Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc12g12
(709 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC130418-1|AAI30419.1| 1153|Homo sapiens ARID4B protein protein. 178 1e-44
BC104632-1|AAI04633.1| 432|Homo sapiens ARID4B protein protein. 178 1e-44
BC062536-1|AAH62536.1| 428|Homo sapiens ARID4B protein protein. 178 1e-44
BC048959-1|AAH48959.1| 569|Homo sapiens ARID4B protein protein. 178 1e-44
AL391994-7|CAI13752.1| 1071|Homo sapiens AT rich interactive dom... 178 1e-44
AL391994-6|CAI13751.1| 1226|Homo sapiens AT rich interactive dom... 178 1e-44
AL391994-5|CAI13750.1| 304|Homo sapiens AT rich interactive dom... 178 1e-44
AL391994-4|CAI13749.1| 483|Homo sapiens AT rich interactive dom... 178 1e-44
AL391994-2|CAI13747.1| 1310|Homo sapiens AT rich interactive dom... 178 1e-44
AL133418-7|CAI22963.1| 1071|Homo sapiens AT rich interactive dom... 178 1e-44
AL133418-6|CAI22962.1| 1226|Homo sapiens AT rich interactive dom... 178 1e-44
AL133418-5|CAI22961.1| 1310|Homo sapiens AT rich interactive dom... 178 1e-44
AF214114-1|AAF28341.2| 1226|Homo sapiens retinoblastoma-binding ... 178 1e-44
AF208045-1|AAF23433.3| 1213|Homo sapiens breast cancer-associate... 178 1e-44
AB210032-1|BAE06114.1| 1325|Homo sapiens ARID4B variant protein ... 178 1e-44
S66427-1|AAB28543.1| 1257|Homo sapiens retinoblastoma binding pr... 174 3e-43
BC026230-1|AAH26230.1| 424|Homo sapiens ARID4A protein protein. 174 3e-43
AY220790-1|AAO63590.1| 1312|Homo sapiens SIN3A-associated protei... 174 3e-43
>BC130418-1|AAI30419.1| 1153|Homo sapiens ARID4B protein protein.
Length = 1153
Score = 178 bits (434), Expect = 1e-44
Identities = 94/176 (53%), Positives = 115/176 (65%), Gaps = 2/176 (1%)
Frame = +1
Query: 187 DDPPYLPVGTDVSAKYKGAFCEAKIKKVVRNIKCKVTLKAGGGTITVNDDVIKGTLRIGS 366
D+PPYL VGTDVSAKY+GAFCEAKIK R +K KVT + T+ V DD IKG L++G+
Sbjct: 5 DEPPYLTVGTDVSAKYRGAFCEAKIKTAKRLVKVKVTFRHDSSTVEVQDDHIKGPLKVGA 64
Query: 367 TVEVKQDPKKDAMEAVITKIQDCSQYTVVFDDGDITTLRRSALCLKSGRHFNESETLDQL 546
VEVK + EAVI K+ D S YTVVFDDGD TLRRS+LCLK RHF ESETLDQL
Sbjct: 65 IVEVK-NLDGAYQEAVINKLTDASWYTVVFDDGDEKTLRRSSLCLKGERHFAESETLDQL 123
Query: 547 PLTHPEHFSTPVIAXXXXXXXXAQ--SDDSEGEGTSRPVKADSAEREPHVGRVVLV 708
PLT+PEHF TPVI + ++ +S + D + + +G+VV V
Sbjct: 124 PLTNPEHFGTPVIGKKTNRGRRSNHIPEEESSSSSSDEDEDDRKQIDELLGKVVCV 179
>BC104632-1|AAI04633.1| 432|Homo sapiens ARID4B protein protein.
