Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc12h01
(689 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF145691-1|AAD38666.1| 306|Drosophila melanogaster BcDNA.LD2988... 125 5e-29
AE014134-1103|AAF52392.1| 306|Drosophila melanogaster CG9543-PA... 125 5e-29
AY051440-1|AAK92864.1| 570|Drosophila melanogaster GH11140p pro... 33 0.37
AE014297-2075|AAF55219.1| 570|Drosophila melanogaster CG4525-PA... 33 0.37
L42511-1|AAC41607.1| 224|Drosophila melanogaster shortsighted c... 31 1.1
AF003342-1|AAB61239.1| 225|Drosophila melanogaster bunched prot... 31 1.1
AE014134-2215|AAF53200.2| 219|Drosophila melanogaster CG5461-PB... 31 1.1
>AF145691-1|AAD38666.1| 306|Drosophila melanogaster BcDNA.LD29885
protein.
Length = 306
Score = 125 bits (302), Expect = 5e-29
Identities = 73/206 (35%), Positives = 116/206 (56%), Gaps = 4/206 (1%)
Frame = +1
Query: 16 MARHQQDVDE---LFDVKNAFYVGNYQQAINEAQSVSPSTPLVALQRDAFLYRSYIAQGN 186
M+R Q + D LFD +N +Y+GN+ +IN V P + +++Y SY+A +
Sbjct: 1 MSRQQNEEDTNSVLFDARNEYYIGNFMGSIN---FVLPEQGTAGPELLSYMYLSYLAIDS 57
Query: 187 YRIVQQELKTADPM-LQPLKSLVDYLLPDANKSAIVADIDARVAKGTELSNEIFLIVAAT 363
RIV ++K + LQ L+ + + + ++ + +VA G E I+ + A
Sbjct: 58 GRIVASDIKEGNSTPLQALRLVHEAFEQPSRTEELLEKLTDKVA-GEEDETNIWHLATAI 116
Query: 364 IYYHEDNYEAALKILHNAESLELRAFTLQCLLAMNRPDLARKQLKLLQDIEDDGTLTQLA 543
+Y H+ +E ALKILH + +LE A ++QCLL + R DLA++ + +Q+I DD TLTQLA
Sbjct: 117 VYCHDGQFENALKILHGSTNLESMALSVQCLLRLQRVDLAKQLVAKMQEISDDATLTQLA 176
Query: 544 QAWLNLIQGGPGIQDAHYSVMELSER 621
QAW+ L QG +QDA + E E+
Sbjct: 177 QAWVALAQGTEQMQDAFHIYQEFCEK 202
>AE014134-1103|AAF52392.1| 306|Drosophila melanogaster CG9543-PA
protein.
Length = 306
Score = 125 bits (302), Expect = 5e-29
Identities = 73/206 (35%), Positives = 116/206 (56%), Gaps = 4/206 (1%)
Frame = +1
Query: 16 MARHQQDVDE---LFDVKNAFYVGNYQQAINEAQSVSPSTPLVALQRDAFLYRSYIAQGN 186
M+R Q + D LFD +N +Y+GN+ +IN V P + +++Y SY+A +
Sbjct: 1 MSRQQNEEDTNSVLFDARNEYYIGNFMGSIN---FVLPEQGTAGPELLSYMYLSYLAIDS 57
Query: 187 YRIVQQELKTADPM-LQPLKSLVDYLLPDANKSAIVADIDARVAKGTELSNEIFLIVAAT 363
RIV ++K + LQ L+ + + + ++ + +VA G E I+ + A
Sbjct: 58 GRIVASDIKEGNSTPLQALRLVHEAFEQPSRTEELLEKLTDKVA-GEEDETNIWHLATAI 116
Query: 364 IYYHEDNYEAALKILHNAESLELRAFTLQCLLAMNRPDLARKQLKLLQDIEDDGTLTQLA 543
+Y H+ +E ALKILH + +LE A ++QCLL + R DLA++ + +Q+I DD TLTQLA
Sbjct: 117 VYCHDGQFENALKILHGSTNLESMALSVQCLLRLQRVDLAKQLVAKMQEISDDATLTQLA 176
Query: 544 QAWLNLIQGGPGIQDAHYSVMELSER 621
QAW+ L QG +QDA + E E+
Sbjct: 177 QAWVALAQGTEQMQDAFHIYQEFCEK 202
>AY051440-1|AAK92864.1| 570|Drosophila melanogaster GH11140p
protein.
