Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc12m03
         (402 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory recept...    24   0.49 
AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.           21   4.5  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   4.5  
AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    21   4.5  
AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory recept...    21   4.5  
AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory recept...    20   7.9  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    20   7.9  

>AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory receptor
           candidate 20 protein.
          Length = 393

 Score = 24.2 bits (50), Expect = 0.49
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = -1

Query: 141 CLIIMVTFCICLYIYN 94
           CL + + +CIC YI++
Sbjct: 40  CLNLSINYCICGYIFS 55


>AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.
          Length = 253

 Score = 21.0 bits (42), Expect = 4.5
 Identities = 6/13 (46%), Positives = 10/13 (76%)
 Frame = -1

Query: 321 SNYNSNLYHQYNY 283
           S+Y + +YHQ N+
Sbjct: 217 SSYTNTIYHQENF 229


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.0 bits (42), Expect = 4.5
 Identities = 6/14 (42%), Positives = 13/14 (92%)
 Frame = +2

Query: 128 IIIKQQLNSLQVYI 169
           +++++ LNSLQ+Y+
Sbjct: 5   LVVEKFLNSLQIYL 18



 Score = 21.0 bits (42), Expect = 4.5
 Identities = 6/28 (21%), Positives = 14/28 (50%)
 Frame = -1

Query: 153  LFNCCLIIMVTFCICLYIYNNTYRIIFK 70
            L NC  + +  FC+  +  +   +++ K
Sbjct: 1128 LLNCVYLFLCGFCVYEFASDERIKLVIK 1155


>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 21.0 bits (42), Expect = 4.5
 Identities = 10/16 (62%), Positives = 11/16 (68%)
 Frame = -1

Query: 153 LFNCCLIIMVTFCICL 106
           LFNC LIIM   C C+
Sbjct: 248 LFNCTLIIM---CDCV 260


>AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory receptor
           candidate 3 protein.
          Length = 398

 Score = 21.0 bits (42), Expect = 4.5
 Identities = 6/14 (42%), Positives = 13/14 (92%)
 Frame = +2

Query: 128 IIIKQQLNSLQVYI 169
           +++++ LNSLQ+Y+
Sbjct: 23  LVVEKFLNSLQIYL 36


>AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory receptor
           candidate 52 protein.
          Length = 360

 Score = 20.2 bits (40), Expect = 7.9
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = -3

Query: 220 IFNLSLILTKTTLVLRIYVNLKTIQ 146
           I+ +   LTK  L  ++  NLK +Q
Sbjct: 80  IYTVLTALTKKPLWFKLLKNLKMVQ 104


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 20.2 bits (40), Expect = 7.9
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = -3

Query: 220 IFNLSLILTKTTLVLRIYVNLKTIQ 146
           I+ +   LTK  L  ++  NLK +Q
Sbjct: 80  IYTVLTALTKKPLWFKLLKNLKMVQ 104


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 79,729
Number of Sequences: 336
Number of extensions: 1474
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  8646818
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)