Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc12k05
         (271 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_08_0925 + 21604871-21605021,21605562-21605881,21606899-216078...    29   0.51 
03_01_0527 + 3960982-3961290,3961371-3961464,3961898-3962084,396...    26   3.6  
09_04_0493 - 18046553-18046990,18047061-18047180,18047290-180474...    26   4.7  
07_03_0887 - 22299783-22300913,22301241-22301569,22301958-22302090     26   4.7  
03_05_0345 + 23325842-23325964,23326384-23326828,23326965-233271...    25   6.3  
10_02_0167 - 6100676-6102111,6102174-6102708,6102967-6103975,610...    25   8.3  
07_01_0781 - 6051139-6052305                                           25   8.3  

>10_08_0925 +
           21604871-21605021,21605562-21605881,21606899-21607897,
           21608085-21608126,21608190-21608249,21608915-21608959
          Length = 538

 Score = 29.1 bits (62), Expect = 0.51
 Identities = 12/18 (66%), Positives = 12/18 (66%)
 Frame = -2

Query: 270 FFFKCWICLMLNFFSFFL 217
           FFF  WICLM  F  FFL
Sbjct: 460 FFFAGWICLMTVFVYFFL 477


>03_01_0527 +
           3960982-3961290,3961371-3961464,3961898-3962084,
           3962194-3962449,3962561-3962773,3962856-3962942,
           3963089-3963223,3963296-3963409,3963507-3963754,
           3963824-3963904,3963979-3964210,3964340-3964438,
           3964513-3964701,3964928-3965023
          Length = 779

 Score = 26.2 bits (55), Expect = 3.6
 Identities = 10/29 (34%), Positives = 13/29 (44%)
 Frame = +2

Query: 113 WYANCDRDIYSTSVTEI*KLNGCESPCVG 199
           W A CD  +   ++TE      CE  C G
Sbjct: 88  WLAGCDAGLSVVNITEFIGTKRCEQDCNG 116


>09_04_0493 -
           18046553-18046990,18047061-18047180,18047290-18047478,
           18047596-18047739,18048673-18048900,18049659-18049838,
           18050304-18050399,18051096-18051262,18051356-18051773,
           18052335-18052517,18053846-18053953,18054053-18054246,
           18054503-18054662
          Length = 874

 Score = 25.8 bits (54), Expect = 4.7
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = -1

Query: 106 VYRIPLGCSKFLRIIKTASAASKVCLR 26
           +Y I + C K L  +K+ASA   + LR
Sbjct: 648 IYNIMIECCKLLPCVKSASAVLSLMLR 674


>07_03_0887 - 22299783-22300913,22301241-22301569,22301958-22302090
          Length = 530

 Score = 25.8 bits (54), Expect = 4.7
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = -2

Query: 270 FFFKCWICLMLNFFSFFL 217
           FFF  W+ +M  F +FFL
Sbjct: 458 FFFGAWVVIMTLFVAFFL 475


>03_05_0345 +
           23325842-23325964,23326384-23326828,23326965-23327188,
           23327665-23328171,23328482-23328742
          Length = 519

 Score = 25.4 bits (53), Expect = 6.3
 Identities = 12/17 (70%), Positives = 12/17 (70%), Gaps = 1/17 (5%)
 Frame = -2

Query: 78  SSYELSKPQAPP-RRYV 31
           SSYEL  PQ PP R YV
Sbjct: 203 SSYELDDPQMPPGRNYV 219


>10_02_0167 - 6100676-6102111,6102174-6102708,6102967-6103975,
            6104006-6105036
          Length = 1336

 Score = 25.0 bits (52), Expect = 8.3
 Identities = 9/31 (29%), Positives = 21/31 (67%)
 Frame = +2

Query: 179  CESPCVGYH*IDLRKKEKKFNIKQIQHLKKK 271
            C +P +  +  ++RK EK+F+  +++H+ +K
Sbjct: 1162 CSNPELSKYLAEVRKLEKRFDGIEVRHVYRK 1192


>07_01_0781 - 6051139-6052305
          Length = 388

 Score = 25.0 bits (52), Expect = 8.3
 Identities = 10/22 (45%), Positives = 16/22 (72%)
 Frame = +3

Query: 24  YLKHTFEAALAVLIIRKNLEQP 89
           YL+H++E  L+ L+ RKN+  P
Sbjct: 297 YLEHSWEPILSRLVARKNILFP 318


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,612,213
Number of Sequences: 37544
Number of extensions: 107161
Number of successful extensions: 199
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 199
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 199
length of database: 14,793,348
effective HSP length: 68
effective length of database: 12,240,356
effective search space used: 257047476
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)