Length = 570
Score = 33.1 bits (72), Expect = 0.37
Identities = 38/176 (21%), Positives = 77/176 (43%), Gaps = 8/176 (4%)
Frame = +1
Query: 28 QQDVDELFDVKNAFYVGNYQQAINEAQSV--SPSTPLVALQRDAFLYRSYIAQGNYRIVQ 201
Q VD+ N F++G+YQQA+ + +++ STP L + + Y+ G Y Q
Sbjct: 73 QSQVDQWIAFCN-FHLGDYQQALAQYKAIQQGSSTPDGKLDLNLAVCMFYL--GLYEEAQ 129
Query: 202 QELKTADPMLQPLKS-LVDYLLPDANKSAIVADIDARVAKGTELSNEIFLIVAATIYYHE 378
Q + A PLK L+ +L + + + + L ++ L A+++Y
Sbjct: 130 QLMANAAD--NPLKQRLLFHLAHKLGNEEEWSQLQEELQDSSSLEQQLSL---ASMHYMR 184
Query: 379 DNYEAALKI-----LHNAESLELRAFTLQCLLAMNRPDLARKQLKLLQDIEDDGTL 531
+Y+ A+ + + N E + + C ++ D++++ L + D T+
Sbjct: 185 AHYQEAIDVYKRVLVDNKEYQAINVYLALCFYKLDYYDMSQEVLDVYLSQHGDSTI 240
>AE014297-2075|AAF55219.1| 570|Drosophila melanogaster CG4525-PA
protein.
Length = 570
Score = 33.1 bits (72), Expect = 0.37
Identities = 38/176 (21%), Positives = 77/176 (43%), Gaps = 8/176 (4%)
Frame = +1
Query: 28 QQDVDELFDVKNAFYVGNYQQAINEAQSV--SPSTPLVALQRDAFLYRSYIAQGNYRIVQ 201
Q VD+ N F++G+YQQA+ + +++ STP L + + Y+ G Y Q
Sbjct: 73 QSQVDQWIAFCN-FHLGDYQQALAQYKAIQQGSSTPDGKLDLNLAVCMFYL--GLYEEAQ 129
Query: 202 QELKTADPMLQPLKS-LVDYLLPDANKSAIVADIDARVAKGTELSNEIFLIVAATIYYHE 378
Q + A PLK L+ +L + + + + L ++ L A+++Y
Sbjct: 130 QLMANAAD--NPLKQRLLFHLAHKLGNEEEWSQLQEELQDSSSLEQQLSL---ASMHYMR 184
Query: 379 DNYEAALKI-----LHNAESLELRAFTLQCLLAMNRPDLARKQLKLLQDIEDDGTL 531
+Y+ A+ + + N E + + C ++ D++++ L + D T+
Sbjct: 185 AHYQEAIDVYKRVLVDNKEYQAINVYLALCFYKLDYYDMSQEVLDVYLSQHGDSTI 240
>L42511-1|AAC41607.1| 224|Drosophila melanogaster shortsighted
class 1 protein.
Length = 224
Score = 31.5 bits (68), Expect = 1.1
Identities = 27/97 (27%), Positives = 45/97 (46%)
Frame = +1
Query: 211 KTADPMLQPLKSLVDYLLPDANKSAIVADIDARVAKGTELSNEIFLIVAATIYYHEDNYE 390
K DP+ + + +DY LPDA+ ++ VA ID ++ + +L +I A E E
Sbjct: 28 KQQDPVREVVMKYIDYFLPDASGTSAVA-IDNKIEQAMDLVKSHLMI--AVREEVEVLKE 84
Query: 391 AALKILHNAESLELRAFTLQCLLAMNRPDLARKQLKL 501
+++ LEL +L N P +QL+L
Sbjct: 85 RISELMDKINKLELE----NSILKSNIPQETLQQLQL 117
>AF003342-1|AAB61239.1| 225|Drosophila melanogaster bunched
protein.
Length = 225
Score = 31.5 bits (68), Expect = 1.1
Identities = 15/47 (31%), Positives = 27/47 (57%)
Frame = +1
Query: 211 KTADPMLQPLKSLVDYLLPDANKSAIVADIDARVAKGTELSNEIFLI 351
K DP+ + + +DY LPDA+ ++ VA ID ++ + +L +I
Sbjct: 29 KQEDPVCEVVMKYIDYFLPDASGTSAVA-IDNKIEQAMDLVKSHLMI 74
>AE014134-2215|AAF53200.2| 219|Drosophila melanogaster CG5461-PB,
isoform B protein.
Length = 219
Score = 31.5 bits (68), Expect = 1.1
Identities = 27/97 (27%), Positives = 45/97 (46%)
Frame = +1
Query: 211 KTADPMLQPLKSLVDYLLPDANKSAIVADIDARVAKGTELSNEIFLIVAATIYYHEDNYE 390
K DP+ + + +DY LPDA+ ++ VA ID ++ + +L +I A E E
Sbjct: 28 KQQDPVREVVMKYIDYFLPDASGTSAVA-IDNKIEQAMDLVKSHLMI--AVREEVEVLKE 84
Query: 391 AALKILHNAESLELRAFTLQCLLAMNRPDLARKQLKL 501
+++ LEL +L N P +QL+L
Sbjct: 85 RISELMDKINKLELE----NSILKSNIPQETLQQLQL 117
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,829,455
Number of Sequences: 53049
Number of extensions: 577942
Number of successful extensions: 1574
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1513
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1570
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3005453946
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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