Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc12i17
(710 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AK095468-1|BAC04554.1| 312|Homo sapiens protein ( Homo sapiens ... 36 0.11
AB065928-1|BAC06143.1| 312|Homo sapiens seven transmembrane hel... 36 0.11
BX538093-1|CAD98012.1| 1732|Homo sapiens hypothetical protein pr... 33 1.3
AK131453-1|BAD18598.1| 1300|Homo sapiens protein ( Homo sapiens ... 33 1.3
AB082528-1|BAC02706.2| 1685|Homo sapiens KIAA1997 protein protein. 33 1.3
BC039340-1|AAH39340.1| 731|Homo sapiens ARHGAP20 protein protein. 31 4.1
AY882585-1|AAW78659.1| 3080|Homo sapiens G protein-coupled recep... 31 4.1
AY496267-1|AAS45470.1| 1165|Homo sapiens RhoGTPase regulating pr... 31 4.1
AY496266-1|AAS45469.1| 1168|Homo sapiens RhoGTPase regulating pr... 31 4.1
AY496265-1|AAS45468.1| 1155|Homo sapiens RhoGTPase regulating pr... 31 4.1
AY496264-1|AAS45467.1| 1155|Homo sapiens RhoGTPase regulating pr... 31 4.1
AY496263-1|AAS45466.1| 1191|Homo sapiens RhoGTPase regulating pr... 31 4.1
AY255581-1|AAO85093.1| 1271|Homo sapiens G protein-coupled recep... 31 4.1
AY140954-1|AAN46668.1| 2799|Homo sapiens G-protein coupled recep... 31 4.1
AL161778-2|CAI40998.2| 2875|Homo sapiens G protein-coupled recep... 31 4.1
AL161778-1|CAM21249.1| 3080|Homo sapiens G protein-coupled recep... 31 4.1
AL136167-2|CAM28220.1| 2875|Homo sapiens G protein-coupled recep... 31 4.1
AL136167-1|CAM28221.1| 3080|Homo sapiens G protein-coupled recep... 31 4.1
AL078638-16|CAM21579.1| 2875|Homo sapiens G protein-coupled rece... 31 4.1
AL078638-15|CAM21580.1| 3080|Homo sapiens G protein-coupled rece... 31 4.1
AB037812-1|BAA92629.1| 1194|Homo sapiens KIAA1391 protein protein. 31 4.1
X65551-1|CAA46520.1| 2896|Homo sapiens antigen of the monoclonal... 30 7.1
X65550-1|CAA46519.1| 3256|Homo sapiens antigen of the monoclonal... 30 7.1
BC035010-1|AAH35010.1| 1179|Homo sapiens TDRD1 protein protein. 30 7.1
AL390236-2|CAH73170.1| 2896|Homo sapiens antigen identified by m... 30 7.1
AL390236-1|CAH73169.1| 3256|Homo sapiens antigen identified by m... 30 7.1
AL355529-2|CAI16903.1| 2896|Homo sapiens antigen identified by m... 30 7.1
AL355529-1|CAI16902.1| 3256|Homo sapiens antigen identified by m... 30 7.1
AK024735-1|BAB14982.1| 713|Homo sapiens protein ( Homo sapiens ... 30 7.1
AF285606-1|AAK31985.1| 777|Homo sapiens tudor domain containing... 30 7.1
BC117265-1|AAI17266.1| 1323|Homo sapiens chromosome 11 open read... 30 9.4
AJ430203-1|CAD22881.1| 1322|Homo sapiens EMSY protein protein. 30 9.4
>AK095468-1|BAC04554.1| 312|Homo sapiens protein ( Homo sapiens
cDNA FLJ38149 fis, clone D9OST2004018, moderately
similar to OLFACTORY RECEPTOR-LIKE PROTEIN. ).
