Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc12h16
(659 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U61234-1|AAB17539.1| 346|Homo sapiens cofactor C protein. 31 3.6
BT007002-1|AAP35648.1| 346|Homo sapiens tubulin-specific chaper... 31 3.6
BC036380-1|AAH36380.1| 1380|Homo sapiens KIAA0980 protein protein. 31 3.6
BC020170-1|AAH20170.1| 346|Homo sapiens tubulin folding cofacto... 31 3.6
BC017479-1|AAH17479.1| 346|Homo sapiens TBCC protein protein. 31 3.6
AL353716-1|CAI14818.1| 346|Homo sapiens tubulin folding cofacto... 31 3.6
AL031672-2|CAI43018.1| 1382|Homo sapiens novel protein protein. 31 3.6
AB023197-1|BAA76824.1| 1406|Homo sapiens KIAA0980 protein protein. 31 3.6
M83216-2|AAA58420.1| 538|Homo sapiens caldesmon protein. 31 4.8
M83216-1|AAA58419.1| 793|Homo sapiens caldesmon protein. 31 4.8
M64110-1|AAA35636.1| 538|Homo sapiens caldesmon protein. 31 4.8
D90453-1|BAA14419.1| 532|Homo sapiens l-caldesmon II protein. 31 4.8
D90452-1|BAA14418.1| 558|Homo sapiens l-caldesmon I protein. 31 4.8
BC061926-1|AAH61926.1| 180|Homo sapiens CALD1 protein protein. 31 4.8
BC040354-1|AAH40354.1| 538|Homo sapiens caldesmon 1 protein. 31 4.8
BC014035-1|AAH14035.1| 314|Homo sapiens CALD1 protein protein. 31 4.8
BC005006-1|AAH05006.1| 153|Homo sapiens Unknown (protein for IM... 31 4.8
AF247820-1|AAF69498.3| 481|Homo sapiens NAG22 protein protein. 31 4.8
Z97054-3|CAI42646.1| 1233|Homo sapiens structural maintenance of... 30 8.4
S78271-1|AAB34405.1| 1233|Homo sapiens SB1.8/DXS423E protein. 30 8.4
D80000-1|BAA11495.2| 1233|Homo sapiens KIAA0178 protein. 30 8.4
BC112127-1|AAI12128.1| 1233|Homo sapiens SMC1 structural mainten... 30 8.4
AL161779-1|CAI42089.1| 1233|Homo sapiens structural maintenance ... 30 8.4
>U61234-1|AAB17539.1| 346|Homo sapiens cofactor C protein.
Length = 346
Score = 31.1 bits (67), Expect = 3.6
Identities = 15/52 (28%), Positives = 27/52 (51%)
Frame = +1
Query: 499 TSIVEKMNDKHSVLERLSRRDAQRLEKLQKAHKAREEVDACDENEDYFSGSF 654
T +E D V ERL RR+ +R ++++ + R+ + EN +F +F
Sbjct: 13 TGDMESQRDLSLVPERLQRREQERQLEVERRKQKRQNQEVEKENSHFFVATF 64
>BT007002-1|AAP35648.1| 346|Homo sapiens tubulin-specific chaperone
c protein.
Length = 346
Score = 31.1 bits (67), Expect = 3.6
Identities = 15/52 (28%), Positives = 27/52 (51%)
Frame = +1
Query: 499 TSIVEKMNDKHSVLERLSRRDAQRLEKLQKAHKAREEVDACDENEDYFSGSF 654
T +E D V ERL RR+ +R ++++ + R+ + EN +F +F
Sbjct: 13 TGDMESQRDLSLVPERLQRREQERQLEVERRKQKRQNQEVEKENSHFFVATF 64
>BC036380-1|AAH36380.1| 1380|Homo sapiens KIAA0980 protein protein.
