Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc12j01
         (674 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE013599-3536|AAF46950.1|  344|Drosophila melanogaster CG9888-PA...   173   2e-43
BT001738-1|AAN71493.1|  331|Drosophila melanogaster RE72617p pro...   171   6e-43
BT023239-1|AAY55655.1|  349|Drosophila melanogaster IP10714p pro...   104   1e-22
AE014297-1590|AAF54870.1|  349|Drosophila melanogaster CG10909-P...   104   1e-22
X05285-1|CAA28903.1|  147|Drosophila melanogaster fibrillarin pr...    59   6e-09
BT015215-1|AAT94444.1|  290|Drosophila melanogaster RE45856p pro...    29   7.7  
BT012665-1|AAT08471.1|  308|Drosophila melanogaster RE62493p pro...    29   7.7  

>AE013599-3536|AAF46950.1|  344|Drosophila melanogaster CG9888-PA
           protein.
          Length = 344

 Score =  173 bits (421), Expect = 2e-43
 Identities = 79/93 (84%), Positives = 86/93 (92%)
 Frame = +1

Query: 394 VIIEPHRHPGVFIARGKEDALVTKNLVPGSEVYGEKRISVENEGDKVEYRVWNPFRSKLA 573
           V IEPHRH GVFIARGKEDALVT+N VPGSEVYGEKRISVE  G+K+EYRVWNPFRSKLA
Sbjct: 111 VTIEPHRHEGVFIARGKEDALVTRNFVPGSEVYGEKRISVETNGEKIEYRVWNPFRSKLA 170

Query: 574 AAIMGGVDAIHMAPGSRVLYLGAASGTTVSHVS 672
           AA++GGV+ IHM PGS+VLYLGAASGTTVSHVS
Sbjct: 171 AAVLGGVEQIHMPPGSKVLYLGAASGTTVSHVS 203


>BT001738-1|AAN71493.1|  331|Drosophila melanogaster RE72617p
           protein.
          Length = 331

 Score =  171 bits (417), Expect = 6e-43
 Identities = 79/93 (84%), Positives = 85/93 (91%)
 Frame = +1

Query: 394 VIIEPHRHPGVFIARGKEDALVTKNLVPGSEVYGEKRISVENEGDKVEYRVWNPFRSKLA 573
           V IEPHRH GVFIARGKEDALVT N VPGSEVYGEKRISVE  G+K+EYRVWNPFRSKLA
Sbjct: 98  VTIEPHRHEGVFIARGKEDALVTGNFVPGSEVYGEKRISVETNGEKIEYRVWNPFRSKLA 157

Query: 574 AAIMGGVDAIHMAPGSRVLYLGAASGTTVSHVS 672
           AA++GGV+ IHM PGS+VLYLGAASGTTVSHVS
Sbjct: 158 AAVLGGVEQIHMPPGSKVLYLGAASGTTVSHVS 190


>BT023239-1|AAY55655.1|  349|Drosophila melanogaster IP10714p
           protein.
          Length = 349

 Score =  104 bits (249), Expect = 1e-22
 Identities = 49/93 (52%), Positives = 67/93 (72%), Gaps = 2/93 (2%)
 Frame = +1

Query: 400 IEPHRHPGVFIARGKEDA--LVTKNLVPGSEVYGEKRISVENEGDKVEYRVWNPFRSKLA 573
           IEPHRH GV++ R + DA  L+T+N    ++ YGE+R+  E    + E+RVW+PF+SKLA
Sbjct: 114 IEPHRHYGVYLLRNRFDAIQLLTRNTSSSADDYGERRVISEYREMRCEFRVWSPFQSKLA 173

Query: 574 AAIMGGVDAIHMAPGSRVLYLGAASGTTVSHVS 672
           A IMGGV  +H+  GS+VLYLGA  G +VSH+S
Sbjct: 174 AGIMGGVSDLHLQIGSKVLYLGAGFGRSVSHIS 206


>AE014297-1590|AAF54870.1|  349|Drosophila melanogaster CG10909-PA
           protein.
          Length = 349

 Score =  104 bits (249), Expect = 1e-22
 Identities = 49/93 (52%), Positives = 67/93 (72%), Gaps = 2/93 (2%)
 Frame = +1

Query: 400 IEPHRHPGVFIARGKEDA--LVTKNLVPGSEVYGEKRISVENEGDKVEYRVWNPFRSKLA 573
           IEPHRH GV++ R + DA  L+T+N    ++ YGE+R+  E    + E+RVW+PF+SKLA
Sbjct: 114 IEPHRHYGVYLLRNRFDAIQLLTRNTSSSADDYGERRVISEYREMRCEFRVWSPFQSKLA 173

Query: 574 AAIMGGVDAIHMAPGSRVLYLGAASGTTVSHVS 672
           A IMGGV  +H+  GS+VLYLGA  G +VSH+S
Sbjct: 174 AGIMGGVSDLHLQIGSKVLYLGAGFGRSVSHIS 206


>X05285-1|CAA28903.1|  147|Drosophila melanogaster fibrillarin
           protein.
          Length = 147

 Score = 58.8 bits (136), Expect = 6e-09
 Identities = 26/30 (86%), Positives = 27/30 (90%)
 Frame = +1

Query: 394 VIIEPHRHPGVFIARGKEDALVTKNLVPGS 483
           V IEPHRH GVFIARGKEDALVT+N VPGS
Sbjct: 118 VTIEPHRHEGVFIARGKEDALVTRNFVPGS 147


>BT015215-1|AAT94444.1|  290|Drosophila melanogaster RE45856p
           protein.
          Length = 290

 Score = 28.7 bits (61), Expect = 7.7
 Identities = 14/50 (28%), Positives = 19/50 (38%)
 Frame = -1

Query: 620 DPGAMCIASTPPIIAAANFDLNGFQTLYSTLSPSFSTDILFSP*TSDPGT 471
           D G  C+     +        NGF  LYS   PSF  +      T++  T
Sbjct: 165 DYGGPCLKPATDLFTPIEVSSNGFSALYSVKFPSFINEFFICAKTAEKTT 214


>BT012665-1|AAT08471.1|  308|Drosophila melanogaster RE62493p
           protein.
          Length = 308

 Score = 28.7 bits (61), Expect = 7.7
 Identities = 14/50 (28%), Positives = 19/50 (38%)
 Frame = -1

Query: 620 DPGAMCIASTPPIIAAANFDLNGFQTLYSTLSPSFSTDILFSP*TSDPGT 471
           D G  C+     +        NGF  LYS   PSF  +      T++  T
Sbjct: 183 DYGGPCLKPATDLFTPIEVSSNGFSALYSVKFPSFINEFFICAKTAEKTT 232


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,719,308
Number of Sequences: 53049
Number of extensions: 343883
Number of successful extensions: 970
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 891
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 968
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2930645700
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)