Length = 312
Score = 36.3 bits (80), Expect = 0.11
Identities = 37/125 (29%), Positives = 54/125 (43%), Gaps = 5/125 (4%)
Frame = -3
Query: 555 SPSPITSTFGASIVESTFLITVLA-----ITISFPSTVSTGILFSLSRLNSKSHLGSDLT 391
S P F + S +L+TVL + IS S + T + F LS L+ S T
Sbjct: 18 SEDPELQPFIFGLFLSMYLVTVLGNLLIILAISSDSHLHTPMYFFLSNLSWVDICFS--T 75
Query: 390 LIVPISLLMSVNESKAIFFVSTLPLDLAKSFLSFLSDLSATVLSKYAFSKVVQHLRHILS 211
IVP L+ E+KAI ++ L F L L TV++ F V L +++
Sbjct: 76 CIVPKMLVNIQTENKAISYMDCLTQVYFSMFFPILDTLLLTVMAYDRFVAVCHPLHYMII 135
Query: 210 GSPSL 196
+P L
Sbjct: 136 MNPHL 140
>AB065928-1|BAC06143.1| 312|Homo sapiens seven transmembrane helix
receptor protein.
Length = 312
Score = 36.3 bits (80), Expect = 0.11
Identities = 37/125 (29%), Positives = 54/125 (43%), Gaps = 5/125 (4%)
Frame = -3
Query: 555 SPSPITSTFGASIVESTFLITVLA-----ITISFPSTVSTGILFSLSRLNSKSHLGSDLT 391
S P F + S +L+TVL + IS S + T + F LS L+ S T
Sbjct: 18 SEDPELQPFIFGLFLSMYLVTVLGNLLIILAISSDSHLHTPMYFFLSNLSWVDICFS--T 75
Query: 390 LIVPISLLMSVNESKAIFFVSTLPLDLAKSFLSFLSDLSATVLSKYAFSKVVQHLRHILS 211
IVP L+ E+KAI ++ L F L L TV++ F V L +++
Sbjct: 76 CIVPKMLVNIQTENKAISYMDCLTQVYFSMFFPILDTLLLTVMAYDRFVAVCHPLHYMII 135
Query: 210 GSPSL 196
+P L
Sbjct: 136 MNPHL 140
>BX538093-1|CAD98012.1| 1732|Homo sapiens hypothetical protein
protein.
Length = 1732
Score = 32.7 bits (71), Expect = 1.3
Identities = 16/52 (30%), Positives = 26/52 (50%)
Frame = +2
Query: 284 DRKLRKLLAKSKGNVLTKKIAFDSFTDIKSEIGTISVKSEPKWDLELSLDSE 439
+ L + LA S+GN+L K +S K+ I + + L++SLD E
Sbjct: 862 EESLLETLATSQGNILENKDLIESLNQTKASSALIQESLKESYKLQISLDQE 913
>AK131453-1|BAD18598.1| 1300|Homo sapiens protein ( Homo sapiens
cDNA FLJ16607 fis, clone TESTI4010382, highly similar
to Rattus norvegicus dynein, cytoplasmic, heavy chain 2
(Dnch2). ).
Length = 1300
Score = 32.7 bits (71), Expect = 1.3
Identities = 16/52 (30%), Positives = 26/52 (50%)
Frame = +2
Query: 284 DRKLRKLLAKSKGNVLTKKIAFDSFTDIKSEIGTISVKSEPKWDLELSLDSE 439
+ L + LA S+GN+L K +S K+ I + + L++SLD E
Sbjct: 430 EESLLETLATSQGNILENKDLIESLNQTKASSALIQESLKESYKLQISLDQE 481
>AB082528-1|BAC02706.2| 1685|Homo sapiens KIAA1997 protein protein.
Length = 1685
Score = 32.7 bits (71), Expect = 1.3
Identities = 16/52 (30%), Positives = 26/52 (50%)
Frame = +2
Query: 284 DRKLRKLLAKSKGNVLTKKIAFDSFTDIKSEIGTISVKSEPKWDLELSLDSE 439
+ L + LA S+GN+L K +S K+ I + + L++SLD E
Sbjct: 815 EESLLETLATSQGNILENKDLIESLNQTKASSALIQESLKESYKLQISLDQE 866
>BC039340-1|AAH39340.1| 731|Homo sapiens ARHGAP20 protein protein.
