Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc12h04
         (684 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.    27   0.73 
Z22930-5|CAA80517.1|  275|Anopheles gambiae trypsin protein.           24   3.9  
EF592176-1|ABQ95972.2|  661|Anopheles gambiae laccase-3 protein.       24   3.9  
AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 pro...    24   3.9  
AF378002-1|AAL16724.1|  336|Anopheles gambiae putative transposa...    24   5.1  
DQ974161-1|ABJ52801.1|  409|Anopheles gambiae serpin 2 protein.        23   6.8  

>AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.
          Length = 1201

 Score = 26.6 bits (56), Expect = 0.73
 Identities = 15/54 (27%), Positives = 25/54 (46%)
 Frame = -1

Query: 483 GFQYTMVADAVFFGDRLSILTSCSCLYTSTELNFGNCFLSMYNRSSSVGTYTIK 322
           G +Y  +A+A ++G  +        +YT+ E+  GN        S  VGT  +K
Sbjct: 523 GREYADIANA-YYGPVIENFNCDKSIYTAVEVTAGNRLFHHIVESDRVGTQILK 575


>Z22930-5|CAA80517.1|  275|Anopheles gambiae trypsin protein.
          Length = 275

 Score = 24.2 bits (50), Expect = 3.9
 Identities = 13/39 (33%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
 Frame = +2

Query: 203 IYIAMECPFQIQVCISDRFF-AFPHNLVEPQSDVGNKLI 316
           + +A+ C  Q +V +  R   A P  L  PQ DVG++++
Sbjct: 13  LVVAVACA-QARVALKHRSVQALPRFLPRPQYDVGHRIV 50


>EF592176-1|ABQ95972.2|  661|Anopheles gambiae laccase-3 protein.
          Length = 661

 Score = 24.2 bits (50), Expect = 3.9
 Identities = 10/16 (62%), Positives = 12/16 (75%)
 Frame = +3

Query: 204 YTSRWNARFRFKFVLA 251
           YT R  ARFRF+F+ A
Sbjct: 275 YTVRRGARFRFRFINA 290


>AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 protein.
          Length = 2051

 Score = 24.2 bits (50), Expect = 3.9
 Identities = 11/36 (30%), Positives = 18/36 (50%)
 Frame = +2

Query: 215  MECPFQIQVCISDRFFAFPHNLVEPQSDVGNKLIEN 322
            +E  F  Q+   +RFFAF +  +E    +  K  E+
Sbjct: 1032 LEGQFMFQIFNGERFFAFNNQTIEQFPSLVKKYFED 1067


>AF378002-1|AAL16724.1|  336|Anopheles gambiae putative transposase
           protein.
          Length = 336

 Score = 23.8 bits (49), Expect = 5.1
 Identities = 11/25 (44%), Positives = 13/25 (52%)
 Frame = +3

Query: 207 TSRWNARFRFKFVLAIAFLRFLTIW 281
           T R +   +FKFV A  F R   IW
Sbjct: 166 TGRGDVPAKFKFVFADKFARKFMIW 190


>DQ974161-1|ABJ52801.1|  409|Anopheles gambiae serpin 2 protein.
          Length = 409

 Score = 23.4 bits (48), Expect = 6.8
 Identities = 12/43 (27%), Positives = 20/43 (46%)
 Frame = +2

Query: 302 GNKLIENLIVYVPTDDDRLYIDKKQFPKFNSVLVYRHEHDVNI 430
           GNKL    I+  P +     +D+      +  L Y  E++VN+
Sbjct: 253 GNKLAMYFILPNPDNTVNQVLDRINSASLHQALWYMEENEVNV 295


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 729,673
Number of Sequences: 2352
Number of extensions: 15512
Number of successful extensions: 36
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 68995575
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)