Length = 1380
Score = 31.1 bits (67), Expect = 3.6
Identities = 16/48 (33%), Positives = 29/48 (60%), Gaps = 2/48 (4%)
Frame = +1
Query: 481 RIEPKDTSIVEKMNDKHSVLERLSRRDAQRLEK--LQKAHKAREEVDA 618
R E ++ V++M+D HS LE+L+ + + LE+ ++ R EV+A
Sbjct: 409 RAEKRNLEFVKEMDDCHSTLEQLTEKKIKHLEQGYRERLSLLRSEVEA 456
>BC020170-1|AAH20170.1| 346|Homo sapiens tubulin folding cofactor C
protein.
Length = 346
Score = 31.1 bits (67), Expect = 3.6
Identities = 15/52 (28%), Positives = 27/52 (51%)
Frame = +1
Query: 499 TSIVEKMNDKHSVLERLSRRDAQRLEKLQKAHKAREEVDACDENEDYFSGSF 654
T +E D V ERL RR+ +R ++++ + R+ + EN +F +F
Sbjct: 13 TGDMESQRDLSLVPERLQRREQERQLEVERRKQKRQNQEVEKENSHFFVATF 64
>BC017479-1|AAH17479.1| 346|Homo sapiens TBCC protein protein.
Length = 346
Score = 31.1 bits (67), Expect = 3.6
Identities = 15/52 (28%), Positives = 27/52 (51%)
Frame = +1
Query: 499 TSIVEKMNDKHSVLERLSRRDAQRLEKLQKAHKAREEVDACDENEDYFSGSF 654
T +E D V ERL RR+ +R ++++ + R+ + EN +F +F
Sbjct: 13 TGDMESQRDLSLVPERLQRREQERQLEVERRKQKRQNQEVEKENSHFFVATF 64
>AL353716-1|CAI14818.1| 346|Homo sapiens tubulin folding cofactor C
protein.
Length = 346
Score = 31.1 bits (67), Expect = 3.6
Identities = 15/52 (28%), Positives = 27/52 (51%)
Frame = +1
Query: 499 TSIVEKMNDKHSVLERLSRRDAQRLEKLQKAHKAREEVDACDENEDYFSGSF 654
T +E D V ERL RR+ +R ++++ + R+ + EN +F +F
Sbjct: 13 TGDMESQRDLSLVPERLQRREQERQLEVERRKQKRQNQEVEKENSHFFVATF 64
>AL031672-2|CAI43018.1| 1382|Homo sapiens novel protein protein.
Length = 1382
Score = 31.1 bits (67), Expect = 3.6
Identities = 16/48 (33%), Positives = 29/48 (60%), Gaps = 2/48 (4%)
Frame = +1
Query: 481 RIEPKDTSIVEKMNDKHSVLERLSRRDAQRLEK--LQKAHKAREEVDA 618
R E ++ V++M+D HS LE+L+ + + LE+ ++ R EV+A
Sbjct: 409 RAEKRNLEFVKEMDDCHSTLEQLTEKKIKHLEQGYRERLSLLRSEVEA 456
>AB023197-1|BAA76824.1| 1406|Homo sapiens KIAA0980 protein protein.
Length = 1406
Score = 31.1 bits (67), Expect = 3.6
Identities = 16/48 (33%), Positives = 29/48 (60%), Gaps = 2/48 (4%)
Frame = +1
Query: 481 RIEPKDTSIVEKMNDKHSVLERLSRRDAQRLEK--LQKAHKAREEVDA 618
R E ++ V++M+D HS LE+L+ + + LE+ ++ R EV+A
Sbjct: 433 RAEKRNLEFVKEMDDCHSTLEQLTEKKIKHLEQGYRERLSLLRSEVEA 480
>M83216-2|AAA58420.1| 538|Homo sapiens caldesmon protein.
Length = 538
Score = 30.7 bits (66), Expect = 4.8
Identities = 13/32 (40%), Positives = 25/32 (78%)
Frame = +1
Query: 520 NDKHSVLERLSRRDAQRLEKLQKAHKAREEVD 615
+D+ + LERL+RR+ +R ++LQ+A + ++E D
Sbjct: 91 DDEAAFLERLARREERRQKRLQEALERQKEFD 122
>M83216-1|AAA58419.1| 793|Homo sapiens caldesmon protein.