Length = 731
Score = 31.1 bits (67), Expect = 4.1
Identities = 32/97 (32%), Positives = 48/97 (49%), Gaps = 8/97 (8%)
Frame = -3
Query: 267 VLSKYAFSKVVQHLRHILSGSPSLQET-FTSAIAVSISA*FP---DNLYLNNGH--KVLL 106
VL +Y F L +I S S Q T F A+ V+ S +P + L N KV L
Sbjct: 26 VLLRYLFGV----LHNIEQHSSSNQMTAFNLAVCVAPSILWPPASSSPELENEFTKKVSL 81
Query: 105 LVRHIRQDCISTMGFEFVSIFNELS--ADNIDNKSEI 1
L++ + ++C+ G E S+F E+S D +N S+I
Sbjct: 82 LIQFLIENCLRIFGEEITSLFREVSVRCDTRENASDI 118
>AY882585-1|AAW78659.1| 3080|Homo sapiens G protein-coupled receptor
112 protein.
Length = 3080
Score = 31.1 bits (67), Expect = 4.1
Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Frame = -3
Query: 561 AASPSPITSTFGASIVESTFLITVLAITISFPSTVSTGILFSLSRLNSKSHLGSD--LTL 388
+A+P P+T F + S+ + +T+S PST++ FS S L+ S+L S T
Sbjct: 1005 SATPVPVTHMFSLPVNGSSVVAEETEVTMSEPSTLARA--FSTSVLSDVSNLSSTTMTTA 1062
Query: 387 IVP 379
+VP
Sbjct: 1063 LVP 1065
>AY496267-1|AAS45470.1| 1165|Homo sapiens RhoGTPase regulating
protein variant ARHGAP20-1be protein.
Length = 1165
Score = 31.1 bits (67), Expect = 4.1
Identities = 32/97 (32%), Positives = 48/97 (49%), Gaps = 8/97 (8%)
Frame = -3
Query: 267 VLSKYAFSKVVQHLRHILSGSPSLQET-FTSAIAVSISA*FP---DNLYLNNGH--KVLL 106
VL +Y F L +I S S Q T F A+ V+ S +P + L N KV L
Sbjct: 457 VLLRYLFGV----LHNIEQHSSSNQMTAFNLAVCVAPSILWPPASSSPELENEFTKKVSL 512
Query: 105 LVRHIRQDCISTMGFEFVSIFNELS--ADNIDNKSEI 1
L++ + ++C+ G E S+F E+S D +N S+I
Sbjct: 513 LIQFLIENCLRIFGEEITSLFREVSVRCDTRENASDI 549
>AY496266-1|AAS45469.1| 1168|Homo sapiens RhoGTPase regulating
protein variant ARHGAP20-1c protein.
Length = 1168
Score = 31.1 bits (67), Expect = 4.1
Identities = 32/97 (32%), Positives = 48/97 (49%), Gaps = 8/97 (8%)
Frame = -3
Query: 267 VLSKYAFSKVVQHLRHILSGSPSLQET-FTSAIAVSISA*FP---DNLYLNNGH--KVLL 106
VL +Y F L +I S S Q T F A+ V+ S +P + L N KV L
Sbjct: 460 VLLRYLFGV----LHNIEQHSSSNQMTAFNLAVCVAPSILWPPASSSPELENEFTKKVSL 515
Query: 105 LVRHIRQDCISTMGFEFVSIFNELS--ADNIDNKSEI 1
L++ + ++C+ G E S+F E+S D +N S+I
Sbjct: 516 LIQFLIENCLRIFGEEITSLFREVSVRCDTRENASDI 552
>AY496265-1|AAS45468.1| 1155|Homo sapiens RhoGTPase regulating
protein variant ARHGAP20-1e protein.
