Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc12g09
         (398 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ435338-1|ABD92653.1|  135|Apis mellifera OBP21 protein.              23   1.7  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              22   2.2  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    22   2.2  
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    21   6.9  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    21   6.9  
DQ435335-1|ABD92650.1|  135|Apis mellifera OBP18 protein.              20   9.1  
DQ435332-1|ABD92647.1|  135|Apis mellifera OBP15 protein.              20   9.1  
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                20   9.1  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    20   9.1  

>DQ435338-1|ABD92653.1|  135|Apis mellifera OBP21 protein.
          Length = 135

 Score = 22.6 bits (46), Expect = 1.7
 Identities = 8/27 (29%), Positives = 17/27 (62%)
 Frame = +3

Query: 6   GGNFNEADRQKLDLVHTLVNDIKNILT 86
           GGNFNE   +++  ++   N++  ++T
Sbjct: 76  GGNFNEVVVREIAEIYLDENEVNKLIT 102


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 22.2 bits (45), Expect = 2.2
 Identities = 10/17 (58%), Positives = 12/17 (70%)
 Frame = +2

Query: 215 KKAIAAEQTLRTTADVS 265
           KKAI A +TLR T  V+
Sbjct: 499 KKAIVAGETLRVTCPVA 515



 Score = 21.8 bits (44), Expect = 3.0
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = +1

Query: 238  NAAHHSRCFFFAEPRGECRFSRV 306
            NA+ HSR    + PR   R+SRV
Sbjct: 1768 NASAHSRSGSQSMPRQNGRYSRV 1790


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 22.2 bits (45), Expect = 2.2
 Identities = 12/35 (34%), Positives = 18/35 (51%)
 Frame = +3

Query: 129  QKKAAAMP*RYESAA*QNPQKSLKSCSSTRKLSLP 233
            +K  AAM  +       NP  S K  S+T +L++P
Sbjct: 1731 EKNEAAMKLKKRIEKGANPDLSQKPVSTTEELTVP 1765


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 20.6 bits (41), Expect = 6.9
 Identities = 6/14 (42%), Positives = 9/14 (64%)
 Frame = +1

Query: 40  WTSCTLWLTISKIY 81
           +T+C +WL    IY
Sbjct: 713 YTTCIIWLAFVPIY 726



 Score = 20.2 bits (40), Expect = 9.1
 Identities = 6/18 (33%), Positives = 13/18 (72%)
 Frame = -2

Query: 61  TKVCTRSSFCLSASLKLP 8
           T+  T  + C++A++K+P
Sbjct: 159 TREATERNVCIAAAVKVP 176


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 20.6 bits (41), Expect = 6.9
 Identities = 6/14 (42%), Positives = 9/14 (64%)
 Frame = +1

Query: 40  WTSCTLWLTISKIY 81
           +T+C +WL    IY
Sbjct: 803 YTTCIIWLAFVPIY 816



 Score = 20.2 bits (40), Expect = 9.1
 Identities = 6/18 (33%), Positives = 13/18 (72%)
 Frame = -2

Query: 61  TKVCTRSSFCLSASLKLP 8
           T+  T  + C++A++K+P
Sbjct: 249 TREATERNVCIAAAVKVP 266


>DQ435335-1|ABD92650.1|  135|Apis mellifera OBP18 protein.
          Length = 135

 Score = 20.2 bits (40), Expect = 9.1
 Identities = 8/27 (29%), Positives = 15/27 (55%)
 Frame = +3

Query: 6   GGNFNEADRQKLDLVHTLVNDIKNILT 86
           GGNFNE   +++  +    N +  ++T
Sbjct: 76  GGNFNEVVIREIAEIFLDENGVNKLIT 102


>DQ435332-1|ABD92647.1|  135|Apis mellifera OBP15 protein.
          Length = 135

 Score = 20.2 bits (40), Expect = 9.1
 Identities = 8/26 (30%), Positives = 15/26 (57%)
 Frame = +3

Query: 9   GNFNEADRQKLDLVHTLVNDIKNILT 86
           GNFNE   +++  +    N+I  ++T
Sbjct: 77  GNFNEHVSREIAKIFLNENEINQLIT 102


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 20.2 bits (40), Expect = 9.1
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = -1

Query: 332 LQPHSLIFPTLEKRHSPRGSA 270
           L P+S + P+L   HS   SA
Sbjct: 273 LNPNSSLQPSLASHHSHLSSA 293


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 20.2 bits (40), Expect = 9.1
 Identities = 5/14 (35%), Positives = 9/14 (64%)
 Frame = +1

Query: 40  WTSCTLWLTISKIY 81
           +T+C +WL    +Y
Sbjct: 855 YTTCVIWLAFVPLY 868


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 119,137
Number of Sequences: 438
Number of extensions: 2423
Number of successful extensions: 12
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used:  9885360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)