Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc12f18
(652 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P38919 Cluster: Eukaryotic initiation factor 4A-III; n=... 291 1e-77
UniRef50_A2AAP7 Cluster: DEAD (Asp-Glu-Ala-Asp) box polypeptide ... 238 9e-62
UniRef50_Q14240 Cluster: Eukaryotic initiation factor 4A-II; n=3... 215 1e-54
UniRef50_A0D232 Cluster: Chromosome undetermined scaffold_35, wh... 169 4e-41
UniRef50_A5BYF4 Cluster: Putative uncharacterized protein; n=1; ... 164 2e-39
UniRef50_A0BEU9 Cluster: Chromosome undetermined scaffold_102, w... 152 6e-36
UniRef50_A2EPG4 Cluster: DEAD/DEAH box helicase family protein; ... 143 4e-33
UniRef50_Q4T4A9 Cluster: Chromosome undetermined SCAF9757, whole... 137 2e-31
UniRef50_P39517 Cluster: ATP-dependent RNA helicase DHH1; n=103;... 133 4e-30
UniRef50_Q8SQM5 Cluster: ATP-dependent RNA helicase eIF4A; n=1; ... 130 2e-29
UniRef50_Q4SP80 Cluster: Chromosome 15 SCAF14542, whole genome s... 130 4e-29
UniRef50_Q5KJI2 Cluster: ATP-dependent RNA helicase DHH1; n=4; D... 129 7e-29
UniRef50_UPI000065E01D Cluster: Homolog of Brachydanio rerio "Eu... 123 7e-29
UniRef50_A4FZ46 Cluster: DEAD/DEAH box helicase domain protein; ... 127 3e-28
UniRef50_Q67NW1 Cluster: ATP-dependent RNA helicase; n=5; Firmic... 124 1e-27
UniRef50_Q1MY97 Cluster: DEAD/DEAH box helicase-like protein; n=... 124 2e-27
UniRef50_A7HDE9 Cluster: DEAD/DEAH box helicase domain protein; ... 124 2e-27
UniRef50_Q81VG0 Cluster: DEAD-box ATP-dependent RNA helicase ydb... 123 3e-27
UniRef50_Q4T821 Cluster: Chromosome undetermined SCAF7914, whole... 123 4e-27
UniRef50_Q8XKJ8 Cluster: ATP-dependent RNA helicase; n=12; Clost... 122 7e-27
UniRef50_Q484Q1 Cluster: RNA helicase DeaD; n=1; Colwellia psych... 121 1e-26
UniRef50_Q725W5 Cluster: ATP-dependent RNA helicase, DEAD/DEAH f... 118 1e-25
UniRef50_P0A9P8 Cluster: Cold-shock DEAD box protein A; n=54; Ga... 117 2e-25
UniRef50_UPI00015B4D43 Cluster: PREDICTED: hypothetical protein;... 117 3e-25
UniRef50_Q1QYG3 Cluster: DEAD/DEAH box helicase-like protein; n=... 116 4e-25
UniRef50_A2TP65 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 116 4e-25
UniRef50_UPI0000566899 Cluster: UPI0000566899 related cluster; n... 115 9e-25
UniRef50_Q11QF9 Cluster: Inducible ATP-independent RNA helicase;... 115 1e-24
UniRef50_Q5L3G9 Cluster: DEAD-box ATP-dependent RNA helicase ydb... 114 2e-24
UniRef50_Q9UHI6 Cluster: Probable ATP-dependent RNA helicase DDX... 114 2e-24
UniRef50_Q9KAA6 Cluster: ATP-dependent RNA helicase; n=5; Firmic... 113 3e-24
UniRef50_Q8YXJ0 Cluster: ATP-dependent RNA helicase; n=11; Cyano... 113 3e-24
UniRef50_Q11UP8 Cluster: ATP-dependent RNA helicase; n=1; Cytoph... 113 3e-24
UniRef50_Q3AFI3 Cluster: ATP-dependent RNA helicase, DEAD box fa... 113 5e-24
UniRef50_A4BET4 Cluster: DEAD/DEAH box helicase-like protein; n=... 113 5e-24
UniRef50_Q49K88 Cluster: DEAD box RNA helicase; n=1; Toxoplasma ... 112 6e-24
UniRef50_Q7VFA9 Cluster: ATP-dependent RNA helicase DeaD; n=6; H... 112 8e-24
UniRef50_A6H0L1 Cluster: Probable ATP-dependent RNA helicase, DE... 112 8e-24
UniRef50_A6DL95 Cluster: Probable ATP-dependent RNA helicase; n=... 112 8e-24
UniRef50_P25888 Cluster: Putative ATP-dependent RNA helicase rhl... 112 8e-24
UniRef50_P20449 Cluster: ATP-dependent RNA helicase DBP5; n=23; ... 112 8e-24
UniRef50_Q8R4Z5 Cluster: DEAD-box corepressor DP103 beta; n=5; T... 111 1e-23
UniRef50_A7JLA3 Cluster: ATP-dependent RNA helicase; n=20; Franc... 111 1e-23
UniRef50_A0Z0M4 Cluster: ATP-dependent RNA helicase; n=1; marine... 111 1e-23
UniRef50_Q54TF8 Cluster: DEAD-box RNA helicase; n=2; Dictyosteli... 111 1e-23
UniRef50_Q6MN50 Cluster: ATP-dependent RNA helicase; n=1; Bdello... 111 1e-23
UniRef50_A7BCL2 Cluster: Putative uncharacterized protein; n=1; ... 111 1e-23
UniRef50_A1U3D6 Cluster: DEAD/DEAH box helicase domain protein; ... 111 2e-23
UniRef50_Q0W8H7 Cluster: ATP-dependent RNA helicase; n=1; uncult... 111 2e-23
UniRef50_Q3AX69 Cluster: DEAD/DEAH box helicase-like; n=15; Cyan... 110 2e-23
UniRef50_Q0RTL3 Cluster: Cold-shock DeaD box ATP-dependent RNA h... 110 2e-23
UniRef50_A2DVG1 Cluster: DEAD/DEAH box helicase family protein; ... 110 2e-23
UniRef50_A2SQE1 Cluster: DEAD/DEAH box helicase domain protein; ... 110 2e-23
UniRef50_Q7UNV7 Cluster: ATP-dependent RNA helicase; n=2; Planct... 110 3e-23
UniRef50_Q5GZA1 Cluster: ATP-dependent RNA helicase; n=6; Xantho... 110 3e-23
UniRef50_Q26CN9 Cluster: ATP-dependent RNA helicase; n=1; Flavob... 110 3e-23
UniRef50_A4M6V6 Cluster: DEAD/DEAH box helicase domain protein; ... 110 3e-23
UniRef50_Q893G8 Cluster: ATP-dependent RNA helicase; n=4; Clostr... 109 4e-23
UniRef50_Q8SSD2 Cluster: ATP-DEPENDENT RNA HELICASE INVOLVED IN ... 109 6e-23
UniRef50_Q5NZY2 Cluster: ATP-dependent RNA helicase DeaD; n=18; ... 109 7e-23
UniRef50_A4J5M3 Cluster: DEAD/DEAH box helicase domain protein; ... 109 7e-23
UniRef50_P96614 Cluster: DEAD-box ATP-dependent RNA helicase ydb... 109 7e-23
UniRef50_P0C218 Cluster: Probable ATP-dependent RNA helicase DDX... 109 7e-23
UniRef50_Q5KBP5 Cluster: ATP-dependent RNA helicase DBP5; n=3; F... 109 7e-23
UniRef50_Q98RE0 Cluster: ATP-DEPENDENT RNA HELICASE; n=1; Mycopl... 108 1e-22
UniRef50_Q0TQ86 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 108 1e-22
UniRef50_P44586 Cluster: Cold-shock DEAD box protein A homolog; ... 108 1e-22
UniRef50_Q9PGP6 Cluster: ATP-dependent RNA helicase; n=10; cellu... 108 1e-22
UniRef50_Q5ZT20 Cluster: ATP-dependent RNA helicase; n=4; Legion... 108 1e-22
UniRef50_Q185X0 Cluster: ATP-dependent RNA helicase; n=3; Clostr... 108 1e-22
UniRef50_A6TUK6 Cluster: DEAD/DEAH box helicase domain protein; ... 108 1e-22
UniRef50_A5CVQ6 Cluster: ATP-dependent RNA helicase DeaD; n=2; s... 108 1e-22
UniRef50_Q4IZ16 Cluster: DEAD/DEAH box helicase:Helicase, C-term... 107 2e-22
UniRef50_Q11U28 Cluster: ATP-dependent RNA helicase protein; n=4... 107 2e-22
UniRef50_Q0AVQ9 Cluster: ATP-dependent RNA helicase; n=1; Syntro... 107 2e-22
UniRef50_A0V009 Cluster: DEAD/DEAH box helicase-like; n=1; Clost... 107 2e-22
UniRef50_A6TTG0 Cluster: DEAD/DEAH box helicase domain protein; ... 107 2e-22
UniRef50_A6T3R2 Cluster: ATP-dependent RNA helicase; n=52; cellu... 107 2e-22
UniRef50_A5E6W6 Cluster: ATP-dependent rRNA helicase RRP3; n=4; ... 107 2e-22
UniRef50_Q0HYG8 Cluster: DEAD/DEAH box helicase domain protein; ... 106 4e-22
UniRef50_A5BNE7 Cluster: Putative uncharacterized protein; n=1; ... 106 4e-22
UniRef50_P38712 Cluster: ATP-dependent rRNA helicase RRP3; n=6; ... 106 4e-22
UniRef50_Q5QY63 Cluster: ATP-dependent RNA helicase; n=3; Altero... 106 5e-22
UniRef50_A3I1F5 Cluster: DEAD/DEAH box helicase-like protein; n=... 105 7e-22
UniRef50_Q7A4G0 Cluster: Probable DEAD-box ATP-dependent RNA hel... 105 7e-22
UniRef50_Q08Q14 Cluster: HeliCase, c-terminal:dead/deah box heli... 105 9e-22
UniRef50_A6DK15 Cluster: ATP-dependent RNA helicase, specific fo... 105 9e-22
UniRef50_O26305 Cluster: ATP-dependent RNA helicase, eIF-4A fami... 105 9e-22
UniRef50_Q4N9Q9 Cluster: DEAD box RNA helicase, putative; n=3; P... 105 1e-21
UniRef50_Q23U16 Cluster: DEAD/DEAH box helicase family protein; ... 105 1e-21
UniRef50_Q0E2Q3 Cluster: Putative eukaryotic initiation factor 4... 105 1e-21
UniRef50_UPI0000D55AB0 Cluster: PREDICTED: similar to Probable A... 104 2e-21
UniRef50_A0BPV0 Cluster: Chromosome undetermined scaffold_12, wh... 104 2e-21
UniRef50_UPI0001509D93 Cluster: DEAD/DEAH box helicase family pr... 104 2e-21
UniRef50_Q4SJI2 Cluster: Chromosome 4 SCAF14575, whole genome sh... 104 2e-21
UniRef50_Q6D2K3 Cluster: ATP-independent RNA helicase; n=6; Prot... 104 2e-21
UniRef50_Q6AMK6 Cluster: Probable ATP-dependent RNA helicase; n=... 104 2e-21
UniRef50_Q5FUQ9 Cluster: ATP-dependent RNA helicase; n=11; cellu... 104 2e-21
UniRef50_Q3AZR1 Cluster: DEAD/DEAH box helicase-like; n=2; Synec... 104 2e-21
UniRef50_Q39MK8 Cluster: DEAD/DEAH box helicase; n=10; Proteobac... 104 2e-21
UniRef50_O34750 Cluster: YfmL protein; n=5; Bacillus|Rep: YfmL p... 104 2e-21
UniRef50_A7HKQ8 Cluster: DEAD/DEAH box helicase domain protein; ... 104 2e-21
UniRef50_A7CUH7 Cluster: DEAD/DEAH box helicase domain protein; ... 104 2e-21
UniRef50_A6VTY7 Cluster: DEAD/DEAH box helicase domain protein; ... 104 2e-21
UniRef50_A5G1U8 Cluster: DEAD/DEAH box helicase domain protein; ... 104 2e-21
UniRef50_A0KTC9 Cluster: DEAD/DEAH box helicase domain protein; ... 104 2e-21
UniRef50_Q15T34 Cluster: DEAD/DEAH box helicase-like; n=1; Pseud... 103 3e-21
UniRef50_A6NQG8 Cluster: Putative uncharacterized protein; n=2; ... 103 3e-21
UniRef50_A5FST0 Cluster: DEAD/DEAH box helicase domain protein; ... 103 3e-21
UniRef50_A3WD13 Cluster: DNA and RNA helicase; n=2; Alphaproteob... 103 3e-21
UniRef50_Q01PH0 Cluster: DEAD/DEAH box helicase domain protein; ... 103 4e-21
UniRef50_A7CSF3 Cluster: DEAD/DEAH box helicase domain protein; ... 103 4e-21
UniRef50_A3ZWP8 Cluster: ATP-dependent RNA helicase; n=1; Blasto... 103 4e-21
UniRef50_Q55BR9 Cluster: Putative uncharacterized protein; n=1; ... 103 4e-21
UniRef50_Q11039 Cluster: Cold-shock DEAD box protein A homolog; ... 103 4e-21
UniRef50_Q89UH0 Cluster: Dead-box ATP-dependent RNA helicase; n=... 103 5e-21
UniRef50_A4B5L7 Cluster: ATP-dependent RNA helicase DbpA; n=3; P... 103 5e-21
UniRef50_A4RIF1 Cluster: ATP-dependent RNA helicase DBP5; n=7; A... 103 5e-21
UniRef50_Q5NML9 Cluster: DNA and RNA helicase; n=28; Alphaproteo... 102 6e-21
UniRef50_Q0G0P8 Cluster: Superfamily II DNA and RNA helicase; n=... 102 6e-21
UniRef50_Q2NEZ7 Cluster: Predicted helicase; n=6; cellular organ... 102 6e-21
UniRef50_Q09719 Cluster: ATP-dependent RNA helicase dbp10; n=2; ... 102 6e-21
UniRef50_Q4Q2Z6 Cluster: ATP-dependent RNA helicase, putative; n... 102 9e-21
UniRef50_Q2PZC2 Cluster: Vasa protein; n=3; Apidae|Rep: Vasa pro... 102 9e-21
UniRef50_UPI0000585111 Cluster: PREDICTED: hypothetical protein;... 101 1e-20
UniRef50_Q9KLE2 Cluster: ATP-dependent RNA helicase DeaD; n=35; ... 101 1e-20
UniRef50_Q8SY39 Cluster: LD28101p; n=3; Diptera|Rep: LD28101p - ... 101 1e-20
UniRef50_UPI0000499A01 Cluster: DEAD/DEAH box helicase; n=1; Ent... 101 1e-20
UniRef50_Q9S531 Cluster: DEAD-box protein; n=4; Cystobacterineae... 101 1e-20
UniRef50_Q4N4B1 Cluster: ATP-dependent RNA helicase, putative; n... 101 1e-20
UniRef50_Q9LYJ9 Cluster: DEAD-box ATP-dependent RNA helicase 46;... 101 1e-20
UniRef50_Q8EZ11 Cluster: ATP-dependent RNA helicase; n=4; Leptos... 101 2e-20
UniRef50_Q8A2K2 Cluster: ATP-dependent RNA helicase; n=10; cellu... 101 2e-20
UniRef50_Q31AC4 Cluster: DEAD/DEAH box helicase-like protein; n=... 101 2e-20
UniRef50_A5UZK3 Cluster: DEAD/DEAH box helicase domain protein; ... 101 2e-20
UniRef50_A2U1Q9 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 101 2e-20
UniRef50_Q3LWE1 Cluster: Translation initiation factor 4A2; n=1;... 101 2e-20
UniRef50_Q1IMK6 Cluster: DEAD/DEAH box helicase-like; n=1; Acido... 100 3e-20
UniRef50_Q17BP5 Cluster: DEAD box ATP-dependent RNA helicase; n=... 100 3e-20
UniRef50_Q13838 Cluster: Spliceosome RNA helicase BAT1; n=55; Eu... 100 3e-20
UniRef50_Q9LUW5 Cluster: DEAD-box ATP-dependent RNA helicase 53;... 100 3e-20
UniRef50_Q8SQK9 Cluster: ATP-dependent RNA helicase DHH1; n=1; E... 100 3e-20
UniRef50_UPI00015B5D7B Cluster: PREDICTED: similar to LD28101p; ... 99 5e-20
UniRef50_Q6MN67 Cluster: ATP-dependent RNA helicase; n=3; Deltap... 99 5e-20
UniRef50_A0VLH7 Cluster: DEAD/DEAH box helicase domain protein; ... 99 5e-20
UniRef50_Q2LZJ8 Cluster: GA19670-PA; n=1; Drosophila pseudoobscu... 99 5e-20
UniRef50_Q2FKY7 Cluster: DEAD/DEAH box helicase-like; n=1; Metha... 99 5e-20
UniRef50_A0RUV7 Cluster: Superfamily II helicase; n=3; Thermopro... 99 5e-20
UniRef50_Q835K0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 100 6e-20
UniRef50_A6QC93 Cluster: ATP-independent RNA helicase DbpA; n=1;... 100 6e-20
UniRef50_Q9SQV1 Cluster: Probable DEAD-box ATP-dependent RNA hel... 100 6e-20
UniRef50_Q2BP56 Cluster: Putative ATP-dependent RNA helicase; n=... 99 8e-20
UniRef50_Q188H5 Cluster: Putative ATP-dependent RNA helicase; n=... 99 8e-20
UniRef50_Q12QV2 Cluster: DEAD/DEAH box helicase-like protein; n=... 99 8e-20
UniRef50_Q9V3C4 Cluster: CG6539-PA; n=1; Drosophila melanogaster... 99 8e-20
UniRef50_O00148 Cluster: ATP-dependent RNA helicase DDX39; n=27;... 99 8e-20
UniRef50_UPI0000E48294 Cluster: PREDICTED: similar to DEAD (Asp-... 99 1e-19
UniRef50_Q62IF8 Cluster: ATP-dependent RNA helicase RhlE; n=59; ... 99 1e-19
UniRef50_A3EUK2 Cluster: Superfamily II DNA and RNA helicase; n=... 99 1e-19
UniRef50_A4V6K5 Cluster: DEAD box polypeptide 19 protein; n=3; P... 99 1e-19
UniRef50_Q8GY84 Cluster: DEAD-box ATP-dependent RNA helicase 10;... 99 1e-19
UniRef50_Q82T78 Cluster: RhlE; ATP-dependent RNA helicase RhlE; ... 98 1e-19
UniRef50_Q81QF0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 98 1e-19
UniRef50_Q54TJ4 Cluster: Putative uncharacterized protein; n=1; ... 98 1e-19
UniRef50_UPI0000DB7226 Cluster: PREDICTED: similar to Probable A... 98 2e-19
UniRef50_Q2LY23 Cluster: Superfamily II DNA and RNA helicases; n... 98 2e-19
UniRef50_UPI0000498D8E Cluster: ATP-dependent RNA helicase; n=1;... 97 2e-19
UniRef50_Q4S6B9 Cluster: Chromosome 9 SCAF14729, whole genome sh... 97 2e-19
UniRef50_Q81JK1 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 97 2e-19
UniRef50_Q6F0U0 Cluster: ATP-dependent RNA helicase; n=1; Mesopl... 97 2e-19
UniRef50_O83749 Cluster: ATP-dependent RNA helicase; n=2; Trepon... 97 2e-19
UniRef50_Q2BGG8 Cluster: RNA helicase DbpA; n=1; Neptuniibacter ... 97 2e-19
UniRef50_A4LYS0 Cluster: DEAD/DEAH box helicase domain protein; ... 97 2e-19
UniRef50_Q688Z4 Cluster: Putative uncharacterized protein; n=3; ... 97 2e-19
UniRef50_Q8TDD1 Cluster: ATP-dependent RNA helicase DDX54; n=45;... 97 2e-19
UniRef50_Q12B10 Cluster: DEAD/DEAH box helicase-like; n=13; Prot... 97 3e-19
UniRef50_A6G4U7 Cluster: DEAD/DEAH box helicase; n=2; Plesiocyst... 97 3e-19
UniRef50_A0EIJ0 Cluster: Chromosome undetermined scaffold_99, wh... 97 3e-19
UniRef50_Q27268 Cluster: ATP-dependent RNA helicase WM6; n=82; E... 97 3e-19
UniRef50_Q6MBR0 Cluster: Putative ATP-dependent RNA helicase; n=... 97 4e-19
UniRef50_Q5NN72 Cluster: DNA and RNA helicase; n=3; Sphingomonad... 97 4e-19
UniRef50_Q0BSI7 Cluster: ATP-dependent RNA helicase; n=12; Alpha... 97 4e-19
UniRef50_A0UX17 Cluster: DEAD/DEAH box helicase-like; n=5; Clost... 97 4e-19
UniRef50_Q7QQX6 Cluster: GLP_383_7421_6129; n=1; Giardia lamblia... 97 4e-19
UniRef50_Q0FAJ4 Cluster: Dead-box ATP-dependent RNA helicase; n=... 96 6e-19
UniRef50_P54475 Cluster: Probable ATP-dependent RNA helicase yqf... 96 6e-19
UniRef50_P42305 Cluster: ATP-dependent RNA helicase dbpA; n=9; F... 96 6e-19
UniRef50_Q64VR8 Cluster: ATP-dependent RNA helicase DeaD; n=14; ... 96 7e-19
UniRef50_Q2BMZ1 Cluster: ATP-dependent RNA helicase; n=1; Neptun... 96 7e-19
UniRef50_Q9UHL0 Cluster: ATP-dependent RNA helicase DDX25; n=111... 96 7e-19
UniRef50_Q9RKJ0 Cluster: ATP-dependent RNA helicase; n=2; Strept... 95 1e-18
UniRef50_A0M3C7 Cluster: RhlE-like DEAD box family ATP-dependent... 95 1e-18
UniRef50_Q2WF63 Cluster: Putative uncharacterized protein; n=4; ... 95 1e-18
UniRef50_A4UCU0 Cluster: DEAD box polypeptide 47 isoform 1 varia... 95 1e-18
UniRef50_Q978T9 Cluster: ATP-dependent RNA helicase; n=3; Thermo... 95 1e-18
UniRef50_Q9H0S4 Cluster: Probable ATP-dependent RNA helicase DDX... 95 1e-18
UniRef50_Q14NT1 Cluster: Putative atp-dependent rna helicase pro... 95 2e-18
UniRef50_Q0LVA0 Cluster: Helicase-like:DEAD/DEAH box helicase-li... 95 2e-18
UniRef50_A6W6A7 Cluster: DEAD/DEAH box helicase domain protein; ... 95 2e-18
UniRef50_Q09903 Cluster: ATP-dependent RNA helicase drs1; n=1; S... 95 2e-18
UniRef50_UPI0001555979 Cluster: PREDICTED: similar to ATP-depend... 94 2e-18
UniRef50_Q2YZZ9 Cluster: Putative uncharacterized protein; n=1; ... 94 2e-18
UniRef50_A0KZD5 Cluster: DEAD/DEAH box helicase domain protein; ... 94 2e-18
UniRef50_A0KXT6 Cluster: DEAD/DEAH box helicase domain protein; ... 94 2e-18
UniRef50_Q675R0 Cluster: ATP-dependent 61 kDa nucleolar RNA heli... 94 2e-18
UniRef50_Q22MC1 Cluster: Type III restriction enzyme, res subuni... 94 2e-18
UniRef50_A7U5W6 Cluster: DEAD-box helicase 1; n=8; Aconoidasida|... 94 2e-18
UniRef50_Q5KPU1 Cluster: ATP-dependent RNA helicase DBP8; n=2; F... 94 2e-18
UniRef50_UPI00015BD198 Cluster: UPI00015BD198 related cluster; n... 94 3e-18
UniRef50_Q1VL45 Cluster: DEAD/DEAH box helicase-like protein; n=... 94 3e-18
UniRef50_A6NSW7 Cluster: Putative uncharacterized protein; n=1; ... 94 3e-18
UniRef50_A1USG3 Cluster: DEAD/DEAH box helicase domain/helicase ... 94 3e-18
UniRef50_Q81RE0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 93 4e-18
UniRef50_A6QHA1 Cluster: ATP-dependent RNA helicase DEAD/DEAH bo... 93 4e-18
UniRef50_Q5CIF9 Cluster: DEAD-box RNA helicase; n=2; Cryptospori... 93 4e-18
UniRef50_Q17JB5 Cluster: DEAD box ATP-dependent RNA helicase; n=... 93 4e-18
UniRef50_Q9P9G7 Cluster: DEAD-box RNA helicase; n=3; Methanosarc... 93 4e-18
UniRef50_Q9ZRZ8 Cluster: DEAD-box ATP-dependent RNA helicase 28;... 93 4e-18
UniRef50_Q8D6Y8 Cluster: Superfamily II DNA and RNA helicase; n=... 93 5e-18
UniRef50_Q44NG9 Cluster: Helicase, C-terminal:DEAD/DEAH box heli... 93 5e-18
UniRef50_A6DIU5 Cluster: Probable ATP dependent RNA helicase; n=... 93 5e-18
UniRef50_Q93ZG7 Cluster: DEAD-box ATP-dependent RNA helicase 38;... 93 5e-18
UniRef50_Q56XG6 Cluster: DEAD-box ATP-dependent RNA helicase 15;... 93 5e-18
UniRef50_Q89M45 Cluster: ATP-dependent RNA helicase; n=29; cellu... 93 7e-18
UniRef50_Q5FNK0 Cluster: ATP-dependent RNA helicase; n=1; Glucon... 93 7e-18
UniRef50_Q019E9 Cluster: ATP-dependent RNA helicase; n=2; Ostreo... 93 7e-18
UniRef50_A2DH37 Cluster: DEAD/DEAH box helicase family protein; ... 93 7e-18
UniRef50_Q58083 Cluster: Probable ATP-dependent RNA helicase MJ0... 93 7e-18
UniRef50_UPI0000E87E35 Cluster: putative ATP-dependent RNA helic... 92 9e-18
UniRef50_Q9K7L3 Cluster: RNA helicase; n=2; Bacillus|Rep: RNA he... 92 9e-18
UniRef50_Q6YPL1 Cluster: Superfamily II DNA and RNA helicase; n=... 92 9e-18
UniRef50_A6DHU9 Cluster: DEAD/DEAH box helicase-like protein; n=... 92 9e-18
UniRef50_A4EAF2 Cluster: Putative uncharacterized protein; n=1; ... 92 9e-18
UniRef50_Q7QQ49 Cluster: GLP_139_12217_14094; n=1; Giardia lambl... 92 9e-18
UniRef50_Q6A841 Cluster: Putative ATP-dependent RNA helicase; n=... 92 1e-17
UniRef50_Q41FS1 Cluster: IMP dehydrogenase/GMP reductase:Helicas... 92 1e-17
UniRef50_Q4P3U9 Cluster: ATP-dependent rRNA helicase RRP3; n=20;... 92 1e-17
UniRef50_A3BT52 Cluster: DEAD-box ATP-dependent RNA helicase 29;... 92 1e-17
UniRef50_UPI0000499D6F Cluster: DEAD/DEAH box helicase; n=1; Ent... 91 2e-17
UniRef50_Q5FS73 Cluster: ATP-dependent RNA helicase; n=2; Glucon... 91 2e-17
UniRef50_A7HG33 Cluster: DEAD/DEAH box helicase domain protein; ... 91 2e-17
UniRef50_Q5CHB7 Cluster: Putative uncharacterized protein; n=2; ... 91 2e-17
UniRef50_Q5BXU1 Cluster: SJCHGC08663 protein; n=1; Schistosoma j... 91 2e-17
UniRef50_A0CZH3 Cluster: Chromosome undetermined scaffold_32, wh... 91 2e-17
UniRef50_UPI0000DB7667 Cluster: PREDICTED: similar to CG32344-PA... 91 2e-17
UniRef50_Q5QWG1 Cluster: ATP-dependent RNA helicase; n=1; Idioma... 91 2e-17
UniRef50_Q0C4R1 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 91 2e-17
UniRef50_P75172 Cluster: Probable ATP-dependent RNA helicase MG4... 91 2e-17
UniRef50_P32892 Cluster: ATP-dependent RNA helicase DRS1; n=13; ... 91 2e-17
UniRef50_UPI00015B61D8 Cluster: PREDICTED: similar to vasa-like ... 91 3e-17
UniRef50_UPI00006CDDA3 Cluster: CLN3 protein; n=1; Tetrahymena t... 91 3e-17
UniRef50_Q8YH70 Cluster: ATP-DEPENDENT RNA HELICASE RHLE; n=10; ... 91 3e-17
UniRef50_Q6MR64 Cluster: ATP-dependent RNA helicase; n=5; cellul... 91 3e-17
UniRef50_Q6MQY6 Cluster: ATP-dependent RNA helicase; n=1; Bdello... 91 3e-17
UniRef50_Q30SZ2 Cluster: DEAD/DEAH box helicase-like; n=1; Thiom... 91 3e-17
UniRef50_Q1FMF9 Cluster: Helicase-like:DbpA, RNA-binding:DEAD/DE... 91 3e-17
UniRef50_Q7QP86 Cluster: GLP_397_1016_18; n=1; Giardia lamblia A... 91 3e-17
UniRef50_Q8L4E9 Cluster: DEAD-box ATP-dependent RNA helicase 36;... 91 3e-17
UniRef50_UPI00003C8469 Cluster: hypothetical protein Faci_030017... 90 4e-17
UniRef50_Q8D7D0 Cluster: Superfamily II DNA and RNA helicase; n=... 90 4e-17
UniRef50_Q28T45 Cluster: DEAD/DEAH box helicase-like protein; n=... 90 4e-17
UniRef50_Q1I3W1 Cluster: ATP-dependent RNA helicase RhlE, DEAD b... 90 4e-17
UniRef50_Q087U7 Cluster: DEAD/DEAH box helicase domain protein; ... 90 4e-17
UniRef50_A1VA48 Cluster: DEAD/DEAH box helicase domain protein; ... 90 4e-17
UniRef50_Q95XM9 Cluster: Putative uncharacterized protein; n=2; ... 90 4e-17
UniRef50_Q7QTB2 Cluster: GLP_15_13424_14974; n=2; Giardia intest... 90 4e-17
UniRef50_P0C2N8 Cluster: ATP-dependent RNA helicase drs-1; n=16;... 90 4e-17
UniRef50_P0C2N7 Cluster: ATP-dependent RNA helicase DRS1; n=2; C... 90 4e-17
UniRef50_Q9VHP0 Cluster: ATP-dependent RNA helicase bel; n=4; Pr... 90 4e-17
UniRef50_Q836U7 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 90 5e-17
UniRef50_Q81LV0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 90 5e-17
UniRef50_Q480Z7 Cluster: ATP-dependent RNA helicase, DEAD box fa... 90 5e-17
UniRef50_A5FH33 Cluster: DEAD/DEAH box helicase domain protein; ... 90 5e-17
UniRef50_A2DFG9 Cluster: DEAD/DEAH box helicase family protein; ... 90 5e-17
UniRef50_Q8SRB2 Cluster: ATP-dependent RNA helicase DBP2; n=103;... 90 5e-17
UniRef50_Q87HW1 Cluster: ATP-dependent RNA helicase, DEAD box fa... 89 6e-17
UniRef50_Q30P62 Cluster: DEAD/DEAH box helicase-like; n=1; Thiom... 89 6e-17
UniRef50_Q11TW3 Cluster: Possible ATP-dependent RNA helicase; n=... 89 6e-17
UniRef50_Q4UBP8 Cluster: RNA helicase, putative; n=4; Eukaryota|... 89 6e-17
UniRef50_Q8L7S8 Cluster: DEAD-box ATP-dependent RNA helicase 3; ... 89 6e-17
UniRef50_P21693 Cluster: ATP-independent RNA helicase dbpA; n=19... 89 6e-17
UniRef50_Q5BFU7 Cluster: ATP-dependent RNA helicase dbp10; n=14;... 89 9e-17
UniRef50_Q6A6U7 Cluster: ATP-dependent RNA helicase; n=3; Actino... 89 1e-16
UniRef50_Q11UI8 Cluster: DEAD box-related helicase; n=3; Sphingo... 89 1e-16
UniRef50_A6TX49 Cluster: DEAD/DEAH box helicase domain protein; ... 89 1e-16
UniRef50_A6GPV2 Cluster: Helicase; n=1; Limnobacter sp. MED105|R... 89 1e-16
UniRef50_A0RP33 Cluster: Putative ATP-dependent RNA helicase Rhl... 89 1e-16
UniRef50_Q8MZI3 Cluster: GH10652p; n=2; Drosophila melanogaster|... 89 1e-16
UniRef50_Q3ZDP1 Cluster: Vasa-like protein; n=7; Neoptera|Rep: V... 89 1e-16
UniRef50_O49289 Cluster: Putative DEAD-box ATP-dependent RNA hel... 89 1e-16
UniRef50_A5E058 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 89 1e-16
UniRef50_Q5KME7 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 89 1e-16
UniRef50_Q2H0R2 Cluster: ATP-dependent RNA helicase DBP10; n=1; ... 89 1e-16
UniRef50_O07897 Cluster: Heat resistant RNA dependent ATPase; n=... 88 1e-16
UniRef50_A6Q8Y9 Cluster: ATP-dependent RNA helicase, DEAD-box fa... 88 1e-16
UniRef50_Q9SEV5 Cluster: RNA helicase; n=1; Guillardia theta|Rep... 88 1e-16
UniRef50_Q014Y7 Cluster: RNA helicase-like protein; n=2; Ostreoc... 88 1e-16
UniRef50_A7P4J7 Cluster: Chromosome chr4 scaffold_6, whole genom... 88 1e-16
UniRef50_Q22308 Cluster: Putative uncharacterized protein; n=7; ... 88 1e-16
UniRef50_P09052 Cluster: ATP-dependent RNA helicase vasa; n=5; E... 88 1e-16
UniRef50_Q96GQ7 Cluster: Probable ATP-dependent RNA helicase DDX... 88 1e-16
UniRef50_UPI0000DAE40A Cluster: hypothetical protein Rgryl_01000... 88 2e-16
UniRef50_Q3SF48 Cluster: DEAD/DEAH box helicase; n=6; cellular o... 88 2e-16
UniRef50_Q1N6E2 Cluster: ATP-dependent RNA helicase; n=1; Oceano... 88 2e-16
UniRef50_A4RYJ1 Cluster: Predicted protein; n=3; Ostreococcus|Re... 88 2e-16
UniRef50_A0T1H5 Cluster: SF2-family helicase; n=6; Plasmodium|Re... 88 2e-16
UniRef50_O22907 Cluster: DEAD-box ATP-dependent RNA helicase 24;... 88 2e-16
UniRef50_UPI00015B6038 Cluster: PREDICTED: similar to DEAD box A... 87 3e-16
UniRef50_Q31EF0 Cluster: ATP-dependent RNA helicase; n=1; Thiomi... 87 3e-16
UniRef50_O66866 Cluster: ATP-dependent RNA helicase DeaD; n=1; A... 87 3e-16
UniRef50_A6CFZ8 Cluster: ATP-dependent RNA helicase; n=1; Planct... 87 3e-16
UniRef50_A4C6L9 Cluster: ATP-dependent RNA helicase, DEAD box fa... 87 3e-16
UniRef50_A4C0F9 Cluster: ATP-dependent RNA helicase; n=6; Bacter... 87 3e-16
UniRef50_A3ZXX1 Cluster: ATP-dependent RNA helicase; n=2; Planct... 87 3e-16
UniRef50_Q16JA8 Cluster: DEAD box ATP-dependent RNA helicase; n=... 87 3e-16
UniRef50_A2DSJ0 Cluster: DEAD/DEAH box helicase family protein; ... 87 3e-16
UniRef50_Q7RYZ7 Cluster: ATP-dependent RNA helicase dbp-8; n=15;... 87 3e-16
UniRef50_Q7MT81 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 87 3e-16
UniRef50_Q4FSS4 Cluster: Possible ATP-dependent DEAD/DEAH box RN... 87 3e-16
UniRef50_Q7QNT5 Cluster: GLP_88_2286_3572; n=1; Giardia lamblia ... 87 3e-16
UniRef50_Q4Q1N9 Cluster: DEAD box RNA helicase, putative; n=5; T... 87 3e-16
UniRef50_Q16W98 Cluster: DEAD box ATP-dependent RNA helicase; n=... 87 3e-16
UniRef50_A7AWZ5 Cluster: DEAD/DEAH box helicase and helicase con... 87 3e-16
UniRef50_Q54CD8 Cluster: Putative RNA helicase; n=2; Dictyosteli... 87 5e-16
UniRef50_Q238V7 Cluster: Type III restriction enzyme, res subuni... 87 5e-16
UniRef50_A3QMD4 Cluster: Putative uncharacterized protein mel-46... 87 5e-16
UniRef50_Q3EBD3 Cluster: DEAD-box ATP-dependent RNA helicase 41;... 87 5e-16
UniRef50_Q4P9P3 Cluster: ATP-dependent RNA helicase DRS1; n=1; U... 87 5e-16
UniRef50_Q9NQI0 Cluster: Probable ATP-dependent RNA helicase DDX... 87 5e-16
UniRef50_Q41F45 Cluster: Helicase, C-terminal:DEAD/DEAH box heli... 86 6e-16
UniRef50_A1G315 Cluster: DEAD/DEAH box helicase-like; n=2; Salin... 86 6e-16
UniRef50_A4S6F2 Cluster: Predicted protein; n=1; Ostreococcus lu... 86 6e-16
UniRef50_Q1AG34 Cluster: Ded1-like DEAD-box RNA helicase; n=1; C... 86 6e-16
UniRef50_A7U5W7 Cluster: DEAD-box helicase 2; n=6; Plasmodium|Re... 86 6e-16
UniRef50_A2DP01 Cluster: DEAD/DEAH box helicase family protein; ... 86 6e-16
UniRef50_A6QYH1 Cluster: 2-isopropylmalate synthase; n=4; Ascomy... 86 6e-16
UniRef50_P93008 Cluster: DEAD-box ATP-dependent RNA helicase 21;... 86 6e-16
UniRef50_Q03532 Cluster: ATP-dependent RNA helicase HAS1; n=70; ... 86 6e-16
UniRef50_Q8EPZ1 Cluster: ATP-dependent RNA helicase; n=2; Bacill... 86 8e-16
UniRef50_Q5GRS8 Cluster: Superfamily II DNA/RNA helicase; n=4; W... 86 8e-16
UniRef50_A1KUM8 Cluster: Putative ATP-dependent RNA helicase; n=... 86 8e-16
UniRef50_Q9VXW2 Cluster: CG6227-PA; n=11; Coelomata|Rep: CG6227-... 86 8e-16
UniRef50_Q9GNP1 Cluster: Vasa homolog; n=18; Eumetazoa|Rep: Vasa... 86 8e-16
UniRef50_A6N5Z1 Cluster: Helicase; n=7; Plasmodium|Rep: Helicase... 86 8e-16
UniRef50_Q5JKF2 Cluster: DEAD-box ATP-dependent RNA helicase 40;... 86 8e-16
UniRef50_Q0UMB6 Cluster: ATP-dependent RNA helicase DBP10; n=1; ... 86 8e-16
UniRef50_UPI0000D5571E Cluster: PREDICTED: similar to CG5800-PA;... 85 1e-15
UniRef50_Q01EH4 Cluster: Ddx49 Ddx49-related DEAD box helicase s... 85 1e-15
UniRef50_Q965K2 Cluster: Putative uncharacterized protein; n=2; ... 85 1e-15
UniRef50_Q5N7W4 Cluster: DEAD-box ATP-dependent RNA helicase 30;... 85 1e-15
UniRef50_Q4IF76 Cluster: ATP-dependent RNA helicase DBP2; n=4; F... 85 1e-15
UniRef50_A4R5B8 Cluster: ATP-dependent RNA helicase DBP10; n=2; ... 85 1e-15
UniRef50_Q4V836 Cluster: MGC114699 protein; n=9; Deuterostomia|R... 85 1e-15
UniRef50_Q9KNA4 Cluster: ATP-dependent RNA helicase, DEAD box fa... 85 1e-15
UniRef50_A5EYB1 Cluster: ATP-dependent rna helicase Rhl; n=2; Ga... 85 1e-15
UniRef50_Q869P0 Cluster: Similar to Homo sapiens (Human). DEAD/D... 85 1e-15
