Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc12h02
         (681 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT024254-1|ABC86316.1|  199|Drosophila melanogaster IP15861p pro...    33   0.36 
BT025830-1|ABF85730.1|  258|Drosophila melanogaster IP09124p pro...    33   0.48 
AE013599-545|AAF59166.2|  922|Drosophila melanogaster CG14766-PA...    32   0.83 
BT022415-1|AAY54831.1|  189|Drosophila melanogaster IP08052p pro...    29   7.8  
AY928610-1|AAX28843.1|  377|Drosophila melanogaster gag protein ...    29   7.8  
AJ001516-2|CAC79667.1|  373|Drosophila melanogaster gag protein ...    29   7.8  
AE014297-718|AAF54205.4|  227|Drosophila melanogaster CG18228-PA...    29   7.8  

>BT024254-1|ABC86316.1|  199|Drosophila melanogaster IP15861p
           protein.
          Length = 199

 Score = 33.1 bits (72), Expect = 0.36
 Identities = 19/70 (27%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
 Frame = +2

Query: 2   EQQSSTETAAVCKNEKLLNKLESSSYNKSNMDQLIAIVNFLEKKNINYILNVMPVM--QD 175
           +QQ   +     +NE L N +++ + N+  M      ++++ K N+N ++   P M  +D
Sbjct: 135 QQQKQQQEQLQQQNETLSNNIKNFNNNEKIMQ-----LSYITKSNVNSVIK-FPAMSVKD 188

Query: 176 ERKMSKRKKK 205
           ++K++K+KKK
Sbjct: 189 KKKLNKKKKK 198


>BT025830-1|ABF85730.1|  258|Drosophila melanogaster IP09124p
           protein.
          Length = 258

 Score = 32.7 bits (71), Expect = 0.48
 Identities = 19/70 (27%), Positives = 39/70 (55%), Gaps = 2/70 (2%)
 Frame = +2

Query: 2   EQQSSTETAAVCKNEKLLNKLESSSYNKSNMDQLIAIVNFLEKKNINYILNVMPVM--QD 175
           +QQ   +     +NE L N +++ + N+  M      ++++ K N+N ++   P M  +D
Sbjct: 195 QQQKQQQEQLQQQNETLSNNIKNFNNNEKIMQ-----LSYITKSNVNSVIK-FPAMSVKD 248

Query: 176 ERKMSKRKKK 205
           ++K+ K+KKK
Sbjct: 249 KKKLKKKKKK 258


>AE013599-545|AAF59166.2|  922|Drosophila melanogaster CG14766-PA
            protein.
          Length = 922

 Score = 31.9 bits (69), Expect = 0.83
 Identities = 19/70 (27%), Positives = 32/70 (45%), Gaps = 2/70 (2%)
 Frame = +2

Query: 416  PASKKRQTAVLTNANLA--ELKESCEMRDKLYSEFYSLLNETFNNNVAPLLSSIYDEVLT 589
            P S+KR+   +T  N +  E K        LYS +  +++ET  N  +PL    Y   L 
Sbjct: 827  PVSEKRELISITKPNQSDCEAKHRSHKDVNLYSRYPKIISETLENLTSPLRFENYTRELL 886

Query: 590  RDFITKNMAK 619
            + +   ++ K
Sbjct: 887  KAYKALDVTK 896


>BT022415-1|AAY54831.1|  189|Drosophila melanogaster IP08052p
           protein.
          Length = 189

 Score = 28.7 bits (61), Expect = 7.8
 Identities = 17/67 (25%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
 Frame = +2

Query: 110 IVNFLEKKNINYILNVMPVMQDERKMSKRKKKVINNNKYILFNSWYTKIK-QPEWPSSPA 286
           I+N  +K+ +N++       +D+  + K  +  ++NN+  L  SWYT ++  P+ P +  
Sbjct: 127 ILNLWQKEAVNFV-----GQRDDVIVVKGARAQLHNNEMKLNASWYTNMQINPDIPDATG 181

Query: 287 MWDLVKN 307
           M +   N
Sbjct: 182 MLEWYNN 188


>AY928610-1|AAX28843.1|  377|Drosophila melanogaster gag protein
           protein.
          Length = 377

 Score = 28.7 bits (61), Expect = 7.8
 Identities = 21/59 (35%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
 Frame = +2

Query: 497 KLYSEFYSLL-NETFNNNVAPLLSSIYDEVLTRDFITKNMAKFKT-VALKLPVAPSTTE 667
           K+ S+ +S+L N   NN V      +Y+EV    F+T      KT V +K   +PST E
Sbjct: 197 KVRSQLFSILKNSEHNNTVVDAKKVVYNEVCLNAFMTGLKEPLKTFVRIK---SPSTLE 252


>AJ001516-2|CAC79667.1|  373|Drosophila melanogaster gag protein
           protein.
          Length = 373

 Score = 28.7 bits (61), Expect = 7.8
 Identities = 21/59 (35%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
 Frame = +2

Query: 497 KLYSEFYSLL-NETFNNNVAPLLSSIYDEVLTRDFITKNMAKFKT-VALKLPVAPSTTE 667
           K+ S+ +S+L N   NN V      +Y+EV    F+T      KT V +K   +PST E
Sbjct: 197 KVRSQLFSILKNSEHNNTVVDAKKVVYNEVCLNAFMTGLKEPLKTFVRIK---SPSTLE 252


>AE014297-718|AAF54205.4|  227|Drosophila melanogaster CG18228-PA
           protein.
          Length = 227

 Score = 28.7 bits (61), Expect = 7.8
 Identities = 17/67 (25%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
 Frame = +2

Query: 110 IVNFLEKKNINYILNVMPVMQDERKMSKRKKKVINNNKYILFNSWYTKIK-QPEWPSSPA 286
           I+N  +K+ +N++       +D+  + K  +  ++NN+  L  SWYT ++  P+ P +  
Sbjct: 165 ILNLWQKEAVNFV-----GQRDDVIVVKGARAQLHNNEMKLNASWYTNMQINPDIPDATG 219

Query: 287 MWDLVKN 307
           M +   N
Sbjct: 220 MLEWYNN 226


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,141,790
Number of Sequences: 53049
Number of extensions: 628515
Number of successful extensions: 1767
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1683
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1767
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2971922400
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)