Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc12g18
         (725 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014298-759|AAF46049.3|  857|Drosophila melanogaster CG32763-PA...   219   2e-57
AF132176-1|AAD34764.1|  797|Drosophila melanogaster unknown prot...   184   1e-46
AE014298-1847|AAF48227.2|  320|Drosophila melanogaster CG12714-P...    33   0.52 

>AE014298-759|AAF46049.3|  857|Drosophila melanogaster CG32763-PA
           protein.
          Length = 857

 Score =  219 bits (536), Expect = 2e-57
 Identities = 101/181 (55%), Positives = 126/181 (69%), Gaps = 3/181 (1%)
 Frame = +3

Query: 192 EAAEFDATLGGTEQLPFSANSLKFAASRSIEIAAMTESIQRTNH--NKLIFQNLPVHMRR 365
           +  E+DA LGG   LP    +  +AA    EI  +    Q T    +KLIFQ LP HMRR
Sbjct: 4   QKVEYDAALGGRVTLPSHVTTYHYAAEALQEIRNLVADCQETTQRSSKLIFQTLPKHMRR 63

Query: 366 RVMSHNSKRLPIKLREAHTKQF-KNNGFAVKQKRPSRKYRRRPQNLLDEYNRRQKRHKWL 542
           R MSH+ KRLP K R+AH  Q  K+    V  KRPSRKYRRRP+NL+ EY RRQ+RH WL
Sbjct: 64  RAMSHHPKRLPRKYRQAHKSQMGKSGNQPVNGKRPSRKYRRRPKNLMREYVRRQRRHVWL 123

Query: 543 ETHIWHAKRFHMIEKWGYRLAYAPCDKAFRACYRATSAHCLLQDISYVTPIEINGPVDTI 722
           ETHIWHAKRFHM+++WG+RL YA CDK +RACYRA++ HCLLQDIS+   +E+ GP+D +
Sbjct: 124 ETHIWHAKRFHMVDRWGHRLPYASCDKTYRACYRASAEHCLLQDISFYGCVELRGPLDML 183

Query: 723 K 725
           +
Sbjct: 184 R 184


>AF132176-1|AAD34764.1|  797|Drosophila melanogaster unknown
           protein.
          Length = 797

 Score =  184 bits (448), Expect = 1e-46
 Identities = 79/124 (63%), Positives = 98/124 (79%), Gaps = 1/124 (0%)
 Frame = +3

Query: 357 MRRRVMSHNSKRLPIKLREAHTKQF-KNNGFAVKQKRPSRKYRRRPQNLLDEYNRRQKRH 533
           MRRR MSH+ KRLP K R+AH  Q  K+    V  KRPSRKYRRRP+NL+ EY RRQ+RH
Sbjct: 1   MRRRAMSHHPKRLPRKYRQAHKSQMGKSGNQPVNGKRPSRKYRRRPKNLMREYVRRQRRH 60

Query: 534 KWLETHIWHAKRFHMIEKWGYRLAYAPCDKAFRACYRATSAHCLLQDISYVTPIEINGPV 713
            WLETHIWHAKRFHM+++WG+RL YA CDK +RACYRA++ HCLLQDIS+   +E+ GP+
Sbjct: 61  VWLETHIWHAKRFHMVDRWGHRLPYASCDKTYRACYRASAEHCLLQDISFYGCVELRGPL 120

Query: 714 DTIK 725
           D ++
Sbjct: 121 DMLR 124


>AE014298-1847|AAF48227.2|  320|Drosophila melanogaster CG12714-PB
           protein.
          Length = 320

 Score = 32.7 bits (71), Expect = 0.52
 Identities = 19/76 (25%), Positives = 35/76 (46%)
 Frame = +3

Query: 309 QRTNHNKLIFQNLPVHMRRRVMSHNSKRLPIKLREAHTKQFKNNGFAVKQKRPSRKYRRR 488
           Q  N+ K + Q   +  RR+V    + +     R+ HTK+ +       ++  + K  RR
Sbjct: 57  QSENNGKQLLQCQRLRSRRKVTVEQAIKNGFTRRKRHTKRSEEGAKRAAKEVRAEKRERR 116

Query: 489 PQNLLDEYNRRQKRHK 536
               + + NR QK++K
Sbjct: 117 KVPKIKQQNRNQKKNK 132


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,877,833
Number of Sequences: 53049
Number of extensions: 558382
Number of successful extensions: 1319
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1244
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1311
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3252477558
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)