Length = 1155
Score = 31.1 bits (67), Expect = 4.1
Identities = 32/97 (32%), Positives = 48/97 (49%), Gaps = 8/97 (8%)
Frame = -3
Query: 267 VLSKYAFSKVVQHLRHILSGSPSLQET-FTSAIAVSISA*FP---DNLYLNNGH--KVLL 106
VL +Y F L +I S S Q T F A+ V+ S +P + L N KV L
Sbjct: 447 VLLRYLFGV----LHNIEQHSSSNQMTAFNLAVCVAPSILWPPASSSPELENEFTKKVSL 502
Query: 105 LVRHIRQDCISTMGFEFVSIFNELS--ADNIDNKSEI 1
L++ + ++C+ G E S+F E+S D +N S+I
Sbjct: 503 LIQFLIENCLRIFGEEITSLFREVSVRCDTRENASDI 539
>AY496264-1|AAS45467.1| 1155|Homo sapiens RhoGTPase regulating
protein variant ARHGAP20-1d protein.
Length = 1155
Score = 31.1 bits (67), Expect = 4.1
Identities = 32/97 (32%), Positives = 48/97 (49%), Gaps = 8/97 (8%)
Frame = -3
Query: 267 VLSKYAFSKVVQHLRHILSGSPSLQET-FTSAIAVSISA*FP---DNLYLNNGH--KVLL 106
VL +Y F L +I S S Q T F A+ V+ S +P + L N KV L
Sbjct: 447 VLLRYLFGV----LHNIEQHSSSNQMTAFNLAVCVAPSILWPPASSSPELENEFTKKVSL 502
Query: 105 LVRHIRQDCISTMGFEFVSIFNELS--ADNIDNKSEI 1
L++ + ++C+ G E S+F E+S D +N S+I
Sbjct: 503 LIQFLIENCLRIFGEEITSLFREVSVRCDTRENASDI 539
>AY496263-1|AAS45466.1| 1191|Homo sapiens RhoGTPase regulating
protein variant ARHGAP20-1ad protein.
Length = 1191
Score = 31.1 bits (67), Expect = 4.1
Identities = 32/97 (32%), Positives = 48/97 (49%), Gaps = 8/97 (8%)
Frame = -3
Query: 267 VLSKYAFSKVVQHLRHILSGSPSLQET-FTSAIAVSISA*FP---DNLYLNNGH--KVLL 106
VL +Y F L +I S S Q T F A+ V+ S +P + L N KV L
Sbjct: 483 VLLRYLFGV----LHNIEQHSSSNQMTAFNLAVCVAPSILWPPASSSPELENEFTKKVSL 538
Query: 105 LVRHIRQDCISTMGFEFVSIFNELS--ADNIDNKSEI 1
L++ + ++C+ G E S+F E+S D +N S+I
Sbjct: 539 LIQFLIENCLRIFGEEITSLFREVSVRCDTRENASDI 575
>AY255581-1|AAO85093.1| 1271|Homo sapiens G protein-coupled receptor
GPR112 protein.
Length = 1271
Score = 31.1 bits (67), Expect = 4.1
Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Frame = -3
Query: 561 AASPSPITSTFGASIVESTFLITVLAITISFPSTVSTGILFSLSRLNSKSHLGSD--LTL 388
+A+P P+T F + S+ + +T+S PST++ FS S L+ S+L S T
Sbjct: 663 SATPVPVTHMFSLPVNGSSVVAEETEVTMSEPSTLARA--FSTSVLSDVSNLSSTTMTTA 720
Query: 387 IVP 379
+VP
Sbjct: 721 LVP 723
>AY140954-1|AAN46668.1| 2799|Homo sapiens G-protein coupled receptor
GPR112 protein.
Length = 2799
Score = 31.1 bits (67), Expect = 4.1
Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Frame = -3
Query: 561 AASPSPITSTFGASIVESTFLITVLAITISFPSTVSTGILFSLSRLNSKSHLGSD--LTL 388
+A+P P+T F + S+ + +T+S PST++ FS S L+ S+L S T
Sbjct: 941 SATPVPVTHMFSLPVNGSSVVAEETEVTMSEPSTLARA--FSTSVLSDVSNLSSTTMTTA 998
Query: 387 IVP 379
+VP
Sbjct: 999 LVP 1001
>AL161778-2|CAI40998.2| 2875|Homo sapiens G protein-coupled receptor
112 protein.