Length = 432
Score = 178 bits (434), Expect = 1e-44
Identities = 94/176 (53%), Positives = 115/176 (65%), Gaps = 2/176 (1%)
Frame = +1
Query: 187 DDPPYLPVGTDVSAKYKGAFCEAKIKKVVRNIKCKVTLKAGGGTITVNDDVIKGTLRIGS 366
D+PPYL VGTDVSAKY+GAFCEAKIK R +K KVT + T+ V DD IKG L++G+
Sbjct: 5 DEPPYLTVGTDVSAKYRGAFCEAKIKTAKRLVKVKVTFRHDSSTVEVQDDHIKGPLKVGA 64
Query: 367 TVEVKQDPKKDAMEAVITKIQDCSQYTVVFDDGDITTLRRSALCLKSGRHFNESETLDQL 546
VEVK + EAVI K+ D S YTVVFDDGD TLRRS+LCLK RHF ESETLDQL
Sbjct: 65 IVEVK-NLDGAYQEAVINKLTDASWYTVVFDDGDEKTLRRSSLCLKGERHFAESETLDQL 123
Query: 547 PLTHPEHFSTPVIAXXXXXXXXAQ--SDDSEGEGTSRPVKADSAEREPHVGRVVLV 708
PLT+PEHF TPVI + ++ +S + D + + +G+VV V
Sbjct: 124 PLTNPEHFGTPVIGKKTNRGRRSNHIPEEESSSSSSDEDEDDRKQIDELLGKVVCV 179
>BC062536-1|AAH62536.1| 428|Homo sapiens ARID4B protein protein.
Length = 428
Score = 178 bits (434), Expect = 1e-44
Identities = 94/176 (53%), Positives = 115/176 (65%), Gaps = 2/176 (1%)
Frame = +1
Query: 187 DDPPYLPVGTDVSAKYKGAFCEAKIKKVVRNIKCKVTLKAGGGTITVNDDVIKGTLRIGS 366
D+PPYL VGTDVSAKY+GAFCEAKIK R +K KVT + T+ V DD IKG L++G+
Sbjct: 5 DEPPYLTVGTDVSAKYRGAFCEAKIKTAKRLVKVKVTFRHDSSTVEVQDDHIKGPLKVGA 64
Query: 367 TVEVKQDPKKDAMEAVITKIQDCSQYTVVFDDGDITTLRRSALCLKSGRHFNESETLDQL 546
VEVK + EAVI K+ D S YTVVFDDGD TLRRS+LCLK RHF ESETLDQL
Sbjct: 65 IVEVK-NLDGAYQEAVINKLTDASWYTVVFDDGDEKTLRRSSLCLKGERHFAESETLDQL 123
Query: 547 PLTHPEHFSTPVIAXXXXXXXXAQ--SDDSEGEGTSRPVKADSAEREPHVGRVVLV 708
PLT+PEHF TPVI + ++ +S + D + + +G+VV V
Sbjct: 124 PLTNPEHFGTPVIGKKTNRGRRSNHIPEEESSSSSSDEDEDDRKQIDELLGKVVCV 179
>BC048959-1|AAH48959.1| 569|Homo sapiens ARID4B protein protein.
Length = 569
Score = 178 bits (434), Expect = 1e-44
Identities = 94/176 (53%), Positives = 115/176 (65%), Gaps = 2/176 (1%)
Frame = +1
Query: 187 DDPPYLPVGTDVSAKYKGAFCEAKIKKVVRNIKCKVTLKAGGGTITVNDDVIKGTLRIGS 366
D+PPYL VGTDVSAKY+GAFCEAKIK R +K KVT + T+ V DD IKG L++G+
Sbjct: 5 DEPPYLTVGTDVSAKYRGAFCEAKIKTAKRLVKVKVTFRHDSSTVEVQDDHIKGPLKVGA 64
Query: 367 TVEVKQDPKKDAMEAVITKIQDCSQYTVVFDDGDITTLRRSALCLKSGRHFNESETLDQL 546
VEVK + EAVI K+ D S YTVVFDDGD TLRRS+LCLK RHF ESETLDQL
Sbjct: 65 IVEVK-NLDGAYQEAVINKLTDASWYTVVFDDGDEKTLRRSSLCLKGERHFAESETLDQL 123
Query: 547 PLTHPEHFSTPVIAXXXXXXXXAQ--SDDSEGEGTSRPVKADSAEREPHVGRVVLV 708
PLT+PEHF TPVI + ++ +S + D + + +G+VV V
Sbjct: 124 PLTNPEHFGTPVIGKKTNRGRRSNHIPEEESSSSSSDEDEDDRKQIDELLGKVVCV 179
>AL391994-7|CAI13752.1| 1071|Homo sapiens AT rich interactive domain
4B (RBP1-like) protein.