UniRef50_P21507 Cluster: ATP-dependent RNA helicase srmB; n=82; ... 85 1e-15
UniRef50_Q4PEX7 Cluster: ATP-dependent RNA helicase DBP8; n=1; U... 85 1e-15
UniRef50_UPI000155CE2F Cluster: PREDICTED: similar to R27090_2; ... 85 2e-15
UniRef50_Q7VQL9 Cluster: Cold-shock DEAD-box protein A, inducibl... 85 2e-15
UniRef50_Q30YG9 Cluster: DEAD/DEAH box helicase-like; n=3; Delta... 85 2e-15
UniRef50_Q18W60 Cluster: DEAD/DEAH box helicase-like; n=2; Desul... 85 2e-15
UniRef50_Q11WD3 Cluster: Possible ATP-dependent RNA helicase; n=... 85 2e-15
UniRef50_A6PQ62 Cluster: DEAD/DEAH box helicase domain protein; ... 85 2e-15
UniRef50_A3I404 Cluster: Putative uncharacterized protein; n=1; ... 85 2e-15
UniRef50_Q5D9C4 Cluster: SJCHGC09528 protein; n=1; Schistosoma j... 85 2e-15
UniRef50_Q54Y81 Cluster: Putative RNA helicase; n=2; Dictyosteli... 85 2e-15
UniRef50_Q4W7T7 Cluster: VASA RNA helicase; n=3; Daphniidae|Rep:... 85 2e-15
UniRef50_Q5BF42 Cluster: Putative uncharacterized protein; n=1; ... 85 2e-15
UniRef50_Q9Y7T7 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 85 2e-15
UniRef50_Q0M1B5 Cluster: Helicase-like:DEAD/DEAH box helicase-li... 84 2e-15
UniRef50_Q0HKH0 Cluster: DEAD/DEAH box helicase domain protein; ... 84 2e-15
UniRef50_A1UCR5 Cluster: DEAD/DEAH box helicase domain protein; ... 84 2e-15
UniRef50_A2DES1 Cluster: DEAD/DEAH box helicase family protein; ... 84 2e-15
UniRef50_P44701 Cluster: ATP-dependent RNA helicase srmB homolog... 84 2e-15
UniRef50_Q88NB7 Cluster: ATP-dependent RNA helicase rhlB; n=18; ... 84 2e-15
UniRef50_Q10RI7 Cluster: DEAD-box ATP-dependent RNA helicase 38;... 84 2e-15
UniRef50_Q6BML1 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 84 2e-15
UniRef50_Q9NR30 Cluster: Nucleolar RNA helicase 2; n=51; Euteleo... 84 2e-15
UniRef50_Q92AT6 Cluster: Lin1833 protein; n=13; Listeria|Rep: Li... 84 3e-15
UniRef50_Q89IS2 Cluster: Cold-shock dead-box protein A; n=28; Al... 84 3e-15
UniRef50_Q03GJ4 Cluster: Superfamily II DNA and RNA helicase; n=... 84 3e-15
UniRef50_A5DU73 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 84 3e-15
UniRef50_Q92GV2 Cluster: ATP-dependent RNA helicase RhlE; n=10; ... 83 4e-15
UniRef50_Q2J6D3 Cluster: DEAD/DEAH box helicase-like; n=2; Frank... 83 4e-15
UniRef50_Q1MYS3 Cluster: Probable ATP-dependent RNA helicase; n=... 83 4e-15
UniRef50_A2EQ41 Cluster: DEAD/DEAH box helicase family protein; ... 83 4e-15
UniRef50_A2ED04 Cluster: DEAD/DEAH box helicase family protein; ... 83 4e-15
UniRef50_A3H9E9 Cluster: DEAD/DEAH box helicase-like; n=1; Caldi... 83 4e-15
UniRef50_Q9C551 Cluster: DEAD-box ATP-dependent RNA helicase 5; ... 83 4e-15
UniRef50_Q4IP34 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 83 4e-15
UniRef50_Q4IBS2 Cluster: ATP-dependent RNA helicase MAK5; n=2; S... 83 4e-15
UniRef50_Q62J95 Cluster: ATP-dependent RNA helicase RhlE, putati... 56 5e-15
UniRef50_Q2S6I0 Cluster: ATP-dependent RNA helicase; n=1; Salini... 83 6e-15
UniRef50_A4S294 Cluster: Predicted protein; n=1; Ostreococcus lu... 83 6e-15
UniRef50_Q9Y6V7 Cluster: Probable ATP-dependent RNA helicase DDX... 83 6e-15
UniRef50_UPI0000499ECF Cluster: DEAD/DEAH box helicase; n=1; Ent... 83 7e-15
UniRef50_Q0AR94 Cluster: DEAD/DEAH box helicase domain protein; ... 83 7e-15
UniRef50_A4S6M9 Cluster: Predicted protein; n=3; Ostreococcus|Re... 83 7e-15
UniRef50_A3AD37 Cluster: Putative uncharacterized protein; n=2; ... 83 7e-15
UniRef50_Q7JQN4 Cluster: LD15481p; n=7; Endopterygota|Rep: LD154... 83 7e-15
UniRef50_Q4JG17 Cluster: Vasa-like protein; n=1; Litopenaeus van... 83 7e-15
UniRef50_Q07886 Cluster: Probable ATP-dependent RNA helicase Dbp... 83 7e-15
UniRef50_P20447 Cluster: ATP-dependent RNA helicase DBP3; n=20; ... 83 7e-15
UniRef50_Q1Q4V2 Cluster: Similar to ATP-independent RNA helicase... 82 1e-14
UniRef50_A4BHZ9 Cluster: ATP-dependent RNA helicase; n=1; Reinek... 82 1e-14
UniRef50_A3PFY9 Cluster: DEAD/DEAH box helicase domain protein; ... 82 1e-14
UniRef50_Q9GV13 Cluster: Vasa-related protein CnVAS1; n=3; Eumet... 82 1e-14
UniRef50_Q95QN2 Cluster: Putative uncharacterized protein; n=2; ... 82 1e-14
UniRef50_Q7K4L8 Cluster: LD33749p; n=1; Drosophila melanogaster|... 82 1e-14
UniRef50_Q4W7T8 Cluster: VASA RNA helicase; n=1; Artemia francis... 82 1e-14
UniRef50_Q6C7X8 Cluster: ATP-dependent RNA helicase DBP10; n=3; ... 82 1e-14
UniRef50_Q5VQL1-2 Cluster: Isoform 2 of Q5VQL1 ; n=2; Magnolioph... 82 1e-14
UniRef50_Q9KKW0 Cluster: ATP-dependent RNA helicase, DEAD box fa... 82 1e-14
UniRef50_Q4PNH7 Cluster: Putative cold-shock dead-box protein A;... 82 1e-14
UniRef50_A4B385 Cluster: ATP-dependent RNA helicase, DEAD box fa... 82 1e-14
UniRef50_A4AFV6 Cluster: ATP-dependent RNA helicase; n=3; Actino... 82 1e-14
UniRef50_Q9SWV9 Cluster: Ethylene-responsive RNA helicase; n=5; ... 82 1e-14
UniRef50_A5BHG9 Cluster: Putative uncharacterized protein; n=1; ... 82 1e-14
UniRef50_Q54VF1 Cluster: Putative uncharacterized protein; n=1; ... 82 1e-14
UniRef50_Q16T16 Cluster: DEAD box ATP-dependent RNA helicase; n=... 82 1e-14
UniRef50_O97032 Cluster: DjVLGB; n=2; Dugesia|Rep: DjVLGB - Duge... 82 1e-14
UniRef50_A6VWX2 Cluster: DEAD/DEAH box helicase domain protein; ... 81 2e-14
UniRef50_Q9LKL6 Cluster: DEAD box protein P68; n=5; Viridiplanta... 81 2e-14
UniRef50_Q869K2 Cluster: Similar to Dictyostelium discoideum (Sl... 81 2e-14
UniRef50_Q65XX1 Cluster: Vasa-and belle-like helicase protein 1,... 81 2e-14
UniRef50_Q8IV96 Cluster: DDX6 protein; n=8; Eukaryota|Rep: DDX6 ... 81 2e-14
UniRef50_Q97WT0 Cluster: ATP-dependent RNA helicase; n=4; Sulfol... 81 2e-14
UniRef50_Q8SR49 Cluster: ATP-dependent rRNA helicase SPB4; n=1; ... 81 2e-14
UniRef50_P20448 Cluster: ATP-dependent RNA helicase DBP4; n=13; ... 81 2e-14
UniRef50_UPI00004994C0 Cluster: DEAD/DEAH box helicase; n=2; Ent... 81 2e-14
UniRef50_UPI00004988F8 Cluster: DEAD/DEAH box helicase; n=1; Ent... 81 2e-14
UniRef50_Q4RK69 Cluster: Chromosome 2 SCAF15032, whole genome sh... 81 2e-14
UniRef50_Q6APU7 Cluster: Related to ATP-dependent RNA helicase; ... 81 2e-14
UniRef50_Q03YT1 Cluster: Superfamily II DNA and RNA helicase; n=... 81 2e-14
UniRef50_A6FEC9 Cluster: ATP-dependent RNA helicase, DEAD box fa... 81 2e-14
UniRef50_A3WBM2 Cluster: Cold-shock dead-box protein A; n=1; Ery... 81 2e-14
UniRef50_Q55RL6 Cluster: Putative uncharacterized protein; n=2; ... 81 2e-14
UniRef50_Q9DF36 Cluster: RNA helicase II/Gu; n=9; Tetrapoda|Rep:... 81 3e-14
UniRef50_A6DML6 Cluster: ATP-dependent RNA helicase; n=1; Lentis... 81 3e-14
UniRef50_Q8EJQ5 Cluster: ATP-dependent RNA helicase rhlB; n=62; ... 81 3e-14
UniRef50_A0K1H7 Cluster: DEAD/DEAH box helicase domain protein; ... 80 4e-14
UniRef50_A4S3A0 Cluster: Predicted protein; n=2; Ostreococcus|Re... 80 4e-14
UniRef50_Q4Y0X7 Cluster: DEAD-box RNA helicase, putative; n=2; P... 80 4e-14
UniRef50_Q4P7Y2 Cluster: Putative uncharacterized protein; n=1; ... 80 4e-14
UniRef50_UPI0000D573C1 Cluster: PREDICTED: similar to CG8611-PA,... 80 5e-14
UniRef50_Q8D3Y6 Cluster: ATP-dependent RNA helicase, DEAD box fa... 80 5e-14
UniRef50_Q1WSN6 Cluster: ATP-dependent RNA helicase; n=1; Lactob... 80 5e-14
UniRef50_A1FEC3 Cluster: DEAD/DEAH box helicase-like; n=21; Gamm... 80 5e-14
UniRef50_Q012E3 Cluster: DEAD-box protein abstrakt; n=1; Ostreoc... 80 5e-14
UniRef50_A4S107 Cluster: Predicted protein; n=1; Ostreococcus lu... 80 5e-14
UniRef50_Q16XX4 Cluster: DEAD box ATP-dependent RNA helicase; n=... 80 5e-14
UniRef50_A7APE7 Cluster: DEAD/DEAH box helicase domain containin... 80 5e-14
UniRef50_Q1E273 Cluster: Putative uncharacterized protein; n=2; ... 80 5e-14
UniRef50_Q8SR63 Cluster: ATP-dependent rRNA helicase RRP3; n=1; ... 80 5e-14
UniRef50_Q9M2F9 Cluster: DEAD-box ATP-dependent RNA helicase 52;... 80 5e-14
UniRef50_Q10202 Cluster: ATP-dependent RNA helicase dbp3; n=1; S... 80 5e-14
UniRef50_Q5QVE4 Cluster: ATP-dependent RNA helicase; n=2; Idioma... 79 7e-14
UniRef50_Q4QJG6 Cluster: ATP-dependent RNA helicase, putative; n... 79 7e-14
UniRef50_Q4N5F8 Cluster: ATP-dependent RNA helicase, putative; n... 79 7e-14
UniRef50_Q6FU81 Cluster: ATP-dependent RNA helicase MSS116, mito... 79 7e-14
UniRef50_P38719 Cluster: ATP-dependent RNA helicase DBP8; n=14; ... 79 7e-14
UniRef50_UPI00004987FF Cluster: DEAD/DEAH box helicase; n=5; Ent... 79 9e-14
UniRef50_A6VX62 Cluster: DEAD/DEAH box helicase domain protein; ... 79 9e-14
UniRef50_Q7R0K7 Cluster: GLP_154_39979_41331; n=1; Giardia lambl... 79 9e-14
UniRef50_Q4JF01 Cluster: Vasa homlogue; n=2; Eukaryota|Rep: Vasa... 79 9e-14
UniRef50_Q388E8 Cluster: ATP-dependent DEAD/H RNA helicase, puta... 79 9e-14
UniRef50_A7RKF5 Cluster: Predicted protein; n=1; Nematostella ve... 79 9e-14
UniRef50_Q9HXE5 Cluster: ATP-dependent RNA helicase rhlB; n=22; ... 79 9e-14
UniRef50_Q9P7C7 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 79 9e-14
UniRef50_Q8F0Q7 Cluster: ATP-dependent RNA helicase; n=4; Leptos... 79 1e-13
UniRef50_Q8D563 Cluster: Superfamily II DNA and RNA helicase; n=... 79 1e-13
UniRef50_Q88XN5 Cluster: ATP-dependent RNA helicase; n=2; Lactob... 79 1e-13
UniRef50_A2EVI2 Cluster: DEAD/DEAH box helicase family protein; ... 79 1e-13
UniRef50_Q6FML5 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 79 1e-13
UniRef50_Q5KIK3 Cluster: ATP-dependent RNA helicase DRS1; n=1; F... 79 1e-13
UniRef50_Q5T1V6 Cluster: Probable ATP-dependent RNA helicase DDX... 79 1e-13
UniRef50_P24784 Cluster: ATP-dependent RNA helicase DBP1; n=103;... 79 1e-13
UniRef50_Q4QIG1 Cluster: ATP-dependent DEAD/H RNA helicase, puta... 78 2e-13
UniRef50_Q8NHQ9 Cluster: ATP-dependent RNA helicase DDX55; n=86;... 78 2e-13
UniRef50_Q9NVP1 Cluster: ATP-dependent RNA helicase DDX18; n=24;... 78 2e-13
UniRef50_Q5BYH3 Cluster: SJCHGC05414 protein; n=1; Schistosoma j... 78 2e-13
UniRef50_Q6KZC2 Cluster: ATP-dependent RNA helicase; n=1; Picrop... 78 2e-13
UniRef50_Q8H0U8 Cluster: DEAD-box ATP-dependent RNA helicase 42;... 78 2e-13
UniRef50_Q6BLU9 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 78 2e-13
UniRef50_O74393 Cluster: ATP-dependent RNA helicase mak5; n=1; S... 78 2e-13
UniRef50_UPI00015609AE Cluster: PREDICTED: similar to DEAD (Asp-... 77 3e-13
UniRef50_Q1LSH5 Cluster: DEAD/DEAH box helicase-like protein pre... 77 3e-13
UniRef50_A2U4F0 Cluster: Putative ATP-dependent RNA helicase; n=... 77 3e-13
UniRef50_A7P8T9 Cluster: Chromosome chr3 scaffold_8, whole genom... 77 3e-13
UniRef50_Q1JSQ3 Cluster: Dead-box helicase, putative; n=1; Toxop... 77 3e-13
UniRef50_A2DB16 Cluster: DEAD/DEAH box helicase family protein; ... 77 3e-13
UniRef50_A7TJK8 Cluster: Putative uncharacterized protein; n=1; ... 77 3e-13
UniRef50_UPI0000498707 Cluster: DEAD/DEAH box helicase; n=1; Ent... 77 4e-13
UniRef50_Q22T03 Cluster: DEAD/DEAH box helicase family protein; ... 77 4e-13
UniRef50_Q53FI9 Cluster: Nucleolar protein GU2 variant; n=3; Eut... 77 4e-13
UniRef50_A6RW79 Cluster: Putative uncharacterized protein; n=1; ... 77 4e-13
UniRef50_Q9BUQ8 Cluster: Probable ATP-dependent RNA helicase DDX... 77 4e-13
UniRef50_Q8I416 Cluster: ATP-dependent RNA helicase, putative; n... 77 5e-13
UniRef50_A7SE71 Cluster: Predicted protein; n=1; Nematostella ve... 77 5e-13
>UniRef50_P38919 Cluster: Eukaryotic initiation factor 4A-III;
n=366; root|Rep: Eukaryotic initiation factor 4A-III -
Homo sapiens (Human)
Length = 411
Score = 291 bits (714), Expect = 1e-77
Identities = 138/180 (76%), Positives = 160/180 (88%)
Frame = +1
Query: 112 MTSSEVSSNRKILSEDLSNVEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQ 291
M +S + R + ED++ VEF+TSE+V+V PTFD+MGLR++LLRGIY YGFEKPSAIQQ
Sbjct: 7 MATSGSARKRLLKEEDMTKVEFETSEEVDVTPTFDTMGLREDLLRGIYAYGFEKPSAIQQ 66
Query: 292 RSILPIVKGRDVIAQAQSGTGKTATFSISILQTLDTTLRETQVLILSPTRELATQIQKVI 471
R+I I+KGRDVIAQ+QSGTGKTATFSIS+LQ LD +RETQ LIL+PTRELA QIQK +
Sbjct: 67 RAIKQIIKGRDVIAQSQSGTGKTATFSISVLQCLDIQVRETQALILAPTRELAVQIQKGL 126
Query: 472 LALGDFMNVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVL 651
LALGD+MNVQCHACIGGTN+GEDIRKLDYGQHVV+GTPGRVFDMIRRR LRTR+IKMLVL
Sbjct: 127 LALGDYMNVQCHACIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRAIKMLVL 186
>UniRef50_A2AAP7 Cluster: DEAD (Asp-Glu-Ala-Asp) box polypeptide 48;
n=5; Fungi/Metazoa group|Rep: DEAD (Asp-Glu-Ala-Asp) box
polypeptide 48 - Mus musculus (Mouse)
Length = 299
Score = 238 bits (582), Expect = 9e-62
Identities = 122/180 (67%), Positives = 143/180 (79%)
Frame = +1
Query: 112 MTSSEVSSNRKILSEDLSNVEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQ 291
M +S + R + ED++ VEF+TSE+V+V PTFD+MGLR++LLRGIY YGFEKPSAIQQ
Sbjct: 7 MATSGSARKRLLKEEDMTKVEFETSEEVDVTPTFDTMGLREDLLRGIYAYGFEKPSAIQQ 66
Query: 292 RSILPIVKGRDVIAQAQSGTGKTATFSISILQTLDTTLRETQVLILSPTRELATQIQKVI 471
R+I I+KGRDVIAQ+QSGTGKTATFS+S+LQ LD IQ +
Sbjct: 67 RAIKQIIKGRDVIAQSQSGTGKTATFSVSVLQCLD--------------------IQG-L 105
Query: 472 LALGDFMNVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVL 651
LALGD+MNVQCHACIGGTN+GEDIRKLDYGQHVV+GTPGRVFDMIRRR LRTR+IKMLVL
Sbjct: 106 LALGDYMNVQCHACIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRAIKMLVL 165
>UniRef50_Q14240 Cluster: Eukaryotic initiation factor 4A-II; n=37;
Bilateria|Rep: Eukaryotic initiation factor 4A-II - Homo
sapiens (Human)
Length = 407
Score = 215 bits (524), Expect = 1e-54
Identities = 102/153 (66%), Positives = 122/153 (79%), Gaps = 1/153 (0%)
Frame = +1
Query: 196 EVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSI 375
E++ FD M L++ LLRGIY YGFEKPSAIQQR+I+P +KG DVIAQAQSGTGKTATF+I
Sbjct: 30 EIVDNFDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKGYDVIAQAQSGTGKTATFAI 89
Query: 376 SILQTLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLD 555
SILQ L+ +ETQ L+L+PTRELA QIQKVILALGD+M CHACIGGTN+ +++KL
Sbjct: 90 SILQQLEIEFKETQALVLAPTRELAQQIQKVILALGDYMGATCHACIGGTNVRNEMQKLQ 149
Query: 556 -YGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVL 651
H+V GTPGRVFDM+ RR L + IKM VL
Sbjct: 150 AEAPHIVVGTPGRVFDMLNRRYLSPKWIKMFVL 182
>UniRef50_A0D232 Cluster: Chromosome undetermined scaffold_35, whole
genome shotgun sequence; n=5; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_35,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 434
Score = 169 bits (412), Expect = 4e-41
Identities = 79/178 (44%), Positives = 120/178 (67%), Gaps = 1/178 (0%)
Frame = +1
Query: 121 SEVSSNRKILSEDLSNVEFDTSED-VEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRS 297
S + + ++ L + D E+ +E + TF+ + L +LLRGI++YGFE+PSAIQQ++
Sbjct: 27 SFIQNKKEHLKNIMDQQTQDLQENWIEQVETFEDLTLSKDLLRGIFSYGFERPSAIQQKA 86
Query: 298 ILPIVKGRDVIAQAQSGTGKTATFSISILQTLDTTLRETQVLILSPTRELATQIQKVILA 477
I PI+ G+DV+AQAQSGTGKT TF+I LQ +D R+TQV+IL+P RELA QI V+
Sbjct: 87 IKPIILGKDVLAQAQSGTGKTGTFTIGALQRIDPNQRKTQVIILAPVRELAKQIYDVVKG 146
Query: 478 LGDFMNVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVL 651
+G ++N++ CIGGT+ E K G H++ TPGR+ DM++ + L +++LV+
Sbjct: 147 IGQYLNIEAFCCIGGTSTQETREKCKQGVHIIIATPGRLIDMMKNKYLDATFMRLLVV 204
>UniRef50_A5BYF4 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 377
Score = 164 bits (398), Expect = 2e-39
Identities = 84/165 (50%), Positives = 117/165 (70%)
Frame = +1
Query: 13 SFPLVI*KFRF*EIFTYRLTCYFKNLEAN*IRKMTSSEVSSNRKILSEDLSNVEFDTSED 192
SFPL+ K + EI YR+ K++ A M + R +D + F+T+E
Sbjct: 215 SFPLLQLKSKSKEIGRYRVR--EKSMAATATTSMVPANRGGCRNSAVDD-EKLVFETTEG 271
Query: 193 VEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFS 372
VE+I +FD MG++++LLRGIY Y FEKPSA+QQR++LPI++G DVIAQAQSGTGKT+ F+
Sbjct: 272 VELIMSFDQMGIKNDLLRGIYAYSFEKPSAVQQRAVLPIIQGHDVIAQAQSGTGKTSMFA 331
Query: 373 ISILQTLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCH 507
+++ Q +DT+ RE Q LI SPTRELA+Q +KVILA+GD +N+Q H
Sbjct: 332 LTVYQMVDTSNREVQALISSPTRELASQTEKVILAIGDSVNIQAH 376
>UniRef50_A0BEU9 Cluster: Chromosome undetermined scaffold_102,
whole genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_102,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 395
Score = 152 bits (369), Expect = 6e-36
Identities = 70/162 (43%), Positives = 110/162 (67%)
Frame = +1
Query: 166 NVEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQS 345
NVE+ T+E+ + TF+SM LR ELLRGI +GF +P +QQR+++P+++GRDV+ Q
Sbjct: 9 NVEWKTNEEPIIQSTFESMKLRKELLRGINAFGFIRPLEVQQRALVPLIQGRDVVIQNFR 68
Query: 346 GTGKTATFSISILQTLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGT 525
TGKT S+S+L D ++++ QVLIL TR+L + +I+ALG F+NV HAC G
Sbjct: 69 STGKTTVMSLSVLSIFDLSVKKIQVLILQKTRKLTEENAGLIMALGKFLNVSIHACSEGN 128
Query: 526 NLGEDIRKLDYGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVL 651
++ +DI + G +V GTP RVF++++R+ + +KM++L
Sbjct: 129 SIQDDISVVQQGVQIVLGTPDRVFELVQRKEISFAHLKMIIL 170
>UniRef50_A2EPG4 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 389
Score = 143 bits (346), Expect = 4e-33
Identities = 70/168 (41%), Positives = 111/168 (66%)
Frame = +1
Query: 148 LSEDLSNVEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDV 327
+SE + +F ++ +EV PT++SM L+ EL+ I G+EKPS IQQR+I I +G+++
Sbjct: 1 MSEVHEDRQFQSNVPLEVYPTWESMKLKPELIEAIKKNGWEKPSPIQQRAIYIISQGKNI 60
Query: 328 IAQAQSGTGKTATFSISILQTLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCH 507
+ Q+Q+G+GKTATFSI L L T + T+++I+SPTRELA Q + + +LG
Sbjct: 61 MFQSQNGSGKTATFSIGTLARLRLTSKTTELIIVSPTRELAIQTENTLKSLG----ANTR 116
Query: 508 ACIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVL 651
AC+GG +LG D++ L G H VSGTPGR+ +++ ++ ++ +VL
Sbjct: 117 ACVGGNSLGADVKALQKGIHCVSGTPGRILQLLKEHNIQAEKVQSVVL 164
>UniRef50_Q4T4A9 Cluster: Chromosome undetermined SCAF9757, whole
genome shotgun sequence; n=2; Euteleostomi|Rep:
Chromosome undetermined SCAF9757, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 215
Score = 137 bits (331), Expect = 2e-31
Identities = 65/90 (72%), Positives = 76/90 (84%)
Frame = +1
Query: 199 VIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSIS 378
V+ FD M L++ LLRG+Y YGFEKPSAIQQR+ILP +KG DVIAQAQSGTGKTATF IS
Sbjct: 28 VVDNFDDMNLKESLLRGVYAYGFEKPSAIQQRAILPCIKGHDVIAQAQSGTGKTATFVIS 87
Query: 379 ILQTLDTTLRETQVLILSPTRELATQIQKV 468
ILQ +DT+L+ETQ LIL+PTRELA Q K+
Sbjct: 88 ILQRIDTSLKETQALILAPTRELAQQEWKL 117
>UniRef50_P39517 Cluster: ATP-dependent RNA helicase DHH1; n=103;
Eukaryota|Rep: ATP-dependent RNA helicase DHH1 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 506
Score = 133 bits (321), Expect = 4e-30
Identities = 64/148 (43%), Positives = 92/148 (62%)
Frame = +1
Query: 208 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 387
TF+ L+ ELL GI+ GFEKPS IQ+ +I + GRD++A+A++GTGKTA F I L+
Sbjct: 47 TFEDFYLKRELLMGIFEAGFEKPSPIQEEAIPVAITGRDILARAKNGTGKTAAFVIPTLE 106
Query: 388 TLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQH 567
+ L + Q LI+ PTRELA Q +V+ LG + C GGTNL +DI +L+ H
Sbjct: 107 KVKPKLNKIQALIMVPTRELALQTSQVVRTLGKHCGISCMVTTGGTNLRDDILRLNETVH 166
Query: 568 VVSGTPGRVFDMIRRRVLRTRSIKMLVL 651
++ GTPGRV D+ R+V + ++
Sbjct: 167 ILVGTPGRVLDLASRKVADLSDCSLFIM 194
>UniRef50_Q8SQM5 Cluster: ATP-dependent RNA helicase eIF4A; n=1;
Encephalitozoon cuniculi|Rep: ATP-dependent RNA helicase
eIF4A - Encephalitozoon cuniculi
Length = 425
Score = 130 bits (315), Expect = 2e-29
Identities = 67/156 (42%), Positives = 96/156 (61%)
Frame = +1
Query: 184 SEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTA 363
S + + T++ GL+++LL+GIY+ GFE PS IQ+ +I PI+ GRD+ AQAQSGTGKT
Sbjct: 31 SSQIRMFDTWEDYGLKEDLLKGIYSIGFETPSFIQKAAIQPIIDGRDIRAQAQSGTGKTG 90
Query: 364 TFSISILQTLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDI 543
F+++ LQ D + TQ+L+L+ TRE+A Q LG FM + GG+ + D
Sbjct: 91 AFAVAALQICDMSQDVTQILVLASTREIAAQNAARFEDLGCFMGARVALLSGGSPIAADK 150
Query: 544 RKLDYGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVL 651
L+ H+V GTPGRV MI L +IK+ V+
Sbjct: 151 VALEKKPHIVVGTPGRVEHMININELSMDNIKLFVI 186
>UniRef50_Q4SP80 Cluster: Chromosome 15 SCAF14542, whole genome
shotgun sequence; n=5; Euteleostomi|Rep: Chromosome 15
SCAF14542, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 366
Score = 130 bits (313), Expect = 4e-29
Identities = 61/87 (70%), Positives = 72/87 (82%)
Frame = +1
Query: 196 EVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSI 375
E+ FD M L++ LLRGIY YGFEKPSAIQQR+I+P +KG DVIAQAQSGTGKTATF+I
Sbjct: 32 EITDNFDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKGYDVIAQAQSGTGKTATFAI 91
Query: 376 SILQTLDTTLRETQVLILSPTRELATQ 456
SILQ L+ +ETQ L+L+PTRELA Q
Sbjct: 92 SILQQLEIDQKETQALVLAPTRELAQQ 118
>UniRef50_Q5KJI2 Cluster: ATP-dependent RNA helicase DHH1; n=4;
Dikarya|Rep: ATP-dependent RNA helicase DHH1 -
Cryptococcus neoformans (Filobasidiella neoformans)
Length = 625
Score = 129 bits (311), Expect = 7e-29
Identities = 65/132 (49%), Positives = 89/132 (67%), Gaps = 1/132 (0%)
Frame = +1
Query: 211 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 390
F+ GLR ELL GIYT GFE+PS IQ+++I + GRD++A+A++GTGKTA+F I L
Sbjct: 38 FEDFGLRRELLMGIYTAGFERPSPIQEQAIPMALTGRDILARAKNGTGKTASFIIPTLNR 97
Query: 391 LDTTLRETQVLILSPTRELATQIQKVILALGDFM-NVQCHACIGGTNLGEDIRKLDYGQH 567
++T+L Q LIL PTRELA Q +V LG + N+Q GGT L +DI +L H
Sbjct: 98 INTSLSHIQALILVPTRELALQTSQVCKTLGAHIPNLQVMITTGGTTLRDDILRLQQPVH 157
Query: 568 VVSGTPGRVFDM 603
++ GTPGR+ D+
Sbjct: 158 ILVGTPGRILDL 169
>UniRef50_UPI000065E01D Cluster: Homolog of Brachydanio rerio
"Eukaryotic translation initiation factor 4A, isoform
1A.; n=1; Takifugu rubripes|Rep: Homolog of Brachydanio
rerio "Eukaryotic translation initiation factor 4A,
isoform 1A. - Takifugu rubripes
Length = 357
Score = 123 bits (297), Expect(2) = 7e-29
Identities = 57/92 (61%), Positives = 75/92 (81%)
Frame = +1
Query: 202 IPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISI 381
+ +F+ M L + LLRGI+ YGFEKPSAIQQ++I+P +KG DVIAQ+QSGTGKTAT+ I+
Sbjct: 20 VDSFEGMMLNENLLRGIFAYGFEKPSAIQQQAIVPCIKGFDVIAQSQSGTGKTATYVIAA 79
Query: 382 LQTLDTTLRETQVLILSPTRELATQIQKVILA 477
LQ +D +TQ +IL+PTRELA QIQKV+L+
Sbjct: 80 LQRIDMMKEDTQAIILAPTRELANQIQKVVLS 111
Score = 26.6 bits (56), Expect(2) = 7e-29
Identities = 10/21 (47%), Positives = 17/21 (80%)
Frame = +1
Query: 589 RVFDMIRRRVLRTRSIKMLVL 651
RVFD++ RR + ++I++LVL
Sbjct: 112 RVFDVLARRAVSAKAIRLLVL 132
>UniRef50_A4FZ46 Cluster: DEAD/DEAH box helicase domain protein;
n=4; Euryarchaeota|Rep: DEAD/DEAH box helicase domain
protein - Methanococcus maripaludis
Length = 541
Score = 127 bits (306), Expect = 3e-28
Identities = 62/149 (41%), Positives = 96/149 (64%), Gaps = 1/149 (0%)
Frame = +1
Query: 208 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKG-RDVIAQAQSGTGKTATFSISIL 384
+F ++GL DE+L + GF P+ IQ+++I +++G RD++ QAQ+GTGKTA F I IL
Sbjct: 3 SFKNLGLSDEILEALEKKGFTTPTPIQEQAIPILIEGKRDIVGQAQTGTGKTAAFGIPIL 62
Query: 385 QTLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQ 564
+T+D + R TQ LIL+PTRELA Q+ + I ++ + GG ++ IR+L G
Sbjct: 63 ETIDESSRNTQALILAPTRELAIQVAEEIDSIKGSKRLNVFPVYGGQSIDRQIRELRRGV 122
Query: 565 HVVSGTPGRVFDMIRRRVLRTRSIKMLVL 651
+V GTPGR+ D I RR ++ ++ +VL
Sbjct: 123 QIVVGTPGRILDHISRRTIKLENVSYVVL 151
>UniRef50_Q67NW1 Cluster: ATP-dependent RNA helicase; n=5;
Firmicutes|Rep: ATP-dependent RNA helicase -
Symbiobacterium thermophilum
Length = 526
Score = 124 bits (300), Expect = 1e-27
Identities = 62/148 (41%), Positives = 93/148 (62%)
Frame = +1
Query: 208 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 387
TF + L +++L+ + GFE+PS IQ ++I +++G+DVI QAQ+GTGKTA F + I++
Sbjct: 7 TFRDLALSEKVLKALDDMGFEEPSPIQAQAIPALLQGKDVIGQAQTGTGKTAAFGVPIVE 66
Query: 388 TLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQH 567
L R Q L+L+PTRELA Q+ + I +G V+ A GG ++ IR L +G
Sbjct: 67 RLVPGQRAVQALVLTPTRELAIQVAEEITKIGRHARVKTIAIYGGQSIERQIRSLRFGVD 126
Query: 568 VVSGTPGRVFDMIRRRVLRTRSIKMLVL 651
VV GTPGR+ D + R L ++M+VL
Sbjct: 127 VVIGTPGRILDHLGRSTLDLSQVRMVVL 154
>UniRef50_Q1MY97 Cluster: DEAD/DEAH box helicase-like protein; n=2;
Gammaproteobacteria|Rep: DEAD/DEAH box helicase-like
protein - Oceanobacter sp. RED65
Length = 614
Score = 124 bits (298), Expect = 2e-27
Identities = 65/148 (43%), Positives = 92/148 (62%), Gaps = 1/148 (0%)
Frame = +1
Query: 211 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 390
F S+GL LLR I G+E+PS IQ++SI +++G+DV+ AQ+GTGKTA F++ +L
Sbjct: 8 FASLGLPFNLLRAIEEQGYEQPSPIQEQSIPHLLEGKDVLGLAQTGTGKTAAFTLPLLAR 67
Query: 391 LDTTLRETQVLILSPTRELATQIQKVILALGDF-MNVQCHACIGGTNLGEDIRKLDYGQH 567
+RE QVL+L+PTRELA Q+ + + NV+ + GG++ G R L G
Sbjct: 68 TQNEVREPQVLVLAPTRELAQQVAMAVESYSKHESNVKVASIYGGSDFGSQFRALKQGPQ 127
Query: 568 VVSGTPGRVFDMIRRRVLRTRSIKMLVL 651
V GTPGRV D IRR L+ I+ +VL
Sbjct: 128 WVVGTPGRVMDHIRRGTLKLEGIRAVVL 155
>UniRef50_A7HDE9 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Anaeromyxobacter sp. Fw109-5|Rep: DEAD/DEAH box
helicase domain protein - Anaeromyxobacter sp. Fw109-5
Length = 680
Score = 124 bits (298), Expect = 2e-27
Identities = 55/139 (39%), Positives = 90/139 (64%)
Frame = +1
Query: 208 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 387
+FD +GL + + R I +G+E+P+ +Q + P+ G+DVI ++++GTGKTA F+I IL+
Sbjct: 21 SFDELGLSEPVRRAIAEHGYERPTPVQVSTFRPVRDGKDVIVRSKTGTGKTAAFAIPILE 80
Query: 388 TLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQH 567
+ R L++ PTRELA Q+ + AL ++ A GG ++GE ++KL+ G
Sbjct: 81 RIADGRRRPSALVMCPTRELAIQVAQEFTALAKHRDLSVVAVYGGASMGEQLQKLEAGAE 140
Query: 568 VVSGTPGRVFDMIRRRVLR 624
++ GTPGR++D IRRR L+
Sbjct: 141 IIVGTPGRIYDHIRRRTLK 159
>UniRef50_Q81VG0 Cluster: DEAD-box ATP-dependent RNA helicase ydbR;
n=16; cellular organisms|Rep: DEAD-box ATP-dependent RNA
helicase ydbR - Bacillus anthracis
Length = 528
Score = 123 bits (297), Expect = 3e-27
Identities = 57/148 (38%), Positives = 92/148 (62%)
Frame = +1
Query: 208 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 387
TF +GL D LL+ + + GFE+ + IQ +I ++G+D+I QAQ+GTGKTA F + +L
Sbjct: 3 TFRELGLSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPLLD 62
Query: 388 TLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQH 567
+DT Q ++++PTRELA Q+ + + +G V+ GG ++ IR L H
Sbjct: 63 KVDTHKESVQGIVIAPTRELAIQVGEELYKIGKHKRVRILPIYGGQDINRQIRALKKHPH 122
Query: 568 VVSGTPGRVFDMIRRRVLRTRSIKMLVL 651
++ GTPGR+ D I R+ LR ++++ +VL
Sbjct: 123 IIVGTPGRILDHINRKTLRLQNVETVVL 150
>UniRef50_Q4T821 Cluster: Chromosome undetermined SCAF7914, whole
genome shotgun sequence; n=3; Tetraodontidae|Rep:
Chromosome undetermined SCAF7914, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 502
Score = 123 bits (296), Expect = 4e-27
Identities = 59/148 (39%), Positives = 96/148 (64%), Gaps = 1/148 (0%)
Frame = +1
Query: 211 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 390
F+ L+ ELL GI+ G+EKPS IQ+ SI + GRD++A+A++GTGK+ + I +L+
Sbjct: 91 FEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPMLER 150
Query: 391 LDTTLRETQVLILSPTRELATQIQKVILALGDFM-NVQCHACIGGTNLGEDIRKLDYGQH 567
+D Q L+L PTRELA Q+ ++ + + + V+ A GGTNL +DI +LD H
Sbjct: 151 IDLKKDHIQALVLVPTRELALQVSQISIQIAKHLGGVKVMATTGGTNLRDDIMRLDETVH 210
Query: 568 VVSGTPGRVFDMIRRRVLRTRSIKMLVL 651
VV TPGR+ D++++ V + ++++V+
Sbjct: 211 VVIATPGRILDLMKKGVAKVDKVQIMVM 238
>UniRef50_Q8XKJ8 Cluster: ATP-dependent RNA helicase; n=12;
Clostridium|Rep: ATP-dependent RNA helicase -
Clostridium perfringens
Length = 528
Score = 122 bits (294), Expect = 7e-27
Identities = 65/149 (43%), Positives = 89/149 (59%), Gaps = 2/149 (1%)
Frame = +1
Query: 211 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 390
FD +GL++ LL+ I GFE+PS IQ SI ++G D+I QAQ+GTGKTA F +I+
Sbjct: 6 FDDLGLKESLLKAIKDMGFEEPSQIQAESIPVALEGHDIIGQAQTGTGKTAAFGCAIINN 65
Query: 391 LDTT--LRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQ 564
D + + + LIL+PTRELA Q+ + ++ LG + GG + IR L G
Sbjct: 66 ADFSGKKKSPKALILAPTRELAIQVNEELVRLGKHEKLSVLPIYGGQPIDRQIRALKNGV 125
Query: 565 HVVSGTPGRVFDMIRRRVLRTRSIKMLVL 651
+V GTPGRV D+IRR+ L I LVL
Sbjct: 126 DIVVGTPGRVLDLIRRKSLPLNDIGFLVL 154
>UniRef50_Q484Q1 Cluster: RNA helicase DeaD; n=1; Colwellia
psychrerythraea 34H|Rep: RNA helicase DeaD - Colwellia
psychrerythraea (strain 34H / ATCC BAA-681)
(Vibriopsychroerythus)
Length = 611
Score = 121 bits (292), Expect = 1e-26
Identities = 59/165 (35%), Positives = 104/165 (63%), Gaps = 1/165 (0%)
Frame = +1
Query: 160 LSNVEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQA 339
+++ + +T + E + F S+GL + LL + + GF + IQ +I P++ G+DV+ +A