Length = 2875
Score = 31.1 bits (67), Expect = 4.1
Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Frame = -3
Query: 561 AASPSPITSTFGASIVESTFLITVLAITISFPSTVSTGILFSLSRLNSKSHLGSD--LTL 388
+A+P P+T F + S+ + +T+S PST++ FS S L+ S+L S T
Sbjct: 800 SATPVPVTHMFSLPVNGSSVVAEETEVTMSEPSTLARA--FSTSVLSDVSNLSSTTMTTA 857
Query: 387 IVP 379
+VP
Sbjct: 858 LVP 860
>AL161778-1|CAM21249.1| 3080|Homo sapiens G protein-coupled receptor
112 protein.
Length = 3080
Score = 31.1 bits (67), Expect = 4.1
Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Frame = -3
Query: 561 AASPSPITSTFGASIVESTFLITVLAITISFPSTVSTGILFSLSRLNSKSHLGSD--LTL 388
+A+P P+T F + S+ + +T+S PST++ FS S L+ S+L S T
Sbjct: 1005 SATPVPVTHMFSLPVNGSSVVAEETEVTMSEPSTLARA--FSTSVLSDVSNLSSTTMTTA 1062
Query: 387 IVP 379
+VP
Sbjct: 1063 LVP 1065
>AL136167-2|CAM28220.1| 2875|Homo sapiens G protein-coupled receptor
112 protein.
Length = 2875
Score = 31.1 bits (67), Expect = 4.1
Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Frame = -3
Query: 561 AASPSPITSTFGASIVESTFLITVLAITISFPSTVSTGILFSLSRLNSKSHLGSD--LTL 388
+A+P P+T F + S+ + +T+S PST++ FS S L+ S+L S T
Sbjct: 800 SATPVPVTHMFSLPVNGSSVVAEETEVTMSEPSTLARA--FSTSVLSDVSNLSSTTMTTA 857
Query: 387 IVP 379
+VP
Sbjct: 858 LVP 860
>AL136167-1|CAM28221.1| 3080|Homo sapiens G protein-coupled receptor
112 protein.
Length = 3080
Score = 31.1 bits (67), Expect = 4.1
Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Frame = -3
Query: 561 AASPSPITSTFGASIVESTFLITVLAITISFPSTVSTGILFSLSRLNSKSHLGSD--LTL 388
+A+P P+T F + S+ + +T+S PST++ FS S L+ S+L S T
Sbjct: 1005 SATPVPVTHMFSLPVNGSSVVAEETEVTMSEPSTLARA--FSTSVLSDVSNLSSTTMTTA 1062
Query: 387 IVP 379
+VP
Sbjct: 1063 LVP 1065
>AL078638-16|CAM21579.1| 2875|Homo sapiens G protein-coupled
receptor 112 protein.
Length = 2875
Score = 31.1 bits (67), Expect = 4.1
Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Frame = -3
Query: 561 AASPSPITSTFGASIVESTFLITVLAITISFPSTVSTGILFSLSRLNSKSHLGSD--LTL 388
+A+P P+T F + S+ + +T+S PST++ FS S L+ S+L S T
Sbjct: 800 SATPVPVTHMFSLPVNGSSVVAEETEVTMSEPSTLARA--FSTSVLSDVSNLSSTTMTTA 857
Query: 387 IVP 379
+VP
Sbjct: 858 LVP 860
>AL078638-15|CAM21580.1| 3080|Homo sapiens G protein-coupled receptor
112 protein.
Length = 3080
Score = 31.1 bits (67), Expect = 4.1
Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Frame = -3
Query: 561 AASPSPITSTFGASIVESTFLITVLAITISFPSTVSTGILFSLSRLNSKSHLGSD--LTL 388
+A+P P+T F + S+ + +T+S PST++ FS S L+ S+L S T
Sbjct: 1005 SATPVPVTHMFSLPVNGSSVVAEETEVTMSEPSTLARA--FSTSVLSDVSNLSSTTMTTA 1062
Query: 387 IVP 379
+VP
Sbjct: 1063 LVP 1065
>AB037812-1|BAA92629.1| 1194|Homo sapiens KIAA1391 protein protein.
