Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc12i24
(707 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC736.13 |||short chain dehydrogenase|Schizosaccharomyces pomb... 81 2e-16
SPAC19A8.06 |||short chain dehydrogenase|Schizosaccharomyces pom... 56 7e-09
SPAC521.03 |||short chain dehydrogenase |Schizosaccharomyces pom... 50 3e-07
SPAC4H3.08 |||short chain dehydrogenase |Schizosaccharomyces pom... 41 2e-04
SPCC1450.15 |||pig-F |Schizosaccharomyces pombe|chr 3|||Manual 41 2e-04
SPAC8E11.10 |||sorbose reductase |Schizosaccharomyces pombe|chr ... 34 0.017
SPBC30D10.05c |||sepiapterin reductase |Schizosaccharomyces pomb... 33 0.040
SPAC922.06 |||short chain dehydrogenase|Schizosaccharomyces pomb... 31 0.21
SPAC4G9.15 |||ketoreductase |Schizosaccharomyces pombe|chr 1|||M... 31 0.21
SPCC663.09c |||short chain dehydrogenase |Schizosaccharomyces po... 30 0.37
SPCC663.06c |||short chain dehydrogenase |Schizosaccharomyces po... 29 0.65
SPCC24B10.20 |||short chain dehydrogenase |Schizosaccharomyces p... 29 0.86
SPAC57A7.11 |mip1||WD repeat protein Mip1|Schizosaccharomyces po... 29 0.86
SPAC3A11.08 |pcu4|cul4, Cul-4|cullin 4|Schizosaccharomyces pombe... 29 0.86
SPAC3G9.02 |oar2||3-oxoacyl-[acyl-carrier-protein] reductase Oar... 28 1.1
SPAC25B8.04c |||mitochondrial splicing suppressor |Schizosacchar... 27 2.0
SPAPB1E7.02c |mcl1|slr3|DNA polymerase alpha accessory factor Mc... 27 2.6
SPBC25H2.13c |cdc20|pol2|DNA polymerase epsilon catalytic subuni... 27 3.5
SPCC663.08c |||short chain dehydrogenase |Schizosaccharomyces po... 27 3.5
SPCC162.03 |||short chain dehydrogenase |Schizosaccharomyces pom... 26 4.6
SPBC1198.01 |||glutathione-dependent formaldehyde dehydrogenase ... 25 8.0
>SPCC736.13 |||short chain dehydrogenase|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 339
Score = 80.6 bits (190), Expect = 2e-16
Identities = 38/105 (36%), Positives = 63/105 (60%)
Frame = +2
Query: 188 RTIIITGANSGIGKAAAKDFAKRGAKVFMACRDVKKCEEQRRDIVLETNNKYVYCRPCDL 367
+ ++TG++ GIG A + A++GAKV++A R+ +K ++ + I E + + DL
Sbjct: 43 KVALVTGSSGGIGYVTALELARKGAKVYLAGRNEEKYQKVMKQIHDEVRHSKIRFLRLDL 102
Query: 368 ASTASIREFVARFKGEEPHLHVLVNNAGVMEPPKGVTKDGFETQL 502
S+ + F +E LH+LVNNAG+M PP +TKDG+E Q+
Sbjct: 103 LDFESVYQAAESFIAKEEKLHILVNNAGIMNPPFELTKDGYELQI 147
>SPAC19A8.06 |||short chain dehydrogenase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 397
Score = 55.6 bits (128), Expect = 7e-09
Identities = 37/129 (28%), Positives = 65/129 (50%), Gaps = 7/129 (5%)
Frame = +2
Query: 134 FKDYYSGPPYDRSVRADNRTIIITGANSGIGKAAAKDFAKRGAKVFMACRDV--KKCEEQ 307
FK + SG + + +++TG +SGIG+ + A GA+V + R + +
Sbjct: 58 FKFWTSGRTTTWERKMNGMVVMVTGGSSGIGQVVVEKLASLGAQVVILLRTEPDQFTVDY 117
Query: 308 RRDIVLETNNKYVYCRPCDLASTASIREFVARFKGEEP--HLHVLVNNAGVMEPP---KG 472
D+ T N+ +Y CDL+S S+R+F ++ P L ++V +GV+ PP +
Sbjct: 118 IMDLRKRTKNQLIYTEVCDLSSMLSVRKFATKWIDCTPIRRLDMIVLCSGVLLPPFMDRQ 177
Query: 473 VTKDGFETQ 499
T++G E Q
Sbjct: 178 TTEEGVELQ 186