Length = 1071
Score = 178 bits (434), Expect = 1e-44
Identities = 94/176 (53%), Positives = 115/176 (65%), Gaps = 2/176 (1%)
Frame = +1
Query: 187 DDPPYLPVGTDVSAKYKGAFCEAKIKKVVRNIKCKVTLKAGGGTITVNDDVIKGTLRIGS 366
D+PPYL VGTDVSAKY+GAFCEAKIK R +K KVT + T+ V DD IKG L++G+
Sbjct: 5 DEPPYLTVGTDVSAKYRGAFCEAKIKTAKRLVKVKVTFRHDSSTVEVQDDHIKGPLKVGA 64
Query: 367 TVEVKQDPKKDAMEAVITKIQDCSQYTVVFDDGDITTLRRSALCLKSGRHFNESETLDQL 546
VEVK + EAVI K+ D S YTVVFDDGD TLRRS+LCLK RHF ESETLDQL
Sbjct: 65 IVEVK-NLDGAYQEAVINKLTDASWYTVVFDDGDEKTLRRSSLCLKGERHFAESETLDQL 123
Query: 547 PLTHPEHFSTPVIAXXXXXXXXAQ--SDDSEGEGTSRPVKADSAEREPHVGRVVLV 708
PLT+PEHF TPVI + ++ +S + D + + +G+VV V
Sbjct: 124 PLTNPEHFGTPVIGKKTNRGRRSNHIPEEESSSSSSDEDEDDRKQIDELLGKVVCV 179
>AL391994-6|CAI13751.1| 1226|Homo sapiens AT rich interactive domain
4B (RBP1-like) protein.
Length = 1226
Score = 178 bits (434), Expect = 1e-44
Identities = 94/176 (53%), Positives = 115/176 (65%), Gaps = 2/176 (1%)
Frame = +1
Query: 187 DDPPYLPVGTDVSAKYKGAFCEAKIKKVVRNIKCKVTLKAGGGTITVNDDVIKGTLRIGS 366
D+PPYL VGTDVSAKY+GAFCEAKIK R +K KVT + T+ V DD IKG L++G+
Sbjct: 5 DEPPYLTVGTDVSAKYRGAFCEAKIKTAKRLVKVKVTFRHDSSTVEVQDDHIKGPLKVGA 64
Query: 367 TVEVKQDPKKDAMEAVITKIQDCSQYTVVFDDGDITTLRRSALCLKSGRHFNESETLDQL 546
VEVK + EAVI K+ D S YTVVFDDGD TLRRS+LCLK RHF ESETLDQL
Sbjct: 65 IVEVK-NLDGAYQEAVINKLTDASWYTVVFDDGDEKTLRRSSLCLKGERHFAESETLDQL 123
Query: 547 PLTHPEHFSTPVIAXXXXXXXXAQ--SDDSEGEGTSRPVKADSAEREPHVGRVVLV 708
PLT+PEHF TPVI + ++ +S + D + + +G+VV V
Sbjct: 124 PLTNPEHFGTPVIGKKTNRGRRSNHIPEEESSSSSSDEDEDDRKQIDELLGKVVCV 179
>AL391994-5|CAI13750.1| 304|Homo sapiens AT rich interactive domain
4B (RBP1-like) protein.
Length = 304
Score = 178 bits (434), Expect = 1e-44
Identities = 94/176 (53%), Positives = 115/176 (65%), Gaps = 2/176 (1%)
Frame = +1
Query: 187 DDPPYLPVGTDVSAKYKGAFCEAKIKKVVRNIKCKVTLKAGGGTITVNDDVIKGTLRIGS 366
D+PPYL VGTDVSAKY+GAFCEAKIK R +K KVT + T+ V DD IKG L++G+
Sbjct: 5 DEPPYLTVGTDVSAKYRGAFCEAKIKTAKRLVKVKVTFRHDSSTVEVQDDHIKGPLKVGA 64
Query: 367 TVEVKQDPKKDAMEAVITKIQDCSQYTVVFDDGDITTLRRSALCLKSGRHFNESETLDQL 546
VEVK + EAVI K+ D S YTVVFDDGD TLRRS+LCLK RHF ESETLDQL
Sbjct: 65 IVEVK-NLDGAYQEAVINKLTDASWYTVVFDDGDEKTLRRSSLCLKGERHFAESETLDQL 123
Query: 547 PLTHPEHFSTPVIAXXXXXXXXAQ--SDDSEGEGTSRPVKADSAEREPHVGRVVLV 708
PLT+PEHF TPVI + ++ +S + D + + +G+VV V
Sbjct: 124 PLTNPEHFGTPVIGKKTNRGRRSNHIPEEESSSSSSDEDEDDRKQIDELLGKVVCV 179
>AL391994-4|CAI13749.1| 483|Homo sapiens AT rich interactive domain
4B (RBP1-like) protein.