Sbjct: 1 MTDQKTETVTEPEAV-AFASLGLPENLLSAVLSIGFTSATDIQALTIPPLLAGKDVLGEA 59
Query: 340 QSGTGKTATFSISILQTLDTTLRETQVLILSPTRELATQIQKVILALG-DFMNVQCHACI 516
Q+GTGKTA F + L +DT++++ Q+++L+PTRELA Q+ + I + G D ++
Sbjct: 60 QTGTGKTAAFGLPALAKIDTSIKKPQLMVLAPTRELAMQVAEAIESFGKDMKGLRVATLY 119
Query: 517 GGTNLGEDIRKLDYGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVL 651
GG + G ++L+ G VV GTPGR+ D +RR+ L+ +++ VL
Sbjct: 120 GGQSYGPQFQQLERGAQVVVGTPGRLMDHLRRKSLKLDELRVCVL 164
>UniRef50_Q725W5 Cluster: ATP-dependent RNA helicase, DEAD/DEAH
family; n=2; Desulfovibrio vulgaris subsp. vulgaris|Rep:
ATP-dependent RNA helicase, DEAD/DEAH family -
Desulfovibrio vulgaris (strain Hildenborough / ATCC
29579 / NCIMB8303)
Length = 532
Score = 118 bits (284), Expect = 1e-25
Identities = 64/154 (41%), Positives = 90/154 (58%), Gaps = 1/154 (0%)
Frame = +1
Query: 193 VEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFS 372
+E + +F + L +ELL+ I GF +PS IQ +I +++GRDVI QAQ+GTGKTA F
Sbjct: 1 MESVESFKDLPLEEELLKAIEELGFTEPSPIQSIAIPRLLEGRDVIGQAQTGTGKTAAFG 60
Query: 373 ISILQTLDTTLRETQVLILSPTRELATQIQKVILALGDFM-NVQCHACIGGTNLGEDIRK 549
+ +LQ +D R Q L+L PTRELA Q+ + AL + V+ + GG +
Sbjct: 61 LPLLQRIDAADRSVQALVLCPTRELALQVANGLTALAKHLRGVRILSVYGGQPIEPQASA 120
Query: 550 LDYGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVL 651
L G VV GTPGR+ D I R L+ ++M VL
Sbjct: 121 LRRGAQVVVGTPGRILDHINRGTLQLGVVRMTVL 154
>UniRef50_P0A9P8 Cluster: Cold-shock DEAD box protein A; n=54;
Gammaproteobacteria|Rep: Cold-shock DEAD box protein A -
Shigella flexneri
Length = 629
Score = 117 bits (282), Expect = 2e-25
Identities = 61/149 (40%), Positives = 86/149 (57%), Gaps = 1/149 (0%)
Frame = +1
Query: 208 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 387
TF +GL+ +L + G+EKPS IQ I ++ GRDV+ AQ+G+GKTA FS+ +LQ
Sbjct: 7 TFADLGLKAPILEALNDLGYEKPSPIQAECIPHLLNGRDVLGMAQTGSGKTAAFSLPLLQ 66
Query: 388 TLDTTLRETQVLILSPTRELATQIQKVILALGDFM-NVQCHACIGGTNLGEDIRKLDYGQ 564
LD L+ Q+L+L+PTRELA Q+ + + M V A GG +R L G
Sbjct: 67 NLDPELKAPQILVLAPTRELAVQVAEAMTDFSKHMRGVNVVALYGGQRYDVQLRALRQGP 126
Query: 565 HVVSGTPGRVFDMIRRRVLRTRSIKMLVL 651
+V GTPGR+ D ++R L + LVL
Sbjct: 127 QIVVGTPGRLLDHLKRGTLDLSKLSGLVL 155
>UniRef50_UPI00015B4D43 Cluster: PREDICTED: hypothetical protein;
n=1; Nasonia vitripennis|Rep: PREDICTED: hypothetical
protein - Nasonia vitripennis
Length = 990
Score = 117 bits (281), Expect = 3e-25
Identities = 66/170 (38%), Positives = 104/170 (61%), Gaps = 2/170 (1%)
Frame = +1
Query: 148 LSEDLSNVEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVK-GRD 324
++ +LS E + +++ TF MGL ++L G+ GF KPS IQ +SI P+ + G D
Sbjct: 5 IAHNLSAKERTSDIEIQEDVTFSQMGLSQQVLNGLLNCGFHKPSPIQHKSI-PLGRCGFD 63
Query: 325 VIAQAQSGTGKTATFSISILQTLDTTLRETQVLILSPTRELATQIQKVILALG-DFMNVQ 501
+I +A+SGTGKTA F I L+ +D + QV+IL+PTRE+A QI++VI +LG + ++
Sbjct: 64 LIVRAKSGTGKTAVFGIIALEMIDIKISSVQVIILAPTREIAIQIKEVIASLGCEIKGLK 123
Query: 502 CHACIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVL 651
+ IGG + D +KL H+ G PGRV +I + L+ +++ VL
Sbjct: 124 VESFIGGVAMDIDRKKLS-NCHIAIGAPGRVKHLIDKGYLKMDHVRLFVL 172
>UniRef50_Q1QYG3 Cluster: DEAD/DEAH box helicase-like protein; n=1;
Chromohalobacter salexigens DSM 3043|Rep: DEAD/DEAH box
helicase-like protein - Chromohalobacter salexigens
(strain DSM 3043 / ATCC BAA-138 / NCIMB13768)
Length = 568
Score = 116 bits (280), Expect = 4e-25
Identities = 62/150 (41%), Positives = 88/150 (58%), Gaps = 1/150 (0%)
Frame = +1
Query: 205 PTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISIL 384
PTF + L +L + T G+E PS IQ ++I +++GRDV+ QAQ+GTGKTA F++ +L
Sbjct: 9 PTFAELSLPSTILSTLETLGYETPSLIQAKTIPALLEGRDVLGQAQTGTGKTAAFALPLL 68
Query: 385 QTLDTTLRETQVLILSPTRELATQIQKVILALG-DFMNVQCHACIGGTNLGEDIRKLDYG 561
LD RE QVL+L+PTRELA Q+ + G ++ + GG E + L G
Sbjct: 69 SRLDLQRREPQVLVLAPTRELAQQVAASFVQYGRGVKGLEVLSLCGGQEYREQLSGLRRG 128
Query: 562 QHVVSGTPGRVFDMIRRRVLRTRSIKMLVL 651
V+ GTPGRV D + R L+ + LVL
Sbjct: 129 AQVIVGTPGRVIDHLDRGSLKLDGLNALVL 158
>UniRef50_A2TP65 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family protein; n=13; Bacteroidetes|Rep: ATP-dependent
RNA helicase, DEAD/DEAH box family protein - Dokdonia
donghaensis MED134
Length = 638
Score = 116 bits (280), Expect = 4e-25
Identities = 63/150 (42%), Positives = 92/150 (61%), Gaps = 2/150 (1%)
Frame = +1
Query: 208 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIV-KGRDVIAQAQSGTGKTATFSISIL 384
TFD +GL LL+ I GFE PS IQ+ +I ++ + RD++A AQ+GTGKTA F +L
Sbjct: 2 TFDQLGLNAPLLQAIADMGFETPSKIQEEAIPQLLAEDRDMVALAQTGTGKTAAFGFPLL 61
Query: 385 QTLDTTLRETQVLILSPTRELATQI-QKVILALGDFMNVQCHACIGGTNLGEDIRKLDYG 561
Q +D + + TQ LI++PTREL QI ++ L V+ A GG+N+ E R++ G
Sbjct: 62 QNIDASSKTTQGLIIAPTRELCLQITNEMKLYAKHIKGVRVVAVYGGSNIQEQAREISRG 121
Query: 562 QHVVSGTPGRVFDMIRRRVLRTRSIKMLVL 651
+V TPGR+ DM+RRR++ + VL
Sbjct: 122 AQIVVATPGRMQDMMRRRMVDITKLSYCVL 151
>UniRef50_UPI0000566899 Cluster: UPI0000566899 related cluster; n=1;
Mus musculus|Rep: UPI0000566899 UniRef100 entry - Mus
musculus
Length = 449
Score = 115 bits (277), Expect = 9e-25
Identities = 58/148 (39%), Positives = 95/148 (64%), Gaps = 1/148 (0%)
Frame = +1
Query: 211 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 390
F+ L+ ELL GI+ G+E PS+IQ+ SI + GRD++A+A++GTGK+ + I +L+
Sbjct: 84 FEDYCLKRELLIGIFEMGWE-PSSIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLER 142
Query: 391 LDTTLRETQVLILSPTRELATQIQKVILALGDFM-NVQCHACIGGTNLGEDIRKLDYGQH 567
LD Q +++ PTRELA Q+ ++ + + M + A GGTNL +D+ +LD H
Sbjct: 143 LDLKKDNIQAMVIVPTRELALQVSQICIQVSKHMGGAKVMATTGGTNLRDDVMRLDDTGH 202
Query: 568 VVSGTPGRVFDMIRRRVLRTRSIKMLVL 651
VV TPGR+ D+I++ + + ++M+VL
Sbjct: 203 VVIATPGRILDLIKKCLEKVDHVQMVVL 230
>UniRef50_Q11QF9 Cluster: Inducible ATP-independent RNA helicase;
n=1; Cytophaga hutchinsonii ATCC 33406|Rep: Inducible
ATP-independent RNA helicase - Cytophaga hutchinsonii
(strain ATCC 33406 / NCIMB 9469)
Length = 457
Score = 115 bits (276), Expect = 1e-24
Identities = 56/150 (37%), Positives = 92/150 (61%), Gaps = 2/150 (1%)
Frame = +1
Query: 208 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKG-RDVIAQAQSGTGKTATFSISIL 384
TF +GL LL+ + PS IQQ++I I+ ++V+ AQ+GTGKTA F + +L
Sbjct: 2 TFSDLGLNAALLQSLSENNISSPSEIQQKAIPVILNSTKNVVGVAQTGTGKTAAFGLPVL 61
Query: 385 QTLDTTLRETQVLILSPTRELATQIQKVILALGDF-MNVQCHACIGGTNLGEDIRKLDYG 561
Q ++ +L++TQVL+L PTREL Q+ K + + + + A GG + E I+KL+
Sbjct: 62 QQINPSLQQTQVLVLVPTRELGQQVAKDLFVFSRYIVRIHTEAVYGGKKIEEQIKKLETP 121
Query: 562 QHVVSGTPGRVFDMIRRRVLRTRSIKMLVL 651
+H++ TPGR+ D+I R+ + ++K L+L
Sbjct: 122 KHILVATPGRLLDLIARKAVNLSNLKYLIL 151
>UniRef50_Q5L3G9 Cluster: DEAD-box ATP-dependent RNA helicase ydbR;
n=7; Bacteria|Rep: DEAD-box ATP-dependent RNA helicase
ydbR - Geobacillus kaustophilus
Length = 467
Score = 114 bits (274), Expect = 2e-24
Identities = 57/148 (38%), Positives = 87/148 (58%)
Frame = +1
Query: 208 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 387
TF +GL E+++ I GFE+ + IQ ++I ++ +DVI QAQ+GTGKTA F I I++
Sbjct: 3 TFQELGLSQEVMKAIERMGFEETTPIQAKTIPLSLQNKDVIGQAQTGTGKTAAFGIPIVE 62
Query: 388 TLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQH 567
++ Q L+++PTRELA Q+ + + +G V+ GG ++ IR L H
Sbjct: 63 KVNVKNSAVQALVVAPTRELAIQVSEELYKIGAVKRVRVLPIYGGQDIERQIRALKKHPH 122
Query: 568 VVSGTPGRVFDMIRRRVLRTRSIKMLVL 651
V+ GTPGR+ D I R LR + +VL
Sbjct: 123 VIVGTPGRIIDHINRGTLRLEHVHTVVL 150
>UniRef50_Q9UHI6 Cluster: Probable ATP-dependent RNA helicase DDX20;
n=24; Eumetazoa|Rep: Probable ATP-dependent RNA helicase
DDX20 - Homo sapiens (Human)
Length = 824
Score = 114 bits (274), Expect = 2e-24
Identities = 69/170 (40%), Positives = 102/170 (60%), Gaps = 3/170 (1%)
Frame = +1
Query: 151 SEDLSNVEFDTSEDVEVIPT-FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVK-GRD 324
++DLS+ T + + P F+S+ L +L G+ GFE+PS +Q ++I P+ + G D
Sbjct: 43 AQDLSSPRTRTGDVLLAEPADFESLLLSRPVLEGLRAAGFERPSPVQLKAI-PLGRCGLD 101
Query: 325 VIAQAQSGTGKTATFSISILQTLDTTLRETQVLILSPTRELATQIQKVILALGDFM-NVQ 501
+I QA+SGTGKT FS L +L TQ+LIL+PTRE+A QI VI A+G M ++
Sbjct: 102 LIVQAKSGTGKTCVFSTIALDSLVLENLSTQILILAPTREIAVQIHSVITAIGIKMEGLE 161
Query: 502 CHACIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVL 651
CH IGGT L +D +L H+ G+PGR+ +I L SI++ +L
Sbjct: 162 CHVFIGGTPLSQDKTRLK-KCHIAVGSPGRIKQLIELDYLNPGSIRLFIL 210
>UniRef50_Q9KAA6 Cluster: ATP-dependent RNA helicase; n=5;
Firmicutes|Rep: ATP-dependent RNA helicase - Bacillus
halodurans
Length = 539
Score = 113 bits (273), Expect = 3e-24
Identities = 60/152 (39%), Positives = 89/152 (58%)
Frame = +1
Query: 196 EVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSI 375
E + F+ + + +E+ + I GFE+PS IQ ++I I+ G DVI QAQ+GTGKTA F I
Sbjct: 3 EAMIKFNELQIGEEIKKAIIEMGFEEPSPIQAKAIPAILAGGDVIGQAQTGTGKTAAFGI 62
Query: 376 SILQTLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLD 555
+++ + T R Q LIL+PTRELA Q+ I L ++ GG ++ I+ L
Sbjct: 63 PVVEKVSTG-RHVQALILTPTRELAIQVSGEIQKLSKHKKIRTLPIYGGQSIVHQIKALK 121
Query: 556 YGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVL 651
G VV GTPGR+ D +RR+ L + ++L
Sbjct: 122 QGVQVVIGTPGRIIDHLRRKTLILDHVNTVIL 153
>UniRef50_Q8YXJ0 Cluster: ATP-dependent RNA helicase; n=11;
Cyanobacteria|Rep: ATP-dependent RNA helicase - Anabaena
sp. (strain PCC 7120)
Length = 513
Score = 113 bits (272), Expect = 3e-24
Identities = 55/148 (37%), Positives = 87/148 (58%)
Frame = +1
Query: 208 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 387
+F +G+ E + + GF P+ IQ ++I ++ GRDV+ Q+Q+GTGKTA FS+ IL+
Sbjct: 4 SFPELGISQERVEHLEKLGFTAPTNIQAQAIPQLLSGRDVVGQSQTGTGKTAAFSLPILE 63
Query: 388 TLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQH 567
LD + Q ++L+PTRELA Q+ + ++ A GG ++ + +L G H
Sbjct: 64 RLDPQQKAVQAIVLTPTRELAIQVHDAMAQFVGNSGLRTLAIYGGQSIDRQMLQLKRGVH 123
Query: 568 VVSGTPGRVFDMIRRRVLRTRSIKMLVL 651
+V GTPGRV D++ R L+ +K VL
Sbjct: 124 IVVGTPGRVIDLLERGNLKLDQVKWFVL 151
>UniRef50_Q11UP8 Cluster: ATP-dependent RNA helicase; n=1; Cytophaga
hutchinsonii ATCC 33406|Rep: ATP-dependent RNA helicase
- Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB
9469)
Length = 580
Score = 113 bits (272), Expect = 3e-24
Identities = 56/148 (37%), Positives = 89/148 (60%), Gaps = 1/148 (0%)
Frame = +1
Query: 211 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 390
F +GL E++ I + G+ + + IQ+++I ++ G+D+ QAQ+GTGKTA F I ++
Sbjct: 3 FKDLGLSPEVVEAIESIGYSEATPIQEKTIPILMTGKDLTGQAQTGTGKTAAFGIPAIEH 62
Query: 391 LDTTLRETQVLILSPTRELATQIQKVILALGDF-MNVQCHACIGGTNLGEDIRKLDYGQH 567
+D ++ +TQ LIL PTRELA Q+ + L F ++ A GG ++ IR L G H
Sbjct: 63 VDISINQTQSLILCPTRELALQVCTELKKLSKFKKGLRVLAVYGGESIERQIRDLKAGAH 122
Query: 568 VVSGTPGRVFDMIRRRVLRTRSIKMLVL 651
+V GTPGR+ D + RR L + ++L
Sbjct: 123 IVVGTPGRIIDHLDRRTLNASHLSQIIL 150
>UniRef50_Q3AFI3 Cluster: ATP-dependent RNA helicase, DEAD box
family; n=1; Carboxydothermus hydrogenoformans
Z-2901|Rep: ATP-dependent RNA helicase, DEAD box family
- Carboxydothermus hydrogenoformans (strain Z-2901 / DSM
6008)
Length = 430
Score = 113 bits (271), Expect = 5e-24
Identities = 57/147 (38%), Positives = 89/147 (60%)
Frame = +1
Query: 211 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 390
F +GL LL+ + GFE P+ IQ+ +I I++G +++ QA +GTGKTA + + +LQ
Sbjct: 4 FKKLGLITPLLKAVNDLGFEMPTPIQKEAIPLILEGHNLVGQAPTGTGKTAAYLLPVLQR 63
Query: 391 LDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQHV 570
+ ++ QVLI++PTRELA Q+ + LG ++ V+ A GG + IR L G V
Sbjct: 64 IQRG-KKAQVLIVTPTRELALQVADEVAKLGKYLKVRALAVYGGQAIERQIRGLRQGVEV 122
Query: 571 VSGTPGRVFDMIRRRVLRTRSIKMLVL 651
+ GTPGR+ D I R+ IK+++L
Sbjct: 123 IVGTPGRILDHIGRKTFPAAEIKIVIL 149
>UniRef50_A4BET4 Cluster: DEAD/DEAH box helicase-like protein; n=1;
Reinekea sp. MED297|Rep: DEAD/DEAH box helicase-like
protein - Reinekea sp. MED297
Length = 579
Score = 113 bits (271), Expect = 5e-24
Identities = 59/149 (39%), Positives = 86/149 (57%), Gaps = 1/149 (0%)
Frame = +1
Query: 208 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 387
TF +GL LL+ + + G+E P+ IQ ++I+ ++ G DV+ AQ+GTGKTA FS+ +L
Sbjct: 6 TFADLGLAPVLLKTLDSLGYETPTPIQSQAIVQLLDGNDVLGLAQTGTGKTAAFSLPLLS 65
Query: 388 TLDTTLRETQVLILSPTRELATQIQKVILALGDFM-NVQCHACIGGTNLGEDIRKLDYGQ 564
+DTT + Q L+L PTRELA Q+ + + N GG ++ +R L
Sbjct: 66 RIDTTKNKPQALVLCPTRELAIQVAEAFQTYARGVDNFHVLPIYGGADMRNQLRALKQNP 125
Query: 565 HVVSGTPGRVFDMIRRRVLRTRSIKMLVL 651
V+ GTPGRV D +RR L +K LVL
Sbjct: 126 QVIVGTPGRVMDHLRRGTLDLSDLKHLVL 154
>UniRef50_Q49K88 Cluster: DEAD box RNA helicase; n=1; Toxoplasma
gondii|Rep: DEAD box RNA helicase - Toxoplasma gondii
Length = 479
Score = 112 bits (270), Expect = 6e-24
Identities = 63/152 (41%), Positives = 91/152 (59%), Gaps = 1/152 (0%)
Frame = +1
Query: 199 VIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSIS 378
V PTF S+GL EL + T G++ P+AIQ + ++GRD+IA A++G+GKTA F +
Sbjct: 49 VSPTFASLGLCSELCASVSTLGWKSPTAIQSEVLPYALQGRDIIALAETGSGKTAAFGLP 108
Query: 379 ILQTLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDY 558
ILQ L + LIL+PTREL QI + ILA+G + V +GG + L
Sbjct: 109 ILQRLLQRTQRFYALILAPTRELCLQISQQILAMGGTLGVTVVTLVGGLDHNTQAIALAK 168
Query: 559 GQHVVSGTPGRVFDMIRR-RVLRTRSIKMLVL 651
HVV G+PGRV D +++ + +S+K+LVL
Sbjct: 169 KPHVVVGSPGRVVDHLQQTKGFSLKSVKVLVL 200
>UniRef50_Q7VFA9 Cluster: ATP-dependent RNA helicase DeaD; n=6;
Helicobacteraceae|Rep: ATP-dependent RNA helicase DeaD -
Helicobacter hepaticus
Length = 530
Score = 112 bits (269), Expect = 8e-24
Identities = 61/147 (41%), Positives = 92/147 (62%)
Frame = +1
Query: 211 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 390
FD GL+D +L+GI GF PS +Q +SI I++G+D+IAQAQ+GTGKTA F+I IL T
Sbjct: 47 FDVFGLKDFVLKGIREAGFSTPSPVQSQSIPIILQGKDLIAQAQTGTGKTAAFAIPILNT 106
Query: 391 LDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQHV 570
L+ ++ + LI++PTRELA QI + IL LG F ++ GG ++ L+
Sbjct: 107 LNRN-KDIEALIITPTRELAMQISEEILKLGRFGRIKTICMYGGQSIKRQCDLLEKKPKA 165
Query: 571 VSGTPGRVFDMIRRRVLRTRSIKMLVL 651
+ TPGR+ D ++ + S +++VL
Sbjct: 166 MIATPGRLLDHLQNGRIAHFSPQIVVL 192
>UniRef50_A6H0L1 Cluster: Probable ATP-dependent RNA helicase,
DEAD/DEAH box family; n=1; Flavobacterium psychrophilum
JIP02/86|Rep: Probable ATP-dependent RNA helicase,
DEAD/DEAH box family - Flavobacterium psychrophilum
(strain JIP02/86 / ATCC 49511)
Length = 644
Score = 112 bits (269), Expect = 8e-24
Identities = 58/149 (38%), Positives = 86/149 (57%), Gaps = 2/149 (1%)
Frame = +1
Query: 211 FDSMGLRDELLRGIYTYGFEKPSAIQQRSI-LPIVKGRDVIAQAQSGTGKTATFSISILQ 387
F+ +GL + LLR I GFE P+ +Q+++I + + K D++A AQ+GTGKTA F ++Q
Sbjct: 4 FEQLGLTESLLRAIIDLGFENPTEVQEKAIPMLLEKDIDLVALAQTGTGKTAAFGFPVIQ 63
Query: 388 TLDTTLRETQVLILSPTRELATQIQKVILALGDF-MNVQCHACIGGTNLGEDIRKLDYGQ 564
+D R TQ LILSPTREL QI + + + A GG ++ E R + G
Sbjct: 64 KIDANNRNTQALILSPTRELCLQITNELKNYSKYEKGINVVAVYGGASITEQARDIKRGA 123
Query: 565 HVVSGTPGRVFDMIRRRVLRTRSIKMLVL 651
++ TPGR+ DMI RR++ I +L
Sbjct: 124 QIIVATPGRMQDMINRRLVDISQINYCIL 152
>UniRef50_A6DL95 Cluster: Probable ATP-dependent RNA helicase; n=1;
Lentisphaera araneosa HTCC2155|Rep: Probable
ATP-dependent RNA helicase - Lentisphaera araneosa
HTCC2155
Length = 482
Score = 112 bits (269), Expect = 8e-24
Identities = 59/148 (39%), Positives = 92/148 (62%), Gaps = 1/148 (0%)
Frame = +1
Query: 211 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 390
F +GL+ +L IYT G++KP+ IQ +S+ I++G+D + +A++GTGKTA F+I LQ
Sbjct: 7 FQDLGLKKTILSAIYTAGYKKPTPIQNKSLKIILQGQDALVRAKTGTGKTAAFAIPALQH 66
Query: 391 LDTTLRETQVLILSPTRELATQIQKVILALGDFM-NVQCHACIGGTNLGEDIRKLDYGQH 567
L ++ QVLIL+P REL QI + + LG + N + GG L ++K +G
Sbjct: 67 LRAEVQHPQVLILTPGRELCKQISQEFIKLGKGLENFRVAEVTGGGKL-SGVKKSLHGAQ 125
Query: 568 VVSGTPGRVFDMIRRRVLRTRSIKMLVL 651
V+S TPGR+ D+ + +L + I MLV+
Sbjct: 126 VISATPGRLIDIKEQGLLNSNCINMLVI 153
>UniRef50_P25888 Cluster: Putative ATP-dependent RNA helicase rhlE;
n=122; cellular organisms|Rep: Putative ATP-dependent
RNA helicase rhlE - Escherichia coli (strain K12)
Length = 454
Score = 112 bits (269), Expect = 8e-24
Identities = 57/154 (37%), Positives = 96/154 (62%), Gaps = 6/154 (3%)
Frame = +1
Query: 208 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 387
+FDS+GL ++LR + G+ +P+ IQQ++I +++GRD++A AQ+GTGKTA F++ +LQ
Sbjct: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61
Query: 388 TLDTT------LRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRK 549
L T R + LIL+PTRELA QI + + ++N++ GG ++ + K
Sbjct: 62 HLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMK 121
Query: 550 LDYGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVL 651
L G V+ TPGR+ D+ + ++ +++LVL
Sbjct: 122 LRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVL 155
>UniRef50_P20449 Cluster: ATP-dependent RNA helicase DBP5; n=23;
Dikarya|Rep: ATP-dependent RNA helicase DBP5 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 482
Score = 112 bits (269), Expect = 8e-24
Identities = 62/183 (33%), Positives = 110/183 (60%), Gaps = 2/183 (1%)
Frame = +1
Query: 109 KMTSSEVSSNRKILSEDLSNVEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQ 288
K S + S+ + L++++ D + + +FD +GL ELL+GIY F+KPS IQ
Sbjct: 60 KQEDSNLISSEYEVKVKLADIQADPNSPLYSAKSFDELGLAPELLKGIYAMKFQKPSKIQ 119
Query: 289 QRSILPIVKG--RDVIAQAQSGTGKTATFSISILQTLDTTLRETQVLILSPTRELATQIQ 462
+R++ ++ R++IAQ+QSGTGKTA FS+++L ++ Q + L+P+RELA Q
Sbjct: 120 ERALPLLLHNPPRNMIAQSQSGTGKTAAFSLTMLTRVNPEDASPQAICLAPSRELARQTL 179
Query: 463 KVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIRRRVLRTRSIKM 642
+V+ +G F + + + E ++++ V+ GTPG V D++RR++++ + IK+
Sbjct: 180 EVVQEMGKFTKITSQLIV--PDSFEKNKQIN--AQVIVGTPGTVLDLMRRKLMQLQKIKI 235
Query: 643 LVL 651
VL
Sbjct: 236 FVL 238
>UniRef50_Q8R4Z5 Cluster: DEAD-box corepressor DP103 beta; n=5;
Tetrapoda|Rep: DEAD-box corepressor DP103 beta - Mus
musculus (Mouse)
Length = 505
Score = 111 bits (268), Expect = 1e-23
Identities = 68/170 (40%), Positives = 99/170 (58%), Gaps = 3/170 (1%)
Frame = +1
Query: 151 SEDLSNVEFDTSEDVEVIPT-FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVK-GRD 324
+ D+ T + V P F+S+ L +L G+ GFE+PS +Q ++I P+ + G D
Sbjct: 44 AHDIGGPRTRTGDVVLAEPADFESLLLSRPVLEGLRAAGFERPSPVQLKAI-PLGRCGLD 102
Query: 325 VIAQAQSGTGKTATFSISILQTLDTTLRETQVLILSPTRELATQIQKVILALGDFM-NVQ 501
+I QA+SGTGKT FS L +L TQ+LIL+PTRE+A QI VI A+G M ++
Sbjct: 103 LIVQAKSGTGKTCVFSTIALDSLILENYSTQILILAPTREIAVQIHSVITAIGIKMEGLE 162
Query: 502 CHACIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVL 651
CH IGGT L +D +L H+ G+PGR+ +I L SI++ +L
Sbjct: 163 CHVFIGGTPLSQDKTRLK-KCHIAVGSPGRIKQLIELDYLNPGSIRLFIL 211
>UniRef50_A7JLA3 Cluster: ATP-dependent RNA helicase; n=20;
Francisella|Rep: ATP-dependent RNA helicase -
Francisella tularensis subsp. novicida GA99-3548
Length = 569
Score = 111 bits (268), Expect = 1e-23
Identities = 62/150 (41%), Positives = 89/150 (59%), Gaps = 3/150 (2%)
Frame = +1
Query: 211 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 390
F +GL +++ + G+E P+ IQQ +I I+ GRDV+ QAQ+GTGKTA F++ ++
Sbjct: 9 FSQLGLNQDIVDTVIKLGYENPTPIQQYAIPYILSGRDVLGQAQTGTGKTAAFALPLINN 68
Query: 391 LDTTLRE--TQVLILSPTRELATQIQKVILALGDFMNVQCHACI-GGTNLGEDIRKLDYG 561
+D R+ QVL+L+PTRELA Q+ + A + ACI GG G IR L G
Sbjct: 69 MDLASRDRAPQVLVLAPTRELAIQVAEQFEAFAKNVPNLDVACIYGGQEYGSQIRALKQG 128
Query: 562 QHVVSGTPGRVFDMIRRRVLRTRSIKMLVL 651
VV GT GRV D I + L+ +++ LVL
Sbjct: 129 VKVVVGTTGRVMDHIEKGTLQLDNLRALVL 158
>UniRef50_A0Z0M4 Cluster: ATP-dependent RNA helicase; n=1; marine
gamma proteobacterium HTCC2080|Rep: ATP-dependent RNA
helicase - marine gamma proteobacterium HTCC2080
Length = 582
Score = 111 bits (268), Expect = 1e-23
Identities = 57/148 (38%), Positives = 89/148 (60%), Gaps = 1/148 (0%)
Frame = +1
Query: 211 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 390
F+S+GL D L + + G+E + IQ +I +++GRDV+ AQ+GTGKTA F++ IL
Sbjct: 11 FNSLGLPDFLQENLQSLGYETATPIQAGTIPLLLEGRDVVGLAQTGTGKTAAFALPILAN 70
Query: 391 LDTTLRETQVLILSPTRELATQIQKVILALGDFM-NVQCHACIGGTNLGEDIRKLDYGQH 567
+D +R Q L+L PTRELA Q+ + + G M ++ + GG ++ + ++ L G H
Sbjct: 71 IDVKVRSPQALVLCPTRELAQQVAEAFRSYGRGMGGLRILSIFGGADMRQQLKSLREGTH 130
Query: 568 VVSGTPGRVFDMIRRRVLRTRSIKMLVL 651
+V TPGR+ D I RR + I +VL
Sbjct: 131 IVVATPGRLLDHIERRSIDLTGINAVVL 158
>UniRef50_Q54TF8 Cluster: DEAD-box RNA helicase; n=2; Dictyostelium
discoideum|Rep: DEAD-box RNA helicase - Dictyostelium
discoideum AX4
Length = 465
Score = 111 bits (268), Expect = 1e-23
Identities = 55/159 (34%), Positives = 99/159 (62%), Gaps = 1/159 (0%)
Frame = +1
Query: 178 DTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKG-RDVIAQAQSGTG 354
D + + + TF+ +GL+ ELL+G+Y G+ KPS IQ+ ++ I++ ++IAQ+QSGTG
Sbjct: 61 DPNSPLYSVKTFEELGLKPELLKGVYAMGYNKPSKIQEAALPIIIQSPNNLIAQSQSGTG 120
Query: 355 KTATFSISILQTLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLG 534
KTA F++ +L +D ++ Q + +SPT+ELA Q +VI +G F N++ I +
Sbjct: 121 KTAAFTLGMLNCVDPSINAPQAICISPTKELALQTFEVISKIGQFSNIKPLLYISEIEVP 180
Query: 535 EDIRKLDYGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVL 651
+++ V+ GTPG++ + + ++ L + +KM+VL
Sbjct: 181 KNVT-----NQVIIGTPGKILENVIKKQLSVKFLKMVVL 214
>UniRef50_Q6MN50 Cluster: ATP-dependent RNA helicase; n=1;
Bdellovibrio bacteriovorus|Rep: ATP-dependent RNA
helicase - Bdellovibrio bacteriovorus
Length = 656
Score = 111 bits (267), Expect = 1e-23
Identities = 53/151 (35%), Positives = 92/151 (60%), Gaps = 1/151 (0%)
Frame = +1
Query: 202 IPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKG-RDVIAQAQSGTGKTATFSIS 378
+ F+S GL ++ + GF P+ IQ++++ ++ G D I A +GTGKTA F I
Sbjct: 43 VDNFESFGLSAPVMAAMADMGFTTPTPIQRQALPILLAGANDFIGLASTGTGKTAAFGIP 102
Query: 379 ILQTLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDY 558
+++ +D+T+++TQ L+LSPTRELA Q+ + + LG V+ GG + I +
Sbjct: 103 LIENIDSTVKDTQALVLSPTRELALQVAEQLTLLGKKKGVRVVTIYGGASYRTQIDGIKR 162
Query: 559 GQHVVSGTPGRVFDMIRRRVLRTRSIKMLVL 651
G H+V TPGR+ D + +++++ +S+K +VL
Sbjct: 163 GAHIVVATPGRLVDFLEQKMIKLQSVKTVVL 193
>UniRef50_A7BCL2 Cluster: Putative uncharacterized protein; n=1;
Actinomyces odontolyticus ATCC 17982|Rep: Putative
uncharacterized protein - Actinomyces odontolyticus ATCC
17982
Length = 722
Score = 111 bits (267), Expect = 1e-23
Identities = 63/156 (40%), Positives = 88/156 (56%), Gaps = 1/156 (0%)
Frame = +1
Query: 187 EDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTAT 366
ED + + TF S+GL +E+L + GF P+ IQ +I P+++ RDV+ AQ+GTGKTA
Sbjct: 40 EDTDTV-TFASLGLPEEILAAVTDMGFRVPTPIQAAAIPPLLELRDVVGIAQTGTGKTAA 98
Query: 367 FSISILQTLDTTLRETQVLILSPTRELATQIQKVILAL-GDFMNVQCHACIGGTNLGEDI 543
F + +L +D R Q L+L+PTRELA Q + I + GG+ G I
Sbjct: 99 FGLPLLAIVDADERNVQALVLAPTRELAMQSAQAIEDFAARTARLDVVPVYGGSPYGPQI 158
Query: 544 RKLDYGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVL 651
L G VV GTPGRV D+I + L ++MLVL
Sbjct: 159 GALKRGAQVVVGTPGRVIDLIEKGALDLSHVRMLVL 194
>UniRef50_A1U3D6 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Marinobacter aquaeolei VT8|Rep: DEAD/DEAH box
helicase domain protein - Marinobacter aquaeolei (strain
ATCC 700491 / DSM 11845 / VT8)(Marinobacter
hydrocarbonoclasticus (strain DSM 11845))
Length = 528
Score = 111 bits (266), Expect = 2e-23
Identities = 56/149 (37%), Positives = 84/149 (56%), Gaps = 1/149 (0%)
Frame = +1
Query: 208 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 387
+F +GL +L + G+E PS IQ +SI ++ G ++ AQ+GTGKTA F++ +L
Sbjct: 25 SFAELGLDPAVLEAVSAVGYETPSPIQAQSIPALLAGNHLLGVAQTGTGKTAAFALPLLS 84
Query: 388 TLDTTLRETQVLILSPTRELATQIQKVILALGD-FMNVQCHACIGGTNLGEDIRKLDYGQ 564
+D + E Q+L+L+PTRELA Q+ + F N GG + IR L G
Sbjct: 85 RIDANVAEPQILVLAPTRELAIQVAEAFTTYASKFRNFHVLPIYGGQDFSPQIRGLKRGA 144
Query: 565 HVVSGTPGRVFDMIRRRVLRTRSIKMLVL 651
V+ GTPGR+ D +R+ L+ +K LVL
Sbjct: 145 QVIVGTPGRMLDHLRKGTLKLDGLKALVL 173
>UniRef50_Q0W8H7 Cluster: ATP-dependent RNA helicase; n=1;
uncultured methanogenic archaeon RC-I|Rep: ATP-dependent
RNA helicase - Uncultured methanogenic archaeon RC-I
Length = 497
Score = 111 bits (266), Expect = 2e-23
Identities = 51/147 (34%), Positives = 91/147 (61%)
Frame = +1
Query: 211 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 390
F + L ++R ++ GFE+ + IQ+++I ++G+D+I QA++GTGKTA F I +++
Sbjct: 4 FTELNLTPSIVRAVHEMGFEEATPIQEQAIPLAMEGKDLIGQARTGTGKTAAFGIPMVEA 63
Query: 391 LDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQHV 570
+ T + Q L++ PTRELA Q+ + + +G ++ A GG + ++ L+ H+
Sbjct: 64 IRPTSKGVQGLVVVPTRELAVQVAEELTRIGKVRGIRSVAIYGGQDFRSQVKALEELPHI 123
Query: 571 VSGTPGRVFDMIRRRVLRTRSIKMLVL 651
V GTPGR+ + +RR +RT I++ VL
Sbjct: 124 VVGTPGRLLEHMRREYVRTSDIRIAVL 150
>UniRef50_Q3AX69 Cluster: DEAD/DEAH box helicase-like; n=15;
Cyanobacteria|Rep: DEAD/DEAH box helicase-like -
Synechococcus sp. (strain CC9902)
Length = 624
Score = 110 bits (265), Expect = 2e-23
Identities = 65/180 (36%), Positives = 101/180 (56%), Gaps = 1/180 (0%)
Frame = +1
Query: 115 TSSEVSSNRKILSEDLSNVEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQR 294
+++E S+ +E + V D ++ E FD G + LL+ + G+ PS IQ+
Sbjct: 42 STAEPSTTEASTTEVTAEVTADEAKS-EPQSGFDGFGFSEALLKTLADKGYSDPSPIQKA 100
Query: 295 SILPIVKGRDVIAQAQSGTGKTATFSISILQTLDTTLRETQVLILSPTRELATQIQKVIL 474
+ ++ GRD++ QAQ+GTGKTA F++ +L+ L++ + QVL+L+PTRELA Q+
Sbjct: 101 AFPELMLGRDLVGQAQTGTGKTAAFALPLLERLESGQKTPQVLVLAPTRELAMQVADSFK 160
Query: 475 A-LGDFMNVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVL 651
A +++ A GGT+ I L G VV GTPGRV D +R+ L T + LVL
Sbjct: 161 AYAAGHPHLKVLAVYGGTDFRSQISTLRRGVDVVVGTPGRVMDHMRQGTLDTSGLTSLVL 220
>UniRef50_Q0RTL3 Cluster: Cold-shock DeaD box ATP-dependent RNA
helicase; n=2; Bacteria|Rep: Cold-shock DeaD box
ATP-dependent RNA helicase - Frankia alni (strain
ACN14a)
Length = 608
Score = 110 bits (265), Expect = 2e-23
Identities = 63/163 (38%), Positives = 90/163 (55%), Gaps = 3/163 (1%)
Frame = +1
Query: 172 EFDTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGT 351
+ D +EDV F + LR ELLR + G+E+P+ IQ+ ++ P+V GRD++ QA +GT
Sbjct: 49 DIDPAEDVA---GFAELALRPELLRSLAALGYEEPTPIQREAVPPLVAGRDLLGQAATGT 105
Query: 352 GKTATFSISILQTLD---TTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGG 522
GKTA F++ +L L T Q L+L PTRELA Q+ + I G + + GG
Sbjct: 106 GKTAAFALPLLHRLTDDRTGDHGPQALVLVPTRELAVQVSEAIHRYGRDLGARVLPVYGG 165
Query: 523 TNLGEDIRKLDYGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVL 651
+G +R L G VV TPGR D + R LR + +VL
Sbjct: 166 APIGRQVRALVQGVDVVVATPGRALDHMGRGTLRLDGLHTVVL 208
>UniRef50_A2DVG1 Cluster: DEAD/DEAH box helicase family protein;
n=3; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 478
Score = 110 bits (265), Expect = 2e-23
Identities = 67/154 (43%), Positives = 86/154 (55%), Gaps = 4/154 (2%)
Frame = +1
Query: 202 IPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPI--VKGRDVIAQAQSGTGKTATFSI 375
+ FD M L LL+G+Y+YGF PS IQ +I I R VIAQAQSGTGKT FSI
Sbjct: 90 VDDFDQMDLPPALLQGVYSYGFRAPSEIQAIAIGAIRDPSNRHVIAQAQSGTGKTGAFSI 149
Query: 376 SILQTLDTTLRETQVLILSPTRELATQIQKVILALGD-FMNVQCHACIGGTNLGEDIR-K 549
+L +D + + TQ L+L+PTRELATQI V +G + IGG D + +
Sbjct: 150 GVLSKIDVSQKTTQALVLAPTRELATQIFNVFKEIGSRIPGLDIAIFIGGAQRVVDAQAR 209
Query: 550 LDYGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVL 651
H+ TPGR D+I LR ++ KM VL
Sbjct: 210 AASHPHICICTPGRALDLIVSGHLRVQNFKMAVL 243
>UniRef50_A2SQE1 Cluster: DEAD/DEAH box helicase domain protein;
n=6; cellular organisms|Rep: DEAD/DEAH box helicase
domain protein - Methanocorpusculum labreanum (strain
ATCC 43576 / DSM 4855 / Z)
Length = 656
Score = 110 bits (265), Expect = 2e-23
Identities = 63/154 (40%), Positives = 85/154 (55%), Gaps = 1/154 (0%)
Frame = +1
Query: 193 VEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFS 372
+E TF + +ELL+ I GFE+P+ IQ +I I+ G+DV QAQ+GTGKTA F
Sbjct: 1 MEETKTFAEFAISEELLQAIGDMGFEEPTPIQAMAIPQILDGKDVTGQAQTGTGKTAAFG 60
Query: 373 ISILQTLDTTLRETQVLILSPTRELATQIQKVILALGDF-MNVQCHACIGGTNLGEDIRK 549
I I++ LD + Q L+LSPTRELA Q + L + + GG + +R
Sbjct: 61 IPIIERLDPDNKNVQALVLSPTRELAIQTAEEFSRLMKYKKGLNVVPIYGGQPIERQLRA 120
Query: 550 LDYGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVL 651
L VV GTPGRV D I+R L S+ M +L
Sbjct: 121 LKGTVQVVIGTPGRVIDHIKRGTLHLDSVTMFIL 154
>UniRef50_Q7UNV7 Cluster: ATP-dependent RNA helicase; n=2;
Planctomycetaceae|Rep: ATP-dependent RNA helicase -
Rhodopirellula baltica
Length = 452
Score = 110 bits (264), Expect = 3e-23
Identities = 60/150 (40%), Positives = 87/150 (58%), Gaps = 2/150 (1%)
Frame = +1
Query: 208 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 387