>SPAC521.03 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 259
Score = 50.0 bits (114), Expect = 3e-07
Identities = 36/97 (37%), Positives = 50/97 (51%), Gaps = 4/97 (4%)
Frame = +2
Query: 176 RADNRTIIITGANSGIGKAAAKDFAK-RGAKVFMACRDVKKCEEQRRDIVLETNNKY--- 343
R D +TI+ITGA+SGIGK+ A + AK K+ +A R EE I E +KY
Sbjct: 3 RLDGKTILITGASSGIGKSTAFEIAKVAKVKLILAARRFSTVEE----IAKELESKYEVS 58
Query: 344 VYCRPCDLASTASIREFVARFKGEEPHLHVLVNNAGV 454
V D++ SI + E + VL+NNAG+
Sbjct: 59 VLPLKLDVSDLKSIPGVIESLPKEFADIDVLINNAGL 95
>SPAC4H3.08 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 286
Score = 40.7 bits (91), Expect = 2e-04
Identities = 29/112 (25%), Positives = 55/112 (49%), Gaps = 1/112 (0%)
Frame = +2
Query: 143 YYSGPPYDRSVRADNRTIIITGANSGIGKAAAKDFAKRGAKVFMACRDVKKCE-EQRRDI 319
Y G + S + + ++TG +SGIGKAAA FA+ G+ + ++C ++ + E RD+
Sbjct: 28 YCDGRVHVGSGKLAEKKTLLTGGDSGIGKAAAVMFAREGSDLVISCLPEERDDAEVTRDL 87
Query: 320 VLETNNKYVYCRPCDLASTASIREFVARFKGEEPHLHVLVNNAGVMEPPKGV 475
+ E + + L + + R+ V + + VLVNN + + +
Sbjct: 88 I-EREGRNCWIWEGKLDKSDNCRDLVDFALKKLGWIDVLVNNIAYQQVAQSI 138
>SPCC1450.15 |||pig-F |Schizosaccharomyces pombe|chr 3|||Manual
Length = 503
Score = 40.7 bits (91), Expect = 2e-04
Identities = 23/72 (31%), Positives = 36/72 (50%), Gaps = 2/72 (2%)
Frame = +2
Query: 194 IIITGANSGIGKAAAKDFAKRGAKVFMACRDVKKCEEQRRDIVLET--NNKYVYCRPCDL 367
I++TG + G+GKA AK+ RGA V + R V K +E ++ ++ V DL
Sbjct: 25 ILVTGGSQGLGKAIAKELVLRGANVTIVARTVTKLQEAVAELSDSKIHEDQQVSFESVDL 84
Query: 368 ASTASIREFVAR 403
S S+ + R
Sbjct: 85 TSYESVHSMIER 96
>SPAC8E11.10 |||sorbose reductase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 255
Score = 34.3 bits (75), Expect = 0.017
Identities = 25/93 (26%), Positives = 44/93 (47%), Gaps = 1/93 (1%)
Frame = +2
Query: 188 RTIIITGANSGIGKAAAKDFAKRGAKVFMACRDVKKCEEQRRDIVLETNNKYVYCRPCDL 367
+T +ITG + GIG + AK FA G+ V + KK E ++ + + C +
Sbjct: 10 KTTLITGGSGGIGFSIAKAFAAAGSNVGLLYGRNKKALEYAAEL-RDKHGVQAKAYSCPI 68
Query: 368 ASTASIREFVARFKGE-EPHLHVLVNNAGVMEP 463
+ +++ E + E L V++ NAG+ P
Sbjct: 69 ENRSAVIETTNQAVEELGGRLDVMIANAGIAIP 101
>SPBC30D10.05c |||sepiapterin reductase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 247
Score = 33.1 bits (72), Expect = 0.040
Identities = 26/93 (27%), Positives = 49/93 (52%), Gaps = 1/93 (1%)
Frame = +2
Query: 188 RTIIITGANSGIGKAAAKDFAKRGAKVFMACRDVKKCEEQRRDIVLETNNKYVYCR-PCD 364
+ I++TG++ GIG A A+ K+ AKV R + + ++++ + +V+ +
Sbjct: 7 KVILLTGSSKGIGLATAEALQKK-AKVIAVSRSL---TPELETLLIQNPDSFVHVKGDVT 62
Query: 365 LASTASIREFVARFKGEEPHLHVLVNNAGVMEP 463
ASI + +F G+ L ++ NAGV+EP
Sbjct: 63 EVGKASIETAIKKF-GK---LDSVILNAGVLEP 91
>SPAC922.06 |||short chain dehydrogenase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 258
Score = 30.7 bits (66), Expect = 0.21
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +2
Query: 182 DNRTIIITGANSGIGKAAAKDFAKRGAKV 268
+ R ++ITGA GIGK K F + G +V
Sbjct: 4 EGRVVLITGAAGGIGKVLCKMFTELGDRV 32
