Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc12j01
         (674 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X56597-1|CAA39935.1|  321|Homo sapiens fibrillarin protein.           164   3e-40
CR457069-1|CAG33350.1|  321|Homo sapiens FBL protein.                 164   3e-40
BT020144-1|AAV38946.1|  321|Homo sapiens fibrillarin protein.         164   3e-40
BT006830-1|AAP35476.1|  321|Homo sapiens fibrillarin protein.         164   3e-40
BC019609-1|AAH19609.1|  260|Homo sapiens Unknown (protein for IM...   164   3e-40
BC019260-1|AAH19260.1|  321|Homo sapiens fibrillarin protein.         164   3e-40
BC015218-1|AAH15218.2|  260|Homo sapiens FBL protein protein.         164   3e-40
AC006950-1|AAD15623.1|  227|Homo sapiens FBRL_HUMAN [AA 1- 227] ...   164   3e-40
AC005393-3|AAC28913.1|  318|Homo sapiens FBRL_HUMAN protein.          164   3e-40
M59849-1|AAA52453.1|  321|Homo sapiens fibrillarin protein.           162   9e-40

>X56597-1|CAA39935.1|  321|Homo sapiens fibrillarin protein.
          Length = 321

 Score =  164 bits (398), Expect = 3e-40
 Identities = 73/93 (78%), Positives = 82/93 (88%)
 Frame = +1

Query: 394 VIIEPHRHPGVFIARGKEDALVTKNLVPGSEVYGEKRISVENEGDKVEYRVWNPFRSKLA 573
           V++EPHRH GVFI RGKEDALVTKNLVPG  VYGEKR+S+    DK+EYR WNPFRSKLA
Sbjct: 86  VMVEPHRHEGVFICRGKEDALVTKNLVPGESVYGEKRVSISEGDDKIEYRAWNPFRSKLA 145

Query: 574 AAIMGGVDAIHMAPGSRVLYLGAASGTTVSHVS 672
           AAI+GGVD IH+ PG++VLYLGAASGTTVSHVS
Sbjct: 146 AAILGGVDQIHIKPGAKVLYLGAASGTTVSHVS 178


>CR457069-1|CAG33350.1|  321|Homo sapiens FBL protein.
          Length = 321

 Score =  164 bits (398), Expect = 3e-40
 Identities = 73/93 (78%), Positives = 82/93 (88%)
 Frame = +1

Query: 394 VIIEPHRHPGVFIARGKEDALVTKNLVPGSEVYGEKRISVENEGDKVEYRVWNPFRSKLA 573
           V++EPHRH GVFI RGKEDALVTKNLVPG  VYGEKR+S+    DK+EYR WNPFRSKLA
Sbjct: 86  VMVEPHRHEGVFICRGKEDALVTKNLVPGESVYGEKRVSISEGDDKIEYRAWNPFRSKLA 145

Query: 574 AAIMGGVDAIHMAPGSRVLYLGAASGTTVSHVS 672
           AAI+GGVD IH+ PG++VLYLGAASGTTVSHVS
Sbjct: 146 AAILGGVDQIHIKPGAKVLYLGAASGTTVSHVS 178


>BT020144-1|AAV38946.1|  321|Homo sapiens fibrillarin protein.
          Length = 321

 Score =  164 bits (398), Expect = 3e-40
 Identities = 73/93 (78%), Positives = 82/93 (88%)
 Frame = +1

Query: 394 VIIEPHRHPGVFIARGKEDALVTKNLVPGSEVYGEKRISVENEGDKVEYRVWNPFRSKLA 573
           V++EPHRH GVFI RGKEDALVTKNLVPG  VYGEKR+S+    DK+EYR WNPFRSKLA
Sbjct: 86  VMVEPHRHEGVFICRGKEDALVTKNLVPGESVYGEKRVSISEGDDKIEYRAWNPFRSKLA 145

Query: 574 AAIMGGVDAIHMAPGSRVLYLGAASGTTVSHVS 672
           AAI+GGVD IH+ PG++VLYLGAASGTTVSHVS
Sbjct: 146 AAILGGVDQIHIKPGAKVLYLGAASGTTVSHVS 178


>BT006830-1|AAP35476.1|  321|Homo sapiens fibrillarin protein.
          Length = 321

 Score =  164 bits (398), Expect = 3e-40
 Identities = 73/93 (78%), Positives = 82/93 (88%)
 Frame = +1

Query: 394 VIIEPHRHPGVFIARGKEDALVTKNLVPGSEVYGEKRISVENEGDKVEYRVWNPFRSKLA 573
           V++EPHRH GVFI RGKEDALVTKNLVPG  VYGEKR+S+    DK+EYR WNPFRSKLA
Sbjct: 86  VMVEPHRHEGVFICRGKEDALVTKNLVPGESVYGEKRVSISEGDDKIEYRAWNPFRSKLA 145

Query: 574 AAIMGGVDAIHMAPGSRVLYLGAASGTTVSHVS 672
           AAI+GGVD IH+ PG++VLYLGAASGTTVSHVS
Sbjct: 146 AAILGGVDQIHIKPGAKVLYLGAASGTTVSHVS 178


>BC019609-1|AAH19609.1|  260|Homo sapiens Unknown (protein for
           IMAGE:4538098) protein.
          Length = 260

 Score =  164 bits (398), Expect = 3e-40
 Identities = 73/93 (78%), Positives = 82/93 (88%)
 Frame = +1

Query: 394 VIIEPHRHPGVFIARGKEDALVTKNLVPGSEVYGEKRISVENEGDKVEYRVWNPFRSKLA 573
           V++EPHRH GVFI RGKEDALVTKNLVPG  VYGEKR+S+    DK+EYR WNPFRSKLA
Sbjct: 25  VMVEPHRHEGVFICRGKEDALVTKNLVPGESVYGEKRVSISEGDDKIEYRAWNPFRSKLA 84

