Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc12g12
         (709 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC024744-4|AAK72071.3| 1192|Caenorhabditis elegans Hypothetical ...   120   8e-28
Z32680-2|CAA83597.1| 1218|Caenorhabditis elegans Hypothetical pr...    30   1.9  
Z32680-1|CAA83599.1| 1223|Caenorhabditis elegans Hypothetical pr...    30   1.9  
Z70205-10|CAA94122.2|  887|Caenorhabditis elegans Hypothetical p...    29   2.5  
Z68003-5|CAA91979.2|  887|Caenorhabditis elegans Hypothetical pr...    29   2.5  
Z79597-1|CAB01861.1|  271|Caenorhabditis elegans Hypothetical pr...    28   5.7  
U13642-4|AAG00043.2|  687|Caenorhabditis elegans Hypothetical pr...    28   5.7  
Z81541-6|CAB04413.2|  326|Caenorhabditis elegans Hypothetical pr...    28   7.5  
U23452-1|AAK31545.2|  284|Caenorhabditis elegans Hypothetical pr...    27   9.9  
AC084197-5|AAO38574.1|  335|Caenorhabditis elegans Serpentine re...    27   9.9  

>AC024744-4|AAK72071.3| 1192|Caenorhabditis elegans Hypothetical
           protein Y108G3AL.7 protein.
          Length = 1192

 Score =  120 bits (290), Expect = 8e-28
 Identities = 65/135 (48%), Positives = 86/135 (63%), Gaps = 2/135 (1%)
 Frame = +1

Query: 187 DDPPYLPVGTDVSAKYKGAFCEAKIKKVVRNIKCKVTLKAG--GGTITVNDDVIKGTLRI 360
           DDP +L +GT+VSAK+KGA+CEAKI+KV R++K KV+LK    G  I  ++D+      I
Sbjct: 32  DDPAFLALGTEVSAKFKGAYCEAKIQKVDRSLKVKVSLKESPFGQMIVQDNDLPNAKFEI 91

Query: 361 GSTVEVKQDPKKDAMEAVITKIQDCSQYTVVFDDGDITTLRRSALCLKSGRHFNESETLD 540
               +V    K   +   I  I+D S+Y VVF+DGD   LRR+ L LK G+HF     LD
Sbjct: 92  NELTDVVFQRK--FIRCQIQSIKDQSKYHVVFNDGDEKELRRTQLVLKGGKHFAADGNLD 149

Query: 541 QLPLTHPEHFSTPVI 585
            +PLT+PE FSTPVI
Sbjct: 150 SMPLTNPESFSTPVI 164


>Z32680-2|CAA83597.1| 1218|Caenorhabditis elegans Hypothetical
           protein C28A5.2 protein.
          Length = 1218

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
 Frame = -2

Query: 474 RDVTIIKHNSILTAILYFSNDSFHCIFFRILFHFYS-TSNPQCTFYYIIIHSNCSSTS 304
           RDVT++    ++ AI++FSN+      F+I    YS   N    F  I++ +    TS
Sbjct: 76  RDVTVVNSKVVIFAIVHFSNECLERDPFKINGMDYSIIENENTDFQKIVLPTRVLQTS 133


>Z32680-1|CAA83599.1| 1223|Caenorhabditis elegans Hypothetical
           protein C28A5.1 protein.
          Length = 1223

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
 Frame = -2

Query: 474 RDVTIIKHNSILTAILYFSNDSFHCIFFRILFHFYS-TSNPQCTFYYIIIHSNCSSTS 304
           RDVT++    ++ AI++FSN+      F+I    YS   N    F  I++ +    TS
Sbjct: 76  RDVTVVNSKVVIFAIVHFSNECLERDPFKINGMDYSIIENENTDFQKIVLPTRVLQTS 133


>Z70205-10|CAA94122.2|  887|Caenorhabditis elegans Hypothetical
           protein E02H4.3a protein.
          Length = 887

 Score = 29.5 bits (63), Expect = 2.5
 Identities = 16/60 (26%), Positives = 27/60 (45%)
 Frame = +1