Length = 483
Score = 178 bits (434), Expect = 1e-44
Identities = 94/176 (53%), Positives = 115/176 (65%), Gaps = 2/176 (1%)
Frame = +1
Query: 187 DDPPYLPVGTDVSAKYKGAFCEAKIKKVVRNIKCKVTLKAGGGTITVNDDVIKGTLRIGS 366
D+PPYL VGTDVSAKY+GAFCEAKIK R +K KVT + T+ V DD IKG L++G+
Sbjct: 5 DEPPYLTVGTDVSAKYRGAFCEAKIKTAKRLVKVKVTFRHDSSTVEVQDDHIKGPLKVGA 64
Query: 367 TVEVKQDPKKDAMEAVITKIQDCSQYTVVFDDGDITTLRRSALCLKSGRHFNESETLDQL 546
VEVK + EAVI K+ D S YTVVFDDGD TLRRS+LCLK RHF ESETLDQL
Sbjct: 65 IVEVK-NLDGAYQEAVINKLTDASWYTVVFDDGDEKTLRRSSLCLKGERHFAESETLDQL 123
Query: 547 PLTHPEHFSTPVIAXXXXXXXXAQ--SDDSEGEGTSRPVKADSAEREPHVGRVVLV 708
PLT+PEHF TPVI + ++ +S + D + + +G+VV V
Sbjct: 124 PLTNPEHFGTPVIGKKTNRGRRSNHIPEEESSSSSSDEDEDDRKQIDELLGKVVCV 179
>AL391994-2|CAI13747.1| 1310|Homo sapiens AT rich interactive domain
4B (RBP1-like) protein.
Length = 1310
Score = 178 bits (434), Expect = 1e-44
Identities = 94/176 (53%), Positives = 115/176 (65%), Gaps = 2/176 (1%)
Frame = +1
Query: 187 DDPPYLPVGTDVSAKYKGAFCEAKIKKVVRNIKCKVTLKAGGGTITVNDDVIKGTLRIGS 366
D+PPYL VGTDVSAKY+GAFCEAKIK R +K KVT + T+ V DD IKG L++G+
Sbjct: 3 DEPPYLTVGTDVSAKYRGAFCEAKIKTAKRLVKVKVTFRHDSSTVEVQDDHIKGPLKVGA 62
Query: 367 TVEVKQDPKKDAMEAVITKIQDCSQYTVVFDDGDITTLRRSALCLKSGRHFNESETLDQL 546
VEVK + EAVI K+ D S YTVVFDDGD TLRRS+LCLK RHF ESETLDQL
Sbjct: 63 IVEVK-NLDGAYQEAVINKLTDASWYTVVFDDGDEKTLRRSSLCLKGERHFAESETLDQL 121
Query: 547 PLTHPEHFSTPVIAXXXXXXXXAQ--SDDSEGEGTSRPVKADSAEREPHVGRVVLV 708
PLT+PEHF TPVI + ++ +S + D + + +G+VV V
Sbjct: 122 PLTNPEHFGTPVIGKKTNRGRRSNHIPEEESSSSSSDEDEDDRKQIDELLGKVVCV 177
>AL133418-7|CAI22963.1| 1071|Homo sapiens AT rich interactive domain
4B (RBP1-like) protein.
Length = 1071
Score = 178 bits (434), Expect = 1e-44
Identities = 94/176 (53%), Positives = 115/176 (65%), Gaps = 2/176 (1%)
Frame = +1
Query: 187 DDPPYLPVGTDVSAKYKGAFCEAKIKKVVRNIKCKVTLKAGGGTITVNDDVIKGTLRIGS 366
D+PPYL VGTDVSAKY+GAFCEAKIK R +K KVT + T+ V DD IKG L++G+
Sbjct: 5 DEPPYLTVGTDVSAKYRGAFCEAKIKTAKRLVKVKVTFRHDSSTVEVQDDHIKGPLKVGA 64
Query: 367 TVEVKQDPKKDAMEAVITKIQDCSQYTVVFDDGDITTLRRSALCLKSGRHFNESETLDQL 546
VEVK + EAVI K+ D S YTVVFDDGD TLRRS+LCLK RHF ESETLDQL
Sbjct: 65 IVEVK-NLDGAYQEAVINKLTDASWYTVVFDDGDEKTLRRSSLCLKGERHFAESETLDQL 123
Query: 547 PLTHPEHFSTPVIAXXXXXXXXAQ--SDDSEGEGTSRPVKADSAEREPHVGRVVLV 708
PLT+PEHF TPVI + ++ +S + D + + +G+VV V
Sbjct: 124 PLTNPEHFGTPVIGKKTNRGRRSNHIPEEESSSSSSDEDEDDRKQIDELLGKVVCV 179
>AL133418-6|CAI22962.1| 1226|Homo sapiens AT rich interactive domain
4B (RBP1-like) protein.