Query: 574 AAIMGGVDAIHMAPGSRVLYLGAASGTTVSHVS 672
           AAI+GGVD IH+ PG++VLYLGAASGTTVSHVS
Sbjct: 85  AAILGGVDQIHIKPGAKVLYLGAASGTTVSHVS 117


>BC019260-1|AAH19260.1|  321|Homo sapiens fibrillarin protein.
          Length = 321

 Score =  164 bits (398), Expect = 3e-40
 Identities = 73/93 (78%), Positives = 82/93 (88%)
 Frame = +1

Query: 394 VIIEPHRHPGVFIARGKEDALVTKNLVPGSEVYGEKRISVENEGDKVEYRVWNPFRSKLA 573
           V++EPHRH GVFI RGKEDALVTKNLVPG  VYGEKR+S+    DK+EYR WNPFRSKLA
Sbjct: 86  VMVEPHRHEGVFICRGKEDALVTKNLVPGESVYGEKRVSISEGDDKIEYRAWNPFRSKLA 145

Query: 574 AAIMGGVDAIHMAPGSRVLYLGAASGTTVSHVS 672
           AAI+GGVD IH+ PG++VLYLGAASGTTVSHVS
Sbjct: 146 AAILGGVDQIHIKPGAKVLYLGAASGTTVSHVS 178


>BC015218-1|AAH15218.2|  260|Homo sapiens FBL protein protein.
          Length = 260

 Score =  164 bits (398), Expect = 3e-40
 Identities = 73/93 (78%), Positives = 82/93 (88%)
 Frame = +1

Query: 394 VIIEPHRHPGVFIARGKEDALVTKNLVPGSEVYGEKRISVENEGDKVEYRVWNPFRSKLA 573
           V++EPHRH GVFI RGKEDALVTKNLVPG  VYGEKR+S+    DK+EYR WNPFRSKLA
Sbjct: 25  VMVEPHRHEGVFICRGKEDALVTKNLVPGESVYGEKRVSISEGDDKIEYRAWNPFRSKLA 84

Query: 574 AAIMGGVDAIHMAPGSRVLYLGAASGTTVSHVS 672
           AAI+GGVD IH+ PG++VLYLGAASGTTVSHVS
Sbjct: 85  AAILGGVDQIHIKPGAKVLYLGAASGTTVSHVS 117


>AC006950-1|AAD15623.1|  227|Homo sapiens FBRL_HUMAN [AA 1- 227]
           protein.
          Length = 227

 Score =  164 bits (398), Expect = 3e-40
 Identities = 73/93 (78%), Positives = 82/93 (88%)
 Frame = +1

Query: 394 VIIEPHRHPGVFIARGKEDALVTKNLVPGSEVYGEKRISVENEGDKVEYRVWNPFRSKLA 573
           V++EPHRH GVFI RGKEDALVTKNLVPG  VYGEKR+S+    DK+EYR WNPFRSKLA
Sbjct: 86  VMVEPHRHEGVFICRGKEDALVTKNLVPGESVYGEKRVSISEGDDKIEYRAWNPFRSKLA 145

Query: 574 AAIMGGVDAIHMAPGSRVLYLGAASGTTVSHVS 672
           AAI+GGVD IH+ PG++VLYLGAASGTTVSHVS
Sbjct: 146 AAILGGVDQIHIKPGAKVLYLGAASGTTVSHVS 178


>AC005393-3|AAC28913.1|  318|Homo sapiens FBRL_HUMAN protein.
          Length = 318

 Score =  164 bits (398), Expect = 3e-40
 Identities = 73/93 (78%), Positives = 82/93 (88%)
 Frame = +1

Query: 394 VIIEPHRHPGVFIARGKEDALVTKNLVPGSEVYGEKRISVENEGDKVEYRVWNPFRSKLA 573
           V++EPHRH GVFI RGKEDALVTKNLVPG  VYGEKR+S+    DK+EYR WNPFRSKLA
Sbjct: 83  VMVEPHRHEGVFICRGKEDALVTKNLVPGESVYGEKRVSISEGDDKIEYRAWNPFRSKLA 142

Query: 574 AAIMGGVDAIHMAPGSRVLYLGAASGTTVSHVS 672
           AAI+GGVD IH+ PG++VLYLGAASGTTVSHVS
Sbjct: 143 AAILGGVDQIHIKPGAKVLYLGAASGTTVSHVS 175


>M59849-1|AAA52453.1|  321|Homo sapiens fibrillarin protein.
          Length = 321

 Score =  162 bits (394), Expect = 9e-40
 Identities = 73/93 (78%), Positives = 81/93 (87%)
 Frame = +1

Query: 394 VIIEPHRHPGVFIARGKEDALVTKNLVPGSEVYGEKRISVENEGDKVEYRVWNPFRSKLA 573
           V++EPHRH GVFI RGKEDALVTKNLVPG  VYGEKR+S+    DK EYR WNPFRSKLA
Sbjct: 86  VMVEPHRHEGVFICRGKEDALVTKNLVPGESVYGEKRVSISEGDDKFEYRAWNPFRSKLA 145

Query: 574 AAIMGGVDAIHMAPGSRVLYLGAASGTTVSHVS 672
           AAI+GGVD IH+ PG++VLYLGAASGTTVSHVS
Sbjct: 146 AAILGGVDQIHIKPGAKVLYLGAASGTTVSHVS 178


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 69,196,261
Number of Sequences: 237096
Number of extensions: 1178039
Number of successful extensions: 2365
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2284
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2365
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7615267504
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)