+FD + L + R + GF PS IQ I + G+DVI QA++GTGKTA FSI IL+
Sbjct: 45 SFDELDLSPIMRRAVKDAGFTTPSPIQAALIPHALNGKDVIGQARTGTGKTAAFSIPILE 104
Query: 388 TLDTT--LRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYG 561
LD+ R+ Q +++ PTRELA Q+ L + + GG N+ +R+L+ G
Sbjct: 105 QLDSLEDCRDPQAIVIVPTRELADQVAAEAERLARGVPTEIAVLSGGKNMNRQLRQLENG 164
Query: 562 QHVVSGTPGRVFDMIRRRVLRTRSIKMLVL 651
+V GTPGRV D ++R LRT ++ +VL
Sbjct: 165 TQLVVGTPGRVHDHLQRGTLRTNNVWCVVL 194
>UniRef50_Q5GZA1 Cluster: ATP-dependent RNA helicase; n=6;
Xanthomonas|Rep: ATP-dependent RNA helicase -
Xanthomonas oryzae pv. oryzae
Length = 482
Score = 110 bits (264), Expect = 3e-23
Identities = 60/149 (40%), Positives = 87/149 (58%), Gaps = 2/149 (1%)
Frame = +1
Query: 211 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 390
F ++ L L GI G+ + +Q +S+ PI++G DVIAQA +G+GKTA F + +LQ
Sbjct: 28 FSALPLSPALAPGIDALGYTVLTPVQAQSLPPILRGLDVIAQAPTGSGKTAAFGLGLLQK 87
Query: 391 LDTTLRETQVLILSPTRELATQIQKVILALG-DFMNVQCHACIGGTNLGEDIRKLD-YGQ 564
LD L Q L+L PTRELA Q+ K + L N++ GG LG + L+ +
Sbjct: 88 LDPALTRAQALVLCPTRELADQVGKQLRKLATGIPNMKLVVLTGGMPLGPQLASLEAHDP 147
Query: 565 HVVSGTPGRVFDMIRRRVLRTRSIKMLVL 651
HVV GTPGR+ ++ R+R L ++ LVL
Sbjct: 148 HVVVGTPGRIQELARKRALHLGGVRTLVL 176
>UniRef50_Q26CN9 Cluster: ATP-dependent RNA helicase; n=1;
Flavobacteria bacterium BBFL7|Rep: ATP-dependent RNA
helicase - Flavobacteria bacterium BBFL7
Length = 644
Score = 110 bits (264), Expect = 3e-23
Identities = 59/152 (38%), Positives = 89/152 (58%), Gaps = 2/152 (1%)
Frame = +1
Query: 202 IPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVK-GRDVIAQAQSGTGKTATFSIS 378
+ F+ +GL LL G+ GFE P+ IQQ+SI ++K D I AQ+GTGKTA F +
Sbjct: 12 LKNFEVLGLSQPLLNGLADMGFENPTEIQQQSIPILLKHDGDFIGLAQTGTGKTAAFGLP 71
Query: 379 ILQTLDTTLRETQVLILSPTRELATQIQKVILALGDFM-NVQCHACIGGTNLGEDIRKLD 555
+L +D RE Q LIL+PTRELA QI + + + + GG N+ IR +
Sbjct: 72 LLDLIDVNSREVQALILAPTRELAQQICGQMEQMSKHLGKLNVVPVFGGANIMNQIRDIR 131
Query: 556 YGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVL 651
G ++ TPGR+ D+++RR ++ ++K +VL
Sbjct: 132 RGAQIIVATPGRLMDLMKRREVKLDALKYMVL 163
>UniRef50_A4M6V6 Cluster: DEAD/DEAH box helicase domain protein;
n=2; cellular organisms|Rep: DEAD/DEAH box helicase
domain protein - Petrotoga mobilis SJ95
Length = 530
Score = 110 bits (264), Expect = 3e-23
Identities = 60/148 (40%), Positives = 85/148 (57%), Gaps = 1/148 (0%)
Frame = +1
Query: 211 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRD-VIAQAQSGTGKTATFSISILQ 387
F MGL D +L I G+E P+ IQ++ I ++ G++ VI QAQ+GTGKTA F I +++
Sbjct: 4 FQQMGLSDNILSAIDRKGYEAPTPIQEKVIPLLLSGKNNVIGQAQTGTGKTAAFGIPLIE 63
Query: 388 TLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQH 567
LD + Q L+L+PTRELA Q+ I +L + GG ++G IR L
Sbjct: 64 RLDEKANDVQALVLTPTRELALQVCNEIDSLKGNKRLNLLPVYGGVSIGNQIRALKRRVD 123
Query: 568 VVSGTPGRVFDMIRRRVLRTRSIKMLVL 651
+V GTPGR+ D + R L IK LV+
Sbjct: 124 LVVGTPGRIIDHLNRGTLDITKIKYLVI 151
>UniRef50_Q893G8 Cluster: ATP-dependent RNA helicase; n=4;
Clostridiales|Rep: ATP-dependent RNA helicase -
Clostridium tetani
Length = 386
Score = 109 bits (263), Expect = 4e-23
Identities = 56/153 (36%), Positives = 92/153 (60%), Gaps = 2/153 (1%)
Frame = +1
Query: 199 VIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSIS 378
+I +FD +GL L+ G+ G KP+ IQ ++I ++ +DVI Q+ +G+GKT + +
Sbjct: 1 MIESFDKLGLNQNLIEGLKQEGINKPTDIQIKTIPLALENKDVIGQSPTGSGKTLAYLLP 60
Query: 379 ILQTLDTTLRETQVLILSPTRELATQIQKVI--LALGDFMNVQCHACIGGTNLGEDIRKL 552
I Q +DT+ RE Q +IL+PT ELA QI K I L+ ++V IG N+ I KL
Sbjct: 61 IFQKIDTSKREMQAIILAPTHELAMQINKEIQLLSGNSKVSVTSTPIIGNANVKRQIEKL 120
Query: 553 DYGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVL 651
HV+ G+ GR+ ++I+++ + +IK +V+
Sbjct: 121 KEKPHVIVGSSGRILELIKKKKISAHTIKTIVV 153
>UniRef50_Q8SSD2 Cluster: ATP-DEPENDENT RNA HELICASE INVOLVED IN
mRNA EXPORT FROM THE NUCLEUS; n=1; Encephalitozoon
cuniculi|Rep: ATP-DEPENDENT RNA HELICASE INVOLVED IN
mRNA EXPORT FROM THE NUCLEUS - Encephalitozoon cuniculi
Length = 425
Score = 109 bits (262), Expect = 6e-23
Identities = 61/168 (36%), Positives = 98/168 (58%)
Frame = +1
Query: 148 LSEDLSNVEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDV 327
L +S V D + + V F MGL DELL+ IY GFEKPS IQ+ +I I++G +V
Sbjct: 32 LDGSISGVGTDRGQKLLVAEHFSDMGLSDELLKAIYNQGFEKPSLIQKSAIPHILRGHNV 91
Query: 328 IAQAQSGTGKTATFSISILQTLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCH 507
+ Q++SGTGKT ++ +L R TQV++++PTREL+TQ+ +VI L + ++
Sbjct: 92 VVQSKSGTGKTIAYTCGVLGNTKIGER-TQVMVVTPTRELSTQVTEVISGLAGPLGIKVF 150
Query: 508 ACIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVL 651
+ + + + I G+ VV G+PG + ++ L + +KM+VL
Sbjct: 151 SAL-KNKITDSI-----GEEVVVGSPGTILKLMELGKLNYKGVKMIVL 192
>UniRef50_Q5NZY2 Cluster: ATP-dependent RNA helicase DeaD; n=18;
Bacteria|Rep: ATP-dependent RNA helicase DeaD - Azoarcus
sp. (strain EbN1) (Aromatoleum aromaticum (strain EbN1))
Length = 658
Score = 109 bits (261), Expect = 7e-23
Identities = 59/151 (39%), Positives = 86/151 (56%), Gaps = 1/151 (0%)
Frame = +1
Query: 202 IPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISI 381
I +F + LR LL + G+E PS IQ I ++ G D++ +AQ+GTGKTA F++ +
Sbjct: 43 IESFAQLDLRAPLLDALSEIGYETPSPIQAICIPHLLAGHDLLGEAQTGTGKTAAFALPL 102
Query: 382 LQTLDTTLRETQVLILSPTRELATQIQKVILALG-DFMNVQCHACIGGTNLGEDIRKLDY 558
L LD ++ QVL+L+PTRELA Q+ + + GG ++ +R+L
Sbjct: 103 LDRLDLAVKNPQVLVLAPTRELAIQVAEAFQRYAKNLPGFHVLPVYGGQSMVVQLRQLAR 162
Query: 559 GQHVVSGTPGRVFDMIRRRVLRTRSIKMLVL 651
G HV+ GTPGRV D I R+ L S+ LVL
Sbjct: 163 GAHVIVGTPGRVMDHIERKSLNLDSLTTLVL 193
>UniRef50_A4J5M3 Cluster: DEAD/DEAH box helicase domain protein;
n=2; Clostridiales|Rep: DEAD/DEAH box helicase domain
protein - Desulfotomaculum reducens MI-1
Length = 438
Score = 109 bits (261), Expect = 7e-23
Identities = 53/153 (34%), Positives = 92/153 (60%), Gaps = 2/153 (1%)
Frame = +1
Query: 199 VIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSIS 378
++ +FD + + ++ G+ G + P+AIQ+ +I +K +D+I Q+Q+G+GKT + +
Sbjct: 1 MVTSFDKLEIDADIAEGLSKQGIKNPTAIQKVAIPLALKNKDIIGQSQTGSGKTLAYLLP 60
Query: 379 ILQTLDTTLRETQVLILSPTRELATQIQKVILALGD--FMNVQCHACIGGTNLGEDIRKL 552
I Q +D++ RETQ LIL+PT EL QI K I L + + IG N+ I KL
Sbjct: 61 IFQKIDSSKRETQALILAPTHELVMQIDKQIKTLSSNAGLTINSTVMIGEVNIVRQIEKL 120
Query: 553 DYGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVL 651
H++ G+ GRV ++I+R+ + + +IK +V+
Sbjct: 121 KEKPHIIVGSTGRVLELIKRKKISSHTIKTIVI 153
>UniRef50_P96614 Cluster: DEAD-box ATP-dependent RNA helicase ydbR;
n=90; Bacilli|Rep: DEAD-box ATP-dependent RNA helicase
ydbR - Bacillus subtilis
Length = 494
Score = 109 bits (261), Expect = 7e-23
Identities = 51/148 (34%), Positives = 86/148 (58%)
Frame = +1
Query: 208 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 387
TF L +L++ I GFE+ + IQ ++I + +DVI QAQ+GTGKTA F I +++
Sbjct: 4 TFQDFNLSSDLMKAINRMGFEEATPIQAQTIPLGLSNKDVIGQAQTGTGKTAAFGIPLVE 63
Query: 388 TLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQH 567
++ Q ++++PTRELA Q+ + + +G + GG ++G IR L +
Sbjct: 64 KINPESPNIQAIVIAPTRELAIQVSEELYKIGQDKRAKVLPIYGGQDIGRQIRALKKNPN 123
Query: 568 VVSGTPGRVFDMIRRRVLRTRSIKMLVL 651
++ GTPGR+ D I RR +R ++ +V+
Sbjct: 124 IIVGTPGRLLDHINRRTIRLNNVNTVVM 151
>UniRef50_P0C218 Cluster: Probable ATP-dependent RNA helicase DDX20;
n=9; Euteleostomi|Rep: Probable ATP-dependent RNA
helicase DDX20 - Danio rerio (Zebrafish) (Brachydanio
rerio)
Length = 761
Score = 109 bits (261), Expect = 7e-23
Identities = 61/149 (40%), Positives = 91/149 (61%), Gaps = 2/149 (1%)
Frame = +1
Query: 211 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVK-GRDVIAQAQSGTGKTATFSISILQ 387
F S+ L +L G+ GF++PS IQ ++I P+ + G D+I QA+SGTGKT F+ L
Sbjct: 28 FSSLLLSKPVLEGLSASGFQRPSPIQLKAI-PLGRCGLDLIVQAKSGTGKTCVFTTIALD 86
Query: 388 TLDTTLRETQVLILSPTRELATQIQKVILALGDFM-NVQCHACIGGTNLGEDIRKLDYGQ 564
+L TQVL+L+PTRE+A QI V++A+G M ++CH IGG + +D + L
Sbjct: 87 SLILENATTQVLVLAPTREIAVQIHAVVMAIGSAMEGLECHVFIGGRPISQDKQHLK-KC 145
Query: 565 HVVSGTPGRVFDMIRRRVLRTRSIKMLVL 651
H+ G+PGR+ +I L SI++ VL
Sbjct: 146 HIAIGSPGRIKQLIEMGALMVSSIRLFVL 174
>UniRef50_Q5KBP5 Cluster: ATP-dependent RNA helicase DBP5; n=3;
Filobasidiella neoformans|Rep: ATP-dependent RNA
helicase DBP5 - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 546
Score = 109 bits (261), Expect = 7e-23
Identities = 60/168 (35%), Positives = 104/168 (61%), Gaps = 4/168 (2%)
Frame = +1
Query: 160 LSNVEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKG--RDVIA 333
L++++ D + + + +F + L ++L++GI GF+KPS IQ++++ ++ R++I
Sbjct: 133 LADLQGDPNSPLYSVQSFKELNLHEDLMKGIIAAGFQKPSKIQEKALPLLLSNPPRNLIG 192
Query: 334 QAQSGTGKTATFSISILQTLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHAC 513
Q+QSGTGKTA F++++L +D T+ Q + ++P+RELA QIQ+VI +G F V
Sbjct: 193 QSQSGTGKTAAFTLNMLSRVDPTIPTPQAICIAPSRELARQIQEVIDQIGQFTQVGTFLA 252
Query: 514 IGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIRR--RVLRTRSIKMLVL 651
I G+ R + ++ GTPG + DM+ R R+L R I++LVL
Sbjct: 253 IPGS----WSRNSRIDKQILIGTPGTLVDMLMRGSRILDPRMIRVLVL 296
>UniRef50_Q98RE0 Cluster: ATP-DEPENDENT RNA HELICASE; n=1;
Mycoplasma pulmonis|Rep: ATP-DEPENDENT RNA HELICASE -
Mycoplasma pulmonis
Length = 480
Score = 108 bits (260), Expect = 1e-22
Identities = 56/148 (37%), Positives = 89/148 (60%), Gaps = 1/148 (0%)
Frame = +1
Query: 211 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIV-KGRDVIAQAQSGTGKTATFSISILQ 387
F M ++ E+L+ + GFEKP+ IQ+ ++LP +G+D+I QAQ+GTGKTA F+I IL
Sbjct: 3 FTQMNIKSEILKSLDEIGFEKPTKIQE-AVLPFAFEGKDIIGQAQTGTGKTAAFAIPILS 61
Query: 388 TLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQH 567
LD ++ Q L+++PTRELA QI + LG + + +GG + + L+ G +
Sbjct: 62 NLDCSINRIQHLVIAPTRELANQIYDQLNILGKYTCSKIALILGGVSYEKQKAALNSGVN 121
Query: 568 VVSGTPGRVFDMIRRRVLRTRSIKMLVL 651
+V TPGR+ D++ + + IK L
Sbjct: 122 IVVATPGRLEDLLAQNKIDLSHIKTFTL 149
>UniRef50_Q0TQ86 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=3; Clostridium perfringens|Rep: ATP-dependent
RNA helicase, DEAD/DEAH box family - Clostridium
perfringens (strain ATCC 13124 / NCTC 8237 / Type A)
Length = 405
Score = 108 bits (260), Expect = 1e-22
Identities = 52/149 (34%), Positives = 91/149 (61%), Gaps = 2/149 (1%)
Frame = +1
Query: 211 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 390
F +GL +E+L+ + G E+P+ IQ+++I I+KG++VI +A++GTGKT + + I++
Sbjct: 4 FLKLGLSEEVLKSLVGLGIEEPTDIQEKAIPEILKGKNVIGKAETGTGKTLAYLLPIIEK 63
Query: 391 LDTTLRETQVLILSPTRELATQIQKVI--LALGDFMNVQCHACIGGTNLGEDIRKLDYGQ 564
+D + E Q +ILSPT EL QI V+ L G + +G N+ + KL
Sbjct: 64 IDDSKNEMQAIILSPTHELGVQINNVLNDLKRGLGKKITSTTLVGSGNIKRQMEKLKNKP 123
Query: 565 HVVSGTPGRVFDMIRRRVLRTRSIKMLVL 651
H++ GT GR+ ++I ++ + T +IK +V+
Sbjct: 124 HILVGTTGRILELINKKKITTNTIKTIVI 152
>UniRef50_P44586 Cluster: Cold-shock DEAD box protein A homolog;
n=20; Pasteurellaceae|Rep: Cold-shock DEAD box protein A
homolog - Haemophilus influenzae
Length = 613
Score = 108 bits (260), Expect = 1e-22
Identities = 56/149 (37%), Positives = 85/149 (57%), Gaps = 1/149 (0%)
Frame = +1
Query: 208 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 387
TF+ +GL + +L+ + GFE PS IQQ I ++ G DV+ AQ+G+GKTA F++ +L
Sbjct: 6 TFNDLGLPEFILKAVSDLGFETPSPIQQSCIPHLLNGNDVLGMAQTGSGKTAAFALPLLA 65
Query: 388 TLDTTLRETQVLILSPTRELATQIQKVI-LALGDFMNVQCHACIGGTNLGEDIRKLDYGQ 564
+D + + Q+L+++PTRELA Q+ L + + GG +R L G
Sbjct: 66 QIDPSEKHPQMLVMAPTRELAIQVADACELFVKYAQGTRIVTLYGGQRYDIQLRALKQGA 125
Query: 565 HVVSGTPGRVFDMIRRRVLRTRSIKMLVL 651
VV GTPGR+ D IRR L ++ +VL
Sbjct: 126 QVVVGTPGRILDHIRRGTLNLSELRFIVL 154
>UniRef50_Q9PGP6 Cluster: ATP-dependent RNA helicase; n=10; cellular
organisms|Rep: ATP-dependent RNA helicase - Xylella
fastidiosa
Length = 614
Score = 108 bits (259), Expect = 1e-22
Identities = 57/148 (38%), Positives = 83/148 (56%), Gaps = 1/148 (0%)
Frame = +1
Query: 211 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 390
F +GL D +++ + G+E PS IQ +I ++ GRDV+ QAQ+GTGKTA F++ +L
Sbjct: 17 FADLGLSDAVMQAVTKIGYETPSPIQAATIPALLAGRDVLGQAQTGTGKTAAFALPLLTR 76
Query: 391 LDTTLRETQVLILSPTRELATQIQKVILA-LGDFMNVQCHACIGGTNLGEDIRKLDYGQH 567
+ QVL+L+PTRELA Q+ + + GG + G+ + L G H
Sbjct: 77 TVLNQVKPQVLVLAPTRELAIQVAEAFQRYAASISGFRVLPVYGGQSYGQQLAALKRGVH 136
Query: 568 VVSGTPGRVFDMIRRRVLRTRSIKMLVL 651
V+ GTPGRV D + R L +K LVL
Sbjct: 137 VIVGTPGRVIDHLERGTLDLSELKTLVL 164
>UniRef50_Q5ZT20 Cluster: ATP-dependent RNA helicase; n=4;
Legionella pneumophila|Rep: ATP-dependent RNA helicase -
Legionella pneumophila subsp. pneumophila (strain
Philadelphia 1 /ATCC 33152 / DSM 7513)
Length = 589
Score = 108 bits (259), Expect = 1e-22
Identities = 60/151 (39%), Positives = 84/151 (55%), Gaps = 1/151 (0%)
Frame = +1
Query: 202 IPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISI 381
I F + + L + + F PS IQ ++I I++GRD IA AQ+GTGKTA F++ I
Sbjct: 5 ISNFSTFNFSNALNKALEDMKFITPSPIQAQTIPLILQGRDAIALAQTGTGKTAAFALPI 64
Query: 382 LQTLDTTLRETQVLILSPTRELATQIQKVILALGDFM-NVQCHACIGGTNLGEDIRKLDY 558
LQ L + TQ LIL+PTRELA Q+ + L + NV GG G +++L
Sbjct: 65 LQNLSPEISTTQALILAPTRELAIQVAEQFELLSKYQRNVTIAVLCGGQEYGRQLKQLRS 124
Query: 559 GQHVVSGTPGRVFDMIRRRVLRTRSIKMLVL 651
G VV GTPGR+ D I + L ++K +L
Sbjct: 125 GAQVVVGTPGRILDHIDKGTLLLNNLKTFIL 155
>UniRef50_Q185X0 Cluster: ATP-dependent RNA helicase; n=3;
Clostridium difficile|Rep: ATP-dependent RNA helicase -
Clostridium difficile (strain 630)
Length = 497
Score = 108 bits (259), Expect = 1e-22
Identities = 48/148 (32%), Positives = 91/148 (61%)
Frame = +1
Query: 208 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 387
TF+ L +++L+ + + G+ PS +Q+ I ++KG++++ ++++G+GKTA+F+I + +
Sbjct: 4 TFEKFKLNEKILKSLKSLGYNIPSRVQREVIPKLLKGQNLVVRSKTGSGKTASFAIPLCE 63
Query: 388 TLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQH 567
++ Q LI+ PTRELA Q++ I +G V+C A G ++ + I +L H
Sbjct: 64 NINVDYNNIQALIVVPTRELALQVKDEISDIGRLKKVRCSAIFGKQSIKDQIAELKQRVH 123
Query: 568 VVSGTPGRVFDMIRRRVLRTRSIKMLVL 651
+V TPGR+ D I R ++ ++K LV+
Sbjct: 124 IVVATPGRILDHINRGSIKLENVKYLVI 151
>UniRef50_A6TUK6 Cluster: DEAD/DEAH box helicase domain protein;
n=2; Firmicutes|Rep: DEAD/DEAH box helicase domain
protein - Alkaliphilus metalliredigens QYMF
Length = 484
Score = 108 bits (259), Expect = 1e-22
Identities = 56/147 (38%), Positives = 85/147 (57%)
Frame = +1
Query: 211 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 390
F L DELL+ I FE P+ +QQ+ I I++ +D+I ++Q+G+GKTA F+I I Q
Sbjct: 6 FSDYQLSDELLKSISMLNFESPTKVQQQVIPAILEHKDIIVKSQTGSGKTAAFAIPICQL 65
Query: 391 LDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQHV 570
+D + Q L+L PTRELA Q+++ + +G F ++ A G ++L HV
Sbjct: 66 VDWDENKPQALVLVPTRELAIQVKEDMFNIGRFKRLKVAAVYGKAPFYHQEKELKQKTHV 125
Query: 571 VSGTPGRVFDMIRRRVLRTRSIKMLVL 651
V GTPGR+ D + + T IK LV+
Sbjct: 126 VVGTPGRIIDHMEKGTFDTSQIKYLVI 152
>UniRef50_A5CVQ6 Cluster: ATP-dependent RNA helicase DeaD; n=2;
sulfur-oxidizing symbionts|Rep: ATP-dependent RNA
helicase DeaD - Vesicomyosocius okutanii subsp.
Calyptogena okutanii (strain HA)
Length = 608
Score = 108 bits (259), Expect = 1e-22
Identities = 54/148 (36%), Positives = 86/148 (58%), Gaps = 1/148 (0%)
Frame = +1
Query: 211 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 390
F+ +GL + +L + + G+E PS IQ++ I ++ +D+I QAQ+GTGKTA F + +L
Sbjct: 14 FERLGLSNTILNVLDSIGYETPSPIQEQCITHLLNNKDIIGQAQTGTGKTAAFVLPLLDK 73
Query: 391 LDTTLRETQVLILSPTRELATQIQKVILALGDFM-NVQCHACIGGTNLGEDIRKLDYGQH 567
++ + Q+LIL+PTRELA Q+ + + M GG + +R L G H
Sbjct: 74 INLNINAPQLLILAPTRELAIQVSEAVQTYARGMKGFHVLPIYGGQSYDIQLRPLKRGVH 133
Query: 568 VVSGTPGRVFDMIRRRVLRTRSIKMLVL 651
+ GTPGRV D I ++ L+ ++K VL
Sbjct: 134 AIVGTPGRVMDHIEKKTLKLDNLKSFVL 161
>UniRef50_Q4IZ16 Cluster: DEAD/DEAH box helicase:Helicase,
C-terminal:DbpA RNA binding domain; n=18;
Pseudomonadaceae|Rep: DEAD/DEAH box helicase:Helicase,
C-terminal:DbpA RNA binding domain - Azotobacter
vinelandii AvOP
Length = 575
Score = 107 bits (258), Expect = 2e-22
Identities = 58/148 (39%), Positives = 86/148 (58%), Gaps = 1/148 (0%)
Frame = +1
Query: 211 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 390
F ++G+ +L I G+E+PS IQ ++I I+ G D+I QAQ+GTGKTA F++ +L
Sbjct: 25 FAALGIHPAVLAAITAVGYEEPSPIQAQAIPVILAGHDMIGQAQTGTGKTAAFALPMLSR 84
Query: 391 LDTTLRETQVLILSPTRELATQIQKVILALGDFM-NVQCHACIGGTNLGEDIRKLDYGQH 567
+D RE Q+LIL+PTRELA Q+ + V A GG +G ++ L G
Sbjct: 85 IDPARREPQLLILAPTRELALQVATAFETYASQLPGVGVVAVYGGAPMGPQLKALRQGAQ 144
Query: 568 VVSGTPGRVFDMIRRRVLRTRSIKMLVL 651
++ TPGR+ D +RR ++K LVL
Sbjct: 145 ILVATPGRLCDHLRRDEQLLSTVKHLVL 172
>UniRef50_Q11U28 Cluster: ATP-dependent RNA helicase protein; n=4;
Bacteria|Rep: ATP-dependent RNA helicase protein -
Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469)
Length = 413
Score = 107 bits (258), Expect = 2e-22
Identities = 57/151 (37%), Positives = 88/151 (58%), Gaps = 4/151 (2%)
Frame = +1
Query: 211 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 390
F+S L + + + GF +P+ IQ +SI PI+ G DV+A AQ+GTGKTA F I +L T
Sbjct: 3 FESYDLAPGIKKSLAEAGFNRPTDIQFKSIPPILAGEDVLAIAQTGTGKTAAFVIPVLNT 62
Query: 391 LDTTLR----ETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDY 558
L + + L+++PTRELA QI +V +G + ++ GG I DY
Sbjct: 63 LINVKKSEHTDISCLVMAPTRELAVQISEVFKKIGAYTRLRTVCITGGVEQEAQIAAADY 122
Query: 559 GQHVVSGTPGRVFDMIRRRVLRTRSIKMLVL 651
G ++ TPGR+FD+I ++ ++ +K+LVL
Sbjct: 123 GIDILVATPGRMFDLIYQKHIKITRVKILVL 153
>UniRef50_Q0AVQ9 Cluster: ATP-dependent RNA helicase; n=1;
Syntrophomonas wolfei subsp. wolfei str. Goettingen|Rep:
ATP-dependent RNA helicase - Syntrophomonas wolfei
subsp. wolfei (strain Goettingen)
Length = 530
Score = 107 bits (258), Expect = 2e-22
Identities = 61/147 (41%), Positives = 87/147 (59%)
Frame = +1
Query: 211 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 390
F SMGL+ +LL+ I GFEKP+ IQ +SI + G D++ QAQ+GTGKTA+F I IL
Sbjct: 6 FYSMGLKTDLLQMIDEKGFEKPTPIQVKSIPIAMAGLDLMGQAQTGTGKTASFGIPILNR 65
Query: 391 LDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQHV 570
+ Q L+L PTRELA Q+ + I +L M +Q A GG ++ +R L +
Sbjct: 66 V-IKGEGLQALVLCPTRELAVQVTEEISSLSRRMRIQVLAIYGGQSIELQLRSLRRNPEI 124
Query: 571 VSGTPGRVFDMIRRRVLRTRSIKMLVL 651
+ GTPGR+ D + R + +K +VL
Sbjct: 125 IVGTPGRLMDHMNRGTISLSPLKYVVL 151
>UniRef50_A0V009 Cluster: DEAD/DEAH box helicase-like; n=1;
Clostridium cellulolyticum H10|Rep: DEAD/DEAH box
helicase-like - Clostridium cellulolyticum H10
Length = 542
Score = 107 bits (258), Expect = 2e-22
Identities = 55/148 (37%), Positives = 88/148 (59%)
Frame = +1
Query: 208 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 387
TF+ +G+ +L+ I GF+ P+ +Q ++I I+ D+I +++G+GKTA F +SILQ
Sbjct: 4 TFNELGISAPILKAIDDMGFKTPTEVQSKAIPHILNNEDLIVMSKTGSGKTAVFGVSILQ 63
Query: 388 TLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQH 567
+ Q LIL+P RELA Q+ I + ++ + A G N+ + + L+ G
Sbjct: 64 LTNPEEAGPQGLILTPARELAVQVDNDIRKMAKYLKHKTTAIYGQHNINLETQILNKGVS 123
Query: 568 VVSGTPGRVFDMIRRRVLRTRSIKMLVL 651
+V+GTPGRVFD I L T++I+ LVL
Sbjct: 124 IVTGTPGRVFDHISHGTLSTKNIRFLVL 151
>UniRef50_A6TTG0 Cluster: DEAD/DEAH box helicase domain protein;
n=3; Clostridiaceae|Rep: DEAD/DEAH box helicase domain
protein - Alkaliphilus metalliredigens QYMF
Length = 549
Score = 107 bits (257), Expect = 2e-22
Identities = 53/147 (36%), Positives = 86/147 (58%)
Frame = +1
Query: 211 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 390
F +G+ +E+ + +P+ +Q ++I P++ RDV+AQAQ+GTGKT F + IL+
Sbjct: 5 FAKLGISEEIENVLNKSDITEPTPVQLQAIPPLLAQRDVMAQAQTGTGKTLAFILPILER 64
Query: 391 LDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQHV 570
++ Q LI++PTRELA QI L + + A GG ++ + +RKL H+
Sbjct: 65 VNVEKPTIQALIITPTRELAIQITAETKKLAEVKGINILAAYGGQDVEQQLRKLKGSIHI 124
Query: 571 VSGTPGRVFDMIRRRVLRTRSIKMLVL 651
+ GTPGR+ D +RR+ + + MLVL
Sbjct: 125 IIGTPGRLLDHLRRKTINLGKLSMLVL 151
>UniRef50_A6T3R2 Cluster: ATP-dependent RNA helicase; n=52; cellular
organisms|Rep: ATP-dependent RNA helicase -
Janthinobacterium sp. (strain Marseille) (Minibacterium
massiliensis)
Length = 778
Score = 107 bits (257), Expect = 2e-22
Identities = 59/150 (39%), Positives = 83/150 (55%), Gaps = 1/150 (0%)
Frame = +1
Query: 205 PTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISIL 384
P F + L + LLR + G+E PS IQ +I ++ RDV+ QAQ+GTGKTA+F++ IL
Sbjct: 7 PLFADLKLSEPLLRVLQELGYESPSPIQAATIPLLLNNRDVLGQAQTGTGKTASFALPIL 66
Query: 385 QTLDTTLRETQVLILSPTRELATQIQKVILALGDFM-NVQCHACIGGTNLGEDIRKLDYG 561
+D Q L+L+PTRELA Q+ + ++ GG + G + L G
Sbjct: 67 ARIDIKQTTPQALVLAPTRELAIQVAEAFQRYATYIPGFHVLPIYGGQSYGAQLSALRRG 126
Query: 562 QHVVSGTPGRVFDMIRRRVLRTRSIKMLVL 651
HVV GTPGRV D + + L IK +VL
Sbjct: 127 VHVVVGTPGRVIDHLEKGSLDLSRIKTMVL 156
>UniRef50_A5E6W6 Cluster: ATP-dependent rRNA helicase RRP3; n=4;
Saccharomycetaceae|Rep: ATP-dependent rRNA helicase RRP3
- Lodderomyces elongisporus (Yeast) (Saccharomyces
elongisporus)
Length = 504
Score = 107 bits (257), Expect = 2e-22
Identities = 59/166 (35%), Positives = 94/166 (56%)
Frame = +1
Query: 103 IRKMTSSEVSSNRKILSEDLSNVEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSA 282
+ ++++ E S +K S S+ +S + +F L ELL I + + +P+
Sbjct: 64 VSELSNKEDLSTKKDQSSASSSSSTSSSSSPPSVQSFTEFDLVPELLESIQSLKYTQPTP 123
Query: 283 IQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQTLDTTLRETQVLILSPTRELATQIQ 462
IQ +I ++G+D++ A++G+GKTA F+I ILQTL T + L+L+PTRELA QI+
Sbjct: 124 IQAAAIPHALQGKDIVGIAETGSGKTAAFAIPILQTLYTAAQPYYALVLAPTRELAFQIK 183
Query: 463 KVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVFD 600
+ ALG M ++ IGG ++ E R L HV+ TPGR+ D
Sbjct: 184 ETFDALGSSMGLRSVCIIGGMSMMEQARDLMRKPHVIIATPGRLID 229
>UniRef50_Q0HYG8 Cluster: DEAD/DEAH box helicase domain protein;
n=62; Proteobacteria|Rep: DEAD/DEAH box helicase domain
protein - Shewanella sp. (strain MR-7)
Length = 549
Score = 106 bits (255), Expect = 4e-22
Identities = 51/152 (33%), Positives = 95/152 (62%), Gaps = 4/152 (2%)
Frame = +1
Query: 208 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 387
+F S+GL + + + G++ PS IQ ++I ++ G+DV+A AQ+GTGKTA F++ +L+
Sbjct: 2 SFSSLGLSLPIQKAVTEQGYDTPSPIQAQAIPAVLTGKDVMAAAQTGTGKTAGFTLPLLE 61
Query: 388 TLDTTLR----ETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLD 555
L + + + L+L+PTRELA Q+ + + G ++ ++ GG + I+KL
Sbjct: 62 LLSKGNKAKAGQIRALVLTPTRELAAQVSESVETYGKYLPLRSAVVFGGVPINPQIQKLR 121
Query: 556 YGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVL 651
+G V+ TPGR+ D++++ V++ +++LVL
Sbjct: 122 HGVDVLVATPGRLLDLVQQNVVKFNQLEILVL 153
>UniRef50_A5BNE7 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 339
Score = 106 bits (255), Expect = 4e-22
Identities = 53/89 (59%), Positives = 65/89 (73%)
Frame = +1
Query: 241 LRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQTLDTTLRETQV 420
L + G EKPSAIQQ+ I+P KG DVI QAQSGTGKTATF ILQ L+ L + Q
Sbjct: 24 LLNVLCEGIEKPSAIQQKGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLNEELTQCQA 83
Query: 421 LILSPTRELATQIQKVILALGDFMNVQCH 507
L+L+PTRELA QI+KV+ ALGD +NV+ +
Sbjct: 84 LVLAPTRELAQQIEKVMRALGDHLNVKIY 112
>UniRef50_P38712 Cluster: ATP-dependent rRNA helicase RRP3; n=6;
Ascomycota|Rep: ATP-dependent rRNA helicase RRP3 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 501
Score = 106 bits (255), Expect = 4e-22
Identities = 58/159 (36%), Positives = 89/159 (55%), Gaps = 1/159 (0%)
Frame = +1
Query: 178 DTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGK 357
+T+ED E +F + L EL++ + KP+ IQ ++I P ++G D+I AQ+G+GK
Sbjct: 73 NTNED-ESFESFSELNLVPELIQACKNLNYSKPTPIQSKAIPPALEGHDIIGLAQTGSGK 131
Query: 358 TATFSISILQTLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGE 537
TA F+I IL L IL+PTRELA QI++ +LG M V+ +GG N+ +
Sbjct: 132 TAAFAIPILNRLWHDQEPYYACILAPTRELAQQIKETFDSLGSLMGVRSTCIVGGMNMMD 191
Query: 538 DIRKLDYGQHVVSGTPGRVFDMIRR-RVLRTRSIKMLVL 651
R L H++ TPGR+ D + + R +K LV+
Sbjct: 192 QARDLMRKPHIIIATPGRLMDHLENTKGFSLRKLKFLVM 230
>UniRef50_Q5QY63 Cluster: ATP-dependent RNA helicase; n=3;
Alteromonadales|Rep: ATP-dependent RNA helicase -
Idiomarina loihiensis
Length = 594
Score = 106 bits (254), Expect = 5e-22
Identities = 53/149 (35%), Positives = 89/149 (59%), Gaps = 1/149 (0%)
Frame = +1
Query: 208 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 387
+F+ M L +L + F P+ IQ ++I +++G+DV+ +AQ+GTGKTA F + L
Sbjct: 9 SFNDMALPSAVLEQLNAMQFLTPTPIQLQAIPALLEGQDVLGEAQTGTGKTAAFGLPALA 68
Query: 388 TLDTTLRETQVLILSPTRELATQIQKVILALGDFM-NVQCHACIGGTNLGEDIRKLDYGQ 564
+D ++++TQVL+++PTRELA Q+ + + M V GG G ++ L G
Sbjct: 69 KIDASVKQTQVLVVTPTRELAIQVAEALEGFAAKMRGVGVATVYGGAPFGPQVKALKQGT 128
Query: 565 HVVSGTPGRVFDMIRRRVLRTRSIKMLVL 651
+V GTPGR+ D++ + VL+ +K+ VL
Sbjct: 129 AIVVGTPGRLIDLLNKNVLQLDGLKVGVL 157
>UniRef50_A3I1F5 Cluster: DEAD/DEAH box helicase-like protein; n=1;
Algoriphagus sp. PR1|Rep: DEAD/DEAH box helicase-like
protein - Algoriphagus sp. PR1
Length = 399
Score = 105 bits (253), Expect = 7e-22
Identities = 53/148 (35%), Positives = 88/148 (59%)
Frame = +1
Query: 208 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 387
+F S+ L ++R + G+E + IQ++SI +++GRD++ + +G+GKT F I I++
Sbjct: 56 SFASLSLDSVMMRNLSEKGYENMTNIQEQSIEALLEGRDLLGISNTGSGKTGAFLIPIIE 115
Query: 388 TLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQH 567
+ LI++PTRELA QI + +L M + IGGTN+ D++ L H
Sbjct: 116 HALKNPGQFTALIVTPTRELALQIDQEFKSLSKGMRLHSATFIGGTNINTDMKVLSRKLH 175
Query: 568 VVSGTPGRVFDMIRRRVLRTRSIKMLVL 651
V+ GTPGR+ D+ R++L+ +K LVL
Sbjct: 176 VIVGTPGRLLDLTNRKLLKLNQVKTLVL 203
>UniRef50_Q7A4G0 Cluster: Probable DEAD-box ATP-dependent RNA
helicase SA1885; n=13; Staphylococcus|Rep: Probable
DEAD-box ATP-dependent RNA helicase SA1885 -
Staphylococcus aureus (strain N315)
Length = 506
Score = 105 bits (253), Expect = 7e-22
Identities = 55/147 (37%), Positives = 85/147 (57%)
Frame = +1
Query: 211 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 390
F +G+ D ++ + + GF++P+ IQ+ SI ++G D++ QAQ+GTGKT F I +++
Sbjct: 4 FKELGISDNTVQSLESMGFKEPTPIQKDSIPYALQGIDILGQAQTGTGKTGAFGIPLIEK 63
Query: 391 LDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQHV 570
+ + Q LIL+PTRELA Q+ + + VQ GG + I+ L G +
Sbjct: 64 V-VGKQGVQSLILAPTRELAMQVAEQLREFSRGQGVQVVTVFGGMPIERQIKALKKGPQI 122
Query: 571 VSGTPGRVFDMIRRRVLRTRSIKMLVL 651
V GTPGRV D + RR L+T I L+L
Sbjct: 123 VVGTPGRVIDHLNRRTLKTDGIHTLIL 149
>UniRef50_Q08Q14 Cluster: HeliCase, c-terminal:dead/deah box
helicase, n-terminal; n=3; Bacteria|Rep: HeliCase,
c-terminal:dead/deah box helicase, n-terminal -
Stigmatella aurantiaca DW4/3-1
Length = 608
Score = 105 bits (252), Expect = 9e-22
Identities = 52/151 (34%), Positives = 88/151 (58%), Gaps = 3/151 (1%)
Frame = +1
Query: 208 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 387
TF+S+GL L+ + G+E+P+ IQ+ ++ P+++G+D++ A +GTGKTA FS+ +LQ
Sbjct: 37 TFESLGLLPPLVEALSALGYEEPTPIQRAALPPLLEGKDLLGIAATGTGKTAAFSLPLLQ 96
Query: 388 TLDTTLR---ETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDY 558
+ L+L PTRELA Q+ + I G + + GG + + +R L
Sbjct: 97 RITPGAHAPFTASALVLVPTRELAMQVAEAIHRYGQKLGISVVPLYGGQVISQQLRVLKR 156
Query: 559 GQHVVSGTPGRVFDMIRRRVLRTRSIKMLVL 651
G VV TPGR D ++R+ L+ ++++VL
Sbjct: 157 GVDVVVATPGRALDHLQRKTLKLEQVRVVVL 187
>UniRef50_A6DK15 Cluster: ATP-dependent RNA helicase, specific for
23S rRNA; n=1; Lentisphaera araneosa HTCC2155|Rep:
ATP-dependent RNA helicase, specific for 23S rRNA -
Lentisphaera araneosa HTCC2155
Length = 462
Score = 105 bits (252), Expect = 9e-22
Identities = 55/148 (37%), Positives = 88/148 (59%), Gaps = 1/148 (0%)
Frame = +1
Query: 211 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 390
F S+ L ++L++ + + G+E+ + IQ+ S+ I+ G+D+IAQA++GTGKTA F + +L
Sbjct: 6 FASLPLSEDLIKNVASLGYEEMTEIQELSLPAILDGKDLIAQAKTGTGKTAAFGLGVLSK 65
Query: 391 LDTTLRETQVLILSPTRELATQIQKVILALGDFM-NVQCHACIGGTNLGEDIRKLDYGQH 567
L QVLIL PTREL Q+ K I L M N++ + GG ++ + +G H
Sbjct: 66 LVLDDYRIQVLILCPTRELCEQVSKAIRDLARMMPNIKLLSLGGGMPFRPQMKSVAHGAH 125
Query: 568 VVSGTPGRVFDMIRRRVLRTRSIKMLVL 651
+V GTPGR+ + + L ++ LVL
Sbjct: 126 IVVGTPGRILKHLNKSSLSLDHVRTLVL 153
>UniRef50_O26305 Cluster: ATP-dependent RNA helicase, eIF-4A family;
n=1; Methanothermobacter thermautotrophicus str. Delta
H|Rep: ATP-dependent RNA helicase, eIF-4A family -
Methanobacterium thermoautotrophicum
Length = 425
Score = 105 bits (252), Expect = 9e-22
Identities = 55/147 (37%), Positives = 83/147 (56%)
Frame = +1
Query: 211 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 390
F + ++ R + GFE + IQ ++ + G DV+ +AQ+GTGKTA F+I +L+