Length = 1226
Score = 178 bits (434), Expect = 1e-44
Identities = 94/176 (53%), Positives = 115/176 (65%), Gaps = 2/176 (1%)
Frame = +1
Query: 187 DDPPYLPVGTDVSAKYKGAFCEAKIKKVVRNIKCKVTLKAGGGTITVNDDVIKGTLRIGS 366
D+PPYL VGTDVSAKY+GAFCEAKIK R +K KVT + T+ V DD IKG L++G+
Sbjct: 5 DEPPYLTVGTDVSAKYRGAFCEAKIKTAKRLVKVKVTFRHDSSTVEVQDDHIKGPLKVGA 64
Query: 367 TVEVKQDPKKDAMEAVITKIQDCSQYTVVFDDGDITTLRRSALCLKSGRHFNESETLDQL 546
VEVK + EAVI K+ D S YTVVFDDGD TLRRS+LCLK RHF ESETLDQL
Sbjct: 65 IVEVK-NLDGAYQEAVINKLTDASWYTVVFDDGDEKTLRRSSLCLKGERHFAESETLDQL 123
Query: 547 PLTHPEHFSTPVIAXXXXXXXXAQ--SDDSEGEGTSRPVKADSAEREPHVGRVVLV 708
PLT+PEHF TPVI + ++ +S + D + + +G+VV V
Sbjct: 124 PLTNPEHFGTPVIGKKTNRGRRSNHIPEEESSSSSSDEDEDDRKQIDELLGKVVCV 179
>AL133418-5|CAI22961.1| 1310|Homo sapiens AT rich interactive domain
4B (RBP1-like) protein.
Length = 1310
Score = 178 bits (434), Expect = 1e-44
Identities = 94/176 (53%), Positives = 115/176 (65%), Gaps = 2/176 (1%)
Frame = +1
Query: 187 DDPPYLPVGTDVSAKYKGAFCEAKIKKVVRNIKCKVTLKAGGGTITVNDDVIKGTLRIGS 366
D+PPYL VGTDVSAKY+GAFCEAKIK R +K KVT + T+ V DD IKG L++G+
Sbjct: 3 DEPPYLTVGTDVSAKYRGAFCEAKIKTAKRLVKVKVTFRHDSSTVEVQDDHIKGPLKVGA 62
Query: 367 TVEVKQDPKKDAMEAVITKIQDCSQYTVVFDDGDITTLRRSALCLKSGRHFNESETLDQL 546
VEVK + EAVI K+ D S YTVVFDDGD TLRRS+LCLK RHF ESETLDQL
Sbjct: 63 IVEVK-NLDGAYQEAVINKLTDASWYTVVFDDGDEKTLRRSSLCLKGERHFAESETLDQL 121
Query: 547 PLTHPEHFSTPVIAXXXXXXXXAQ--SDDSEGEGTSRPVKADSAEREPHVGRVVLV 708
PLT+PEHF TPVI + ++ +S + D + + +G+VV V
Sbjct: 122 PLTNPEHFGTPVIGKKTNRGRRSNHIPEEESSSSSSDEDEDDRKQIDELLGKVVCV 177
>AF214114-1|AAF28341.2| 1226|Homo sapiens retinoblastoma-binding
protein 1-like 1 protein.