>SPAC4G9.15 |||ketoreductase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 341
Score = 30.7 bits (66), Expect = 0.21
Identities = 26/87 (29%), Positives = 39/87 (44%), Gaps = 2/87 (2%)
Frame = +2
Query: 197 IITGANSGIGKAAAKDFAKRGAKVFMACRDVKKCEEQRRDIVLETNNKYVYCRPCDLAST 376
++TGA GIGK A A G V + R +K + ++ LET K V R + T
Sbjct: 61 VVTGATDGIGKEYATQLAMSGFNVVLISRTQEKLDALAKE--LETVAK-VKTRTIAIDYT 117
Query: 377 ASIREFVARFKGE--EPHLHVLVNNAG 451
+ E + + + VL+NN G
Sbjct: 118 KTTAETFEKLHQDLVGTPITVLINNVG 144
>SPCC663.09c |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 253
Score = 29.9 bits (64), Expect = 0.37
Identities = 31/114 (27%), Positives = 45/114 (39%), Gaps = 8/114 (7%)
Frame = +2
Query: 185 NRTIIITGANSGIGKAAAKDFAKR-GAKVFMACRDVKKCEEQRRDIVLETNNKYVYCRPC 361
N+ I G N GIG + K+ + R G VF + R + E + N K V
Sbjct: 5 NKVYFIAGGNRGIGLSLVKELSSREGTTVFASARKPEAATELQEWSKSHPNVKTV---EL 61
Query: 362 DLASTASIREFVARFKGEEPHLHVLVNNAG-------VMEPPKGVTKDGFETQL 502
D+ S S E + VL N+G VME P+ V ++T +
Sbjct: 62 DVTSQQSANEAAQSVAKAVDGIDVLWLNSGICQSYYTVMEAPEEVWNAHYQTNV 115
>SPCC663.06c |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 253
Score = 29.1 bits (62), Expect = 0.65
Identities = 23/91 (25%), Positives = 38/91 (41%), Gaps = 1/91 (1%)
Frame = +2
Query: 185 NRTIIITGANSGIGKAAAKDFAKR-GAKVFMACRDVKKCEEQRRDIVLETNNKYVYCRPC 361
N+ I G N GIG + K+ + R G VF + R + E + ++ V+
Sbjct: 5 NKIYFIAGGNRGIGLSLVKELSNREGTVVFASARKPEAATELQE---WSKSHSNVHIIKL 61
Query: 362 DLASTASIREFVARFKGEEPHLHVLVNNAGV 454
D++S S E + VL N+G+
Sbjct: 62 DISSLESANEAAQEVAKAVGKVDVLWVNSGI 92
>SPCC24B10.20 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 254
Score = 28.7 bits (61), Expect = 0.86
Identities = 25/100 (25%), Positives = 43/100 (43%), Gaps = 1/100 (1%)
Frame = +2
Query: 197 IITGANSGIGKAAAKDFA-KRGAKVFMACRDVKKCEEQRRDIVLETNNKYVYCRPCDLAS 373
+I G N GIG + K+ + K G VF + R E + +N V+ D+ S
Sbjct: 10 VIVGGNRGIGLSLVKELSNKEGVTVFASARGPGSASELKDWSKTHSN---VHIIKLDVTS 66
Query: 374 TASIREFVARFKGEEPHLHVLVNNAGVMEPPKGVTKDGFE 493
S ++ + + + VL N+G+ + + V K E
Sbjct: 67 LRSAKDAAMQVEKVVKCIDVLWVNSGISKSFQPVLKTSDE 106
>SPAC57A7.11 |mip1||WD repeat protein Mip1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1313
Score = 28.7 bits (61), Expect = 0.86
Identities = 13/40 (32%), Positives = 23/40 (57%)
Frame = +3
Query: 180 PTTEQLSLLVLTAVSGKLQQKTSPKGVLRCLWRAVTSRSA 299
P +L+L +L + G+LQ + +P G L ++ A+T A
Sbjct: 338 PFPNKLNLNMLLKIPGRLQDRRTPLGELNWIFTAITDTIA 377
>SPAC3A11.08 |pcu4|cul4, Cul-4|cullin 4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 734
Score = 28.7 bits (61), Expect = 0.86
Identities = 28/98 (28%), Positives = 40/98 (40%), Gaps = 2/98 (2%)
Frame = +3
Query: 129 AYSKITTAVLRTTGPSAPTTEQLSLLVLTAVSGKLQQKTSPKGVLRC--LWRAVTSRSAR 302
AY K+ A SA +L LL + + Q S +G+ R + + TS S R
Sbjct: 425 AYYKLDIAKRLLLNKSASAQNELMLLDMLKKTCGSQFTHSLEGMFRDVNISKEFTS-SFR 483
Query: 303 SNGATSCLRRTTNTCTADPATWPARPPSESSLPDSKER 416
+ A L R A WP+ P S LPD ++
Sbjct: 484 HSKAAHNLHRDLYVNVLSQAYWPSYPESHIRLPDDMQQ 521