Length = 793
Score = 30.7 bits (66), Expect = 4.8
Identities = 13/32 (40%), Positives = 25/32 (78%)
Frame = +1
Query: 520 NDKHSVLERLSRRDAQRLEKLQKAHKAREEVD 615
+D+ + LERL+RR+ +R ++LQ+A + ++E D
Sbjct: 91 DDEAAFLERLARREERRQKRLQEALERQKEFD 122
>M64110-1|AAA35636.1| 538|Homo sapiens caldesmon protein.
Length = 538
Score = 30.7 bits (66), Expect = 4.8
Identities = 13/32 (40%), Positives = 25/32 (78%)
Frame = +1
Query: 520 NDKHSVLERLSRRDAQRLEKLQKAHKAREEVD 615
+D+ + LERL+RR+ +R ++LQ+A + ++E D
Sbjct: 91 DDEAAFLERLARREERRQKRLQEALERQKEFD 122
>D90453-1|BAA14419.1| 532|Homo sapiens l-caldesmon II protein.
Length = 532
Score = 30.7 bits (66), Expect = 4.8
Identities = 13/32 (40%), Positives = 25/32 (78%)
Frame = +1
Query: 520 NDKHSVLERLSRRDAQRLEKLQKAHKAREEVD 615
+D+ + LERL+RR+ +R ++LQ+A + ++E D
Sbjct: 85 DDEAAFLERLARREERRQKRLQEALERQKEFD 116
>D90452-1|BAA14418.1| 558|Homo sapiens l-caldesmon I protein.
Length = 558
Score = 30.7 bits (66), Expect = 4.8
Identities = 13/32 (40%), Positives = 25/32 (78%)
Frame = +1
Query: 520 NDKHSVLERLSRRDAQRLEKLQKAHKAREEVD 615
+D+ + LERL+RR+ +R ++LQ+A + ++E D
Sbjct: 85 DDEAAFLERLARREERRQKRLQEALERQKEFD 116
>BC061926-1|AAH61926.1| 180|Homo sapiens CALD1 protein protein.
Length = 180
Score = 30.7 bits (66), Expect = 4.8
Identities = 13/32 (40%), Positives = 25/32 (78%)
Frame = +1
Query: 520 NDKHSVLERLSRRDAQRLEKLQKAHKAREEVD 615
+D+ + LERL+RR+ +R ++LQ+A + ++E D
Sbjct: 85 DDEAAFLERLARREERRQKRLQEALERQKEFD 116
>BC040354-1|AAH40354.1| 538|Homo sapiens caldesmon 1 protein.
Length = 538
Score = 30.7 bits (66), Expect = 4.8
Identities = 13/32 (40%), Positives = 25/32 (78%)
Frame = +1
Query: 520 NDKHSVLERLSRRDAQRLEKLQKAHKAREEVD 615
+D+ + LERL+RR+ +R ++LQ+A + ++E D
Sbjct: 91 DDEAAFLERLARREERRQKRLQEALERQKEFD 122
>BC014035-1|AAH14035.1| 314|Homo sapiens CALD1 protein protein.
Length = 314
Score = 30.7 bits (66), Expect = 4.8
Identities = 13/32 (40%), Positives = 25/32 (78%)
Frame = +1
Query: 520 NDKHSVLERLSRRDAQRLEKLQKAHKAREEVD 615
+D+ + LERL+RR+ +R ++LQ+A + ++E D
Sbjct: 85 DDEAAFLERLARREERRQKRLQEALERQKEFD 116
>BC005006-1|AAH05006.1| 153|Homo sapiens Unknown (protein for
IMAGE:3640699) protein.
Length = 153
Score = 30.7 bits (66), Expect = 4.8
Identities = 13/32 (40%), Positives = 25/32 (78%)
Frame = +1
Query: 520 NDKHSVLERLSRRDAQRLEKLQKAHKAREEVD 615
+D+ + LERL+RR+ +R ++LQ+A + ++E D
Sbjct: 85 DDEAAFLERLARREERRQKRLQEALERQKEFD 116
>AF247820-1|AAF69498.3| 481|Homo sapiens NAG22 protein protein.
