    31   1.2  
U61520-1|AAB58468.1| 1259|Homo sapiens GT334 protein protein.          29   6.3  
U61500-1|AAC51826.1| 1259|Homo sapiens GT334 protein protein.          29   6.3  
U19252-1|AAC50134.1| 1190|Homo sapiens protein ( Human putative ...    29   6.3  
BC101728-1|AAI01729.1| 1259|Homo sapiens transmembrane protein 1...    29   6.3  
AB001523-1|BAA21099.1| 1259|Homo sapiens TMEM1 protein.                29   6.3  

>BC041372-1|AAH41372.2|  296|Homo sapiens LOC283514 protein protein.
          Length = 296

 Score = 31.1 bits (67), Expect = 1.2
 Identities = 16/47 (34%), Positives = 20/47 (42%), Gaps = 3/47 (6%)
 Frame = -1

Query: 267 HIHCFITK---L*HHGILQPSHQHHQTKDLHSSPLSAVFIFCMQLPC 136
           H HC       L HH    P H HHQ   LH++P++     C    C
Sbjct: 97  HHHCHHRHHHHLRHHA--HPHHLHHQEAGLHANPVTPCLCMCPLFSC 141


>U61520-1|AAB58468.1| 1259|Homo sapiens GT334 protein protein.
          Length = 1259

 Score = 28.7 bits (61), Expect = 6.3
 Identities = 13/39 (33%), Positives = 21/39 (53%), Gaps = 4/39 (10%)
 Frame = -1

Query: 234 HGILQPSHQHHQTKDLHSSPLSAVF----IFCMQLPCYN 130
           H I+ P H   Q +DLH  P +AV     + C+++  Y+
Sbjct: 576 HKIVLPMHSFAQLRDLHFDPSNAVVHVGGVLCVEITMYS 614


>U61500-1|AAC51826.1| 1259|Homo sapiens GT334 protein protein.
          Length = 1259

 Score = 28.7 bits (61), Expect = 6.3
 Identities = 13/39 (33%), Positives = 21/39 (53%), Gaps = 4/39 (10%)
 Frame = -1

Query: 234 HGILQPSHQHHQTKDLHSSPLSAVF----IFCMQLPCYN 130
           H I+ P H   Q +DLH  P +AV     + C+++  Y+
Sbjct: 576 HKIVLPMHSFAQLRDLHFDPSNAVVHVGGVLCVEITMYS 614


>U19252-1|AAC50134.1| 1190|Homo sapiens protein ( Human putative
           transmembrane protein mRNA, complete cds. ).
          Length = 1190

 Score = 28.7 bits (61), Expect = 6.3
 Identities = 13/39 (33%), Positives = 21/39 (53%), Gaps = 4/39 (10%)
 Frame = -1

Query: 234 HGILQPSHQHHQTKDLHSSPLSAVF----IFCMQLPCYN 130
           H I+ P H   Q +DLH  P +AV     + C+++  Y+
Sbjct: 576 HKIVLPMHSFAQLRDLHFDPSNAVVHVGGVLCVEITMYS 614


>BC101728-1|AAI01729.1| 1259|Homo sapiens transmembrane protein 1
           protein.
          Length = 1259

 Score = 28.7 bits (61), Expect = 6.3
 Identities = 13/39 (33%), Positives = 21/39 (53%), Gaps = 4/39 (10%)
 Frame = -1

Query: 234 HGILQPSHQHHQTKDLHSSPLSAVF----IFCMQLPCYN 130
           H I+ P H   Q +DLH  P +AV     + C+++  Y+
Sbjct: 576 HKIVLPMHSFAQLRDLHFDPSNAVVHVGGVLCVEITMYS 614


>AB001523-1|BAA21099.1| 1259|Homo sapiens TMEM1 protein.
          Length = 1259

 Score = 28.7 bits (61), Expect = 6.3
 Identities = 13/39 (33%), Positives = 21/39 (53%), Gaps = 4/39 (10%)
 Frame = -1

Query: 234 HGILQPSHQHHQTKDLHSSPLSAVF----IFCMQLPCYN 130
           H I+ P H   Q +DLH  P +AV     + C+++  Y+
Sbjct: 576 HKIVLPMHSFAQLRDLHFDPSNAVVHVGGVLCVEITMYS 614


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 39,287,075
Number of Sequences: 237096
Number of extensions: 737154
Number of successful extensions: 969
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 959
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 969
length of database: 76,859,062
effective HSP length: 81
effective length of database: 57,654,286
effective search space used: 2421480012
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)