Length = 1194
Score = 31.1 bits (67), Expect = 4.1
Identities = 32/97 (32%), Positives = 48/97 (49%), Gaps = 8/97 (8%)
Frame = -3
Query: 267 VLSKYAFSKVVQHLRHILSGSPSLQET-FTSAIAVSISA*FP---DNLYLNNGH--KVLL 106
VL +Y F L +I S S Q T F A+ V+ S +P + L N KV L
Sbjct: 486 VLLRYLFGV----LHNIEQHSSSNQMTAFNLAVCVAPSILWPPASSSPELENEFTKKVSL 541
Query: 105 LVRHIRQDCISTMGFEFVSIFNELS--ADNIDNKSEI 1
L++ + ++C+ G E S+F E+S D +N S+I
Sbjct: 542 LIQFLIENCLRIFGEEITSLFREVSVRCDTRENASDI 578
>X65551-1|CAA46520.1| 2896|Homo sapiens antigen of the monoclonal
antibody Ki-67 protein.
Length = 2896
Score = 30.3 bits (65), Expect = 7.1
Identities = 25/85 (29%), Positives = 35/85 (41%), Gaps = 1/85 (1%)
Frame = +2
Query: 134 YKLSGNYAEMLTAIADVKVSCNDGLPERICLKCCTTL-EKAYLLKTVAERSDRKLRKLLA 310
++ G E +T K++C PE + T K L K E LRKL
Sbjct: 749 FQTPGPSEESMTDEKTTKIACKSPPPESVDTPTSTKQWPKRSLRKADVEEEFLALRKLTP 808
Query: 311 KSKGNVLTKKIAFDSFTDIKSEIGT 385
+ +LT K A DIK+ +GT
Sbjct: 809 SAGKAMLTPKPAGGDEKDIKAFMGT 833
>X65550-1|CAA46519.1| 3256|Homo sapiens antigen of the monoclonal
antibody Ki-67 protein.
Length = 3256
Score = 30.3 bits (65), Expect = 7.1
Identities = 25/85 (29%), Positives = 35/85 (41%), Gaps = 1/85 (1%)
Frame = +2
Query: 134 YKLSGNYAEMLTAIADVKVSCNDGLPERICLKCCTTL-EKAYLLKTVAERSDRKLRKLLA 310
++ G E +T K++C PE + T K L K E LRKL
Sbjct: 1109 FQTPGPSEESMTDEKTTKIACKSPPPESVDTPTSTKQWPKRSLRKADVEEEFLALRKLTP 1168
Query: 311 KSKGNVLTKKIAFDSFTDIKSEIGT 385
+ +LT K A DIK+ +GT
Sbjct: 1169 SAGKAMLTPKPAGGDEKDIKAFMGT 1193
>BC035010-1|AAH35010.1| 1179|Homo sapiens TDRD1 protein protein.
Length = 1179
Score = 30.3 bits (65), Expect = 7.1
Identities = 23/81 (28%), Positives = 35/81 (43%), Gaps = 1/81 (1%)
Frame = +2
Query: 116 LCPLFRYKLSGNYAEMLTAIADVKVSCNDGLPERICLKCCTTLEKAYLLKTVAERSDRKL 295
LCP+ L + +A VK S PE ICL K +K V + + L
Sbjct: 590 LCPIIPKLLELPMQAIKCVLAGVKPSLGIWTPEAICLMKKLVQNKIITVKVVDKLENSSL 649
Query: 296 RKLLAKSK-GNVLTKKIAFDS 355
+L+ KS+ +V K+ D+
Sbjct: 650 VELIDKSETPHVSVSKVLLDA 670
>AL390236-2|CAH73170.1| 2896|Homo sapiens antigen identified by
monoclonal antibody Ki-67 protein.