Length = 1226
Score = 178 bits (434), Expect = 1e-44
Identities = 94/176 (53%), Positives = 115/176 (65%), Gaps = 2/176 (1%)
Frame = +1
Query: 187 DDPPYLPVGTDVSAKYKGAFCEAKIKKVVRNIKCKVTLKAGGGTITVNDDVIKGTLRIGS 366
D+PPYL VGTDVSAKY+GAFCEAKIK R +K KVT + T+ V DD IKG L++G+
Sbjct: 5 DEPPYLTVGTDVSAKYRGAFCEAKIKTAKRLVKVKVTFRHDSSTVEVQDDHIKGPLKVGA 64
Query: 367 TVEVKQDPKKDAMEAVITKIQDCSQYTVVFDDGDITTLRRSALCLKSGRHFNESETLDQL 546
VEVK + EAVI K+ D S YTVVFDDGD TLRRS+LCLK RHF ESETLDQL
Sbjct: 65 IVEVK-NLDGAYQEAVINKLTDASWYTVVFDDGDEKTLRRSSLCLKGERHFAESETLDQL 123
Query: 547 PLTHPEHFSTPVIAXXXXXXXXAQ--SDDSEGEGTSRPVKADSAEREPHVGRVVLV 708
PLT+PEHF TPVI + ++ +S + D + + +G+VV V
Sbjct: 124 PLTNPEHFGTPVIGKKTNRGRRSNHIPEEESSSSSSDEDEDDRKQIDELLGKVVCV 179
>AF208045-1|AAF23433.3| 1213|Homo sapiens breast cancer-associated
antigen BRCAA1 protein.
Length = 1213
Score = 178 bits (434), Expect = 1e-44
Identities = 94/176 (53%), Positives = 115/176 (65%), Gaps = 2/176 (1%)
Frame = +1
Query: 187 DDPPYLPVGTDVSAKYKGAFCEAKIKKVVRNIKCKVTLKAGGGTITVNDDVIKGTLRIGS 366
D+PPYL VGTDVSAKY+GAFCEAKIK R +K KVT + T+ V DD IKG L++G+
Sbjct: 5 DEPPYLTVGTDVSAKYRGAFCEAKIKTAKRLVKVKVTFRHDSSTVEVQDDHIKGPLKVGA 64
Query: 367 TVEVKQDPKKDAMEAVITKIQDCSQYTVVFDDGDITTLRRSALCLKSGRHFNESETLDQL 546
VEVK + EAVI K+ D S YTVVFDDGD TLRRS+LCLK RHF ESETLDQL
Sbjct: 65 IVEVK-NLDGAYQEAVINKLTDASWYTVVFDDGDEKTLRRSSLCLKGERHFAESETLDQL 123
Query: 547 PLTHPEHFSTPVIAXXXXXXXXAQ--SDDSEGEGTSRPVKADSAEREPHVGRVVLV 708
PLT+PEHF TPVI + ++ +S + D + + +G+VV V
Sbjct: 124 PLTNPEHFGTPVIGKKTNRGRRSNHIPEEESSSSSSDEDEDDRKQIDELLGKVVCV 179
>AB210032-1|BAE06114.1| 1325|Homo sapiens ARID4B variant protein
protein.
Length = 1325
Score = 178 bits (434), Expect = 1e-44
Identities = 94/176 (53%), Positives = 115/176 (65%), Gaps = 2/176 (1%)
Frame = +1
Query: 187 DDPPYLPVGTDVSAKYKGAFCEAKIKKVVRNIKCKVTLKAGGGTITVNDDVIKGTLRIGS 366
D+PPYL VGTDVSAKY+GAFCEAKIK R +K KVT + T+ V DD IKG L++G+
Sbjct: 18 DEPPYLTVGTDVSAKYRGAFCEAKIKTAKRLVKVKVTFRHDSSTVEVQDDHIKGPLKVGA 77
Query: 367 TVEVKQDPKKDAMEAVITKIQDCSQYTVVFDDGDITTLRRSALCLKSGRHFNESETLDQL 546
VEVK + EAVI K+ D S YTVVFDDGD TLRRS+LCLK RHF ESETLDQL
Sbjct: 78 IVEVK-NLDGAYQEAVINKLTDASWYTVVFDDGDEKTLRRSSLCLKGERHFAESETLDQL 136
Query: 547 PLTHPEHFSTPVIAXXXXXXXXAQ--SDDSEGEGTSRPVKADSAEREPHVGRVVLV 708
PLT+PEHF TPVI + ++ +S + D + + +G+VV V
Sbjct: 137 PLTNPEHFGTPVIGKKTNRGRRSNHIPEEESSSSSSDEDEDDRKQIDELLGKVVCV 192
>S66427-1|AAB28543.1| 1257|Homo sapiens retinoblastoma binding
protein 1 protein.
