Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc12h03
         (712 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF117201-1|ABL67438.1|  481|Anopheles gambiae serpin 17 protein.       27   0.77 
AY578809-1|AAT07314.1|  358|Anopheles gambiae Sloan-Kettering In...    24   5.4  
AJ439353-1|CAD27923.1| 1127|Anopheles gambiae putative Na-K-Cl s...    24   5.4  
M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles ...    23   9.5  
DQ974169-1|ABJ52809.1|  508|Anopheles gambiae serpin 11 protein.       23   9.5  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    23   9.5  

>EF117201-1|ABL67438.1|  481|Anopheles gambiae serpin 17 protein.
          Length = 481

 Score = 26.6 bits (56), Expect = 0.77
 Identities = 10/34 (29%), Positives = 20/34 (58%)
 Frame = +3

Query: 90  WVDLPYENGAQTLSVIAPKHDSKYDPTLLSASIA 191
           WV+LPYE+ + ++ ++ PK   +   +    S+A
Sbjct: 316 WVELPYESSSLSMVLMLPKMRHQLQQSAQQLSVA 349


>AY578809-1|AAT07314.1|  358|Anopheles gambiae Sloan-Kettering
           Institute proto-oncogeneproduct protein.
          Length = 358

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 11/21 (52%), Positives = 11/21 (52%)
 Frame = +2

Query: 11  GSSNDGTPGPRLP*NPPQWGV 73
           GS  D  P PR P  PP  GV
Sbjct: 81  GSDEDELPQPRQPMGPPVPGV 101


>AJ439353-1|CAD27923.1| 1127|Anopheles gambiae putative Na-K-Cl
            symporter protein.
          Length = 1127

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 10/15 (66%), Positives = 11/15 (73%)
 Frame = +3

Query: 585  SKDRPPNLFVYGGQT 629
            S+D PP LFV G QT
Sbjct: 1106 SRDLPPFLFVRGNQT 1120


>M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 975

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +3

Query: 9   VAALMMEPRDPDSLEIRH 62
           V +  + PRDP S+E RH
Sbjct: 916 VPSRSLRPRDPLSIETRH 933


>DQ974169-1|ABJ52809.1|  508|Anopheles gambiae serpin 11 protein.
          Length = 508

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 7/28 (25%), Positives = 14/28 (50%)
 Frame = +3

Query: 90  WVDLPYENGAQTLSVIAPKHDSKYDPTL 173
           W++LPY+    ++ +  P    + D  L
Sbjct: 340 WIELPYDGDRMSMILFLPNEQFQLDREL 367


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 13/32 (40%), Positives = 17/32 (53%)
 Frame = +2

Query: 38  PRLP*NPPQWGVLQSISMGRSPL*EWRPNPQR 133
           PRL  NPP    +QS  + RS    +RP  +R
Sbjct: 325 PRL--NPPSSNTIQSELLARSGFQPYRPVDER 354


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 837,420
Number of Sequences: 2352
Number of extensions: 17758
Number of successful extensions: 33
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 72758970
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)