Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc12i05
(741 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
U26026-1|AAA69069.1| 377|Apis mellifera long-wavelength rhodops... 23 4.0
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat... 23 4.0
D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein. 22 5.3
AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate r... 22 5.3
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 22 5.3
AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase pro... 22 5.3
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 22 5.3
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 22 7.0
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 22 7.0
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 22 7.0
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 22 7.0
AY703618-1|AAU12614.1| 136|Apis mellifera wingless protein. 22 7.0
AF004169-1|AAC13418.1| 371|Apis mellifera ultraviolet-sensitive... 22 7.0
EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein. 21 9.2
EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein. 21 9.2
>U26026-1|AAA69069.1| 377|Apis mellifera long-wavelength rhodopsin
protein.
Length = 377
Score = 22.6 bits (46), Expect = 4.0
Identities = 12/60 (20%), Positives = 27/60 (45%)
Frame = +2
Query: 140 LSQHLRNLNRKCEKPKLNRTKGNENKNPYGQFSKYIIRNRVTSMTYFTDVRPLVENFTNI 319
++ H +N+ + +K + + +EN+N + + S+ + LV NF+ I
Sbjct: 243 VAAHEKNMREQAKKMNVASLRSSENQNTSAECKLAKVALMTISLWFMAWTPYLVINFSGI 302
>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
receptor protein.
Length = 1040
Score = 22.6 bits (46), Expect = 4.0
Identities = 22/82 (26%), Positives = 37/82 (45%), Gaps = 1/82 (1%)
Frame = +2
Query: 101 VAVGNHHQKDGN*LSQHLRNLNRKCEKPKLNRTKGNENKNP-YGQFSKYIIRNRVTSMTY 277
V+ GN + +G Q N + E+ LN T N +NP + +F ++ + R +
Sbjct: 384 VSDGNEAEVEGTLSVQPQANPVKGFEEYFLNLTVENNRRNPWFVEFWEHHFQCRYPN--- 440
Query: 278 FTDVRPLVENFTNIA*MKK*LT 343
V P +N+T +K LT
Sbjct: 441 -ASVTPYNKNYTKFCSTEKRLT 461
>D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein.
Length = 567
Score = 22.2 bits (45), Expect = 5.3
Identities = 13/41 (31%), Positives = 23/41 (56%)
Frame = -2
Query: 659 FYAQNHTYLYQYKPYKRVSLSIQKVHYIFFFQIKLQH*SLK 537
F + ++T+L + YK V+L+ +K FF + + SLK
Sbjct: 430 FSSSSNTWLRVNENYKTVNLAAEKKDKNSFFNMFKKFASLK 470
>AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate
receptor 1 protein.
Length = 953
Score = 22.2 bits (45), Expect = 5.3
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = +2
Query: 218 NPYGQFSKYIIRN 256
+P GQF YII+N
Sbjct: 483 SPDGQFGNYIIKN 495
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 22.2 bits (45), Expect = 5.3
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = -3
Query: 52 LKNFNFHLLYNDNVKQ 5
LKNFN LL ND + Q
Sbjct: 1031 LKNFNQPLLVNDQLGQ 1046
>AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase
protein.
Length = 567
Score = 22.2 bits (45), Expect = 5.3
Identities = 13/41 (31%), Positives = 23/41 (56%)
Frame = -2
Query: 659 FYAQNHTYLYQYKPYKRVSLSIQKVHYIFFFQIKLQH*SLK 537
F + ++T+L + YK V+L+ +K FF + + SLK
Sbjct: 430 FSSSSNTWLRVNENYKTVNLAAEKKDKNSFFNMFKKFASLK 470
>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
Length = 1598
Score = 22.2 bits (45), Expect = 5.3
Identities = 9/31 (29%), Positives = 15/31 (48%)
Frame = +1
Query: 103 RSRKPPPEGWELIEPTLEELEQKMREAETEP 195
R PPPE W+ ++ L+ K+ + P
Sbjct: 412 RRTSPPPEDWKPLDKCYFCLDGKLPHDDQPP 442
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 21.8 bits (44), Expect = 7.0
Identities = 9/25 (36%), Positives = 14/25 (56%)
Frame = -1
Query: 399 AKTTQIFIPSLFPFRYKIGVSYFFI 325
AKT + FP Y + +++FFI
Sbjct: 459 AKTIDVIARITFPVAYFMFLTFFFI 483
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 21.8 bits (44), Expect = 7.0
Identities = 9/25 (36%), Positives = 14/25 (56%)
Frame = -1
Query: 399 AKTTQIFIPSLFPFRYKIGVSYFFI 325
AKT + FP Y + +++FFI
Sbjct: 445 AKTIDVIARITFPVAYFMFLTFFFI 469
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 21.8 bits (44), Expect = 7.0
Identities = 9/25 (36%), Positives = 14/25 (56%)
Frame = -1
Query: 399 AKTTQIFIPSLFPFRYKIGVSYFFI 325
AKT + FP Y + +++FFI
Sbjct: 479 AKTIDVIARITFPVAYFMFLTFFFI 503
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 21.8 bits (44), Expect = 7.0
Identities = 9/25 (36%), Positives = 14/25 (56%)
Frame = -1
Query: 399 AKTTQIFIPSLFPFRYKIGVSYFFI 325
AKT + FP Y + +++FFI
Sbjct: 428 AKTIDVIARITFPVAYFMFLTFFFI 452
>AY703618-1|AAU12614.1| 136|Apis mellifera wingless protein.
Length = 136
Score = 21.8 bits (44), Expect = 7.0
Identities = 7/24 (29%), Positives = 12/24 (50%)
Frame = +1
Query: 373 GYENLCCLRCIQTRDTNFATNCIC 444
G + +CC R +T++ C C
Sbjct: 112 GCDLMCCGRGYKTQEVTVVERCAC 135
>AF004169-1|AAC13418.1| 371|Apis mellifera ultraviolet-sensitive
opsin protein.
Length = 371
Score = 21.8 bits (44), Expect = 7.0
Identities = 5/17 (29%), Positives = 11/17 (64%)
Frame = -1
Query: 687 MMHLCSCTRILCTEPHI 637
M+ C+C + C +P++
Sbjct: 311 MIPACTCKAVACLDPYV 327
>EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein.
Length = 684
Score = 21.4 bits (43), Expect = 9.2
Identities = 11/47 (23%), Positives = 25/47 (53%)
Frame = -3
Query: 205 SLRAVQFRLLAFSVQVPQVLAQLIPILLVVVSYCDEP*AFYNIFNKI 65
S+ + ++L ++++ Q++P L + S + AFY I+ +I
Sbjct: 380 SIDTLARKILGYNLEAASKY-QIVPSALEIFSTSMKDPAFYRIYKRI 425
>EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein.
Length = 684
Score = 21.4 bits (43), Expect = 9.2
Identities = 11/47 (23%), Positives = 25/47 (53%)
Frame = -3
Query: 205 SLRAVQFRLLAFSVQVPQVLAQLIPILLVVVSYCDEP*AFYNIFNKI 65
S+ + ++L ++++ Q++P L + S + AFY I+ +I
Sbjct: 380 SIDTLARKILGYNLEAASKY-QIVPSALEIFSTSMKDPAFYRIYKRI 425
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 192,149
Number of Sequences: 438
Number of extensions: 4329
Number of successful extensions: 21
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23144850
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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