Sbjct: 6 FSEFDISGDINRALDDMGFESTTPIQALTLPVTLDGMDVVGEAQTGTGKTAAFAIPVLEN 65
Query: 391 LDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQHV 570
L+ R Q LI+ PTREL Q+ + I +G +M V+ A GG ++G I +L G HV
Sbjct: 66 LEAE-RVPQALIICPTRELCLQVSEEIKRIGKYMKVKVLAVYGGQSIGNQIAQLRRGVHV 124
Query: 571 VSGTPGRVFDMIRRRVLRTRSIKMLVL 651
+ TPGR+ D I R + I +VL
Sbjct: 125 IVATPGRLIDHIERGTVDLGGISTVVL 151
>UniRef50_Q4N9Q9 Cluster: DEAD box RNA helicase, putative; n=3;
Piroplasmida|Rep: DEAD box RNA helicase, putative -
Theileria parva
Length = 501
Score = 105 bits (251), Expect = 1e-21
Identities = 61/183 (33%), Positives = 106/183 (57%), Gaps = 4/183 (2%)
Frame = +1
Query: 115 TSSEVSSNRKILSEDLSNVEF--DTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQ 288
TS++ + ++ +++S+ T + + + + L +LL+GI GF KPS IQ
Sbjct: 67 TSNDFMRPKHVMLDEISDALLVDGTQFNENINMQWSQLPLSPDLLKGIQNMGFAKPSKIQ 126
Query: 289 QRSILPIVKGR--DVIAQAQSGTGKTATFSISILQTLDTTLRETQVLILSPTRELATQIQ 462
Q + LP++ G ++IAQA++G+GKTATF++++L ++ + Q L + PTRELATQ
Sbjct: 127 QCA-LPLILGSCTNIIAQAKNGSGKTATFALAMLSKVNVNVPLVQALCICPTRELATQNV 185
Query: 463 KVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIRRRVLRTRSIKM 642
+VI LG F ++C + ED + H+ GTPG+ D +++R++ ++ M
Sbjct: 186 QVIQKLGQFTQIKCFLGVPQCPRYED----NDQYHLYVGTPGKTMDFLKKRIMNVTNVVM 241
Query: 643 LVL 651
LVL
Sbjct: 242 LVL 244
>UniRef50_Q23U16 Cluster: DEAD/DEAH box helicase family protein;
n=1; Tetrahymena thermophila SB210|Rep: DEAD/DEAH box
helicase family protein - Tetrahymena thermophila SB210
Length = 475
Score = 105 bits (251), Expect = 1e-21
Identities = 51/81 (62%), Positives = 63/81 (77%), Gaps = 1/81 (1%)
Frame = +1
Query: 244 RGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQTLDTTLRETQVL 423
+ + +YGFEKPS IQQ I+PI+KG+D IAQAQSGTGKTATFSI+ LQ +DT+ TQ L
Sbjct: 47 QNVLSYGFEKPSPIQQCGIIPIIKGKDTIAQAQSGTGKTATFSIATLQVIDTSSPHTQAL 106
Query: 424 ILSPTRELATQ-IQKVILALG 483
IL+PTRELA Q I ++ LG
Sbjct: 107 ILAPTRELAQQTITRIFFILG 127
Score = 66.9 bits (156), Expect = 4e-10
Identities = 30/64 (46%), Positives = 45/64 (70%)
Frame = +1
Query: 460 QKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIRRRVLRTRSIK 639
+KVI+ LG+F+ V +AC GGT+ ED ++L G VV GTPGRV D+I+++ L T +K
Sbjct: 186 KKVIMYLGEFLKVSAYACTGGTDPKEDRKRLREGVQVVVGTPGRVLDLIQKKTLVTDHLK 245
Query: 640 MLVL 651
+ +L
Sbjct: 246 LFIL 249
>UniRef50_Q0E2Q3 Cluster: Putative eukaryotic initiation factor
4A-2; n=5; Oryza sativa|Rep: Putative eukaryotic
initiation factor 4A-2 - Oryza sativa subsp. japonica
(Rice)
Length = 416
Score = 105 bits (251), Expect = 1e-21
Identities = 59/152 (38%), Positives = 83/152 (54%)
Frame = +1
Query: 196 EVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSI 375
+++ T + + + L+ T +KPSA+ QR I+P+ G D+I Q+ GT T T
Sbjct: 45 DIVTTQGAQFISESLIGETQTKDLDKPSAVHQRGIVPLCNGLDIIQQSLFGT--TVTLCC 102
Query: 376 SILQTLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLD 555
ILQ LD E Q L+L PT +LA + Q VI LG F++ + HA GGT+ ED + L
Sbjct: 103 GILQRLDYASTECQALVLVPTHDLAHETQNVIGVLGQFLSAKAHAFCGGTSAHEDQQILS 162
Query: 556 YGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVL 651
G V GTP V M++ R L I+M VL
Sbjct: 163 TGVQVAVGTPCHVLGMLQGRALCPDHIRMFVL 194
>UniRef50_UPI0000D55AB0 Cluster: PREDICTED: similar to Probable
ATP-dependent RNA helicase DDX20 (DEAD box protein 20)
(DEAD box protein DP 103) (Component of gems 3)
(Gemin-3) (Regulator of steroidogenic factor 1)
(ROSF-1); n=1; Tribolium castaneum|Rep: PREDICTED:
similar to Probable ATP-dependent RNA helicase DDX20
(DEAD box protein 20) (DEAD box protein DP 103)
(Component of gems 3) (Gemin-3) (Regulator of
steroidogenic factor 1) (ROSF-1) - Tribolium castaneum
Length = 688
Score = 104 bits (250), Expect = 2e-21
Identities = 60/150 (40%), Positives = 96/150 (64%), Gaps = 2/150 (1%)
Frame = +1
Query: 208 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVK-GRDVIAQAQSGTGKTATFSISIL 384
+F S+ L D++ +G+ GF+KPS IQ ++I P+ + G D+I +++SGTGKT FS L
Sbjct: 25 SFASLLLPDDIKQGLSVSGFKKPSPIQFKAI-PLGRCGFDLIVKSKSGTGKTLVFSTIAL 83
Query: 385 QTLDTTLRETQVLILSPTRELATQIQKVILALGDFMN-VQCHACIGGTNLGEDIRKLDYG 561
+T++T QVLIL PTRE+A QI+ V+ ++G +N ++ + IGG L +D++K
Sbjct: 84 ETVNTAKDHLQVLILVPTREIAVQIEDVLRSVGCHVNGLKIESFIGGRPLEDDLKK-SSK 142
Query: 562 QHVVSGTPGRVFDMIRRRVLRTRSIKMLVL 651
H+ G PGRV +++ L T +K+ VL
Sbjct: 143 CHIAVGAPGRVKHLLKMGALTTNLVKLFVL 172
>UniRef50_A0BPV0 Cluster: Chromosome undetermined scaffold_12, whole
genome shotgun sequence; n=4; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_12,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 471
Score = 104 bits (250), Expect = 2e-21
Identities = 58/173 (33%), Positives = 98/173 (56%), Gaps = 8/173 (4%)
Frame = +1
Query: 157 DLSNVEFDTSEDVEV----IPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRD 324
D + T +D+++ + F + GL++ELLR + GFE P+ +Q S+ + G
Sbjct: 53 DFKEEQQPTGKDIQIDNYNVSQFKNFGLKEELLRAVKEAGFEHPTRVQAESLTNALLGEQ 112
Query: 325 VIAQAQSGTGKTATFSISILQTLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQC 504
+I QA++GTGKTA F +++L T++T + + L+++ TRELA Q + L LG FM
Sbjct: 113 LICQAKAGTGKTAVFVLTVLNTINTESNKVECLVITHTRELAQQARDEFLRLGKFMKSVK 172
Query: 505 HACI--GGTNLGEDIRKLD-YGQHVVSGTPGRVFDMI-RRRVLRTRSIKMLVL 651
C GG + +I+ ++ +V GTPGR+ D+I R+ L+ +K +L
Sbjct: 173 VECFYGGGEPVSVNIQTIETVKPQIVVGTPGRLKDLICERKALKVDRLKYFIL 225
>UniRef50_UPI0001509D93 Cluster: DEAD/DEAH box helicase family
protein; n=1; Tetrahymena thermophila SB210|Rep:
DEAD/DEAH box helicase family protein - Tetrahymena
thermophila SB210
Length = 476
Score = 104 bits (249), Expect = 2e-21
Identities = 55/151 (36%), Positives = 86/151 (56%), Gaps = 3/151 (1%)
Frame = +1
Query: 208 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 387
+F+ L+ +LLR + GFE+PS +Q + I + G+DV+ QA++GTGKTA F +S+L
Sbjct: 39 SFNDFSLKQDLLRSVKEAGFERPSEVQHQCIPNAIHGKDVLCQAKAGTGKTAVFVLSVLN 98
Query: 388 TLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQ- 564
L + L+L TRELA QI+ LG F N + A GG DI L +
Sbjct: 99 QLPDDAKPFSCLVLCHTRELAFQIKNEFKRLGKFTNFKVKAVYGGVEESVDIHTLKTKKP 158
Query: 565 HVVSGTPGRVFDMIRRR--VLRTRSIKMLVL 651
H++ TPGR +I+ + V+ T++I+ ++
Sbjct: 159 HILVATPGRCLSLIKAKPSVIETQNIEYFII 189
>UniRef50_Q4SJI2 Cluster: Chromosome 4 SCAF14575, whole genome
shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
Chromosome 4 SCAF14575, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 532
Score = 104 bits (249), Expect = 2e-21
Identities = 61/175 (34%), Positives = 99/175 (56%), Gaps = 9/175 (5%)
Frame = +1
Query: 151 SEDLSNVEFDTSEDVEVIPT-------FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPI 309
S+ LS+VE DT E V F SMGL + +G+ G++ P+ IQ+++I I
Sbjct: 12 SDYLSDVEPDTREMVRAQNKKKKKSGGFQSMGLSFPVFKGVMRKGYKVPTPIQRKTIPVI 71
Query: 310 VKGRDVIAQAQSGTGKTATFSISILQTLDTTLRET--QVLILSPTRELATQIQKVILALG 483
+ G+DV+A A++G+GKTA F I + + L +T + LILSPTRELA Q K LG
Sbjct: 72 LDGKDVVAMARTGSGKTAAFLIPMFERLKAPQAQTGARALILSPTRELALQTMKFTKELG 131
Query: 484 DFMNVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIRRRVLRTRSIKMLV 648
F ++ +GG ++ + L ++ GTPGR+ +I+ L+ ++++ +V
Sbjct: 132 KFTKLKTALILGGDSMDDQFAALHENPDIIIGTPGRLMHVIKEMNLKLQNVEYVV 186
>UniRef50_Q6D2K3 Cluster: ATP-independent RNA helicase; n=6;
Proteobacteria|Rep: ATP-independent RNA helicase -
Erwinia carotovora subsp. atroseptica (Pectobacterium
atrosepticum)
Length = 460
Score = 104 bits (249), Expect = 2e-21
Identities = 54/149 (36%), Positives = 88/149 (59%), Gaps = 1/149 (0%)
Frame = +1
Query: 208 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 387
+F S+ L E L + G+ + + +Q ++ ++ G DV A+A++G+GKTA F I +L
Sbjct: 5 SFSSLALPAEQLSNLNELGYTEMTPVQAATLPAVLSGADVRAKAKTGSGKTAAFGIGLLD 64
Query: 388 TLDTTLRETQVLILSPTRELATQIQKVILALGDF-MNVQCHACIGGTNLGEDIRKLDYGQ 564
+ + TQ L+L PTRELA Q+ K + L F N++ GG +G+ + L +
Sbjct: 65 RIVVSDFTTQALVLCPTRELADQVSKELRRLARFAQNIKILTLCGGQPMGQQLDSLVHAP 124
Query: 565 HVVSGTPGRVFDMIRRRVLRTRSIKMLVL 651
H+V GTPGR+ D +R++ L S+K+LVL
Sbjct: 125 HIVVGTPGRIQDHLRKQSLALDSLKVLVL 153
>UniRef50_Q6AMK6 Cluster: Probable ATP-dependent RNA helicase; n=1;
Desulfotalea psychrophila|Rep: Probable ATP-dependent
RNA helicase - Desulfotalea psychrophila
Length = 632
Score = 104 bits (249), Expect = 2e-21
Identities = 53/148 (35%), Positives = 84/148 (56%)
Frame = +1
Query: 208 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 387
+F L+ +L+ + GF +P+ IQ+++I ++ G D+I QAQ+GTGKTA F + +L
Sbjct: 56 SFTDFNLKSDLVANLVKLGFSQPTPIQEKAIPLLLAGSDLIGQAQTGTGKTAAFGLPLLN 115
Query: 388 TLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQH 567
+D + + Q L+L+PTRELA Q+ + GG++ + L G
Sbjct: 116 NIDFSKKCVQALVLAPTRELAQQVGDALATYSGDDGRNVLVVYGGSSYQAQVGGLRRGAR 175
Query: 568 VVSGTPGRVFDMIRRRVLRTRSIKMLVL 651
VV GTPGR+ D+IR+ L+ +K LVL
Sbjct: 176 VVVGTPGRLLDLIRQGSLKLDQLKTLVL 203
>UniRef50_Q5FUQ9 Cluster: ATP-dependent RNA helicase; n=11; cellular
organisms|Rep: ATP-dependent RNA helicase -
Gluconobacter oxydans (Gluconobacter suboxydans)
Length = 793
Score = 104 bits (249), Expect = 2e-21
Identities = 59/159 (37%), Positives = 89/159 (55%), Gaps = 3/159 (1%)
Frame = +1
Query: 184 SEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTA 363
+EDV P F +GL + ++R I G+E P+ IQ ++I ++KG DV+ AQ+GTGKTA
Sbjct: 284 AEDVSDRPRFADLGLSEPIMRAIEELGYEHPTPIQAQAIPEVLKGHDVLGVAQTGTGKTA 343
Query: 364 TFSISILQTL---DTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLG 534
+F++ +LQ L R + LIL PTRELA Q+ + G ++ + IGG ++
Sbjct: 344 SFTLPMLQKLAGSRARARMPRSLILEPTRELALQVAENFKLYGKYLRLTHALLIGGESMA 403
Query: 535 EDIRKLDYGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVL 651
E L+ G V+ TPGR+ D+ R L LV+
Sbjct: 404 EQRDVLNRGVDVLIATPGRLLDLFGRGGLLLTQTSTLVI 442
>UniRef50_Q3AZR1 Cluster: DEAD/DEAH box helicase-like; n=2;
Synechococcus|Rep: DEAD/DEAH box helicase-like -
Synechococcus sp. (strain CC9902)
Length = 458
Score = 104 bits (249), Expect = 2e-21
Identities = 56/173 (32%), Positives = 102/173 (58%), Gaps = 4/173 (2%)
Frame = +1
Query: 145 ILSEDLSNVEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRD 324
+ ++D S + + D TF+ + L E +R I G+ P+ IQ +I +++G+D
Sbjct: 4 VSAKDHSPIISNLKNDNNNTLTFEQLELCAETVRSIKESGYLSPTPIQALTIPEVLQGKD 63
Query: 325 VIAQAQSGTGKTATFSISILQTL---DTTLR-ETQVLILSPTRELATQIQKVILALGDFM 492
++A AQ+GTGKTA F + I++ L D R + L+L+PTRELA Q++ A ++
Sbjct: 64 IMASAQTGTGKTAAFILPIIELLRAEDKPKRYQVHSLVLTPTRELAAQVEASAKAYTKYL 123
Query: 493 NVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVL 651
++ A GG ++ +++L G ++ TPGR+ D+I ++++R ++K+LVL
Sbjct: 124 ALRSDAVFGGVSIRPQVKRLQGGVDILVATPGRLLDLINQKMIRFDNLKVLVL 176
>UniRef50_Q39MK8 Cluster: DEAD/DEAH box helicase; n=10;
Proteobacteria|Rep: DEAD/DEAH box helicase -
Burkholderia sp. (strain 383) (Burkholderia cepacia
(strain ATCC 17760/ NCIB 9086 / R18194))
Length = 481
Score = 104 bits (249), Expect = 2e-21
Identities = 55/153 (35%), Positives = 93/153 (60%), Gaps = 5/153 (3%)
Frame = +1
Query: 208 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 387
+F S+GL D LLR + ++ P+ +Q ++I ++ G+DV+A AQ+GTGKTA F++ +LQ
Sbjct: 2 SFASLGLIDPLLRNLQDLNYQAPTPVQAKAIPAVLGGKDVMAGAQTGTGKTAGFALPLLQ 61
Query: 388 TL-----DTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKL 552
L + +VL+L PTRELA Q+ + +A G ++++ A GG ++ + KL
Sbjct: 62 RLVQHGPAVSSNRARVLVLVPTRELAEQVLQSFIAYGKGLDLRFLAAYGGVSINPQMMKL 121
Query: 553 DYGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVL 651
G V+ TPGR+ D+ R+ ++ ++ LVL
Sbjct: 122 RKGVDVLVATPGRLLDLNRQNAVQFDQVQTLVL 154
>UniRef50_O34750 Cluster: YfmL protein; n=5; Bacillus|Rep: YfmL
protein - Bacillus subtilis
Length = 376
Score = 104 bits (249), Expect = 2e-21
Identities = 47/130 (36%), Positives = 84/130 (64%)
Frame = +1
Query: 262 GFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQTLDTTLRETQVLILSPTR 441
GF+KP+ +Q+++ I+ G+DVIA++ +GTGKT +++ +L+ + + Q +IL+P+R
Sbjct: 23 GFQKPTPVQEQAAQLIMDGKDVIAESPTGTGKTLAYALPVLERIKPEQKHPQAVILAPSR 82
Query: 442 ELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIRRRVL 621
EL QI +VI ++ + IGG N+ + + KL H++ GTPGRVF++I+ + L
Sbjct: 83 ELVMQIFQVIQDWKAGSELRAASLIGGANVKKQVEKLKKHPHIIVGTPGRVFELIKAKKL 142
Query: 622 RTRSIKMLVL 651
+ +K +VL
Sbjct: 143 KMHEVKTIVL 152
>UniRef50_A7HKQ8 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Fervidobacterium nodosum Rt17-B1|Rep: DEAD/DEAH box
helicase domain protein - Fervidobacterium nodosum
Rt17-B1
Length = 571
Score = 104 bits (249), Expect = 2e-21
Identities = 58/150 (38%), Positives = 90/150 (60%), Gaps = 3/150 (2%)
Frame = +1
Query: 211 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILP--IVKGRDVIAQAQSGTGKTATFSISIL 384
F+ GL +E+L I G+EKP+ IQ + +LP + +D+IAQAQ+GTGKTA F I +L
Sbjct: 20 FEDFGLSEEILLAIQKKGYEKPTEIQ-KIVLPYALSTDKDLIAQAQTGTGKTAAFGIPLL 78
Query: 385 QTLDTTLRE-TQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYG 561
+ +D + + +I++PTRELA QI + + +L V+ GG +L + + L+ G
Sbjct: 79 ERIDFKANKFVKAIIVTPTRELALQIFEELKSLKGTKRVKITTLYGGQSLEKQFKDLEKG 138
Query: 562 QHVVSGTPGRVFDMIRRRVLRTRSIKMLVL 651
+V GTPGR+ D + R L ++ LVL
Sbjct: 139 VDIVVGTPGRIIDHLNRDTLDLSHVEYLVL 168
>UniRef50_A7CUH7 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Opitutaceae bacterium TAV2|Rep: DEAD/DEAH box
helicase domain protein - Opitutaceae bacterium TAV2
Length = 536
Score = 104 bits (249), Expect = 2e-21
Identities = 54/156 (34%), Positives = 84/156 (53%), Gaps = 3/156 (1%)
Frame = +1
Query: 193 VEVIP---TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTA 363
VE+ P F +GL D L + G+ +P+ IQ +++ ++ GRDV AQ+GTGKTA
Sbjct: 126 VEIPPQDTAFSKLGLNDALAFAVTEMGYTEPTPIQAQAVPAVLAGRDVTGSAQTGTGKTA 185
Query: 364 TFSISILQTLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDI 543
F++ IL L R + L+L PTRELA Q+++ + ++ GG G+
Sbjct: 186 AFALPILHKLGAHERRLRCLVLEPTRELALQVEEAFQKYSKYTDLTATVVYGGVGYGKQR 245
Query: 544 RKLDYGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVL 651
L G VV+ TPGR+ D I + + +++LVL
Sbjct: 246 EDLQRGVDVVAATPGRLLDHIEQGTMTLADVEILVL 281
>UniRef50_A6VTY7 Cluster: DEAD/DEAH box helicase domain protein;
n=48; root|Rep: DEAD/DEAH box helicase domain protein -
Marinomonas sp. MWYL1
Length = 463
Score = 104 bits (249), Expect = 2e-21
Identities = 51/152 (33%), Positives = 93/152 (61%), Gaps = 4/152 (2%)
Frame = +1
Query: 208 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 387
+F+ +GL +L+ I G+ +PSAIQ ++I I++G+DV+A AQ+GTGKTA F++ +L+
Sbjct: 6 SFNKLGLSAPILKAIEDQGYTEPSAIQAQAIPAILEGQDVMAAAQTGTGKTAGFTLPLLE 65
Query: 388 TL----DTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLD 555
L + + + L+L+PTRELA Q+ + + G ++++ GG + + L
Sbjct: 66 ILSKGENAQSNQVRALVLTPTRELAAQVAESVKNYGQHLSLKSTVVFGGVKINPQMMALR 125
Query: 556 YGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVL 651
G ++ TPGR+ D+ ++ +R +++LVL
Sbjct: 126 RGADILIATPGRMMDLYNQKAVRFDKLEVLVL 157
>UniRef50_A5G1U8 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Acidiphilium cryptum JF-5|Rep: DEAD/DEAH box
helicase domain protein - Acidiphilium cryptum (strain
JF-5)
Length = 525
Score = 104 bits (249), Expect = 2e-21
Identities = 57/160 (35%), Positives = 88/160 (55%), Gaps = 5/160 (3%)
Frame = +1
Query: 187 EDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTAT 366
++ V+ F ++GL + LLR I +E P+ IQ RSI +++G D++ AQ+GTGKTA
Sbjct: 51 DESAVLTDFTTLGLAEPLLRAISEQSYETPTPIQARSIPVMLEGHDLVGIAQTGTGKTAA 110
Query: 367 FSISILQTLDTTL-----RETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNL 531
F + IL + R + L+L+PTRELATQI G F IGG
Sbjct: 111 FVLPILHRIAANRARPAPRACRALVLAPTRELATQIADAARTYGKFTRPSVAVVIGGAKP 170
Query: 532 GEDIRKLDYGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVL 651
G R+++ G ++ TPGR+ D + V+R +++ +VL
Sbjct: 171 GPQARRMESGVDLLVATPGRLLDHVAAGVIRLDAVETVVL 210
>UniRef50_A0KTC9 Cluster: DEAD/DEAH box helicase domain protein;
n=132; Bacteria|Rep: DEAD/DEAH box helicase domain
protein - Shewanella sp. (strain ANA-3)
Length = 578
Score = 104 bits (249), Expect = 2e-21
Identities = 50/152 (32%), Positives = 94/152 (61%), Gaps = 4/152 (2%)
Frame = +1
Query: 208 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 387
+F S+GL + + + G++ PS IQ ++I ++ G+DV+A AQ+GTGKTA F++ +L+
Sbjct: 2 SFSSLGLSAPIQKAVTEQGYDTPSPIQAQAIPAVLTGKDVMAAAQTGTGKTAGFTLPLLE 61
Query: 388 TLDTTLR----ETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLD 555
L + + + L+L+PTRELA Q+ + + G ++ ++ GG + I+KL
Sbjct: 62 LLSKGNKAKAGQIRALVLTPTRELAAQVSESVETYGKYLPLRSAVVFGGVPINPQIQKLR 121
Query: 556 YGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVL 651
+G V+ TPGR+ D+ +++ ++ +++LVL
Sbjct: 122 HGVDVLVATPGRLLDLEQQKAVKFNQLEVLVL 153
>UniRef50_Q15T34 Cluster: DEAD/DEAH box helicase-like; n=1;
Pseudoalteromonas atlantica T6c|Rep: DEAD/DEAH box
helicase-like - Pseudoalteromonas atlantica (strain T6c
/ BAA-1087)
Length = 458
Score = 103 bits (248), Expect = 3e-21
Identities = 54/151 (35%), Positives = 91/151 (60%), Gaps = 4/151 (2%)
Frame = +1
Query: 208 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 387
+F+++GLRDEL+ I T G+ + IQ+ +I ++ D++A AQ+GTGKTA F++ +LQ
Sbjct: 2 SFEALGLRDELIHAIATQGYSVATDIQREAIPLVLAQHDLLAVAQTGTGKTAAFTLPLLQ 61
Query: 388 TL----DTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLD 555
L T ++ + LI++PTRELA Q+ + +N++ A GG + I +L
Sbjct: 62 RLAAKQSTKVQGVRSLIVTPTRELAAQVAISVEIYSTQLNIRSFAVYGGVRIEPQIAQLQ 121
Query: 556 YGQHVVSGTPGRVFDMIRRRVLRTRSIKMLV 648
G V+ TPGR+ D+ +R L ++++LV
Sbjct: 122 EGVDVLIATPGRLLDLYEQRALHFENLEILV 152
>UniRef50_A6NQG8 Cluster: Putative uncharacterized protein; n=2;
Bacteroidales|Rep: Putative uncharacterized protein -
Bacteroides capillosus ATCC 29799
Length = 636
Score = 103 bits (248), Expect = 3e-21
Identities = 57/151 (37%), Positives = 86/151 (56%), Gaps = 3/151 (1%)
Frame = +1
Query: 208 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 387
TF +GL +L+ + G+EKPS IQ+++I P + GRDV+ AQ+GTGKT F+ ILQ
Sbjct: 2 TFRELGLTQSILKALAELGYEKPSPIQEKAIPPALAGRDVLGCAQTGTGKTCAFAAPILQ 61
Query: 388 TLDTTL---RETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDY 558
L + R + LIL+PTRELA QIQ+ A G + ++ GG + KL
Sbjct: 62 RLGGDIPAGRPIRSLILTPTRELALQIQESFEAYGKHLPLRSAVIFGGVGQQPQVDKLKK 121
Query: 559 GQHVVSGTPGRVFDMIRRRVLRTRSIKMLVL 651
G ++ TPGR+ D+ + + +++ VL
Sbjct: 122 GVDILVATPGRLLDLQGQGFVDLSRLEIFVL 152
>UniRef50_A5FST0 Cluster: DEAD/DEAH box helicase domain protein;
n=8; Bacteria|Rep: DEAD/DEAH box helicase domain protein
- Dehalococcoides sp. BAV1
Length = 561
Score = 103 bits (248), Expect = 3e-21
Identities = 53/149 (35%), Positives = 89/149 (59%), Gaps = 1/149 (0%)
Frame = +1
Query: 208 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 387
+F+S ++ G+ G+++P+ IQ ++I PI+ G DVI AQ+GTGKTA +++ I+Q
Sbjct: 2 SFESFNFDPAVMAGVRACGYKEPTPIQAQAIPPIMAGHDVIGLAQTGTGKTAAYALPIIQ 61
Query: 388 TLDTTLR-ETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQ 564
+ +T R + L+++PTRELA QI +LG ++ + GG N+ + IR+L G
Sbjct: 62 KMLSTPRGRVRTLVIAPTRELACQISDSFRSLGQRARIRECSIYGGVNMDQQIRRLRSGV 121
Query: 565 HVVSGTPGRVFDMIRRRVLRTRSIKMLVL 651
VV PGR+ D I R + ++ L++
Sbjct: 122 DVVVACPGRLLDHIWRGTIDVCGVETLII 150
>UniRef50_A3WD13 Cluster: DNA and RNA helicase; n=2;
Alphaproteobacteria|Rep: DNA and RNA helicase -
Erythrobacter sp. NAP1
Length = 484
Score = 103 bits (248), Expect = 3e-21
Identities = 53/152 (34%), Positives = 92/152 (60%), Gaps = 5/152 (3%)
Frame = +1
Query: 211 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATF---SISI 381
F +GL +L+ + G+ P+ IQ+++I P+++GRD++ AQ+GTGKTA F SI
Sbjct: 4 FSDLGLSQPVLQALDLKGYSTPTPIQEQAIPPVLEGRDLLGIAQTGTGKTAAFMLPSIDR 63
Query: 382 LQTLDTTL--RETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLD 555
L+ D + + ++L+L+PTREL +QI G ++ + +GGT++ +D KL
Sbjct: 64 LREADNRIPFKSCRMLVLAPTRELVSQIAASAKDYGALAGLKVQSIVGGTSVNKDRNKLH 123
Query: 556 YGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVL 651
G ++ TPGR+ D+I ++ S+++LVL
Sbjct: 124 RGTDILIATPGRLLDLIDQKAFNLGSVEVLVL 155
>UniRef50_Q01PH0 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Solibacter usitatus Ellin6076|Rep: DEAD/DEAH box
helicase domain protein - Solibacter usitatus (strain
Ellin6076)
Length = 422
Score = 103 bits (247), Expect = 4e-21
Identities = 52/149 (34%), Positives = 86/149 (57%), Gaps = 2/149 (1%)
Frame = +1
Query: 211 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 390
F + L +L + F +P+ IQ +I P + G+D++A AQ+GTGKT F + +Q
Sbjct: 4 FSELPLSAQLKSNLAKNNFTEPTPIQSLAIEPALAGKDIVATAQTGTGKTLAFLLPTIQL 63
Query: 391 LDTTLRETQV--LILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQ 564
L T R+ V LIL+PTRELA QI + +L + ++ +GG N +R + G
Sbjct: 64 LSTEPRQPGVRALILTPTRELALQINEALLQIARGTGIRAAVAVGGLNERSQLRDIRGGA 123
Query: 565 HVVSGTPGRVFDMIRRRVLRTRSIKMLVL 651
++V TPGR++D + R ++ +++ML+L
Sbjct: 124 NIVVATPGRLYDFMSRGLINLTTVRMLIL 152
>UniRef50_A7CSF3 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Opitutaceae bacterium TAV2|Rep: DEAD/DEAH box
helicase domain protein - Opitutaceae bacterium TAV2
Length = 343
Score = 103 bits (247), Expect = 4e-21
Identities = 53/148 (35%), Positives = 84/148 (56%), Gaps = 1/148 (0%)
Frame = +1
Query: 211 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 390
F +GL L+RG+ G+ P+ +Q R+I ++ GRD++A AQ+GTGKTA F++ +L
Sbjct: 3 FSKLGLPSSLVRGVQAMGYVDPTPVQLRAIPVVLAGRDLVASAQTGTGKTAAFALPVLAR 62
Query: 391 L-DTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQH 567
L +VL+L PTREL Q++ G F +V+ GG G+ L G
Sbjct: 63 LGGHRPGGPRVLVLEPTRELGAQVETAFRDFGRFTDVRSTIIHGGVGYGKQRSDLRAGTD 122
Query: 568 VVSGTPGRVFDMIRRRVLRTRSIKMLVL 651
+V T GR+ D I+ + +R S+++L+L
Sbjct: 123 IVIATVGRLMDFIKEKEIRLDSVEVLIL 150
>UniRef50_A3ZWP8 Cluster: ATP-dependent RNA helicase; n=1;
Blastopirellula marina DSM 3645|Rep: ATP-dependent RNA
helicase - Blastopirellula marina DSM 3645
Length = 428
Score = 103 bits (247), Expect = 4e-21
Identities = 58/149 (38%), Positives = 83/149 (55%), Gaps = 2/149 (1%)
Frame = +1
Query: 211 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 390
+ M L E+ + + +PS IQ I ++GRDV+ QA++GTGKTA F I I++
Sbjct: 6 YADMALSVEMKAALEAARYIQPSPIQAAIIPLALEGRDVLGQARTGTGKTAAFGIPIIER 65
Query: 391 LD--TTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQ 564
L+ R Q LIL+PTRELA Q++ I L + A GG L + KL
Sbjct: 66 LEHGPNSRNPQALILTPTRELAVQVRDEIAKLTHGQRINVVAVYGGKPLRSQMEKLKRAP 125
Query: 565 HVVSGTPGRVFDMIRRRVLRTRSIKMLVL 651
H+V GTPGRV D++ RR L+ ++ +VL
Sbjct: 126 HIVVGTPGRVIDLMTRRALQLEMLRTVVL 154
>UniRef50_Q55BR9 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 508
Score = 103 bits (247), Expect = 4e-21
Identities = 60/149 (40%), Positives = 84/149 (56%), Gaps = 1/149 (0%)
Frame = +1
Query: 208 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 387
TF+ +GL L+ GF+ PS IQ +I I+KGRD+IA A++G+GKTA+F+I IL
Sbjct: 5 TFEELGLTTWLVANCKQLGFKAPSNIQANTIPEILKGRDIIASAKTGSGKTASFAIPILN 64
Query: 388 TLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQH 567
L +IL+PTRELA QI + A+G MNV C IGG + LD H
Sbjct: 65 QLSEDPYGVFAVILTPTRELAVQIGEQFNAIGAPMNVNCSVVIGGIDNVTQALILDKRPH 124
Query: 568 VVSGTPGRVFDMIRRRV-LRTRSIKMLVL 651
++ TPGR+ + + + + K LVL
Sbjct: 125 IIVATPGRLASHLNNGLKIALKFCKFLVL 153
>UniRef50_Q11039 Cluster: Cold-shock DEAD box protein A homolog;
n=31; Bacteria|Rep: Cold-shock DEAD box protein A
homolog - Mycobacterium tuberculosis
Length = 563
Score = 103 bits (247), Expect = 4e-21
Identities = 56/149 (37%), Positives = 83/149 (55%), Gaps = 1/149 (0%)
Frame = +1
Query: 208 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 387
TF + + +LR I G+E P+AIQ +I ++ G DV+ AQ+GTGKTA F+I +L
Sbjct: 14 TFADLQIHPRVLRAIGDVGYESPTAIQAATIPALMAGSDVVGLAQTGTGKTAAFAIPMLS 73
Query: 388 TLDTTLRETQVLILSPTRELATQIQKVILALGDFMN-VQCHACIGGTNLGEDIRKLDYGQ 564
+D T + Q L+L PTRELA Q+ + G +++ + GG++ + L G
Sbjct: 74 KIDITSKVPQALVLVPTRELALQVAEAFGRYGAYLSQLNVLPIYGGSSYAVQLAGLRRGA 133
Query: 565 HVVSGTPGRVFDMIRRRVLRTRSIKMLVL 651
VV GTPGR+ D + R L + LVL
Sbjct: 134 QVVVGTPGRMIDHLERATLDLSRVDFLVL 162
>UniRef50_Q89UH0 Cluster: Dead-box ATP-dependent RNA helicase; n=23;
Alphaproteobacteria|Rep: Dead-box ATP-dependent RNA
helicase - Bradyrhizobium japonicum
Length = 530
Score = 103 bits (246), Expect = 5e-21
Identities = 57/160 (35%), Positives = 89/160 (55%), Gaps = 5/160 (3%)
Frame = +1
Query: 187 EDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTAT 366
E ++ +F GL + + R + + P+ IQ ++I + GRDV+ AQ+GTGKTA+
Sbjct: 10 ERTHLLTSFQDFGLAEPIARALSEENYVTPTPIQAQTIPTALTGRDVVGIAQTGTGKTAS 69
Query: 367 FSISILQTL-----DTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNL 531
F++ IL L + T+VL+LSPTREL+ QI A G + + IGG +
Sbjct: 70 FALPILHRLLEHRIKPQPKTTRVLVLSPTRELSGQILDSFNAYGRHIRLSSTLAIGGVPM 129
Query: 532 GEDIRKLDYGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVL 651
G +R L G V+ TPGR+ D+++ L+ S++ LVL
Sbjct: 130 GRQVRSLMQGVEVLVATPGRLLDLVQSNGLKLGSVEFLVL 169
>UniRef50_A4B5L7 Cluster: ATP-dependent RNA helicase DbpA; n=3;
Proteobacteria|Rep: ATP-dependent RNA helicase DbpA -
Alteromonas macleodii 'Deep ecotype'
Length = 459
Score = 103 bits (246), Expect = 5e-21
Identities = 52/151 (34%), Positives = 87/151 (57%), Gaps = 1/151 (0%)
Frame = +1
Query: 202 IPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISI 381
+ T + + + + + + G + S IQ +S+ ++G+DVI QAQ+G+GKT F I
Sbjct: 3 VETVKQLDINPAITKALDSQGIHQLSPIQAQSLPDALQGKDVIGQAQTGSGKTLCFVIPA 62
Query: 382 LQTLDTTLRETQVLILSPTRELATQI-QKVILALGDFMNVQCHACIGGTNLGEDIRKLDY 558
L+ ++ TQ ++L PTRELA Q+ Q+ A D N++ GG +G I+ L +
Sbjct: 63 LEKIEVNDFSTQAIMLCPTRELAEQVAQQCRSAAKDIGNIKVTTLCGGQPMGPQIQSLKH 122
Query: 559 GQHVVSGTPGRVFDMIRRRVLRTRSIKMLVL 651
H++ GTPGRV D + +R + R++K+ VL
Sbjct: 123 SPHIIVGTPGRVMDHVEKRRIDLRNVKLRVL 153
>UniRef50_A4RIF1 Cluster: ATP-dependent RNA helicase DBP5; n=7;
Ascomycota|Rep: ATP-dependent RNA helicase DBP5 -
Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 504
Score = 103 bits (246), Expect = 5e-21
Identities = 64/163 (39%), Positives = 93/163 (57%), Gaps = 5/163 (3%)
Frame = +1
Query: 178 DTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKG---RDVIAQAQSG 348
DT + I +F +GL ++ G+ F+KPS IQ R+ LP++ R++IAQ+QSG
Sbjct: 87 DTDSPLSSISSFSELGLPQGIIDGLLAMNFKKPSKIQARA-LPLMLSNPPRNMIAQSQSG 145
Query: 349 TGKTATFSISILQTLD-TTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGT 525
TGKT F ++IL +D + Q L L+P+RELA QIQ VI ++G F C +
Sbjct: 146 TGKTGAFVVTILSRVDFNQPNQPQALALAPSRELARQIQSVIQSIGQF----CTGLVVDA 201
Query: 526 NL-GEDIRKLDYGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVL 651
+ G R+ +VV GTPG V D+IRRR +K+LV+
Sbjct: 202 AIPGAISRETGVKANVVVGTPGTVMDLIRRRQFDVSQLKLLVV 244
>UniRef50_Q5NML9 Cluster: DNA and RNA helicase; n=28;
Alphaproteobacteria|Rep: DNA and RNA helicase -
Zymomonas mobilis
Length = 458
Score = 102 bits (245), Expect = 6e-21
Identities = 55/157 (35%), Positives = 92/157 (58%), Gaps = 5/157 (3%)
Frame = +1
Query: 196 EVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSI 375
E +F ++GL L++ + G+ KP+ IQ ++I +++G+D+ AQ+GTGKTA F++
Sbjct: 3 ETSVSFKTLGLDSSLVQALDGLGYSKPTPIQAQAIPHLLEGKDLCGIAQTGTGKTAAFAL 62
Query: 376 SILQTLDTT-----LRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGED 540
+ L T R ++LILSPTRELA+QI + + + +A GG +G
Sbjct: 63 PSIHYLATNPQARPQRGCRMLILSPTRELASQIARACNDYTRHLRMSVNAVFGGVPIGRQ 122
Query: 541 IRKLDYGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVL 651
+R LD G ++ TPGR+ D+I +R L + +++ VL
Sbjct: 123 MRMLDRGTDILVATPGRLLDLIDQRALVLKDVEVFVL 159
>UniRef50_Q0G0P8 Cluster: Superfamily II DNA and RNA helicase; n=2;
Aurantimonadaceae|Rep: Superfamily II DNA and RNA
helicase - Fulvimarina pelagi HTCC2506
Length = 457
Score = 102 bits (245), Expect = 6e-21
Identities = 58/153 (37%), Positives = 86/153 (56%), Gaps = 5/153 (3%)
Frame = +1
Query: 208 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 387
TFD GL + L R + P+ IQ+R+I + GRD++ AQ+GTGKTA F++ +L
Sbjct: 5 TFDGFGLAEPLTRALARLELTTPTPIQERAIPHALAGRDMLGIAQTGTGKTAAFALPLLH 64
Query: 388 TLDT-----TLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKL 552
L T T R T+ LILSPTRELA QI + I L + + GG ++ I+ L
Sbjct: 65 HLMTVGGKPTTRTTKALILSPTRELAVQIAESIADLSEGTPISHCVVFGGVSVRPQIQAL 124
Query: 553 DYGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVL 651
G ++ TPGR+ D++ +R + R + L+L
Sbjct: 125 ARGVDILVATPGRLLDLMEQRAIDLRETRHLIL 157
>UniRef50_Q2NEZ7 Cluster: Predicted helicase; n=6; cellular
organisms|Rep: Predicted helicase - Methanosphaera
stadtmanae (strain DSM 3091)
Length = 583
Score = 102 bits (245), Expect = 6e-21