Length = 2896
Score = 30.3 bits (65), Expect = 7.1
Identities = 25/85 (29%), Positives = 35/85 (41%), Gaps = 1/85 (1%)
Frame = +2
Query: 134 YKLSGNYAEMLTAIADVKVSCNDGLPERICLKCCTTL-EKAYLLKTVAERSDRKLRKLLA 310
++ G E +T K++C PE + T K L K E LRKL
Sbjct: 749 FQTPGPSEESMTDEKTTKIACKSPPPESVDTPTSTKQWPKRSLRKADVEEEFLALRKLTP 808
Query: 311 KSKGNVLTKKIAFDSFTDIKSEIGT 385
+ +LT K A DIK+ +GT
Sbjct: 809 SAGKAMLTPKPAGGDEKDIKAFMGT 833
>AL390236-1|CAH73169.1| 3256|Homo sapiens antigen identified by
monoclonal antibody Ki-67 protein.
Length = 3256
Score = 30.3 bits (65), Expect = 7.1
Identities = 25/85 (29%), Positives = 35/85 (41%), Gaps = 1/85 (1%)
Frame = +2
Query: 134 YKLSGNYAEMLTAIADVKVSCNDGLPERICLKCCTTL-EKAYLLKTVAERSDRKLRKLLA 310
++ G E +T K++C PE + T K L K E LRKL
Sbjct: 1109 FQTPGPSEESMTDEKTTKIACKSPPPESVDTPTSTKQWPKRSLRKADVEEEFLALRKLTP 1168
Query: 311 KSKGNVLTKKIAFDSFTDIKSEIGT 385
+ +LT K A DIK+ +GT
Sbjct: 1169 SAGKAMLTPKPAGGDEKDIKAFMGT 1193
>AL355529-2|CAI16903.1| 2896|Homo sapiens antigen identified by
monoclonal antibody Ki-67 protein.
Length = 2896
Score = 30.3 bits (65), Expect = 7.1
Identities = 25/85 (29%), Positives = 35/85 (41%), Gaps = 1/85 (1%)
Frame = +2
Query: 134 YKLSGNYAEMLTAIADVKVSCNDGLPERICLKCCTTL-EKAYLLKTVAERSDRKLRKLLA 310
++ G E +T K++C PE + T K L K E LRKL
Sbjct: 749 FQTPGPSEESMTDEKTTKIACKSPPPESVDTPTSTKQWPKRSLRKADVEEEFLALRKLTP 808
Query: 311 KSKGNVLTKKIAFDSFTDIKSEIGT 385
+ +LT K A DIK+ +GT
Sbjct: 809 SAGKAMLTPKPAGGDEKDIKAFMGT 833
>AL355529-1|CAI16902.1| 3256|Homo sapiens antigen identified by
monoclonal antibody Ki-67 protein.
Length = 3256
Score = 30.3 bits (65), Expect = 7.1
Identities = 25/85 (29%), Positives = 35/85 (41%), Gaps = 1/85 (1%)
Frame = +2
Query: 134 YKLSGNYAEMLTAIADVKVSCNDGLPERICLKCCTTL-EKAYLLKTVAERSDRKLRKLLA 310
++ G E +T K++C PE + T K L K E LRKL
Sbjct: 1109 FQTPGPSEESMTDEKTTKIACKSPPPESVDTPTSTKQWPKRSLRKADVEEEFLALRKLTP 1168
Query: 311 KSKGNVLTKKIAFDSFTDIKSEIGT 385
+ +LT K A DIK+ +GT
Sbjct: 1169 SAGKAMLTPKPAGGDEKDIKAFMGT 1193
>AK024735-1|BAB14982.1| 713|Homo sapiens protein ( Homo sapiens
cDNA: FLJ21082 fis, clone CAS02992. ).