>SPAC3G9.02 |oar2||3-oxoacyl-[acyl-carrier-protein] reductase Oar2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 236
Score = 28.3 bits (60), Expect = 1.1
Identities = 11/33 (33%), Positives = 23/33 (69%)
Frame = +2
Query: 188 RTIIITGANSGIGKAAAKDFAKRGAKVFMACRD 286
R ++ITG +SG+GK A+ ++++G + + R+
Sbjct: 2 RKVLITGGSSGLGKRIAQIWSQKGHQCHIVGRN 34
>SPAC25B8.04c |||mitochondrial splicing suppressor
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 378
Score = 27.5 bits (58), Expect = 2.0
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = -1
Query: 116 PRPLLQSPKLPACWEPTFSVLLNRRQRVW 30
P PL+ P + W PT L++ R VW
Sbjct: 277 PMPLISHPLYSSSWIPTLHDLVSTRCSVW 305
>SPAPB1E7.02c |mcl1|slr3|DNA polymerase alpha accessory factor
Mcl1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 815
Score = 27.1 bits (57), Expect = 2.6
Identities = 16/33 (48%), Positives = 19/33 (57%)
Frame = -2
Query: 277 RHKHLSTPFGEVFCCSFPDTAVSTSNDNCSVVG 179
R KHL PF V C SF DT ++ +ND S G
Sbjct: 554 RSKHL--PF--VACSSFQDTIITIANDGLSSDG 582
>SPBC25H2.13c |cdc20|pol2|DNA polymerase epsilon catalytic subunit a
Pol2 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 2199
Score = 26.6 bits (56), Expect = 3.5
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = -2
Query: 511 IDPELGLEAVLSDSLGWFHHPGVIDQHVKVWLLSFESGNELSD 383
I+ +L + + D++G H V+ VK W SGN L+D
Sbjct: 1734 INDDLEEKLGIHDNIGLTHSLPVLKALVKTWWNEAASGNNLAD 1776
>SPCC663.08c |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 253
Score = 26.6 bits (56), Expect = 3.5
Identities = 13/34 (38%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Frame = +2
Query: 185 NRTIIITGANSGIGKAAAKDFAKR-GAKVFMACR 283
N+ I G N GIG + K+ + R G VF + R
Sbjct: 5 NKIYFIAGGNRGIGLSLVKELSNRKGTVVFASAR 38
>SPCC162.03 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 292
Score = 26.2 bits (55), Expect = 4.6
Identities = 21/87 (24%), Positives = 41/87 (47%)
Frame = +2
Query: 191 TIIITGANSGIGKAAAKDFAKRGAKVFMACRDVKKCEEQRRDIVLETNNKYVYCRPCDLA 370
T++ITG++ G+G A K +G V +AC + D + ++K + + D+
Sbjct: 7 TVLITGSSKGLGYALVKVGLAQGYNV-IAC-------SRAPDTITIEHSKLLKLK-LDVT 57
Query: 371 STASIREFVARFKGEEPHLHVLVNNAG 451
S+ K ++ +++NNAG
Sbjct: 58 DVKSVETAFKDAKRRFGNVDIVINNAG 84
>SPBC1198.01 |||glutathione-dependent formaldehyde dehydrogenase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 423
Score = 25.4 bits (53), Expect = 8.0
Identities = 7/17 (41%), Positives = 11/17 (64%)
Frame = -2
Query: 271 KHLSTPFGEVFCCSFPD 221
+++ PF E+ CC PD
Sbjct: 177 EYIRVPFAEINCCKLPD 193
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,724,462
Number of Sequences: 5004
Number of extensions: 53344
Number of successful extensions: 188
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 183
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 186
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 329179816
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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