Identities = 54/148 (36%), Positives = 82/148 (55%), Gaps = 1/148 (0%)
Frame = +1
Query: 211 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 390
F + + E+ + + GFE+ S IQ +I I+ +DV QAQ+GTGKTA F I +L+
Sbjct: 6 FKDLNISPEIQKAVADMGFEEASPIQSLAIPQILAHKDVTGQAQTGTGKTAAFGIPLLEN 65
Query: 391 LDTTLRETQVLILSPTRELATQIQKVILALGDFM-NVQCHACIGGTNLGEDIRKLDYGQH 567
+D+ Q +IL PTRELA Q+ + + L ++ + GG + I+ L G
Sbjct: 66 IDSEDNNLQAIILCPTRELAIQVAEELRKLSVYLPKIDVLPVYGGQPIDRQIKALQKGVQ 125
Query: 568 VVSGTPGRVFDMIRRRVLRTRSIKMLVL 651
++ GTPGRV D I R L +IK ++L
Sbjct: 126 IIIGTPGRVMDHIDRGTLSLNNIKTVIL 153
>UniRef50_Q09719 Cluster: ATP-dependent RNA helicase dbp10; n=2;
Schizosaccharomyces pombe|Rep: ATP-dependent RNA
helicase dbp10 - Schizosaccharomyces pombe (Fission
yeast)
Length = 848
Score = 102 bits (245), Expect = 6e-21
Identities = 58/148 (39%), Positives = 86/148 (58%), Gaps = 2/148 (1%)
Frame = +1
Query: 211 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 390
F SMGL LLR I+ GF+ P+ IQ+++I +++GRDV+ A++G+GKTA F I +++
Sbjct: 71 FQSMGLNQTLLRAIFKKGFKAPTPIQRKTIPLLLEGRDVVGMARTGSGKTAAFVIPMIEH 130
Query: 391 LDTTL--RETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQ 564
L +TL T+ LILSP RELA Q KV+ +++ A +GG +L E L
Sbjct: 131 LKSTLANSNTRALILSPNRELALQTVKVVKDFSKGTDLRSVAIVGGVSLEEQFSLLSGKP 190
Query: 565 HVVSGTPGRVFDMIRRRVLRTRSIKMLV 648
+V TPGR + L SI+ +V
Sbjct: 191 DIVVATPGRFLHLKVEMKLELSSIEYVV 218
>UniRef50_Q4Q2Z6 Cluster: ATP-dependent RNA helicase, putative; n=7;
Trypanosomatidae|Rep: ATP-dependent RNA helicase,
putative - Leishmania major
Length = 803
Score = 102 bits (244), Expect = 9e-21
Identities = 56/149 (37%), Positives = 86/149 (57%), Gaps = 2/149 (1%)
Frame = +1
Query: 211 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 390
F S L LL I GF P+ IQ+++I P+++G DV+A A++G+GKTA F I +L T
Sbjct: 24 FQSFNLEKPLLDAILKQGFSVPTPIQRKAIPPMLQGNDVVAMARTGSGKTAAFLIPMLNT 83
Query: 391 LDTTLRETQV--LILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQ 564
L + + L+LSPTREL+ QI + AL F++++ A +GG ++ + L
Sbjct: 84 LKAHAKIVGIRGLVLSPTRELSLQILRNGFALNKFLDLRFAALVGGDSMDQQFELLASNP 143
Query: 565 HVVSGTPGRVFDMIRRRVLRTRSIKMLVL 651
VV TPGR+ ++ L S++ LVL
Sbjct: 144 DVVVATPGRLLHIMEEASLHLTSVRCLVL 172
>UniRef50_Q2PZC2 Cluster: Vasa protein; n=3; Apidae|Rep: Vasa
protein - Apis mellifera (Honeybee)
Length = 630
Score = 102 bits (244), Expect = 9e-21
Identities = 60/173 (34%), Positives = 102/173 (58%), Gaps = 11/173 (6%)
Frame = +1
Query: 166 NVEFDTSED--VEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQA 339
N++ + S D + I +F++ GLR+ +L I G++KP+ +Q+ ++ I+ GRD++A A
Sbjct: 181 NIQVNVSGDNVPQPIESFEAAGLRNIVLDNIKKSGYKKPTPVQKHALPIIMNGRDLMACA 240
Query: 340 QSGTGKTATFSISILQTL---------DTTLRETQVLILSPTRELATQIQKVILALGDFM 492
Q+G+GKTA F++ I+ TL +T E QV+I+SPTREL QI + I+
Sbjct: 241 QTGSGKTAAFAVPIINTLLERSVDLVVTSTYCEPQVVIVSPTRELTIQIWQQIVKFSLNS 300
Query: 493 NVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVL 651
++ GGT++ KL G H++ TPGR+ D + + ++ S++ LVL
Sbjct: 301 ILKTVVAYGGTSVMHQRGKLSAGCHILVATPGRLLDFVEKGRVKFSSVQFLVL 353
>UniRef50_UPI0000585111 Cluster: PREDICTED: hypothetical protein;
n=1; Strongylocentrotus purpuratus|Rep: PREDICTED:
hypothetical protein - Strongylocentrotus purpuratus
Length = 1117
Score = 101 bits (243), Expect = 1e-20
Identities = 54/112 (48%), Positives = 74/112 (66%), Gaps = 1/112 (0%)
Frame = +1
Query: 319 RDVIAQAQSGTGKTATFSISILQTLDTTLRETQVLILSPTRELATQIQKVILALG-DFMN 495
+D+I QA+SGTGKT FS+ L+ +D T TQVLIL+PTRE+A QIQ I A+G +
Sbjct: 4 QDLIVQAKSGTGKTCVFSVIALEGIDLTNPSTQVLILAPTREIAVQIQDTIRAIGCEMEG 63
Query: 496 VQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVL 651
++ H IGGT G D +KL H+ GTPGR+ +I VL+T +I++ VL
Sbjct: 64 LRSHVFIGGTLFGPDRQKLK-KCHIAVGTPGRIKQLIEYEVLKTGTIRLFVL 114
>UniRef50_Q9KLE2 Cluster: ATP-dependent RNA helicase DeaD; n=35;
Vibrionales|Rep: ATP-dependent RNA helicase DeaD -
Vibrio cholerae
Length = 663
Score = 101 bits (243), Expect = 1e-20
Identities = 51/135 (37%), Positives = 81/135 (60%), Gaps = 1/135 (0%)
Frame = +1
Query: 211 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 390
F + L +L + GF P+ IQ +I +++GRD + +AQ+GTGKTA FS+ +L
Sbjct: 28 FSDLALNSAILSALTEMGFVSPTPIQAAAIPVLLEGRDALGKAQTGTGKTAAFSLPLLNK 87
Query: 391 LDTTLRETQVLILSPTRELATQIQKVILALG-DFMNVQCHACIGGTNLGEDIRKLDYGQH 567
L+ + + Q ++++PTRELA Q+ I LG + ++ GG ++ + +R L G H
Sbjct: 88 LNLSQYKPQAIVMAPTRELAIQVAAEIKNLGQNIKGLKVLEIYGGASILDQMRALKSGAH 147
Query: 568 VVSGTPGRVFDMIRR 612
+V GTPGRV D+I R
Sbjct: 148 IVVGTPGRVKDLITR 162
>UniRef50_Q8SY39 Cluster: LD28101p; n=3; Diptera|Rep: LD28101p -
Drosophila melanogaster (Fruit fly)
Length = 827
Score = 101 bits (243), Expect = 1e-20
Identities = 57/148 (38%), Positives = 86/148 (58%), Gaps = 2/148 (1%)
Frame = +1
Query: 211 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 390
F SMGL EL++GI G++ P+ IQ+++I I++GRDV+A A++G+GKTA F I + +
Sbjct: 41 FQSMGLGFELIKGITKRGYKVPTPIQRKTIPLILEGRDVVAMAKTGSGKTACFLIPLFEK 100
Query: 391 LD--TTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQ 564
L + + LILSPTRELA Q K I LG FM ++ +GG ++ +
Sbjct: 101 LQRREPTKGARALILSPTRELAVQTYKFIKELGRFMELKSILVLGGDSMDSQFSAIHTCP 160
Query: 565 HVVSGTPGRVFDMIRRRVLRTRSIKMLV 648
V+ TPGR + L+ SI+ +V
Sbjct: 161 DVIVATPGRFLHLCVEMDLKLNSIEYVV 188
>UniRef50_UPI0000499A01 Cluster: DEAD/DEAH box helicase; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: DEAD/DEAH box
helicase - Entamoeba histolytica HM-1:IMSS
Length = 684
Score = 101 bits (242), Expect = 1e-20
Identities = 52/146 (35%), Positives = 84/146 (57%), Gaps = 1/146 (0%)
Frame = +1
Query: 211 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 390
F SMGL + L G+ G+ P+ IQ+++I I++G D+IA A++G+GKTA + + I+
Sbjct: 15 FQSMGLNKQTLLGVLKKGYRVPTPIQRKAIPAILRGNDIIAMARTGSGKTAAYLVPIINR 74
Query: 391 LDTTLRE-TQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQH 567
L+T E + LI+ PTRELA Q KV LG N++ IGG+ L + L G
Sbjct: 75 LETHSTEGVRSLIICPTRELALQTIKVFNELGKLTNLKASLIIGGSKLSDQFDNLSSGPD 134
Query: 568 VVSGTPGRVFDMIRRRVLRTRSIKML 645
++ TPGR+ ++ + ++M+
Sbjct: 135 IIVATPGRLTFILEGANISLNRVEMV 160
>UniRef50_Q9S531 Cluster: DEAD-box protein; n=4;
Cystobacterineae|Rep: DEAD-box protein - Myxococcus
xanthus
Length = 808
Score = 101 bits (242), Expect = 1e-20
Identities = 50/147 (34%), Positives = 82/147 (55%)
Frame = +1
Query: 211 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 390
FD M L + + + G+ P+ +Q R+ P ++G+D+I ++++GTGKTA F + +L+
Sbjct: 31 FDDMNLSEPIRLALAERGYTNPTPVQARAFRPAIEGKDLIVRSKTGTGKTAAFGLPLLEK 90
Query: 391 LDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQHV 570
+ R + LIL PTRELA Q+ + L ++ A GG ++ + L+ G +
Sbjct: 91 IPADERRVRALILCPTRELALQVADELKMLAKHKGLKIAAIYGGASMKQQEDALEEGTPI 150
Query: 571 VSGTPGRVFDMIRRRVLRTRSIKMLVL 651
+ GTPGRVFD I R L+ + VL
Sbjct: 151 IVGTPGRVFDHINRGNLKLDACDHAVL 177
>UniRef50_Q4N4B1 Cluster: ATP-dependent RNA helicase, putative; n=4;
Eukaryota|Rep: ATP-dependent RNA helicase, putative -
Theileria parva
Length = 470
Score = 101 bits (242), Expect = 1e-20
Identities = 57/162 (35%), Positives = 96/162 (59%), Gaps = 1/162 (0%)
Frame = +1
Query: 169 VEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSG 348
VE D +D + PTF+ +G+ EL R G+++P+ IQ +I + G+D+I A++G
Sbjct: 30 VEEDDDKDDDT-PTFEDLGVCVELCRACKELGWKRPTKIQIEAIPIALSGKDIIGLAETG 88
Query: 349 TGKTATFSISILQTLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTN 528
+GKTA F+I ILQ L + LIL+PTREL+ QI++ +++LG + + +GG +
Sbjct: 89 SGKTAAFTIPILQKLLEKPQRLFSLILAPTRELSLQIKEQLISLGSEIGLDVCLILGGLD 148
Query: 529 LGEDIRKLDYGQHVVSGTPGRVFDMIRR-RVLRTRSIKMLVL 651
+ +L H++ G+PGR+ D ++ + +IK LVL
Sbjct: 149 MVSQALQLSKKPHIIVGSPGRIADHLQNTKGFSLETIKYLVL 190
>UniRef50_Q9LYJ9 Cluster: DEAD-box ATP-dependent RNA helicase 46;
n=16; Eukaryota|Rep: DEAD-box ATP-dependent RNA helicase
46 - Arabidopsis thaliana (Mouse-ear cress)
Length = 645
Score = 101 bits (242), Expect = 1e-20
Identities = 54/152 (35%), Positives = 87/152 (57%), Gaps = 4/152 (2%)
Frame = +1
Query: 208 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 387
+F++ GL +ELLR +Y+ GF PS IQ +S ++ RD++A A++G+GKT + I
Sbjct: 162 SFEATGLPNELLREVYSAGFSAPSPIQAQSWPIAMQNRDIVAIAKTGSGKTLGYLIPGFM 221
Query: 388 TLDTTLRETQ----VLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLD 555
L +++ +L+LSPTRELATQIQ L G + C GG G +++++
Sbjct: 222 HLQRIHNDSRMGPTILVLSPTRELATQIQVEALKFGKSSKISCACLYGGAPKGPQLKEIE 281
Query: 556 YGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVL 651
G +V TPGR+ D++ + + + LVL
Sbjct: 282 RGVDIVVATPGRLNDILEMKRISLHQVSYLVL 313
>UniRef50_Q8EZ11 Cluster: ATP-dependent RNA helicase; n=4;
Leptospira|Rep: ATP-dependent RNA helicase - Leptospira
interrogans
Length = 521
Score = 101 bits (241), Expect = 2e-20
Identities = 55/148 (37%), Positives = 80/148 (54%), Gaps = 1/148 (0%)
Frame = +1
Query: 211 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 390
F + L E+ I GFE+ S IQ +I I+KG+D+I AQ+GTGKTA F+I ++
Sbjct: 11 FSELNLSAEIQNAILEMGFEEASPIQSEAIPVILKGKDIIGHAQTGTGKTAAFAIPTIEL 70
Query: 391 LDTTLRETQVLILSPTRELATQIQKVILALGDFM-NVQCHACIGGTNLGEDIRKLDYGQH 567
L+ + Q LIL PTREL Q+ + L + N + GG + +R L
Sbjct: 71 LEVESKHLQALILCPTRELVIQVSEQFRKLIKYKGNFEVVPIYGGQEIERQLRALRKNPQ 130
Query: 568 VVSGTPGRVFDMIRRRVLRTRSIKMLVL 651
+V TPGR+ D +RR + IK++VL
Sbjct: 131 IVIATPGRMMDHMRRGSIHLDEIKIVVL 158
>UniRef50_Q8A2K2 Cluster: ATP-dependent RNA helicase; n=10; cellular
organisms|Rep: ATP-dependent RNA helicase - Bacteroides
thetaiotaomicron
Length = 647
Score = 101 bits (241), Expect = 2e-20
Identities = 52/151 (34%), Positives = 88/151 (58%), Gaps = 3/151 (1%)
Frame = +1
Query: 208 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGR--DVIAQAQSGTGKTATFSISI 381
TF+ +G+ E+ + I G+E P +Q+ ++P + G DV+A AQ+GTGKTA F + +
Sbjct: 3 TFEELGVSPEIRKAIEEMGYENPMPVQEE-VIPYLLGENNDVVALAQTGTGKTAAFGLPL 61
Query: 382 LQTLDTTLRETQVLILSPTRELATQIQKVILALGDFMN-VQCHACIGGTNLGEDIRKLDY 558
LQ +D R Q LIL PTREL QI + +++ ++ GG+++ IR L
Sbjct: 62 LQQIDVKNRVPQSLILCPTRELCLQIAGDLNDYSKYIDGLKVLPVYGGSSIDSQIRSLKR 121
Query: 559 GQHVVSGTPGRVFDMIRRRVLRTRSIKMLVL 651
G H++ TPGR+ D++ R+ + ++ +V+
Sbjct: 122 GVHIIVATPGRLLDLMERKTVSLSTVHNIVM 152
>UniRef50_Q31AC4 Cluster: DEAD/DEAH box helicase-like protein; n=7;
Prochlorococcus marinus|Rep: DEAD/DEAH box helicase-like
protein - Prochlorococcus marinus (strain MIT 9312)
Length = 593
Score = 101 bits (241), Expect = 2e-20
Identities = 55/149 (36%), Positives = 85/149 (57%), Gaps = 2/149 (1%)
Frame = +1
Query: 211 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 390
F G +L + G++ P+ IQ+ +I ++ GRD++ QAQ+GTGKTA F++ +++
Sbjct: 53 FLDFGFNQSILNSLSNKGYKNPTPIQKAAIPELMLGRDLLGQAQTGTGKTAAFALPLIEK 112
Query: 391 L-DTTLRETQVLILSPTRELATQIQKVILAL-GDFMNVQCHACIGGTNLGEDIRKLDYGQ 564
L D +VL+++PTRELATQ+ + + + N + A GGT+ I L
Sbjct: 113 LADNKELNAKVLVMTPTRELATQVAESFKSYSSESTNFKTIAIYGGTDYRNQIYALKRKV 172
Query: 565 HVVSGTPGRVFDMIRRRVLRTRSIKMLVL 651
VV GTPGR+ D IR+ + SI LVL
Sbjct: 173 DVVVGTPGRIMDHIRQGTFKVNSINCLVL 201
>UniRef50_A5UZK3 Cluster: DEAD/DEAH box helicase domain protein;
n=12; Bacteria|Rep: DEAD/DEAH box helicase domain
protein - Roseiflexus sp. RS-1
Length = 467
Score = 101 bits (241), Expect = 2e-20
Identities = 58/149 (38%), Positives = 82/149 (55%), Gaps = 1/149 (0%)
Frame = +1
Query: 208 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 387
+FDS ++ GI G+ P+ IQ++ I + GRDVI AQ+GTGKTA F + ILQ
Sbjct: 2 SFDSFRFHPQITAGIRDLGYHTPTPIQEQVIPHALDGRDVIGIAQTGTGKTAAFVLPILQ 61
Query: 388 TLDTTLR-ETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQ 564
L R + +I++PTRELA QIQ VI ALG + ++ GG I++L G
Sbjct: 62 RLMRGPRGRVRAMIVTPTRELAEQIQGVIEALGKYTGLRSVTLYGGVGYQGQIQRLRRGV 121
Query: 565 HVVSGTPGRVFDMIRRRVLRTRSIKMLVL 651
+ PGR+ D + R L + ML+L
Sbjct: 122 EIAVVCPGRLLDHLERGTLTLEHLDMLIL 150
>UniRef50_A2U1Q9 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family protein; n=4; Flavobacteriaceae|Rep:
ATP-dependent RNA helicase, DEAD/DEAH box family protein
- Polaribacter dokdonensis MED152
Length = 373
Score = 101 bits (241), Expect = 2e-20
Identities = 53/151 (35%), Positives = 83/151 (54%), Gaps = 3/151 (1%)
Frame = +1
Query: 208 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKG-RDVIAQAQSGTGKTATFSISIL 384
TF +G+R + ++ I G KP+ IQ+++I ++K D I AQ+GTGKTA F + +L
Sbjct: 3 TFAGLGIRKDYIKSIKEIGITKPTDIQEKAIPVLLKSPTDFIGLAQTGTGKTAAFGLPVL 62
Query: 385 QTLDTTLRETQVLILSPTRELATQIQKVILALGDFMN--VQCHACIGGTNLGEDIRKLDY 558
+D Q LILSPTREL QI+K + +++ + A GG + + L
Sbjct: 63 HHIDANSDHIQALILSPTRELVQQIKKQLFKFTKYVDDRIFLEAVFGGEKIDRQMNNLKR 122
Query: 559 GQHVVSGTPGRVFDMIRRRVLRTRSIKMLVL 651
H+V TPGR+ D+I R + +K ++L
Sbjct: 123 TTHIVIATPGRLIDLIERGAVDISHVKTVIL 153
>UniRef50_Q3LWE1 Cluster: Translation initiation factor 4A2; n=1;
Bigelowiella natans|Rep: Translation initiation factor
4A2 - Bigelowiella natans (Pedinomonas minutissima)
(Chlorarachnion sp.(strain CCMP 621))
Length = 378
Score = 101 bits (241), Expect = 2e-20
Identities = 53/150 (35%), Positives = 83/150 (55%)
Frame = +1
Query: 202 IPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISI 381
+ +F + L++ + +G++ S IQ +++P++KGRD+I Q+ SGTGKT + I
Sbjct: 9 VKSFFDLKLKNSIKKGVFINAMYYCSKIQSITLIPLLKGRDIIYQSPSGTGKTTCYIIGT 68
Query: 382 LQTLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYG 561
L ++ Q LIL PTREL+ QI+ V L + +C GG LGED++ L
Sbjct: 69 SNQLCQSINSPQCLILVPTRELSIQIRNVFNVLNIYTKNSITSCHGGRWLGEDLKNLKKN 128
Query: 562 QHVVSGTPGRVFDMIRRRVLRTRSIKMLVL 651
H + GTPGRV +++ L I+ VL
Sbjct: 129 FHGIVGTPGRVLHLLQIGSLAITKIRTFVL 158
>UniRef50_Q1IMK6 Cluster: DEAD/DEAH box helicase-like; n=1;
Acidobacteria bacterium Ellin345|Rep: DEAD/DEAH box
helicase-like - Acidobacteria bacterium (strain
Ellin345)
Length = 423
Score = 100 bits (240), Expect = 3e-20
Identities = 60/151 (39%), Positives = 85/151 (56%), Gaps = 1/151 (0%)
Frame = +1
Query: 202 IPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISI 381
+ TF+ M L D L + + F P+ +Q+++I P + GRD++A AQ+GTGKT F I
Sbjct: 26 LTTFNDMPLSDVLKQRLEAAQFINPTPVQEKAIPPALDGRDILATAQTGTGKTLAFIIPA 85
Query: 382 LQTL-DTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDY 558
L+ L DT QVLIL PTRELA Q+ V L +GGT+ I+ +
Sbjct: 86 LEMLRDTEPCGVQVLILVPTRELAMQVHGVYEQLKGKKLKSAALVMGGTSERNQIQSIRS 145
Query: 559 GQHVVSGTPGRVFDMIRRRVLRTRSIKMLVL 651
G VV TPGR+ D + RR++ ++MLVL
Sbjct: 146 GARVVVATPGRLEDYMGRRLVDLSQVEMLVL 176
>UniRef50_Q17BP5 Cluster: DEAD box ATP-dependent RNA helicase; n=2;
Culicidae|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 1061
Score = 100 bits (240), Expect = 3e-20
Identities = 65/165 (39%), Positives = 95/165 (57%), Gaps = 2/165 (1%)
Frame = +1
Query: 163 SNVEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVK-GRDVIAQA 339
++VEFD S F M L + +LRG+ F PS IQ R+I P+ K G D++ QA
Sbjct: 14 ADVEFDLSLQ------FSKMFLSEPVLRGLTRNNFTHPSPIQARAI-PLAKLGLDLLVQA 66
Query: 340 QSGTGKTATFSISILQTLDTTLRETQVLILSPTRELATQIQKVILALG-DFMNVQCHACI 516
+SGTGKT F++ I + + + Q L + PTRE+A QI+ V+ +G N + + I
Sbjct: 67 KSGTGKTLVFTVLITENHNPDVMFPQSLTVVPTREIAVQIEDVLNRIGYSVPNFRAKSFI 126
Query: 517 GGTNLGEDIRKLDYGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVL 651
GG ++ +D + L VV GTPGR+ +I+ VL T IK+LVL
Sbjct: 127 GGLDISQDRKNLQSCSAVV-GTPGRINHLIKSNVLNTSQIKILVL 170
>UniRef50_Q13838 Cluster: Spliceosome RNA helicase BAT1; n=55;
Eukaryota|Rep: Spliceosome RNA helicase BAT1 - Homo
sapiens (Human)
Length = 428
Score = 100 bits (240), Expect = 3e-20
Identities = 57/144 (39%), Positives = 79/144 (54%), Gaps = 2/144 (1%)
Frame = +1
Query: 226 LRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQTLDTTL 405
L+ ELLR I GFE PS +Q I + G DV+ QA+SG GKTA F ++ LQ L+
Sbjct: 52 LKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQLEPVT 111
Query: 406 RETQVLILSPTRELATQIQKVILALGDFM-NVQCHACIGGTNLGEDIRKLDYG-QHVVSG 579
+ VL++ TRELA QI K +M NV+ GG ++ +D L H+V G
Sbjct: 112 GQVSVLVMCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCPHIVVG 171
Query: 580 TPGRVFDMIRRRVLRTRSIKMLVL 651
TPGR+ + R + L + IK +L
Sbjct: 172 TPGRILALARNKSLNLKHIKHFIL 195
>UniRef50_Q9LUW5 Cluster: DEAD-box ATP-dependent RNA helicase 53;
n=14; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 53 - Arabidopsis thaliana (Mouse-ear cress)
Length = 616
Score = 100 bits (240), Expect = 3e-20
Identities = 54/150 (36%), Positives = 87/150 (58%), Gaps = 6/150 (4%)
Frame = +1
Query: 220 MGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQTL-- 393
+G+ E+++ + + G EK IQ+ + P ++GRD+I +A++GTGKT F I I+ +
Sbjct: 109 LGISPEIVKALSSKGIEKLFPIQKAVLEPAMEGRDMIGRARTGTGKTLAFGIPIIDKIIK 168
Query: 394 ----DTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYG 561
R L+L+PTRELA Q++K ++ C GGT +G+ +R+LDYG
Sbjct: 169 YNAKHGRGRNPLCLVLAPTRELARQVEKEFRESAPSLDTIC--LYGGTPIGQQMRQLDYG 226
Query: 562 QHVVSGTPGRVFDMIRRRVLRTRSIKMLVL 651
V GTPGRV D+++R L ++ +VL
Sbjct: 227 VDVAVGTPGRVIDLMKRGALNLSEVQFVVL 256
>UniRef50_Q8SQK9 Cluster: ATP-dependent RNA helicase DHH1; n=1;
Encephalitozoon cuniculi|Rep: ATP-dependent RNA helicase
DHH1 - Encephalitozoon cuniculi
Length = 489
Score = 100 bits (240), Expect = 3e-20
Identities = 47/136 (34%), Positives = 88/136 (64%)
Frame = +1
Query: 211 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 390
++S+GL LL+ I G++ PS +Q SI ++ G++++ ++++GTGKTA++ + +L
Sbjct: 110 WESLGLGPVLLKRIRDIGYDFPSPVQVASIPHVLGGKNLLVRSKNGTGKTASYIVPMLNM 169
Query: 391 LDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQHV 570
++++ Q +IL P RELA QI + + + + V +GGT++ +DI ++ G HV
Sbjct: 170 INSSELSIQGIILVPIRELALQISRNVKRMSEGTGVISAPVVGGTSMQDDIIRVSNGVHV 229
Query: 571 VSGTPGRVFDMIRRRV 618
+ GTPGR+ D++ +RV
Sbjct: 230 MVGTPGRIVDLVEKRV 245
>UniRef50_UPI00015B5D7B Cluster: PREDICTED: similar to LD28101p;
n=1; Nasonia vitripennis|Rep: PREDICTED: similar to
LD28101p - Nasonia vitripennis
Length = 782
Score = 99 bits (238), Expect = 5e-20
Identities = 52/148 (35%), Positives = 85/148 (57%), Gaps = 2/148 (1%)
Frame = +1
Query: 211 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 390
F SMGL ++RGI G++ P+ IQ+++I + GRDV+A A++G+GKTA F I + +
Sbjct: 40 FQSMGLSQSVIRGILKRGYKIPTPIQRKTIPIALDGRDVVAMARTGSGKTACFLIPMFEK 99
Query: 391 LDTTLRET--QVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQ 564
L T +T + LILSPTRELA Q Q+ I +G F ++ +GG ++ +
Sbjct: 100 LKTRQAKTGARALILSPTRELALQTQRFIKEIGRFTGLKSSVILGGDSMDNQFSAIHGNP 159
Query: 565 HVVSGTPGRVFDMIRRRVLRTRSIKMLV 648
++ TPGR + + +SI+ ++
Sbjct: 160 DIIVATPGRFLHICIEMDMNLKSIEFVI 187
>UniRef50_Q6MN67 Cluster: ATP-dependent RNA helicase; n=3;
Deltaproteobacteria|Rep: ATP-dependent RNA helicase -
Bdellovibrio bacteriovorus
Length = 505
Score = 99 bits (238), Expect = 5e-20
Identities = 58/148 (39%), Positives = 86/148 (58%), Gaps = 1/148 (0%)
Frame = +1
Query: 211 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 390
F ++ L ELL + GFE + IQQ SI ++ G+D+I QA++G+GKTA FS+ IL
Sbjct: 49 FSTLPLSPELLTVVQELGFETLTPIQQESIPLLLAGKDIIGQAKTGSGKTAAFSLPILNK 108
Query: 391 LDTTLRETQVLILSPTRELATQIQKVILALGDFM-NVQCHACIGGTNLGEDIRKLDYGQH 567
++ Q LIL PTRELA+Q+ I LG + ++ A GG + E L+ G
Sbjct: 109 INLDQPLLQALILCPTRELASQVVTEIRKLGRRLPGLKVLAMTGGQSGREQADALENGVQ 168
Query: 568 VVSGTPGRVFDMIRRRVLRTRSIKMLVL 651
+V GTPGR+ D + R + ++K +VL
Sbjct: 169 IVVGTPGRLADFVGRNRIDLSAVKTVVL 196
>UniRef50_A0VLH7 Cluster: DEAD/DEAH box helicase domain protein;
n=2; Rhodobacteraceae|Rep: DEAD/DEAH box helicase domain
protein - Dinoroseobacter shibae DFL 12
Length = 508
Score = 99 bits (238), Expect = 5e-20
Identities = 54/152 (35%), Positives = 85/152 (55%), Gaps = 5/152 (3%)
Frame = +1
Query: 211 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 390
FD +GL L+ G+ P+ IQ R+I + GRDV+ AQ+GTGKTA F + +L
Sbjct: 73 FDMLGLSPRLVAGLAAQNITDPTPIQTRAIPHGLNGRDVLGIAQTGTGKTAAFGLPLLDA 132
Query: 391 L-----DTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLD 555
L R + LIL+PTREL +QI + + A + +++ +GG +G I++ +
Sbjct: 133 LMKAGTKPAPRTCRGLILAPTRELVSQICESLRAFTEGSHLKLQVIVGGVAIGPQIKRAE 192
Query: 556 YGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVL 651
G ++ TPGR+ D++ R+ LR + LVL
Sbjct: 193 RGADLIVATPGRLIDLLDRKALRLSETRFLVL 224
>UniRef50_Q2LZJ8 Cluster: GA19670-PA; n=1; Drosophila
pseudoobscura|Rep: GA19670-PA - Drosophila pseudoobscura
(Fruit fly)
Length = 1007
Score = 99 bits (238), Expect = 5e-20
Identities = 58/171 (33%), Positives = 99/171 (57%), Gaps = 3/171 (1%)
Frame = +1
Query: 148 LSEDLSNVEFDTSEDVEV--IPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGR 321
++ +L+N + TS DVE + F ++ LR +++RG+ F P+ IQ +I + G
Sbjct: 5 IAHNLANGQNRTS-DVEAGQMKHFSALHLRRQVMRGLAAENFRTPTKIQAAAIPIALTGM 63
Query: 322 DVIAQAQSGTGKTATFSISILQTLDTTLRETQVLILSPTRELATQIQKVILALGD-FMNV 498
D++ Q++SGTGKT + ++ LQ + + +VL++ PTRELA Q+ + LG+ +
Sbjct: 64 DLLVQSKSGTGKTLIYVVTALQMCSLSTQHPEVLVILPTRELALQVHDIFRFLGEKLRSF 123
Query: 499 QCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVL 651
+ + +GGT++ D KL HV GTPGR+ + + VL +K+LVL
Sbjct: 124 KVSSFMGGTDVTRDREKL-RNCHVAIGTPGRLLQLHEKGVLNMSMVKLLVL 173
>UniRef50_Q2FKY7 Cluster: DEAD/DEAH box helicase-like; n=1;
Methanospirillum hungatei JF-1|Rep: DEAD/DEAH box
helicase-like - Methanospirillum hungatei (strain JF-1 /
DSM 864)
Length = 531
Score = 99 bits (238), Expect = 5e-20
Identities = 53/151 (35%), Positives = 81/151 (53%), Gaps = 1/151 (0%)
Frame = +1
Query: 202 IPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISI 381
IP+F + L +++ I G+E+P+ IQQ I I+ G DV QA +GTGKTA F I
Sbjct: 3 IPSFSDLQLSPGIIKAIRDIGYEEPTPIQQEVIPLILAGNDVAGQAYTGTGKTAAFGIPA 62
Query: 382 LQTLDTTLRETQVLILSPTRELATQIQKVILALG-DFMNVQCHACIGGTNLGEDIRKLDY 558
++ R Q ++L P+RELA Q+ + L + GG + I+ L
Sbjct: 63 IELCQPANRNVQTIVLCPSRELAVQVGTELNKLAMHKKGISILPVYGGQPIERQIKALSR 122
Query: 559 GQHVVSGTPGRVFDMIRRRVLRTRSIKMLVL 651
G ++ GTPGRV D I+R+ L ++ ++VL
Sbjct: 123 GVQIIIGTPGRVIDHIKRKTLLLDAVSLVVL 153
>UniRef50_A0RUV7 Cluster: Superfamily II helicase; n=3;
Thermoprotei|Rep: Superfamily II helicase - Cenarchaeum
symbiosum
Length = 434
Score = 99 bits (238), Expect = 5e-20
Identities = 54/147 (36%), Positives = 84/147 (57%)
Frame = +1
Query: 211 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 390
F+ +G++ +L + GFEK IQ+ +I ++ GRDV+ QA +GTGKT +SIS+LQ
Sbjct: 4 FEELGIKQNVLDALRDMGFEKAFPIQEAAIPVLLTGRDVVGQAHTGTGKTGAYSISMLQE 63
Query: 391 LDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQHV 570
+ Q LI++PTRELA QI + + + V+ A GG ++G + L G +
Sbjct: 64 IKEG-GGIQGLIVAPTRELAVQITEEVKKFAKYTKVRPVAIYGGQSMGVQLDALKRGAEI 122
Query: 571 VSGTPGRVFDMIRRRVLRTRSIKMLVL 651
+ TPGR+ D I+R + + LVL
Sbjct: 123 LVATPGRLIDHIKRGSISIDRVTHLVL 149
>UniRef50_Q835K0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=55; Lactobacillales|Rep: ATP-dependent RNA
helicase, DEAD/DEAH box family - Enterococcus faecalis
(Streptococcus faecalis)
Length = 449
Score = 99.5 bits (237), Expect = 6e-20
Identities = 51/147 (34%), Positives = 86/147 (58%), Gaps = 3/147 (2%)
Frame = +1
Query: 202 IPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISI 381
+P+F + + + GFE+P+ +Q++ I I KG+ VI Q+Q+G+GKT TF + +
Sbjct: 1 MPSFKQFQFQPFINEALAEKGFEEPTEVQEKLIPIIKKGKSVIGQSQTGSGKTHTFLLPL 60
Query: 382 LQTLDTTLRETQVLILSPTRELATQIQKVILALGDFM--NVQCHACIGGTNLGEDIRKLD 555
+ + T+ E Q++I +P+RELA QI + L F ++ +GGT+ + KL
Sbjct: 61 MDKVKPTIDEVQIVITAPSRELANQIYQEAQQLARFSQPEIRVSNFVGGTDKQRQLNKLK 120
Query: 556 YGQ-HVVSGTPGRVFDMIRRRVLRTRS 633
+ Q HVV GTPGR+ DM+ + L+ +
Sbjct: 121 HQQPHVVIGTPGRILDMMNEQALKVHT 147
>UniRef50_A6QC93 Cluster: ATP-independent RNA helicase DbpA; n=1;
Sulfurovum sp. NBC37-1|Rep: ATP-independent RNA helicase
DbpA - Sulfurovum sp. (strain NBC37-1)
Length = 453
Score = 99.5 bits (237), Expect = 6e-20
Identities = 52/141 (36%), Positives = 81/141 (57%), Gaps = 1/141 (0%)
Frame = +1
Query: 232 DELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQTLDTTLRE 411
+ LL + T GF + IQQ+SI PI+KG+D++AQ+++G+GKT F I + D +
Sbjct: 12 EALLGTLETLGFTTMTEIQQKSIGPILKGKDILAQSKTGSGKTLAFGIPAVMGTDVKSNK 71
Query: 412 TQVLILSPTRELATQIQKVILALGDF-MNVQCHACIGGTNLGEDIRKLDYGQHVVSGTPG 588
Q ++++PTRELA Q+ + + + N++ GG L L G H++ GTPG
Sbjct: 72 PQTIVITPTRELAEQVAMELRKIAAYKANLKILTLYGGVPLRAQADSLAKGAHILIGTPG 131
Query: 589 RVFDMIRRRVLRTRSIKMLVL 651
R+ D + + L SIK LVL
Sbjct: 132 RIQDHLAKGTLTLESIKTLVL 152
>UniRef50_Q9SQV1 Cluster: Probable DEAD-box ATP-dependent RNA
helicase 40; n=2; core eudicotyledons|Rep: Probable
DEAD-box ATP-dependent RNA helicase 40 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 1088
Score = 99.5 bits (237), Expect = 6e-20
Identities = 54/152 (35%), Positives = 88/152 (57%), Gaps = 4/152 (2%)
Frame = +1
Query: 208 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 387
TF+S GL E+LR + + GF P+ IQ ++ ++ RD++A A++G+GKT + I
Sbjct: 436 TFESSGLPPEILRELLSAGFPSPTPIQAQTWPIALQSRDIVAIAKTGSGKTLGYLIPAFI 495
Query: 388 TLDTTLRETQ----VLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLD 555
L +++ VLIL+PTRELATQIQ L G + C GG G +++L+
Sbjct: 496 LLRHCRNDSRNGPTVLILAPTRELATQIQDEALRFGRSSRISCTCLYGGAPKGPQLKELE 555
Query: 556 YGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVL 651
G +V TPGR+ D++ +++ + + +LVL
Sbjct: 556 RGADIVVATPGRLNDILEMKMIDFQQVSLLVL 587
>UniRef50_Q2BP56 Cluster: Putative ATP-dependent RNA helicase; n=1;
Neptuniibacter caesariensis|Rep: Putative ATP-dependent
RNA helicase - Neptuniibacter caesariensis
Length = 427
Score = 99.1 bits (236), Expect = 8e-20
Identities = 50/152 (32%), Positives = 91/152 (59%), Gaps = 4/152 (2%)
Frame = +1
Query: 208 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 387
+F + L EL + G+E+P+ IQ ++I +++G D++A+AQ+GTGKTA+F++ I++
Sbjct: 5 SFAELALCPELQFTLKNLGYEQPTPIQSQAIPLVLRGDDLLAEAQTGTGKTASFALPIIE 64
Query: 388 TLDTT----LRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLD 555
L R + L+L+PTRELA Q+ L G + ++ + GG + I++L
Sbjct: 65 KLSKNPIDGYRPVRALVLAPTRELAIQVADNTLEYGRDLGMRVISVYGGVPVENQIKRLK 124
Query: 556 YGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVL 651
G ++ TPGR+ D++R++ + ++ LVL
Sbjct: 125 RGTDILVATPGRLLDLLRQKAISLEKLEYLVL 156
>UniRef50_Q188H5 Cluster: Putative ATP-dependent RNA helicase; n=2;
Clostridium difficile|Rep: Putative ATP-dependent RNA
helicase - Clostridium difficile (strain 630)
Length = 381
Score = 99.1 bits (236), Expect = 8e-20
Identities = 53/151 (35%), Positives = 90/151 (59%), Gaps = 3/151 (1%)
Frame = +1
Query: 208 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 387
TF+ + + L+ G+ P+ +Q I I++ +D++ +Q+GTGKT + + I +
Sbjct: 3 TFEQLKISSTLIDGLKKQDITSPTEVQSLVIGNIIQNKDLLINSQTGTGKTLAYLLPIFE 62
Query: 388 TLDTTLRETQVLILSPTRELATQI--QKVILALGDFMNVQCHACIGGTNLGEDIRKLD-Y 558
+DT+ RETQ LIL+PT EL QI Q +LA ++V A IG N+ + I+ +
Sbjct: 63 KIDTSKRETQALILAPTHELVMQITNQVELLAKNAELSVTSLALIGEVNIQKQIKNIKAV 122
Query: 559 GQHVVSGTPGRVFDMIRRRVLRTRSIKMLVL 651
H+V G+ GRV D+I+++ L++ +IK +VL
Sbjct: 123 KPHIVIGSCGRVLDLIKQKKLKSHNIKTIVL 153
>UniRef50_Q12QV2 Cluster: DEAD/DEAH box helicase-like protein; n=16;
Gammaproteobacteria|Rep: DEAD/DEAH box helicase-like
protein - Shewanella denitrificans (strain OS217 / ATCC
BAA-1090 / DSM 15013)
Length = 433
Score = 99.1 bits (236), Expect = 8e-20
Identities = 56/152 (36%), Positives = 86/152 (56%), Gaps = 5/152 (3%)
Frame = +1
Query: 211 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 390
F+S E+LR I G++ + +QQ++I I +G DV+A AQ+GTGKTA F++ ILQ
Sbjct: 3 FESFSFAPEILRAIAECGYQNMTPVQQQAIPAIRRGEDVLASAQTGTGKTAAFALPILQK 62
Query: 391 L---DTTLRET--QVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLD 555
+ T++ + + LIL+PTRELA Q+ I A MN+ GG + +KL
Sbjct: 63 MHERPMTVQHSNARALILTPTRELAAQVADNISAYSKHMNISVLTIYGGMKMATQAQKLK 122
Query: 556 YGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVL 651
G ++ TPGR+ + I L +++ LVL
Sbjct: 123 QGADIIVATPGRLLEHIVACNLSLSNVEFLVL 154
>UniRef50_Q9V3C4 Cluster: CG6539-PA; n=1; Drosophila
melanogaster|Rep: CG6539-PA - Drosophila melanogaster
(Fruit fly)
Length = 1028
Score = 99.1 bits (236), Expect = 8e-20
Identities = 51/151 (33%), Positives = 88/151 (58%), Gaps = 1/151 (0%)
Frame = +1
Query: 202 IPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISI 381
+ TF+ + L LL G+ F P+ IQ +I + D+I Q++SGTGKT + I++
Sbjct: 24 VKTFEELRLYRNLLNGLKRNNFVTPTKIQAAAIPMALAKMDLIIQSKSGTGKTLIYVIAV 83
Query: 382 LQTLDTTLRETQVLILSPTRELATQIQKVILAL-GDFMNVQCHACIGGTNLGEDIRKLDY 558
+Q+ + + + +I+ PTRELA Q+Q L F + +C A IGGT++ +D ++++