Length = 1257
Score = 174 bits (423), Expect = 3e-43
Identities = 93/165 (56%), Positives = 108/165 (65%)
Frame = +1
Query: 187 DDPPYLPVGTDVSAKYKGAFCEAKIKKVVRNIKCKVTLKAGGGTITVNDDVIKGTLRIGS 366
D+P YL VGTDVSAKY+GAFCEAKIK V R +K KV LK T V DD +KG LR+G+
Sbjct: 5 DEPAYLTVGTDVSAKYRGAFCEAKIKTVKRLVKVKVLLKQDNTTQLVQDDQVKGPLRVGA 64
Query: 367 TVEVKQDPKKDAMEAVITKIQDCSQYTVVFDDGDITTLRRSALCLKSGRHFNESETLDQL 546
VE + EA+I+K+ D S YTVVFDDGD TLRR++LCLK RHF ESETLDQL
Sbjct: 65 IVETRTSDGS-FQEAIISKLTDASWYTVVFDDGDERTLRRTSLCLKGERHFAESETLDQL 123
Query: 547 PLTHPEHFSTPVIAXXXXXXXXAQSDDSEGEGTSRPVKADSAERE 681
PLT+PEHF TPVIA + G +S PV D E E
Sbjct: 124 PLTNPEHFGTPVIA----------KKTNRGRRSSLPVTEDEKEEE 158
>BC026230-1|AAH26230.1| 424|Homo sapiens ARID4A protein protein.
Length = 424
Score = 174 bits (423), Expect = 3e-43
Identities = 93/165 (56%), Positives = 108/165 (65%)
Frame = +1
Query: 187 DDPPYLPVGTDVSAKYKGAFCEAKIKKVVRNIKCKVTLKAGGGTITVNDDVIKGTLRIGS 366
D+P YL VGTDVSAKY+GAFCEAKIK V R +K KV LK T V DD +KG LR+G+
Sbjct: 5 DEPAYLTVGTDVSAKYRGAFCEAKIKTVKRLVKVKVLLKQDNTTQLVQDDQVKGPLRVGA 64
Query: 367 TVEVKQDPKKDAMEAVITKIQDCSQYTVVFDDGDITTLRRSALCLKSGRHFNESETLDQL 546
VE + EA+I+K+ D S YTVVFDDGD TLRR++LCLK RHF ESETLDQL
Sbjct: 65 IVETRTSDGS-FQEAIISKLTDASWYTVVFDDGDERTLRRTSLCLKGERHFAESETLDQL 123
Query: 547 PLTHPEHFSTPVIAXXXXXXXXAQSDDSEGEGTSRPVKADSAERE 681
PLT+PEHF TPVIA + G +S PV D E E
Sbjct: 124 PLTNPEHFGTPVIA----------KKTNRGRRSSLPVTEDEKEEE 158
>AY220790-1|AAO63590.1| 1312|Homo sapiens SIN3A-associated protein
180 protein.
Length = 1312
Score = 174 bits (423), Expect = 3e-43
Identities = 92/176 (52%), Positives = 113/176 (64%), Gaps = 2/176 (1%)
Frame = +1
Query: 187 DDPPYLPVGTDVSAKYKGAFCEAKIKKVVRNIKCKVTLKAGGGTITVNDDVIKGTLRIGS 366
D+PPYL VGT VSAKY+GAFCEAKIK R +K KVT + T+ V DD IKG L++G+
Sbjct: 5 DEPPYLTVGTGVSAKYRGAFCEAKIKTAKRLVKVKVTFRHDSSTVEVQDDHIKGPLKVGA 64
Query: 367 TVEVKQDPKKDAMEAVITKIQDCSQYTVVFDDGDITTLRRSALCLKSGRHFNESETLDQL 546
VEVK + EA I K+ D S YTVVFDDGD TLRRS+LCLK RHF ESETLDQL
Sbjct: 65 IVEVK-NLDGAYQEAAINKLTDASWYTVVFDDGDEKTLRRSSLCLKGERHFAESETLDQL 123
Query: 547 PLTHPEHFSTPVIAXXXXXXXXAQ--SDDSEGEGTSRPVKADSAEREPHVGRVVLV 708
PLT+PEHF TPVI + ++ +S + D + + +G+VV V
Sbjct: 124 PLTNPEHFGTPVIGKKTNRGRRSNHIPEEESSSSSSDEDEDDRKQIDELLGKVVCV 179
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 105,105,005
Number of Sequences: 237096
Number of extensions: 2271059
Number of successful extensions: 4340
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 4137
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4322
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8231208258
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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