Query: 250 EAKIKKVVRNIKCKVTLKAGGGTITVNDDVIKGTLRIGSTVEVKQDPKKDAMEAVITKIQ 429
           E + KK V  +    + +AG G  T  DD    T    +       PK  A++ +I+++Q
Sbjct: 425 EQRAKKTVNAVAAAFSTQAGSGNATTVDDPASTTTSKENPAAQPPKPKSAAVQNLISQLQ 484


>Z68003-5|CAA91979.2|  887|Caenorhabditis elegans Hypothetical
           protein E02H4.3a protein.
          Length = 887

 Score = 29.5 bits (63), Expect = 2.5
 Identities = 16/60 (26%), Positives = 27/60 (45%)
 Frame = +1

Query: 250 EAKIKKVVRNIKCKVTLKAGGGTITVNDDVIKGTLRIGSTVEVKQDPKKDAMEAVITKIQ 429
           E + KK V  +    + +AG G  T  DD    T    +       PK  A++ +I+++Q
Sbjct: 425 EQRAKKTVNAVAAAFSTQAGSGNATTVDDPASTTTSKENPAAQPPKPKSAAVQNLISQLQ 484


>Z79597-1|CAB01861.1|  271|Caenorhabditis elegans Hypothetical
           protein C33A11.2 protein.
          Length = 271

 Score = 28.3 bits (60), Expect = 5.7
 Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
 Frame = -2

Query: 438 TAILYFSNDSFHCIFFRILFHFYS-TSNPQCTFYYIIIHSNCSSTSFKCNFAFNI 277
           +A+  F   S + IF   L H  + T   +  FYY +I +  S   F C+F F I
Sbjct: 128 SAVASFGGFSIYMIFQCYLTHRVTPTITLRTVFYYRVIFTIFSVICFCCSFGFGI 182


>U13642-4|AAG00043.2|  687|Caenorhabditis elegans Hypothetical
           protein ZC395.8 protein.
          Length = 687

 Score = 28.3 bits (60), Expect = 5.7
 Identities = 12/26 (46%), Positives = 17/26 (65%)
 Frame = -3

Query: 374 STVLPILNVPFITSSFTVIVPPPALS 297
           ++ LP + +P I S +  IVPPPA S
Sbjct: 531 NSTLPSIPIPSIFSPYEPIVPPPATS 556


>Z81541-6|CAB04413.2|  326|Caenorhabditis elegans Hypothetical
           protein F48F5.4 protein.
          Length = 326

 Score = 27.9 bits (59), Expect = 7.5
 Identities = 17/49 (34%), Positives = 29/49 (59%), Gaps = 4/49 (8%)
 Frame = -2

Query: 144 DSCESKFKIY---YHVICSLLLFTMCI-IFPF*SKFVRHVNVNIMKSHS 10
           D+    F IY   + VICS+L FTM I I+ F +K ++ + + +  S++
Sbjct: 2   DTLYHVFHIYWPVFFVICSILYFTMYILIYNFTTKILKPMRIFLYSSNA 50


>U23452-1|AAK31545.2|  284|Caenorhabditis elegans Hypothetical
           protein R07G3.5 protein.
          Length = 284

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 17/57 (29%), Positives = 26/57 (45%)
 Frame = -2

Query: 393 FRILFHFYSTSNPQCTFYYIIIHSNCSSTSFKCNFAFNIPYNFFYFSLTECTLVFCT 223
           +R +FH  S S  + +F  I+ H+N     F C      P  +   SL  C+L + T
Sbjct: 203 YRKIFHRASPSQKEDSFELIVCHANV-IRYFICRALQFPPEGWLRMSLGNCSLTWIT 258


>AC084197-5|AAO38574.1|  335|Caenorhabditis elegans Serpentine
           receptor, class v protein26 protein.
          Length = 335

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = -3

Query: 533 VSLSLKCLPLFRQSADRLNVVMSPSSNTTV 444
           VSL ++C+ +   S  R  V+ SP SN T+
Sbjct: 99  VSLYIRCIGILLLSLQRYFVITSPHSNLTI 128


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,033,341
Number of Sequences: 27780
Number of extensions: 369833
Number of successful extensions: 1049
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 984
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1048
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1645110168
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)