Sbjct: 84 VQSFNPNINQPHAMIVVPTRELAIQVQDTFFHLCKSFRDFKCSAFIGGTDVAKDRKRMNE 143
Query: 559 GQHVVSGTPGRVFDMIRRRVLRTRSIKMLVL 651
+ V+ GTPGR+ + RV +++LVL
Sbjct: 144 SR-VIIGTPGRLLHLYENRVFDVSKLRLLVL 173
>UniRef50_O00148 Cluster: ATP-dependent RNA helicase DDX39; n=27;
Eukaryota|Rep: ATP-dependent RNA helicase DDX39 - Homo
sapiens (Human)
Length = 427
Score = 99.1 bits (236), Expect = 8e-20
Identities = 56/144 (38%), Positives = 80/144 (55%), Gaps = 2/144 (1%)
Frame = +1
Query: 226 LRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQTLDTTL 405
L+ ELLR I GFE PS +Q I + G DV+ QA+SG GKTA F ++ LQ ++
Sbjct: 51 LKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQIEPVN 110
Query: 406 RETQVLILSPTRELATQIQKVILALGDFM-NVQCHACIGGTNLGEDIRKLDYG-QHVVSG 579
+ VL++ TRELA QI K +M +V+ GG ++ +D L HVV G
Sbjct: 111 GQVTVLVMCHTRELAFQISKEYERFSKYMPSVKVSVFFGGLSIKKDEEVLKKNCPHVVVG 170
Query: 580 TPGRVFDMIRRRVLRTRSIKMLVL 651
TPGR+ ++R R +++K VL
Sbjct: 171 TPGRILALVRNRSFSLKNVKHFVL 194
>UniRef50_UPI0000E48294 Cluster: PREDICTED: similar to DEAD
(Asp-Glu-Ala-Asp) box polypeptide 21a; n=1;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
DEAD (Asp-Glu-Ala-Asp) box polypeptide 21a -
Strongylocentrotus purpuratus
Length = 657
Score = 98.7 bits (235), Expect = 1e-19
Identities = 62/188 (32%), Positives = 100/188 (53%), Gaps = 5/188 (2%)
Frame = +1
Query: 103 IRKMTSSEVSSNRKILSEDLSNVEFDTSEDV-EVIPTFDSMGLRDELLRGIYTYGFEKPS 279
++K + EV N + + S+ + + E+ E I F + G+R + + ++ G +
Sbjct: 67 VKKEKNGEVQQNGIVKEKPSSSKQGEVDEETQEKIGAFSNFGIRPKTIEKLHAKGVKYLF 126
Query: 280 AIQQRSILPIVKGRDVIAQAQSGTGKTATFSISIL----QTLDTTLRETQVLILSPTREL 447
IQ ++ PI G DVIAQA++GTGKT +F + ++ Q + R+ +L L+PTREL
Sbjct: 127 PIQAQTFKPIDDGFDVIAQARTGTGKTLSFVLPLVEKWQQFPQKSGRQPIILALAPTREL 186
Query: 448 ATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIRRRVLRT 627
A QI + A+G ++ C GGT+ + G VV GTPGR+ D IR+ L
Sbjct: 187 AKQISEYFEAIGPHLSTTC--IYGGTSYWPQESAIRRGLDVVVGTPGRILDYIRKNTLDL 244
Query: 628 RSIKMLVL 651
+K +VL
Sbjct: 245 SKLKHVVL 252
>UniRef50_Q62IF8 Cluster: ATP-dependent RNA helicase RhlE; n=59;
Betaproteobacteria|Rep: ATP-dependent RNA helicase RhlE
- Burkholderia mallei (Pseudomonas mallei)
Length = 482
Score = 98.7 bits (235), Expect = 1e-19
Identities = 53/156 (33%), Positives = 86/156 (55%), Gaps = 8/156 (5%)
Frame = +1
Query: 208 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 387
TFD GL E+L+ I G+ P+ IQ ++I ++ GRDV+ AQ+GTGKTA+FS+ I+Q
Sbjct: 12 TFDQFGLAAEILKAIAEQGYTTPTPIQAKAIPVVLSGRDVMGAAQTGTGKTASFSLPIIQ 71
Query: 388 TL--------DTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDI 543
L + LIL+PTRELA Q+ + A ++ GG ++ +
Sbjct: 72 RLLPQANTSASPARHPVRALILTPTRELADQVAANVHAYAKHTPLRSAVVFGGVDMNPQM 131
Query: 544 RKLDYGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVL 651
+L G ++ TPGR+ D ++++ +++LVL
Sbjct: 132 AELRRGVEILIATPGRLLDHVQQKTANLGQVQILVL 167
>UniRef50_A3EUK2 Cluster: Superfamily II DNA and RNA helicase; n=1;
Leptospirillum sp. Group II UBA|Rep: Superfamily II DNA
and RNA helicase - Leptospirillum sp. Group II UBA
Length = 444
Score = 98.7 bits (235), Expect = 1e-19
Identities = 51/151 (33%), Positives = 83/151 (54%), Gaps = 3/151 (1%)
Frame = +1
Query: 208 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 387
TF+++GL E+LR + G P+ IQ++SI ++ GRD++ AQ+GTGKT F + +L
Sbjct: 2 TFEALGLSPEILRALNDLGHASPTPIQKQSIPHVIDGRDLLGIAQTGTGKTGGFLLPVLH 61
Query: 388 TLDTTLR---ETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDY 558
+ R + L+LSPTRELATQI + +++ +GG + R L
Sbjct: 62 KIAEGRRHGIRNRALVLSPTRELATQIHQAAKDYAKYLHTNAVLLVGGVDFIRQERNLKR 121
Query: 559 GQHVVSGTPGRVFDMIRRRVLRTRSIKMLVL 651
+V TPGR+ D +RR L + ++++
Sbjct: 122 NWDIVVATPGRLLDHVRRNNLTLANTSLVII 152
>UniRef50_A4V6K5 Cluster: DEAD box polypeptide 19 protein; n=3;
Platyhelminthes|Rep: DEAD box polypeptide 19 protein -
Dugesia japonica (Planarian)
Length = 434
Score = 98.7 bits (235), Expect = 1e-19
Identities = 62/158 (39%), Positives = 94/158 (59%), Gaps = 6/158 (3%)
Frame = +1
Query: 133 SNRKILSE-DLSNVEFDTS--EDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSIL 303
S RK L E D NV S + + + +F+ + L+ ELL GI + GF KPS+IQ+R++
Sbjct: 21 SLRKTLVETDPINVTIKQSNADPLYSVKSFEDLQLKSELLNGISSMGFRKPSSIQERALP 80
Query: 304 PIVKG--RDVIAQAQSGTGKTATFSISILQTLDTTLRETQVLILSPTRELATQIQKVILA 477
+++ +++IAQ+QSGTGKTATF +++L +D Q L ++PTREL QI +V +
Sbjct: 81 MLLENQPKNLIAQSQSGTGKTATFLLTMLSKIDVNDPFCQCLCMAPTRELVNQIAEVAII 140
Query: 478 LGDFM-NVQCHACIGGTNLGEDIRKLDYGQHVVSGTPG 588
+ FM NV+ I G L DI + ++ GTPG
Sbjct: 141 MSKFMNNVKITCAIKG--LSPDILEGQINSQIIIGTPG 176
>UniRef50_Q8GY84 Cluster: DEAD-box ATP-dependent RNA helicase 10;
n=34; Eukaryota|Rep: DEAD-box ATP-dependent RNA helicase
10 - Arabidopsis thaliana (Mouse-ear cress)
Length = 456
Score = 98.7 bits (235), Expect = 1e-19
Identities = 60/168 (35%), Positives = 96/168 (57%), Gaps = 13/168 (7%)
Frame = +1
Query: 187 EDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTAT 366
E+ EV+ TF +G+R+EL++ G++ PS IQ ++ ++G+DVI AQ+G+GKT
Sbjct: 3 EENEVVKTFAELGVREELVKACERLGWKNPSKIQAEALPFALEGKDVIGLAQTGSGKTGA 62
Query: 367 FSISILQTLDTTLRETQ------------VLILSPTRELATQIQKVILALGDFMNVQCHA 510
F+I ILQ L + +++ +LSPTRELA QI + ALG ++++C
Sbjct: 63 FAIPILQALLEYVYDSEPKKGRRPDPAFFACVLSPTRELAIQIAEQFEALGADISLRCAV 122
Query: 511 CIGGTNLGEDIRKLDYGQHVVSGTPGRVFD-MIRRRVLRTRSIKMLVL 651
+GG + + L HV+ TPGR++D M + +S+K LVL
Sbjct: 123 LVGGIDRMQQTIALGKRPHVIVATPGRLWDHMSDTKGFSLKSLKYLVL 170
>UniRef50_Q82T78 Cluster: RhlE; ATP-dependent RNA helicase RhlE;
n=3; Nitrosomonadaceae|Rep: RhlE; ATP-dependent RNA
helicase RhlE - Nitrosomonas europaea
Length = 498
Score = 98.3 bits (234), Expect = 1e-19
Identities = 53/156 (33%), Positives = 89/156 (57%), Gaps = 8/156 (5%)
Frame = +1
Query: 208 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 387
TF +GL E+L + G+ P+ IQ + I I+ G+DV+A AQ+GTGKTA F++ +L
Sbjct: 6 TFAQLGLSSEILHAVNDEGYVNPTPIQAQVIPSILAGKDVMASAQTGTGKTAGFTLPLLY 65
Query: 388 TL----DTTL----RETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDI 543
L +T++ + LI++PTRELA QI + + G ++ ++ GG N+ I
Sbjct: 66 RLQAYANTSVSPARHPVRALIMAPTRELAMQIDESVRKYGKYLALRTAVVFGGINIEPQI 125
Query: 544 RKLDYGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVL 651
L G ++ TPGR+ D++ ++ + ++LVL
Sbjct: 126 AALQAGVEILVATPGRLLDLVEQKAVNFSKTEILVL 161
>UniRef50_Q81QF0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=25; Firmicutes|Rep: ATP-dependent RNA
helicase, DEAD/DEAH box family - Bacillus anthracis
Length = 450
Score = 98.3 bits (234), Expect = 1e-19
Identities = 54/153 (35%), Positives = 88/153 (57%), Gaps = 3/153 (1%)
Frame = +1
Query: 202 IPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISI 381
+ F +G+ + + G + + IQ+++I I+ G+D+I QA++GTGKT F + I
Sbjct: 4 LKNFLELGISETFNHTLRENGITEATPIQEKAIPVILSGKDIIGQAKTGTGKTLAFVLPI 63
Query: 382 LQTLDTTLRETQVLILSPTRELATQIQ---KVILALGDFMNVQCHACIGGTNLGEDIRKL 552
L+ +D + Q LI++PTRELA QI K +L + +NV A GG ++ + +RKL
Sbjct: 64 LEKIDPESSDVQALIVAPTRELALQITTEIKKMLVQREDINVL--AIYGGQDVAQQLRKL 121
Query: 553 DYGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVL 651
H+V TPGR+ D IRR + ++ +VL
Sbjct: 122 KGNTHIVVATPGRLLDHIRRETIDLSNLSTIVL 154
>UniRef50_Q54TJ4 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 783
Score = 98.3 bits (234), Expect = 1e-19
Identities = 56/157 (35%), Positives = 92/157 (58%), Gaps = 5/157 (3%)
Frame = +1
Query: 196 EVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSI 375
E +PTF+ + L LL+ + GF +P+ IQ ++I + G+D++A A +G+GKTA F +
Sbjct: 187 EELPTFEELHLSRPLLKAVQKLGFSQPTPIQAKAIPLALNGKDILASASTGSGKTAAFLL 246
Query: 376 SILQTL---DTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGG-TNLGEDI 543
+L+ L D+ R +VLIL PTRELA Q Q V+ L F N+ +GG +N +++
Sbjct: 247 PVLERLLFRDSEYRAIRVLILLPTRELALQCQSVMENLAQFSNITSCLIVGGLSNKAQEV 306
Query: 544 RKLDYGQHVVSGTPGRVFD-MIRRRVLRTRSIKMLVL 651
+L VV TPGR+ D ++ + +++L+L
Sbjct: 307 -ELRKSPDVVIATPGRLIDHLLNAHGIGLDDLEILIL 342
>UniRef50_UPI0000DB7226 Cluster: PREDICTED: similar to Probable
ATP-dependent RNA helicase DDX20 (DEAD box protein 20)
(DEAD box protein DP 103) (Component of gems 3)
(Gemin-3); n=1; Apis mellifera|Rep: PREDICTED: similar
to Probable ATP-dependent RNA helicase DDX20 (DEAD box
protein 20) (DEAD box protein DP 103) (Component of gems
3) (Gemin-3) - Apis mellifera
Length = 648
Score = 97.9 bits (233), Expect = 2e-19
Identities = 54/146 (36%), Positives = 91/146 (62%), Gaps = 2/146 (1%)
Frame = +1
Query: 220 MGLRDELLRGIYTYGFEKPSAIQQRSILPIVK-GRDVIAQAQSGTGKTATFSISILQTLD 396
MG ++L G+ GF++PS IQ ++I P+ + G D+I +A+SGTGKT F I L+ +D
Sbjct: 1 MGFSQKILDGLSVCGFQRPSPIQLKAI-PLGRCGFDLIMRAKSGTGKTLVFCIISLEMID 59
Query: 397 TTLRETQVLILSPTRELATQIQKVILALG-DFMNVQCHACIGGTNLGEDIRKLDYGQHVV 573
+ QVLIL+PTRE+A QI +V ++G + +++ IGG + D +K++ Q +
Sbjct: 60 IDISSVQVLILAPTREIAVQIAQVFSSVGCEIKDLKVEVFIGGLAIENDKKKVNNCQ-IA 118
Query: 574 SGTPGRVFDMIRRRVLRTRSIKMLVL 651
G PGR+ +I + L+ ++++ VL
Sbjct: 119 VGAPGRIRHLIDKGFLKVENVRLFVL 144
>UniRef50_Q2LY23 Cluster: Superfamily II DNA and RNA helicases; n=2;
Bacteria|Rep: Superfamily II DNA and RNA helicases -
Syntrophus aciditrophicus (strain SB)
Length = 572
Score = 97.9 bits (233), Expect = 2e-19
Identities = 53/151 (35%), Positives = 86/151 (56%), Gaps = 3/151 (1%)
Frame = +1
Query: 208 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGR--DVIAQAQSGTGKTATFSISI 381
TF + ++++G+ GF + +Q++ I+PIV R D++ AQ+GTGKTA F I +
Sbjct: 3 TFAEFEINTDIMKGLDGLGFSVMTPVQEK-IIPIVLNRQTDLVGLAQTGTGKTAAFGIPL 61
Query: 382 LQTLDTTLRETQVLILSPTRELATQIQKVILALGDFM-NVQCHACIGGTNLGEDIRKLDY 558
+Q DT L+ TQ L+L PTREL Q+ + +G ++ ++ GG ++ +L
Sbjct: 62 IQLTDTRLKRTQALVLCPTRELCVQVAGDLNLMGRYVQKLKIVPVYGGASIVSQTEELRK 121
Query: 559 GQHVVSGTPGRVFDMIRRRVLRTRSIKMLVL 651
G VV TPGR+ D+IRR + + +VL
Sbjct: 122 GAQVVVATPGRLHDLIRRGAVDLSGVSWVVL 152
>UniRef50_UPI0000498D8E Cluster: ATP-dependent RNA helicase; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: ATP-dependent RNA
helicase - Entamoeba histolytica HM-1:IMSS
Length = 450
Score = 97.5 bits (232), Expect = 2e-19
Identities = 55/156 (35%), Positives = 86/156 (55%), Gaps = 4/156 (2%)
Frame = +1
Query: 196 EVIP----TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTA 363
EVIP TFD +G++ LL + +G KP+ IQQ I P++ +V+ A++G+GKTA
Sbjct: 23 EVIPSDLNTFDGLGIKQFLLPTLKQFGIIKPTKIQQLCIPPLLSFHNVLGGAETGSGKTA 82
Query: 364 TFSISILQTLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDI 543
F++ I+ L T L+L+PTRELA+QI A G +N++ +GG ++ +
Sbjct: 83 AFALPIIHHLSTDPYTGFALVLTPTRELASQIADQFKAFGACINIRVVQVVGGVDVIRIL 142
Query: 544 RKLDYGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVL 651
L HV+ TPG++ +I S K L+L
Sbjct: 143 HHLSGSPHVIIATPGKLVSLIDHLPFSFDSAKFLIL 178
>UniRef50_Q4S6B9 Cluster: Chromosome 9 SCAF14729, whole genome
shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
Chromosome 9 SCAF14729, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 457
Score = 97.5 bits (232), Expect = 2e-19
Identities = 59/172 (34%), Positives = 102/172 (59%), Gaps = 5/172 (2%)
Frame = +1
Query: 151 SEDLSNVEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGR--- 321
S + ++ D S + + +F+ + L+ ELL+G+Y GF +PS IQ+ + LP++ +
Sbjct: 20 SNQVEVLQRDPSSPLYSVKSFEELRLKPELLKGVYQMGFNRPSRIQENA-LPLMMAQPAQ 78
Query: 322 DVIAQAQSGTGKTATFSISILQTLDTTLRETQVLILSPTRELATQIQKVILALGDF-MNV 498
++IAQ+QSGTGKTA F +++L ++ + Q L ++PT ELA QI +V+ +G F +V
Sbjct: 79 NLIAQSQSGTGKTAAFCLAMLGIVNPADKWPQCLCIAPTYELALQIGQVLEQMGRFCADV 138
Query: 499 QCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVFD-MIRRRVLRTRSIKMLVL 651
+ + G + +R + +V GTPG V+D +++VL + I M VL
Sbjct: 139 RLVYAVRGNRI---VRGTKVQEQIVVGTPGTVYDWCAKQKVLDPKKITMFVL 187
>UniRef50_Q81JK1 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=30; Firmicutes|Rep: ATP-dependent RNA
helicase, DEAD/DEAH box family - Bacillus anthracis
Length = 481
Score = 97.5 bits (232), Expect = 2e-19
Identities = 48/148 (32%), Positives = 84/148 (56%)
Frame = +1
Query: 208 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 387
+F + L E+ R + G+E P+ +Q I ++ +D++ ++Q+G+GKTA+F I + +
Sbjct: 5 SFSNYALSKEVRRALTGLGYEHPTEVQGEVIPVALQKKDLVVKSQTGSGKTASFGIPLCE 64
Query: 388 TLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQH 567
++ + Q L+L+PTRELA Q+++ I +G F ++ A G + +L H
Sbjct: 65 MVEWEENKPQALVLTPTRELAVQVKEDITNIGRFKRIKAAAIYGKSPFARQKLELKQKTH 124
Query: 568 VVSGTPGRVFDMIRRRVLRTRSIKMLVL 651
+V GTPGRV D I + L +K LV+
Sbjct: 125 IVVGTPGRVLDHIEKGTLSLERLKYLVI 152
>UniRef50_Q6F0U0 Cluster: ATP-dependent RNA helicase; n=1;
Mesoplasma florum|Rep: ATP-dependent RNA helicase -
Mesoplasma florum (Acholeplasma florum)
Length = 666
Score = 97.5 bits (232), Expect = 2e-19
Identities = 51/149 (34%), Positives = 88/149 (59%), Gaps = 1/149 (0%)
Frame = +1
Query: 208 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 387
TF + L D++L + F + + IQ R+I ++G+++ ++ +GTGKTA+F + IL+
Sbjct: 2 TFKELQLSDKVLVALEKANFNEATEIQARAIPLFLEGKNIFGKSSTGTGKTASFVLPILE 61
Query: 388 TLDTTLRETQVLILSPTRELATQIQKVILALGD-FMNVQCHACIGGTNLGEDIRKLDYGQ 564
++ R Q +I++PTRELA QI I G N+ IGG ++ + I++L Q
Sbjct: 62 KIEPNKRRVQAVIMAPTRELAMQIVNQIRIFGSRIENLVIAPLIGGADMRDQIKRLKDSQ 121
Query: 565 HVVSGTPGRVFDMIRRRVLRTRSIKMLVL 651
+V GTPGRV D + R+ L+ ++ ++L
Sbjct: 122 -IVVGTPGRVNDHLNRKTLKLDDVRTIIL 149
>UniRef50_O83749 Cluster: ATP-dependent RNA helicase; n=2;
Treponema|Rep: ATP-dependent RNA helicase - Treponema
pallidum
Length = 649
Score = 97.5 bits (232), Expect = 2e-19
Identities = 50/149 (33%), Positives = 83/149 (55%), Gaps = 1/149 (0%)
Frame = +1
Query: 208 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKG-RDVIAQAQSGTGKTATFSISIL 384
+F+ +GL ++ L + GF P+ IQ +I ++ G ++IA+A++GTGKTA F + ++
Sbjct: 47 SFEELGLNEQSLAAVRLKGFRCPTPIQAAAIPRLLAGDANIIAKARTGTGKTAAFGLPLI 106
Query: 385 QTLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQ 564
Q L + L+L PTRELA Q+ + +L + H GG ++ E +R L+ G
Sbjct: 107 QELGSPCEHPGALVLVPTRELAAQVASELSSLRIQKIPRIHTVYGGVSIAEQLRNLEQGG 166
Query: 565 HVVSGTPGRVFDMIRRRVLRTRSIKMLVL 651
++ GT GRV D I R L ++ +L
Sbjct: 167 EIIVGTTGRVIDHIERGSLELSYLRYFIL 195
>UniRef50_Q2BGG8 Cluster: RNA helicase DbpA; n=1; Neptuniibacter
caesariensis|Rep: RNA helicase DbpA - Neptuniibacter
caesariensis
Length = 191
Score = 97.5 bits (232), Expect = 2e-19
Identities = 53/145 (36%), Positives = 84/145 (57%), Gaps = 1/145 (0%)
Frame = +1
Query: 208 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 387
+F + L +L + G+++ +AIQQ+++ ++ +D+IA+A++G+GKTA F I +L
Sbjct: 37 SFAKLALPKSVLSNLDQLGYKEMTAIQQQALPEVLAEKDLIAKAKTGSGKTAAFGIGLLL 96
Query: 388 TLDTTLRETQVLILSPTRELATQIQKVILALGDFM-NVQCHACIGGTNLGEDIRKLDYGQ 564
L TQ L+L PTRELAT + + L F N++ GG +G I L++G
Sbjct: 97 KLRPRNFATQALVLCPTRELATHVANELRKLARFTENLKILTLCGGQPIGPQIGSLEHGA 156
Query: 565 HVVSGTPGRVFDMIRRRVLRTRSIK 639
HVV TPGR+ D +R+ L S K
Sbjct: 157 HVVVRTPGRIKDHLRKGTLSLGSAK 181
>UniRef50_A4LYS0 Cluster: DEAD/DEAH box helicase domain protein;
n=4; Desulfuromonadales|Rep: DEAD/DEAH box helicase
domain protein - Geobacter bemidjiensis Bem
Length = 482
Score = 97.5 bits (232), Expect = 2e-19
Identities = 55/152 (36%), Positives = 86/152 (56%), Gaps = 5/152 (3%)
Frame = +1
Query: 211 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 390
F + + E+ +GI GF + + IQ++++ + G+DV QAQ+GTGKTATF ISI
Sbjct: 3 FTELQIPAEVQKGIDETGFTQCTPIQEKALPLALTGKDVAGQAQTGTGKTATFLISIFTK 62
Query: 391 LDTTLR-----ETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLD 555
L + + + LIL+PTREL QI+K ALG + A GG + + L
Sbjct: 63 LLSQAKTGGEHHPRALILAPTRELVVQIEKDAQALGKYTGFNIQAIYGGVDYMKQRDALK 122
Query: 556 YGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVL 651
G +V GTPGR+ D ++++V + ++ LV+
Sbjct: 123 AGADIVIGTPGRLIDYLKQKVYSVKDVEALVI 154
>UniRef50_Q688Z4 Cluster: Putative uncharacterized protein; n=3;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 871
Score = 97.5 bits (232), Expect = 2e-19
Identities = 55/168 (32%), Positives = 94/168 (55%), Gaps = 3/168 (1%)
Frame = +1
Query: 154 EDLSNVEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIA 333
ED + ++ + + + + +GL + + I GF +P+ IQ+++I I+ G+DV+A
Sbjct: 7 EDFTQLQINQNRKHKKAGGWQQIGLDHSVYKAIEKKGFNQPTPIQRKTIPCIMDGKDVVA 66
Query: 334 QAQSGTGKTATFSISILQTL---DTTLRETQVLILSPTRELATQIQKVILALGDFMNVQC 504
+++G+GKTA F I +LQ L DTT + L++SPTRELA Q KV+ LG F ++C
Sbjct: 67 MSRTGSGKTAAFVIPMLQKLKRRDTT--GIRALMVSPTRELALQTFKVVKELGRFTGLRC 124
Query: 505 HACIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIRRRVLRTRSIKMLV 648
+GG + E + ++ TPGR+ +I LR ++ +V
Sbjct: 125 ACLVGGDQIEEQFSTIHENPDILLATPGRLLHVIVEMDLRLSYVQYVV 172
>UniRef50_Q8TDD1 Cluster: ATP-dependent RNA helicase DDX54; n=45;
Eukaryota|Rep: ATP-dependent RNA helicase DDX54 - Homo
sapiens (Human)
Length = 881
Score = 97.5 bits (232), Expect = 2e-19
Identities = 61/175 (34%), Positives = 95/175 (54%), Gaps = 9/175 (5%)
Frame = +1
Query: 151 SEDLSNVEFDTSEDVEVIPT-------FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPI 309
SE S+VE DT E V F SMGL + +GI G++ P+ IQ+++I I
Sbjct: 71 SECTSDVEPDTREMVRAQNKKKKKSGGFQSMGLSYPVFKGIMKKGYKVPTPIQRKTIPVI 130
Query: 310 VKGRDVIAQAQSGTGKTATFSISILQTLDTTLRET--QVLILSPTRELATQIQKVILALG 483
+ G+DV+A A++G+GKTA F + + + L T +T + LILSPTRELA Q K LG
Sbjct: 131 LDGKDVVAMARTGSGKTACFLLPMFERLKTHSAQTGARALILSPTRELALQTLKFTKELG 190
Query: 484 DFMNVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIRRRVLRTRSIKMLV 648
F ++ +GG + + L ++ TPGR+ + L+ +S++ +V
Sbjct: 191 KFTGLKTALILGGDRMEDQFAALHENPDIIIATPGRLVHVAVEMSLKLQSVEYVV 245
>UniRef50_Q12B10 Cluster: DEAD/DEAH box helicase-like; n=13;
Proteobacteria|Rep: DEAD/DEAH box helicase-like -
Polaromonas sp. (strain JS666 / ATCC BAA-500)
Length = 422
Score = 97.1 bits (231), Expect = 3e-19
Identities = 56/151 (37%), Positives = 82/151 (54%), Gaps = 6/151 (3%)
Frame = +1
Query: 217 SMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQTLD 396
S L LR I G+ P+AIQ ++I I+ GRDV+ AQ+G+GKTA F++ +LQ L
Sbjct: 9 SPALLPAFLRAIGDKGYRAPTAIQSQAIPAILLGRDVVGSAQTGSGKTAAFALPMLQQLA 68
Query: 397 T----TLRETQVLILSPTRELATQIQKVILALGDFM--NVQCHACIGGTNLGEDIRKLDY 558
T R T+ LIL PTRELA Q+ + I ++ V+ GG ++ + L
Sbjct: 69 NAPTGTPRPTRGLILVPTRELAAQVGEAIAGFAKYLPQRVKVAVVFGGVSINPQMMNLRG 128
Query: 559 GQHVVSGTPGRVFDMIRRRVLRTRSIKMLVL 651
G +V TPGR+ D++ L+ + LVL
Sbjct: 129 GADIVVATPGRLLDLLEHNALKISEVSTLVL 159
>UniRef50_A6G4U7 Cluster: DEAD/DEAH box helicase; n=2; Plesiocystis
pacifica SIR-1|Rep: DEAD/DEAH box helicase -
Plesiocystis pacifica SIR-1
Length = 1390
Score = 97.1 bits (231), Expect = 3e-19
Identities = 64/187 (34%), Positives = 96/187 (51%), Gaps = 10/187 (5%)
Frame = +1
Query: 121 SEVSSNRKILSEDLSN-VEFDTSEDVEVIP-----TFDSMGLRDELLRGIYTYGFEKPSA 282
SEVS + ++ SE +S V ED E P T+D M L + + + G+ P+
Sbjct: 122 SEVSGHTEVDSELVSEAVAAPEGEDAEEEPDPAPETWDEMALPEHVRNAVDAAGWTAPTK 181
Query: 283 IQQRSILPIVKGRDVIAQAQSGTGKTATFSISIL----QTLDTTLRETQVLILSPTRELA 450
+Q R+ +++G DV+ Q+Q+G+GKT F + L Q D Q+++L PTRELA
Sbjct: 182 VQARTYETMIQGTDVLVQSQTGSGKTGAFCLPWLANRFQPGDAAETGVQLIVLLPTRELA 241
Query: 451 TQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIRRRVLRTR 630
Q+ ++ L V GGT + + L G H V GTPGRV D IRR+ L
Sbjct: 242 KQVCNELVRLAIETPVDVLPVYGGTAMNPQLDALARGVHAVVGTPGRVLDHIRRKSLDLS 301
Query: 631 SIKMLVL 651
++ +VL
Sbjct: 302 KVRTVVL 308
>UniRef50_A0EIJ0 Cluster: Chromosome undetermined scaffold_99, whole
genome shotgun sequence; n=3; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_99,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 706
Score = 97.1 bits (231), Expect = 3e-19
Identities = 55/148 (37%), Positives = 85/148 (57%), Gaps = 2/148 (1%)
Frame = +1
Query: 211 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 390
F+SMGL EL R I + GF P+ IQ+++I I+ GRD++A +++G+GKTA F I ++
Sbjct: 12 FESMGLIPELYRAIKSQGFNVPTPIQRKAIPQILAGRDIVACSKTGSGKTAAFLIPLINK 71
Query: 391 LD--TTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQ 564
L +T+ + LIL PTRELA QI V+ AL F ++Q +GG L
Sbjct: 72 LQNHSTVVGIRGLILLPTRELALQIASVLKALLKFSDIQYSIMVGGHGFEGQFESLASNP 131
Query: 565 HVVSGTPGRVFDMIRRRVLRTRSIKMLV 648
++ TPGRV + L+ ++M++
Sbjct: 132 DILICTPGRVLQHLLEDRLKLSRVQMVI 159
>UniRef50_Q27268 Cluster: ATP-dependent RNA helicase WM6; n=82;
Eukaryota|Rep: ATP-dependent RNA helicase WM6 -
Drosophila melanogaster (Fruit fly)
Length = 424
Score = 97.1 bits (231), Expect = 3e-19
Identities = 58/145 (40%), Positives = 80/145 (55%), Gaps = 3/145 (2%)
Frame = +1
Query: 226 LRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQTLDTTL 405
L+ E+LR I GFE PS +Q I V G D++ QA+SG GKTA F ++ LQ L+ +
Sbjct: 48 LKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQLEPSD 107
Query: 406 RET-QVLILSPTRELATQIQKVILALGDFM-NVQCHACIGGTNLGEDIRKLDYG-QHVVS 576
T VL++ TRELA QI K +M V+ GG + +D L G H+V
Sbjct: 108 NNTCHVLVMCHTRELAFQISKEYERFSKYMPTVKVAVFFGGMAIQKDEETLKSGTPHIVV 167
Query: 577 GTPGRVFDMIRRRVLRTRSIKMLVL 651
GTPGR+ +IR + L + +K VL
Sbjct: 168 GTPGRILALIRNKKLNLKLLKHFVL 192
>UniRef50_Q6MBR0 Cluster: Putative ATP-dependent RNA helicase; n=1;
Candidatus Protochlamydia amoebophila UWE25|Rep:
Putative ATP-dependent RNA helicase - Protochlamydia
amoebophila (strain UWE25)
Length = 407
Score = 96.7 bits (230), Expect = 4e-19
Identities = 57/158 (36%), Positives = 87/158 (55%), Gaps = 4/158 (2%)
Frame = +1
Query: 190 DVEVIPT----FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGK 357
DVE++P F + L +L+ + F++PS IQ +I I K +D+IA +Q+G+GK
Sbjct: 6 DVELLPQEPNGFITFNLDPLILKALDKMNFKEPSRIQTEAIPLIQKKQDLIALSQTGSGK 65
Query: 358 TATFSISILQTLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGE 537
TAT +I I ++T L + Q LI+ PTRELA Q +G + V+ A GG +
Sbjct: 66 TATCAIPICNRVNTELTDIQALIIVPTRELALQYATETQKIGKYKGVKAFAIFGGEDSAL 125
Query: 538 DIRKLDYGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVL 651
KL +G V+ TPGR+ D I R + ++ L+L
Sbjct: 126 QQSKLKHGVQVLVATPGRLIDFIYSRQIDLSHVETLIL 163
>UniRef50_Q5NN72 Cluster: DNA and RNA helicase; n=3;
Sphingomonadales|Rep: DNA and RNA helicase - Zymomonas
mobilis
Length = 492
Score = 96.7 bits (230), Expect = 4e-19
Identities = 54/151 (35%), Positives = 84/151 (55%), Gaps = 3/151 (1%)
Frame = +1
Query: 208 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 387
+F +GL ELL+ + G+E+P+ +Q +I ++ RD+IA AQ+GTGKTA+F + ++
Sbjct: 2 SFADLGLSKELLQAVAELGYEEPTPVQAAAIPSVLMMRDLIAVAQTGTGKTASFVLPMID 61
Query: 388 TL---DTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDY 558
L R + LIL PTRELA Q+ + G + + IGG + E L+
Sbjct: 62 ILAHGRCRARMPRSLILEPTRELAAQVAENFEKYGKYHKLSMSLLIGGVPMAEQQAALEK 121
Query: 559 GQHVVSGTPGRVFDMIRRRVLRTRSIKMLVL 651
G V+ TPGR+ D+ R + S +MLV+
Sbjct: 122 GVDVLIATPGRLLDLFERGKILLSSCEMLVI 152
>UniRef50_Q0BSI7 Cluster: ATP-dependent RNA helicase; n=12;
Alphaproteobacteria|Rep: ATP-dependent RNA helicase -
Granulobacter bethesdensis (strain ATCC BAA-1260 /
CGDNIH1)
Length = 763
Score = 96.7 bits (230), Expect = 4e-19
Identities = 54/158 (34%), Positives = 88/158 (55%), Gaps = 3/158 (1%)
Frame = +1
Query: 187 EDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTAT 366
E+V+ P F +GL + + R I G+ P+ IQ ++I ++ GRDV+ AQ+GTGKTA+
Sbjct: 217 EEVDDRPLFADLGLSEPVQRAITEMGYLHPTPIQAQAIPVVLMGRDVLGCAQTGTGKTAS 276
Query: 367 FSISILQTLD---TTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGE 537
F++ ++ L R + LIL PTRELA Q+ + + G ++ + IGG ++ +
Sbjct: 277 FTLPMMDILSDRRARARMPRSLILEPTRELALQVAENFVKYGQYLKLNHALLIGGESMND 336
Query: 538 DIRKLDYGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVL 651
L G V+ TPGR+ D+ R L ++LV+
Sbjct: 337 QRDVLSKGVDVLIATPGRLIDLFDRGGLLLTDTRILVI 374
>UniRef50_A0UX17 Cluster: DEAD/DEAH box helicase-like; n=5;
Clostridium|Rep: DEAD/DEAH box helicase-like -
Clostridium cellulolyticum H10
Length = 437
Score = 96.7 bits (230), Expect = 4e-19
Identities = 50/149 (33%), Positives = 81/149 (54%), Gaps = 2/149 (1%)
Frame = +1
Query: 211 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 390
F+SM L L+ + P+ IQQ++I +K RDVI + +GTGKT + + +
Sbjct: 5 FESMELEKSLVEALKKESITVPTDIQQKAIPEALKNRDVILHSSTGTGKTLAYLLPLFMK 64
Query: 391 LDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHA--CIGGTNLGEDIRKLDYGQ 564
L +E Q LIL PT ELA Q+ + I L ++ + IG N+ I KL
Sbjct: 65 LSAEKKEMQALILVPTHELAIQVVRQIELLSQNSEIKATSTPIIGDVNIMRQIDKLKLKP 124
Query: 565 HVVSGTPGRVFDMIRRRVLRTRSIKMLVL 651
H++ GTPGR+ ++I++R + +IK +++
Sbjct: 125 HIIVGTPGRILELIQKRKISAHTIKTIII 153
>UniRef50_Q7QQX6 Cluster: GLP_383_7421_6129; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_383_7421_6129 - Giardia lamblia ATCC
50803
Length = 430
Score = 96.7 bits (230), Expect = 4e-19
Identities = 60/161 (37%), Positives = 90/161 (55%), Gaps = 4/161 (2%)
Frame = +1
Query: 181 TSEDVEVIPT-FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGK 357
T++DV+ F S+GL+ ELL G+ GF++ + +Q+ +I I+ RDV+A+A++GTGK
Sbjct: 12 TTDDVKGSGVLFSSLGLKQELLMGLTQEGFQQLTPVQELAIPHILARRDVVARAKNGTGK 71
Query: 358 TATFSISILQTLDTTLRETQVLILSPTRELATQIQKVILALGDFM---NVQCHACIGGTN 528
T +F I ILQ ++ Q L+L TRELA Q KV L M + IGG +
Sbjct: 72 TGSFLIPILQMVNPAKDHIQALVLLHTRELAMQTAKVAKTLSKNMPDVTGRIMCAIGGVS 131
Query: 529 LGEDIRKLDYGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVL 651
+ ED + VV TPGR+ +I +L R ++VL
Sbjct: 132 IAEDRERAREKPLVVLATPGRLQQLIDEEILNFRDCSIVVL 172
>UniRef50_Q0FAJ4 Cluster: Dead-box ATP-dependent RNA helicase; n=6;
Alphaproteobacteria|Rep: Dead-box ATP-dependent RNA
helicase - alpha proteobacterium HTCC2255
Length = 531
Score = 96.3 bits (229), Expect = 6e-19
Identities = 51/152 (33%), Positives = 87/152 (57%), Gaps = 5/152 (3%)
Frame = +1
Query: 211 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 390
F +GL E+++ + G+ P+ IQ ++I ++ +D++ AQ+GTGKTA F++ ++Q
Sbjct: 105 FSKLGLDAEIVKALGFLGYTLPTPIQSQAIPAVLNSKDLVGLAQTGTGKTAAFALPLIQQ 164
Query: 391 LDTTL-----RETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLD 555
L R + +ILSPTRELA QI + ++ G + + IGG + + +R L
Sbjct: 165 LLMNPIAIKGRSARAIILSPTRELALQIHEAFVSFGKRLPLNFTHAIGGAPIRKQMRDLS 224
Query: 556 YGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVL 651
G ++ TPGR+ D++ ++ LR K LVL
Sbjct: 225 KGVDILVATPGRLEDLVDQKGLRLDETKFLVL 256
>UniRef50_P54475 Cluster: Probable ATP-dependent RNA helicase yqfR;
n=12; Bacillaceae|Rep: Probable ATP-dependent RNA
helicase yqfR - Bacillus subtilis
Length = 438
Score = 96.3 bits (229), Expect = 6e-19
Identities = 52/150 (34%), Positives = 85/150 (56%), Gaps = 3/150 (2%)
Frame = +1
Query: 211 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 390
F+ L+ ++ ++ GF +P+ IQ+R I ++K VI Q+Q+GTGKT + + +L
Sbjct: 6 FELYELKPFIIDAVHRLGFYEPTDIQKRLIPAVLKKESVIGQSQTGTGKTHAYLLPLLNK 65
Query: 391 LDTTLRETQVLILSPTRELATQIQKVILAL---GDFMNVQCHACIGGTNLGEDIRKLDYG 561
+D QV+I +PTRELA QI + L + + ++ IGGT+ + I KL
Sbjct: 66 IDPAKDVVQVVITAPTRELANQIYQEALKITQGEEGSQIRSKCFIGGTDKQKSIDKLKIQ 125
Query: 562 QHVVSGTPGRVFDMIRRRVLRTRSIKMLVL 651
H+V GTPGR+ D+I+ + L + LV+
Sbjct: 126 PHLVVGTPGRIADLIKEQALSVHKAESLVI 155
>UniRef50_P42305 Cluster: ATP-dependent RNA helicase dbpA; n=9;
Firmicutes|Rep: ATP-dependent RNA helicase dbpA -
Bacillus subtilis
Length = 479
Score = 96.3 bits (229), Expect = 6e-19
Identities = 47/147 (31%), Positives = 85/147 (57%)
Frame = +1
Query: 211 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 390
F + + ++LR + G+ +P+ +QQ I ++ +D++ ++Q+G+GKTA+F I + +
Sbjct: 4 FKNYQISHDILRALEGLGYTEPTKVQQSVIPAALERKDLVVKSQTGSGKTASFGIPLCEL 63
Query: 391 LDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQHV 570
+ + Q LIL+PTRELA Q+++ I +G F ++ A G ++ + +L H+
Sbjct: 64 ANWDENKPQALILTPTRELAVQVKEDITNIGRFKRIKATAVFGKSSFDKQKAELKQKSHI 123
Query: 571 VSGTPGRVFDMIRRRVLRTRSIKMLVL 651
V GTPGRV D I + L + LV+
Sbjct: 124 VVGTPGRVLDHIEKGTLPLDRLSYLVI 150
>UniRef50_Q64VR8 Cluster: ATP-dependent RNA helicase DeaD; n=14;
Bacteria|Rep: ATP-dependent RNA helicase DeaD -
Bacteroides fragilis
Length = 427
Score = 95.9 bits (228), Expect = 7e-19
Identities = 53/150 (35%), Positives = 86/150 (57%), Gaps = 2/150 (1%)
Frame = +1
Query: 208 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 387
TF+++ L + +L+ + G+ P+ IQ++SI +++G+D++ AQ+GTGKTA FSI ILQ
Sbjct: 2 TFENLNLIEPILKALRQEGYTSPTPIQEQSIPILLQGKDLLGCAQTGTGKTAAFSIPILQ 61
Query: 388 TLDTT--LRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYG 561
L T + + L+L+PTRELA QI + A G + ++ GG L G
Sbjct: 62 KLYKTDHRKGIKALVLTPTRELAIQIGESFEAYGRYTGLKHAVIFGGVGQKPQTDALRSG 121
Query: 562 QHVVSGTPGRVFDMIRRRVLRTRSIKMLVL 651
++ TPGR+ D+I + + S+ VL