Length = 481
Score = 30.7 bits (66), Expect = 4.8
Identities = 13/32 (40%), Positives = 25/32 (78%)
Frame = +1
Query: 520 NDKHSVLERLSRRDAQRLEKLQKAHKAREEVD 615
+D+ + LERL+RR+ +R ++LQ+A + ++E D
Sbjct: 91 DDEAAFLERLARREERRQKRLQEALERQKEFD 122
>Z97054-3|CAI42646.1| 1233|Homo sapiens structural maintenance of
chromosomes 1A protein.
Length = 1233
Score = 29.9 bits (64), Expect = 8.4
Identities = 12/50 (24%), Positives = 30/50 (60%)
Frame = +1
Query: 460 RSCQPKFRIEPKDTSIVEKMNDKHSVLERLSRRDAQRLEKLQKAHKAREE 609
+ Q + I+ + ++ +K+N++ SVL+R++ + + +EKL+ +E
Sbjct: 991 KDAQAEEEIKQEMNTLQQKLNEQQSVLQRIAAPNMKAMEKLESVRDKFQE 1040
>S78271-1|AAB34405.1| 1233|Homo sapiens SB1.8/DXS423E protein.
Length = 1233
Score = 29.9 bits (64), Expect = 8.4
Identities = 12/50 (24%), Positives = 30/50 (60%)
Frame = +1
Query: 460 RSCQPKFRIEPKDTSIVEKMNDKHSVLERLSRRDAQRLEKLQKAHKAREE 609
+ Q + I+ + ++ +K+N++ SVL+R++ + + +EKL+ +E
Sbjct: 991 KDAQAEEEIKQEMNTLQQKLNEQQSVLQRIAAPNMKAMEKLESVRDKFQE 1040
>D80000-1|BAA11495.2| 1233|Homo sapiens KIAA0178 protein.
Length = 1233
Score = 29.9 bits (64), Expect = 8.4
Identities = 12/50 (24%), Positives = 30/50 (60%)
Frame = +1
Query: 460 RSCQPKFRIEPKDTSIVEKMNDKHSVLERLSRRDAQRLEKLQKAHKAREE 609
+ Q + I+ + ++ +K+N++ SVL+R++ + + +EKL+ +E
Sbjct: 991 KDAQAEEEIKQEMNTLQQKLNEQQSVLQRIAAPNMKAMEKLESVRDKFQE 1040
>BC112127-1|AAI12128.1| 1233|Homo sapiens SMC1 structural maintenance
of chromosomes 1-like 1 protein.
Length = 1233
Score = 29.9 bits (64), Expect = 8.4
Identities = 12/50 (24%), Positives = 30/50 (60%)
Frame = +1
Query: 460 RSCQPKFRIEPKDTSIVEKMNDKHSVLERLSRRDAQRLEKLQKAHKAREE 609
+ Q + I+ + ++ +K+N++ SVL+R++ + + +EKL+ +E
Sbjct: 991 KDAQAEEEIKQEMNTLQQKLNEQQSVLQRIAAPNMKAMEKLESVRDKFQE 1040
>AL161779-1|CAI42089.1| 1233|Homo sapiens structural maintenance of
chromosomes 1A protein.
Length = 1233
Score = 29.9 bits (64), Expect = 8.4
Identities = 12/50 (24%), Positives = 30/50 (60%)
Frame = +1
Query: 460 RSCQPKFRIEPKDTSIVEKMNDKHSVLERLSRRDAQRLEKLQKAHKAREE 609
+ Q + I+ + ++ +K+N++ SVL+R++ + + +EKL+ +E
Sbjct: 991 KDAQAEEEIKQEMNTLQQKLNEQQSVLQRIAAPNMKAMEKLESVRDKFQE 1040
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 83,075,322
Number of Sequences: 237096
Number of extensions: 1620356
Number of successful extensions: 4168
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 4010
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4166
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7422585720
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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