Length = 713
Score = 30.3 bits (65), Expect = 7.1
Identities = 23/81 (28%), Positives = 35/81 (43%), Gaps = 1/81 (1%)
Frame = +2
Query: 116 LCPLFRYKLSGNYAEMLTAIADVKVSCNDGLPERICLKCCTTLEKAYLLKTVAERSDRKL 295
LCP+ L + +A VK S PE ICL K +K V + + L
Sbjct: 121 LCPIIPKLLELPMQAIKCVLAGVKPSLGIWTPEAICLMKKLVQNKIITVKVVDKLENSSL 180
Query: 296 RKLLAKSK-GNVLTKKIAFDS 355
+L+ KS+ +V K+ D+
Sbjct: 181 VELIDKSETPHVSVSKVLLDA 201
>AF285606-1|AAK31985.1| 777|Homo sapiens tudor domain containing
protein 1 protein.
Length = 777
Score = 30.3 bits (65), Expect = 7.1
Identities = 23/81 (28%), Positives = 35/81 (43%), Gaps = 1/81 (1%)
Frame = +2
Query: 116 LCPLFRYKLSGNYAEMLTAIADVKVSCNDGLPERICLKCCTTLEKAYLLKTVAERSDRKL 295
LCP+ L + +A VK S PE ICL K +K V + + L
Sbjct: 187 LCPIIPKLLELPMQAIKCVLAGVKPSLGIWTPEAICLMKKLVQNKIITVKVVDKLENSSL 246
Query: 296 RKLLAKSK-GNVLTKKIAFDS 355
+L+ KS+ +V K+ D+
Sbjct: 247 VELIDKSETPHVSVSKVLLDA 267
>BC117265-1|AAI17266.1| 1323|Homo sapiens chromosome 11 open reading
frame 30 protein.
Length = 1323
Score = 29.9 bits (64), Expect = 9.4
Identities = 33/131 (25%), Positives = 57/131 (43%)
Frame = -3
Query: 555 SPSPITSTFGASIVESTFLITVLAITISFPSTVSTGILFSLSRLNSKSHLGSDLTLIVPI 376
SP IT T ++ +T V+ +T S ST IL SKSH + +T +VP
Sbjct: 258 SPVKITFTKPSTQTTNTTTQKVIIVTTSPSSTFVPNIL-------SKSHNYAAVTKLVPT 310
Query: 375 SLLMSVNESKAIFFVSTLPLDLAKSFLSFLSDLSATVLSKYAFSKVVQHLRHILSGSPSL 196
S++ S + + ++ ++ S S + + + A + VV ++ S
Sbjct: 311 SVIASTTQKPPVVITASQSSLVSNSSSGSSSSTPSPIPNTVAVTAVVSSTPSVVM-STVA 369
Query: 195 QETFTSAIAVS 163
Q TSAI ++
Sbjct: 370 QGVSTSAIKMA 380
>AJ430203-1|CAD22881.1| 1322|Homo sapiens EMSY protein protein.
Length = 1322
Score = 29.9 bits (64), Expect = 9.4
Identities = 33/131 (25%), Positives = 57/131 (43%)
Frame = -3
Query: 555 SPSPITSTFGASIVESTFLITVLAITISFPSTVSTGILFSLSRLNSKSHLGSDLTLIVPI 376
SP IT T ++ +T V+ +T S ST IL SKSH + +T +VP
Sbjct: 257 SPVKITFTKPSTQTTNTTTQKVIIVTTSPSSTFVPNIL-------SKSHNYAAVTKLVPT 309
Query: 375 SLLMSVNESKAIFFVSTLPLDLAKSFLSFLSDLSATVLSKYAFSKVVQHLRHILSGSPSL 196
S++ S + + ++ ++ S S + + + A + VV ++ S
Sbjct: 310 SVIASTTQKPPVVITASQSSLVSNSSSGSSSSTPSPIPNTVAVTAVVSSTPSVVM-STVA 368
Query: 195 QETFTSAIAVS 163
Q TSAI ++
Sbjct: 369 QGVSTSAIKMA 379
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 81,769,482
Number of Sequences: 237096
Number of extensions: 1438694
Number of successful extensions: 2519
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 2435
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2519
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8287202872
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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