Sbjct: 122 IQILVATPGRLLDLISQGFISLSSLDFFVL 151
>UniRef50_Q2BMZ1 Cluster: ATP-dependent RNA helicase; n=1;
Neptuniibacter caesariensis|Rep: ATP-dependent RNA
helicase - Neptuniibacter caesariensis
Length = 417
Score = 95.9 bits (228), Expect = 7e-19
Identities = 53/154 (34%), Positives = 89/154 (57%), Gaps = 6/154 (3%)
Frame = +1
Query: 208 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 387
+F S+GL D + + G+++P+AIQ ++I ++KG D+IA A++G+GKTA F + +L+
Sbjct: 2 SFVSLGLSDFFTSTLSSLGYKEPTAIQDKAIPAVLKGHDLIAAAETGSGKTAGFVLPLLE 61
Query: 388 TLDTTLRE----TQVLILSPTRELATQIQKVILALGDF--MNVQCHACIGGTNLGEDIRK 549
L + T L+L PTRELA Q+ + + + ++ A GG + ++
Sbjct: 62 KLHSIPAPGNNLTHALVLVPTRELAVQVSQSVDRYSENCPRKIRSVAIYGGAAINPQMQS 121
Query: 550 LDYGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVL 651
L G +V TPGR+ D++R+ L R +K LVL
Sbjct: 122 LSKGCDIVVATPGRLLDLMRKNALDLRGLKALVL 155
>UniRef50_Q9UHL0 Cluster: ATP-dependent RNA helicase DDX25; n=111;
Eumetazoa|Rep: ATP-dependent RNA helicase DDX25 - Homo
sapiens (Human)
Length = 483
Score = 95.9 bits (228), Expect = 7e-19
Identities = 59/163 (36%), Positives = 96/163 (58%), Gaps = 5/163 (3%)
Frame = +1
Query: 178 DTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKG---RDVIAQAQSG 348
D S + + TF+ + L++ELL+GIY GF +PS IQ+ + LP++ +++IAQ+QSG
Sbjct: 88 DPSSPLYSVKTFEELRLKEELLKGIYAMGFNRPSKIQEMA-LPMMLAHPPQNLIAQSQSG 146
Query: 349 TGKTATFSISILQTLDTTLRETQVLILSPTRELATQIQKVILALGDF-MNVQCHACIGGT 525
TGKTA F +++L ++ Q L L+PT ELA Q +V+ +G F ++VQ I G
Sbjct: 147 TGKTAAFVLAMLSRVNALELFPQCLCLAPTYELALQTGRVVEQMGKFCVDVQVMYAIRGN 206
Query: 526 NLGEDIRKLDYGQHVVSGTPGRVFD-MIRRRVLRTRSIKMLVL 651
+ R D + ++ GTPG V D + +++ I++ VL
Sbjct: 207 RIP---RGTDITKQIIIGTPGTVLDWCFKLKLIDLTKIRVFVL 246
>UniRef50_Q9RKJ0 Cluster: ATP-dependent RNA helicase; n=2;
Streptomyces|Rep: ATP-dependent RNA helicase -
Streptomyces coelicolor
Length = 740
Score = 95.5 bits (227), Expect = 1e-18
Identities = 50/152 (32%), Positives = 85/152 (55%), Gaps = 3/152 (1%)
Frame = +1
Query: 205 PTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISIL 384
PTF +GL + ++R + G P IQ +I + G+D++ + ++G+GKT +F + L
Sbjct: 61 PTFADLGLPEGVVRKLAQNGVTTPFPIQAATIPDALAGKDILGRGRTGSGKTLSFGLPTL 120
Query: 385 QTLD---TTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLD 555
TL T + + +IL+PTRELA Q+ + GD + ++ GGT++G I L+
Sbjct: 121 ATLAGGRTEKHKPRAVILTPTRELAMQVADALQPYGDVLGLKMKVVCGGTSMGNQIYALE 180
Query: 556 YGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVL 651
G V+ TPGR+ D+I R ++++ VL
Sbjct: 181 RGVDVLVATPGRLRDIINRGACSLENVQIAVL 212
>UniRef50_A0M3C7 Cluster: RhlE-like DEAD box family ATP-dependent
RNA helicase; n=4; Bacteroidetes|Rep: RhlE-like DEAD box
family ATP-dependent RNA helicase - Gramella forsetii
(strain KT0803)
Length = 455
Score = 95.5 bits (227), Expect = 1e-18
Identities = 47/149 (31%), Positives = 85/149 (57%), Gaps = 1/149 (0%)
Frame = +1
Query: 208 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 387
+F + L L + F+ P+ IQ+++ I+ GRDV+ AQ+GTGKT + + +L+
Sbjct: 10 SFQDLNLNTPLRNALEDLNFQTPTPIQEQAFSSIMSGRDVVGIAQTGTGKTFAYLLPLLR 69
Query: 388 TLD-TTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQ 564
L + + ++LI+ PTREL Q+ + I L ++N++ GG N+ + L G
Sbjct: 70 MLKYSEQKNPRILIMVPTRELVVQVVEEIEKLAKYINLRVAGVYGGVNINTQHQDLMQGL 129
Query: 565 HVVSGTPGRVFDMIRRRVLRTRSIKMLVL 651
+V TP R++D++ RR ++ +SI+ V+
Sbjct: 130 DIVVATPRRLYDLVLRRAVQLKSIQKFVI 158
>UniRef50_Q2WF63 Cluster: Putative uncharacterized protein; n=4;
Bilateria|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 561
Score = 95.5 bits (227), Expect = 1e-18
Identities = 56/162 (34%), Positives = 83/162 (51%)
Frame = +1
Query: 121 SEVSSNRKILSEDLSNVEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSI 300
SE + S D + SED F +G+ + + + T + + +Q I
Sbjct: 61 SEGEEGDEFKSSDDTPKPIQISEDNMTTKKFSQLGVCSWITQQLQTMQIKTATPVQAACI 120
Query: 301 LPIVKGRDVIAQAQSGTGKTATFSISILQTLDTTLRETQVLILSPTRELATQIQKVILAL 480
I++G D++ A++GTGKT F+I ILQ L LIL+PTRELA QI + AL
Sbjct: 121 PKILEGSDILGCARTGTGKTLAFAIPILQKLSVDPYGIYALILTPTRELAFQIAEQFTAL 180
Query: 481 GDFMNVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMI 606
G + ++C +GG +L R+L HVV TPGR+ D+I
Sbjct: 181 GKPITLKCSVIVGGRSLIHQARELSERPHVVVATPGRLADLI 222
>UniRef50_A4UCU0 Cluster: DEAD box polypeptide 47 isoform 1 variant;
n=9; Coelomata|Rep: DEAD box polypeptide 47 isoform 1
variant - Homo sapiens (Human)
Length = 182
Score = 95.1 bits (226), Expect = 1e-18
Identities = 54/153 (35%), Positives = 82/153 (53%), Gaps = 1/153 (0%)
Frame = +1
Query: 196 EVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSI 375
E TF +G+ D L G+ KP+ IQ +I ++GRD+I A++G+GKT F++
Sbjct: 10 EETKTFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAFAL 69
Query: 376 SILQTLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLD 555
IL L T + L+L+PTRELA QI + ALG + VQ +GG + L
Sbjct: 70 PILNALLETPQRLFALVLTPTRELAFQISEQFEALGSSIGVQSAVIVGGIDSMSQSLALA 129
Query: 556 YGQHVVSGTPGRVFDMIRR-RVLRTRSIKMLVL 651
H++ TPGR+ D + + R++K LV+
Sbjct: 130 KKPHIIIATPGRLIDHLENTKGFNLRALKYLVM 162
>UniRef50_Q978T9 Cluster: ATP-dependent RNA helicase; n=3;
Thermoplasma|Rep: ATP-dependent RNA helicase -
Thermoplasma volcanium
Length = 373
Score = 95.1 bits (226), Expect = 1e-18
Identities = 49/147 (33%), Positives = 82/147 (55%)
Frame = +1
Query: 211 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 390
F+ LR+EL+ I G+ +P+ +Q +I + G D++ ++++G+GKTA + I I+
Sbjct: 4 FEEFNLRNELIESIRGTGYSEPTEVQSMAIPIALAGSDLVVRSKTGSGKTAAYLIPIINN 63
Query: 391 LDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQHV 570
+ + LIL PTRELA Q+ KV ALG ++ GG ++ + I + G ++
Sbjct: 64 TAKE-KGIRALILLPTRELAVQVAKVSEALGKRSGIRTVVVYGGVSINKQIELILRGANI 122
Query: 571 VSGTPGRVFDMIRRRVLRTRSIKMLVL 651
+ GTPGR D+I R +L + VL
Sbjct: 123 IVGTPGRTLDLIDRGILNFDKVSYFVL 149
>UniRef50_Q9H0S4 Cluster: Probable ATP-dependent RNA helicase DDX47;
n=32; Eukaryota|Rep: Probable ATP-dependent RNA helicase
DDX47 - Homo sapiens (Human)
Length = 455
Score = 95.1 bits (226), Expect = 1e-18
Identities = 54/153 (35%), Positives = 82/153 (53%), Gaps = 1/153 (0%)
Frame = +1
Query: 196 EVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSI 375
E TF +G+ D L G+ KP+ IQ +I ++GRD+I A++G+GKT F++
Sbjct: 21 EETKTFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAFAL 80
Query: 376 SILQTLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLD 555
IL L T + L+L+PTRELA QI + ALG + VQ +GG + L
Sbjct: 81 PILNALLETPQRLFALVLTPTRELAFQISEQFEALGSSIGVQSAVIVGGIDSMSQSLALA 140
Query: 556 YGQHVVSGTPGRVFDMIRR-RVLRTRSIKMLVL 651
H++ TPGR+ D + + R++K LV+
Sbjct: 141 KKPHIIIATPGRLIDHLENTKGFNLRALKYLVM 173
>UniRef50_Q14NT1 Cluster: Putative atp-dependent rna helicase
protein; n=1; Spiroplasma citri|Rep: Putative
atp-dependent rna helicase protein - Spiroplasma citri
Length = 443
Score = 94.7 bits (225), Expect = 2e-18
Identities = 52/148 (35%), Positives = 85/148 (57%), Gaps = 1/148 (0%)
Frame = +1
Query: 211 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 390
F+++ L L R I G+ + IQ+++I + +D+I ++ +GTGKT F + ILQ
Sbjct: 3 FNTLNLYPALQRMIAKMGYTNLTEIQEKAIPVALNSQDIIGKSHTGTGKTVAFIVPILQN 62
Query: 391 LDTTLRETQVLILSPTRELATQIQKVILALGDFM-NVQCHACIGGTNLGEDIRKLDYGQH 567
L+T L++ Q +IL PT ELA+QI + + ++ V GG+++ I L +
Sbjct: 63 LNTHLKQPQAIILCPTHELASQIIEQVRKFATYLEGVNATLICGGSHIQRQIYAL-RKSN 121
Query: 568 VVSGTPGRVFDMIRRRVLRTRSIKMLVL 651
++ GTPGR+ D I R+ LR IK +VL
Sbjct: 122 IIVGTPGRIADHINRKTLRLDKIKTIVL 149
>UniRef50_Q0LVA0 Cluster: Helicase-like:DEAD/DEAH box helicase-like;
n=7; Alphaproteobacteria|Rep: Helicase-like:DEAD/DEAH
box helicase-like - Caulobacter sp. K31
Length = 542
Score = 94.7 bits (225), Expect = 2e-18
Identities = 54/161 (33%), Positives = 83/161 (51%), Gaps = 5/161 (3%)
Frame = +1
Query: 184 SEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTA 363
+ + + F +GL LL+ + G+ P+ IQ ++I ++ GRD++ AQ+GTGKTA
Sbjct: 58 ARETHSLTQFTDLGLAKPLLKALTDKGYTVPTPIQAQAIPLVMSGRDLLGIAQTGTGKTA 117
Query: 364 TFSISILQTL-----DTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTN 528
F++ IL L R + L+LSPTRELATQI + G M + GG
Sbjct: 118 AFALPILHRLAEDKKPAPRRGFRCLVLSPTRELATQIAESFRDYGKHMGLTVATIFGGVK 177
Query: 529 LGEDIRKLDYGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVL 651
G ++ L G VV TPGR+ D + + +++ VL
Sbjct: 178 YGPQMKALAAGVDVVVATPGRLMDHLGEKSAHLNGVEIFVL 218
>UniRef50_A6W6A7 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Kineococcus radiotolerans SRS30216|Rep: DEAD/DEAH
box helicase domain protein - Kineococcus radiotolerans
SRS30216
Length = 590
Score = 94.7 bits (225), Expect = 2e-18
Identities = 55/162 (33%), Positives = 87/162 (53%), Gaps = 6/162 (3%)
Frame = +1
Query: 184 SEDVEVIP-TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKT 360
+E +EV TF +GL +EL+ + G P AIQ R++ + GRD++ +A++G+GKT
Sbjct: 138 AEQIEVAESTFAELGLPEELVAALERRGMTAPFAIQSRTLPDGIAGRDILGRARTGSGKT 197
Query: 361 ATFSISILQTLDTTLRET-----QVLILSPTRELATQIQKVILALGDFMNVQCHACIGGT 525
F + +L L R + L+L PTRELA Q+ + LGD ++++ +GG
Sbjct: 198 LGFGLPMLARLAQQKRPRITGAPRGLVLVPTRELAMQVADALRPLGDSLDLRLSVVVGGV 257
Query: 526 NLGEDIRKLDYGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVL 651
G I L G V+ TPGR+ D+I R + + + VL
Sbjct: 258 PYGRQIAALQRGIDVLIATPGRLVDLIDRDAVSLAEVDVAVL 299
>UniRef50_Q09903 Cluster: ATP-dependent RNA helicase drs1; n=1;
Schizosaccharomyces pombe|Rep: ATP-dependent RNA
helicase drs1 - Schizosaccharomyces pombe (Fission
yeast)
Length = 754
Score = 94.7 bits (225), Expect = 2e-18
Identities = 54/152 (35%), Positives = 85/152 (55%), Gaps = 4/152 (2%)
Frame = +1
Query: 208 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 387
+F SM L +L+G+ GFE P+ IQ ++I + G+D++ A +G+GKTA F + IL+
Sbjct: 260 SFQSMNLSRPILKGLSNLGFEVPTQIQDKTIPLALLGKDIVGAAVTGSGKTAAFIVPILE 319
Query: 388 TL---DTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDY 558
L + T+VLIL PTRELA Q V + F ++ CIGG +L ++L
Sbjct: 320 RLLYRPKKVPTTRVLILCPTRELAMQCHSVATKIASFTDIMVCLCIGGLSLKLQEQELRK 379
Query: 559 GQHVVSGTPGRVFDMIRR-RVLRTRSIKMLVL 651
+V TPGR D +R + +I+++V+
Sbjct: 380 RPDIVIATPGRFIDHMRNSQGFTVENIEIMVM 411
>UniRef50_UPI0001555979 Cluster: PREDICTED: similar to ATP-dependent
RNA helicase; n=1; Ornithorhynchus anatinus|Rep:
PREDICTED: similar to ATP-dependent RNA helicase -
Ornithorhynchus anatinus
Length = 580
Score = 94.3 bits (224), Expect = 2e-18
Identities = 58/172 (33%), Positives = 93/172 (54%), Gaps = 9/172 (5%)
Frame = +1
Query: 160 LSNVEFDTSEDVEVIPT-------FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKG 318
LS+VE DT E V V F SMGL + +G+ G++ P+ IQ+++I I+ G
Sbjct: 128 LSDVEPDTRELVRVQNKKKKKSGGFQSMGLSYPVFKGVMKKGYKVPTPIQRKTIPVILDG 187
Query: 319 RDVIAQAQSGTGKTATFSISILQTLDTTLRE--TQVLILSPTRELATQIQKVILALGDFM 492
+DV+A A++G+GKTA F I + + L + + L+LSPTRELA Q K LG F
Sbjct: 188 KDVVAMARTGSGKTACFLIPMFEKLKAHSAQAGARALVLSPTRELALQTGKFTKELGKFT 247
Query: 493 NVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIRRRVLRTRSIKMLV 648
++ +GG + + L ++ TPGR+ + L+ +S++ +V
Sbjct: 248 GLKMALILGGDRMEDQFAALHENPDIIIATPGRLMHVAVEMNLKLQSVEYVV 299
>UniRef50_Q2YZZ9 Cluster: Putative uncharacterized protein; n=1;
uncultured candidate division OP8 bacterium|Rep:
Putative uncharacterized protein - uncultured candidate
division OP8 bacterium
Length = 453
Score = 94.3 bits (224), Expect = 2e-18
Identities = 54/148 (36%), Positives = 80/148 (54%), Gaps = 1/148 (0%)
Frame = +1
Query: 211 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISIL-Q 387
F S+ L LL+ + GF +P+ IQ +I P + GRDV+A A +G+GKTA F + IL Q
Sbjct: 3 FSSLHLHPTLLKALKELGFPRPTPIQADAIPPAMSGRDVMASAVTGSGKTAAFLLPILHQ 62
Query: 388 TLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQH 567
+D T+ L+++PTRELA QI + + L + A GG ++ G
Sbjct: 63 LIDRPRGTTRALVITPTRELAAQILEDLNDLAVHTPISAAAVFGGVSIRPQEHAFRRGVD 122
Query: 568 VVSGTPGRVFDMIRRRVLRTRSIKMLVL 651
V+ GTPGR+ D R + ++ LVL
Sbjct: 123 VLIGTPGRLLDHFRAPYAKLAGLEHLVL 150
>UniRef50_A0KZD5 Cluster: DEAD/DEAH box helicase domain protein;
n=19; Alteromonadales|Rep: DEAD/DEAH box helicase domain
protein - Shewanella sp. (strain ANA-3)
Length = 487
Score = 94.3 bits (224), Expect = 2e-18
Identities = 50/150 (33%), Positives = 89/150 (59%), Gaps = 3/150 (2%)
Frame = +1
Query: 211 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 390
FD++GL +L I G+ + + +QQ+ I ++G+D++A AQ+GTGKTA+F++ +L+
Sbjct: 24 FDTLGLSSPILNAIAECGYLQLTQVQQQVIPLALEGKDIMACAQTGTGKTASFALPVLEQ 83
Query: 391 LDTTLRE---TQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYG 561
L + + L+++PTRELA Q+ I F+ ++ A GG N+ + ++ G
Sbjct: 84 LSKQPNDKPLLRALVMTPTRELAIQVCANIQKYSQFLPLKTLAVYGGANMNPQRKGVEQG 143
Query: 562 QHVVSGTPGRVFDMIRRRVLRTRSIKMLVL 651
++ TPGR+FD+I + L S+ LV+
Sbjct: 144 VDILVATPGRLFDIIGQFHLDLSSVTTLVI 173
>UniRef50_A0KXT6 Cluster: DEAD/DEAH box helicase domain protein;
n=22; Gammaproteobacteria|Rep: DEAD/DEAH box helicase
domain protein - Shewanella sp. (strain ANA-3)
Length = 491
Score = 94.3 bits (224), Expect = 2e-18
Identities = 51/151 (33%), Positives = 87/151 (57%), Gaps = 4/151 (2%)
Frame = +1
Query: 211 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 390
F +GL L++ + G+ P+ IQ ++I I+ G++V+A AQ+GTGKTA+F + +L
Sbjct: 3 FSQLGLHSALVKAVTELGYTTPTPIQTKAIPSILAGKNVLAAAQTGTGKTASFVLPLLHR 62
Query: 391 LDTT--LRETQV--LILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDY 558
+R +V +IL+PTRELA Q+++ I ++ + A GG + ++L
Sbjct: 63 FADAPKIRPKRVRAIILTPTRELALQVEENINQYAKYLPLTAMAMYGGVDAAPQKKRLIE 122
Query: 559 GQHVVSGTPGRVFDMIRRRVLRTRSIKMLVL 651
G ++ TPGR+ DM +R +R + +LVL
Sbjct: 123 GVDLLVATPGRLLDMYTQRAIRFDEVSVLVL 153
>UniRef50_Q675R0 Cluster: ATP-dependent 61 kDa nucleolar RNA
helicase-like protein; n=1; Oikopleura dioica|Rep:
ATP-dependent 61 kDa nucleolar RNA helicase-like protein
- Oikopleura dioica (Tunicate)
Length = 548
Score = 94.3 bits (224), Expect = 2e-18
Identities = 52/159 (32%), Positives = 94/159 (59%), Gaps = 1/159 (0%)
Frame = +1
Query: 178 DTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGK 357
D E+V+V+ ++S GL +L GI G+++P+ IQ+ + +KG+D++A+A++G+GK
Sbjct: 3 DVEEEVKVVQ-WNSFGLDPRILSGIAALGWKEPTEIQEAGLPIALKGKDILAKARTGSGK 61
Query: 358 TATFSISILQTLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGE 537
T + I I+Q + + T+ LI+ PTREL +QI+ V+ L V+C + LG
Sbjct: 62 TGAYLIPIVQRI-LHIASTRALIIGPTRELCSQIEAVVREL----CVKCLDVVSIYELGS 116
Query: 538 DIR-KLDYGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVL 651
++ + D +V GTPGR+ + ++ L + ++VL
Sbjct: 117 EVETEADISASIVIGTPGRILNALKSERLSLTELSVMVL 155
>UniRef50_Q22MC1 Cluster: Type III restriction enzyme, res subunit
family protein; n=1; Tetrahymena thermophila SB210|Rep:
Type III restriction enzyme, res subunit family protein
- Tetrahymena thermophila SB210
Length = 440
Score = 94.3 bits (224), Expect = 2e-18
Identities = 52/150 (34%), Positives = 86/150 (57%), Gaps = 3/150 (2%)
Frame = +1
Query: 211 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 390
F +GL + + G++ P+ IQ+ +I P+++ + VIA A++G+GKTATF+ ILQ
Sbjct: 4 FAKLGLDSWIQKTCDKVGYQNPTKIQELAIPPLLRKQHVIANAETGSGKTATFAFPILQD 63
Query: 391 LDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQHV 570
L ++L+ RELA QI + G +N++ +GG + + + +L+ H+
Sbjct: 64 LAKDPFGVFAIVLTANRELAMQISEQFTIFGSSLNLRVSTLVGGVDFNKQLSELERIPHI 123
Query: 571 VSGTPGRVFDMI-RRRVLR--TRSIKMLVL 651
V GTPGR DMI + VL+ ++K LVL
Sbjct: 124 VVGTPGRTLDMIDKSPVLKEYIENVKYLVL 153
>UniRef50_A7U5W6 Cluster: DEAD-box helicase 1; n=8;
Aconoidasida|Rep: DEAD-box helicase 1 - Plasmodium
falciparum
Length = 457
Score = 94.3 bits (224), Expect = 2e-18
Identities = 64/170 (37%), Positives = 91/170 (53%), Gaps = 23/170 (13%)
Frame = +1
Query: 211 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 390
F L+ ELLR I GFE PS +QQ +I + G D++ QA+SG GKTA F +SILQ
Sbjct: 57 FKDFFLKPELLRAISESGFEHPSEVQQETIPAAITGTDILCQAKSGMGKTAVFVLSILQQ 116
Query: 391 LDTT----LRET----------------QVLILSPTRELATQIQKVILALGDFM-NVQCH 507
LDT +++T + L L+ TRELA QI+ ++ NV+C
Sbjct: 117 LDTNENQDMQDTKEMNNDNNNNGDNKFVRCLGLAHTRELAYQIKNEFDRFSKYLKNVRCE 176
Query: 508 ACIGGTNLGEDIR--KLDYGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVL 651
GG ++ + I+ K D H++ GTPGR+ +IR + L T I+ VL
Sbjct: 177 VVYGGISMNKHIKLFKEDNIPHIIIGTPGRILALIREKYLITDKIQHFVL 226
>UniRef50_Q5KPU1 Cluster: ATP-dependent RNA helicase DBP8; n=2;
Filobasidiella neoformans|Rep: ATP-dependent RNA
helicase DBP8 - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 619
Score = 94.3 bits (224), Expect = 2e-18
Identities = 43/134 (32%), Positives = 80/134 (59%)
Frame = +1
Query: 208 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 387
TF+S+GL L+ + + +KP+ IQ + PI+ GRD I A++G+GKT F++ I++
Sbjct: 153 TFESLGLSHPLITALASINIKKPTEIQAACVEPILSGRDCIGGAKTGSGKTMAFALPIVE 212
Query: 388 TLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQH 567
+ ++L+PTRELA Q+ + L +G + + +GG ++ + ++L+ H
Sbjct: 213 RIARDPFGVWAVVLTPTRELAYQLSEQFLVIGKPLGLTTATIVGGMDMMKQAQELEARPH 272
Query: 568 VVSGTPGRVFDMIR 609
++ TPGR+ D++R
Sbjct: 273 IIVATPGRLCDLLR 286
>UniRef50_UPI00015BD198 Cluster: UPI00015BD198 related cluster; n=1;
unknown|Rep: UPI00015BD198 UniRef100 entry - unknown
Length = 364
Score = 93.9 bits (223), Expect = 3e-18
Identities = 47/140 (33%), Positives = 86/140 (61%), Gaps = 1/140 (0%)
Frame = +1
Query: 235 ELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQTLDTTLRET 414
EL + + G+++P+ IQ+ +I ++G D++ QA +GTGKT F+I I++ L +
Sbjct: 10 ELQKALEDAGYKEPTPIQRDAIPLALEGYDILGQAATGTGKTGAFAIPIVEKLQKGKPDV 69
Query: 415 QVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKL-DYGQHVVSGTPGR 591
+ L+L+PTRELA Q+++ I L + + + GGT++ +++ L + ++ GTPGR
Sbjct: 70 KALVLTPTRELAIQVKEQIYMLTKYKRLSSYVFYGGTSVKQNLDILQNKNVDILIGTPGR 129
Query: 592 VFDMIRRRVLRTRSIKMLVL 651
+ D+I R+ L ++ LVL
Sbjct: 130 IKDLIDRKALNLSKVEYLVL 149
>UniRef50_Q1VL45 Cluster: DEAD/DEAH box helicase-like protein; n=1;
Psychroflexus torquis ATCC 700755|Rep: DEAD/DEAH box
helicase-like protein - Psychroflexus torquis ATCC
700755
Length = 255
Score = 93.9 bits (223), Expect = 3e-18
Identities = 58/148 (39%), Positives = 82/148 (55%), Gaps = 1/148 (0%)
Frame = +1
Query: 211 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVK-GRDVIAQAQSGTGKTATFSISILQ 387
FDS L D L G+ G+E + +Q R +PI + G DVI QA++G+GKTA F + IL+
Sbjct: 7 FDSWELPDALRTGLAQLGWEFATQVQ-RDTVPIARQGTDVIGQARTGSGKTAAFGLPILE 65
Query: 388 TLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQH 567
+ + Q L+L+PTRELA Q+ + L + GGT+L + + L G
Sbjct: 66 RCQPS-GKLQALVLAPTRELANQVAQEFELLQGNAGLSIVTVYGGTDLEKQAKTLAKGVD 124
Query: 568 VVSGTPGRVFDMIRRRVLRTRSIKMLVL 651
++ GTPGRV DM R + S KML L
Sbjct: 125 IIVGTPGRVMDMNERGHIDLNSPKMLCL 152
>UniRef50_A6NSW7 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 400
Score = 93.9 bits (223), Expect = 3e-18
Identities = 51/156 (32%), Positives = 87/156 (55%), Gaps = 1/156 (0%)
Frame = +1
Query: 187 EDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTAT 366
E V + + +GL E+++ I G+ + + +Q +I ++ +DVIA+A +GTGKT
Sbjct: 6 EQVNEVVNYADLGLSAEVMKAIDKKGYVRATPVQAGAIPYFMEWKDVIAKAPTGTGKTFA 65
Query: 367 FSISILQTLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACI-GGTNLGEDI 543
F I +++ +D Q L+L+PTRELA QIQ + L +F C+ GG + + I
Sbjct: 66 FGIPMVEHIDPESDAVQALVLAPTRELALQIQDELRDLCEFKEGVRSVCLYGGAPIEKQI 125
Query: 544 RKLDYGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVL 651
L +V TPGR+ D ++RR ++ ++ +VL
Sbjct: 126 TTLKKHPQIVVATPGRLMDHMKRRTVKLDKVETVVL 161
>UniRef50_A1USG3 Cluster: DEAD/DEAH box helicase domain/helicase
conserved C-terminal domain protein; n=2;
Rhizobiales|Rep: DEAD/DEAH box helicase domain/helicase
conserved C-terminal domain protein - Bartonella
bacilliformis (strain ATCC 35685 / KC583)
Length = 462
Score = 93.9 bits (223), Expect = 3e-18
Identities = 51/150 (34%), Positives = 84/150 (56%), Gaps = 3/150 (2%)
Frame = +1
Query: 211 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 390
FD++GL ++++ + G+ P+ IQ +I +++ +DV+ AQ+GTGKTA+F + +L
Sbjct: 8 FDNLGLSAKVIKAVQLAGYTAPTPIQSETIPHVLQHKDVLGIAQTGTGKTASFVLPMLTL 67
Query: 391 LD---TTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYG 561
L+ R + LIL PTRELA Q+++ G + IGG + RKL+ G
Sbjct: 68 LEKGRAKARMPRTLILEPTRELAAQVKENFDKYGINHRLNVALLIGGVSFDHQDRKLERG 127
Query: 562 QHVVSGTPGRVFDMIRRRVLRTRSIKMLVL 651
V+ TPGR+ D R L +++LV+
Sbjct: 128 ADVLIATPGRLLDHFERGTLLLMGVEILVI 157
>UniRef50_Q81RE0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=9; Bacillus cereus group|Rep: ATP-dependent
RNA helicase, DEAD/DEAH box family - Bacillus anthracis
Length = 389
Score = 93.5 bits (222), Expect = 4e-18
Identities = 42/129 (32%), Positives = 81/129 (62%)
Frame = +1
Query: 262 GFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQTLDTTLRETQVLILSPTR 441
GF++ + IQ+++I I++G+DVIA++ +GTGKT + + +L ++ +++ QV++L+PTR
Sbjct: 17 GFKELTEIQKQAIPTILEGQDVIAESPTGTGKTLAYLLPLLHKINPEVKQPQVVVLAPTR 76
Query: 442 ELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIRRRVL 621
EL QI + + + + IGG ++ + KL V+ G+PGR+ ++IR + L
Sbjct: 77 ELVMQIHEEVQKFTAGTEISGASLIGGADIKRQVEKLKKHPRVIVGSPGRILELIRMKKL 136
Query: 622 RTRSIKMLV 648
+ +K +V
Sbjct: 137 KMHEVKTIV 145
>UniRef50_A6QHA1 Cluster: ATP-dependent RNA helicase DEAD/DEAH box
family protein; n=16; Staphylococcus|Rep: ATP-dependent
RNA helicase DEAD/DEAH box family protein -
Staphylococcus aureus (strain Newman)
Length = 448
Score = 93.5 bits (222), Expect = 4e-18
Identities = 48/148 (32%), Positives = 82/148 (55%), Gaps = 1/148 (0%)
Frame = +1
Query: 211 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 390
F+ L L+ + FEKP+ IQ R I I+K ++I Q+Q+GTGK+ F + ++Q
Sbjct: 6 FEQFNLESSLIDAVKDLNFEKPTEIQNRIIPRILKRTNLIGQSQTGTGKSHAFLLPLMQL 65
Query: 391 LDTTLRETQVLILSPTRELATQIQKVILALGDF-MNVQCHACIGGTNLGEDIRKLDYGQH 567
+D+ ++E Q ++++PTRELA Q+ L F V IGGT++ +D ++ +
Sbjct: 66 IDSEIKEPQAIVVAPTRELAQQLYDAANHLSQFKAGVSVKVFIGGTDIEKDRQRCNAQPQ 125
Query: 568 VVSGTPGRVFDMIRRRVLRTRSIKMLVL 651
++ GTP R+ D+ + L LV+
Sbjct: 126 LIIGTPTRINDLAKTGHLHVHLASYLVI 153
>UniRef50_Q5CIF9 Cluster: DEAD-box RNA helicase; n=2;
Cryptosporidium|Rep: DEAD-box RNA helicase -
Cryptosporidium hominis
Length = 518
Score = 93.5 bits (222), Expect = 4e-18
Identities = 52/148 (35%), Positives = 86/148 (58%), Gaps = 1/148 (0%)
Frame = +1
Query: 211 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKG-RDVIAQAQSGTGKTATFSISILQ 387
+ + L +LL+GIY GF +PS IQ ++ I+ ++IAQA +G+GKTATF++++L
Sbjct: 114 WSDLNLSPDLLKGIYNKGFNRPSKIQAAALPLILNSPMNLIAQAHNGSGKTATFALAMLG 173
Query: 388 TLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQH 567
+DT + Q + L PTRELA Q Q V+ LG F + + G+ K G
Sbjct: 174 KVDTRIIHPQCMCLCPTRELARQNQDVVNELGKFTGITTWLVVA---QGDKYDK-TIGSQ 229
Query: 568 VVSGTPGRVFDMIRRRVLRTRSIKMLVL 651
++ TPG++ D +++R T +K++V+
Sbjct: 230 IIICTPGKMQDFLKKRSFPTEFMKLMVI 257
>UniRef50_Q17JB5 Cluster: DEAD box ATP-dependent RNA helicase; n=4;
Eukaryota|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 699
Score = 93.5 bits (222), Expect = 4e-18
Identities = 57/152 (37%), Positives = 77/152 (50%), Gaps = 5/152 (3%)
Frame = +1
Query: 211 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ- 387
F+ GL D +L GF KP+AIQ + + + GRD++ AQ+G+GKT + L
Sbjct: 124 FEQGGLPDYILEEANKQGFSKPTAIQAQGMPIALSGRDMVGIAQTGSGKTLAYIAPALVH 183
Query: 388 -TLDTTLRETQ---VLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLD 555
T LR L+L+PTRELA QIQ+V G +N GG G IR L+
Sbjct: 184 ITHQDQLRRGDGPIALVLAPTRELAQQIQQVATDFGQRINANNTCVFGGAPKGPQIRDLE 243
Query: 556 YGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVL 651
G +V TPGR+ D + R + R LVL
Sbjct: 244 RGAEIVIATPGRLIDFLERGITNLRRCTYLVL 275
>UniRef50_Q9P9G7 Cluster: DEAD-box RNA helicase; n=3;
Methanosarcinaceae|Rep: DEAD-box RNA helicase -
Methanococcoides burtonii
Length = 522
Score = 93.5 bits (222), Expect = 4e-18
Identities = 51/148 (34%), Positives = 83/148 (56%)
Frame = +1
Query: 208 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 387
+F +G+ D +LR I FE+P+ IQ+ +I I++G+D+I A +G+GKT F I+Q
Sbjct: 3 SFKKLGIEDAILRSIEDKKFEEPTEIQKMAIPLILEGKDIIGGAATGSGKTLAFGCGIIQ 62
Query: 388 TLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQH 567
++ + L+L+PTRELA Q+Q + ++ GG + IR+L+
Sbjct: 63 KIEKG-NGIRALVLTPTRELAEQVQNSLKEFSRHKQLRVAPIYGGVAINPQIRQLERAD- 120
Query: 568 VVSGTPGRVFDMIRRRVLRTRSIKMLVL 651
VV TPGR+ D I R + +++LVL
Sbjct: 121 VVVATPGRLLDHIERGTIDLGDVEILVL 148
>UniRef50_Q9ZRZ8 Cluster: DEAD-box ATP-dependent RNA helicase 28;
n=5; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 28 - Arabidopsis thaliana (Mouse-ear cress)
Length = 789
Score = 93.5 bits (222), Expect = 4e-18
Identities = 54/137 (39%), Positives = 78/137 (56%), Gaps = 3/137 (2%)
Frame = +1
Query: 208 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 387
TF + L LLR T G++KP+ IQ I + GRD+ A A +G+GKTA F++ L+
Sbjct: 168 TFMELNLSRPLLRACETLGYKKPTPIQAACIPLALTGRDLCASAITGSGKTAAFALPTLE 227
Query: 388 TL---DTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDY 558
L + T+VLIL+PTRELA QI +I L F +++C +GG ++ E L
Sbjct: 228 RLLFRPKRVFATRVLILTPTRELAVQIHSMIQNLAQFTDIKCGLIVGGLSVREQEVVLRS 287
Query: 559 GQHVVSGTPGRVFDMIR 609
+V TPGR+ D +R
Sbjct: 288 MPDIVVATPGRMIDHLR 304
>UniRef50_Q8D6Y8 Cluster: Superfamily II DNA and RNA helicase; n=32;
Gammaproteobacteria|Rep: Superfamily II DNA and RNA
helicase - Vibrio vulnificus
Length = 427
Score = 93.1 bits (221), Expect = 5e-18
Identities = 53/152 (34%), Positives = 83/152 (54%), Gaps = 5/152 (3%)
Frame = +1
Query: 208 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 387
+F S G E+++ + G+EK + IQQ++I +G D+ A AQ+GTGKTA FS+ ++Q
Sbjct: 2 SFASQGFAPEVVKALEECGYEKLTPIQQKAIPVARRGHDIFATAQTGTGKTAAFSLPLIQ 61
Query: 388 TL-----DTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKL 552
L + + + LI +PTRELA QI I A + N+ A GG + R L
Sbjct: 62 QLLESGKSASRKTARALIFAPTRELAEQIADNIKAYTKYTNLSVAAIFGGRKMSSQERML 121
Query: 553 DYGQHVVSGTPGRVFDMIRRRVLRTRSIKMLV 648
+ G ++ TPGR+ + I + +I+ LV
Sbjct: 122 ENGVDILVATPGRLEEHIESGNVSVANIEFLV 153
>UniRef50_Q44NG9 Cluster: Helicase, C-terminal:DEAD/DEAH box
helicase, N-terminal; n=9; Bacteroidetes/Chlorobi
group|Rep: Helicase, C-terminal:DEAD/DEAH box helicase,
N-terminal - Chlorobium limicola DSM 245
Length = 499
Score = 93.1 bits (221), Expect = 5e-18
Identities = 53/152 (34%), Positives = 83/152 (54%), Gaps = 5/152 (3%)
Frame = +1
Query: 211 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 390
F S+ + + +L+ I G++ P+ IQ +I I+ G D++ AQ+GTGKTA F+I +LQ
Sbjct: 84 FRSLAIIEPILQAIEEEGYQTPTPIQAEAIPLILDGNDLLGCAQTGTGKTAAFAIPVLQL 143
Query: 391 LDTT-----LRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLD 555
L+ R+ + LI++PTRELA QI + A G + GG N L
Sbjct: 144 LNAVKTNEKKRKIRSLIITPTRELAIQIGESFKAYGRHTGLTSTVIFGGVNQNPQTASLQ 203
Query: 556 YGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVL 651
G ++ TPGR+ D++ + L R+I+ VL
Sbjct: 204 KGIDILIATPGRLLDLMNQGHLHLRNIEFFVL 235
>UniRef50_A6DIU5 Cluster: Probable ATP dependent RNA helicase; n=1;
Lentisphaera araneosa HTCC2155|Rep: Probable ATP
dependent RNA helicase - Lentisphaera araneosa HTCC2155
Length = 537
Score = 93.1 bits (221), Expect = 5e-18
Identities = 53/148 (35%), Positives = 83/148 (56%), Gaps = 1/148 (0%)
Frame = +1
Query: 211 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIV-KGRDVIAQAQSGTGKTATFSISILQ 387
F ++GL + + + GF++PS IQ+++I ++ + D+I QAQ+GTGKTA F + I+Q
Sbjct: 4 FTALGLEPWITQCLEAKGFKEPSPIQEQAIPVLLSQDHDIIGQAQTGTGKTAAFGLPIVQ 63
Query: 388 TLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQH 567
++ L++ Q LIL PTRELA Q+ + I + + GG + + R L G
Sbjct: 64 KIEPGLKKPQALILCPTRELAIQVNEEIKSFCKGRGITTVTLYGGAPIMDQKRALKKGVD 123
Query: 568 VVSGTPGRVFDMIRRRVLRTRSIKMLVL 651
+V TPGR I L S++ LVL
Sbjct: 124 LVVATPGRCIHFIEDGKLELDSLEYLVL 151
>UniRef50_Q93ZG7 Cluster: DEAD-box ATP-dependent RNA helicase 38;
n=4; core eudicotyledons|Rep: DEAD-box ATP-dependent RNA
helicase 38 - Arabidopsis thaliana (Mouse-ear cress)
Length = 496
Score = 93.1 bits (221), Expect = 5e-18
Identities = 64/190 (33%), Positives = 96/190 (50%), Gaps = 8/190 (4%)
Frame = +1
Query: 103 IRKMTSSEVSSNRKILSE-DLSNVEFDTSEDVEVIPT--FDSMGLRDELLRGIYT-YGFE 270
+ ++ E IL E + SN++ TS D F+ + L EL++G+Y FE
Sbjct: 54 LNSLSIKEEEKPDSILEEPEDSNIKAVTSGDTPYTSASRFEDLNLSPELMKGLYVEMKFE 113
Query: 271 KPSAIQQRSILPIVKG--RDVIAQAQSGTGKTATFSISILQTLDTTLRETQVLILSPTRE 444
KPS IQ S+ I+ + +IAQA +G+GKT F + +L +D TLRE Q L + PTRE
Sbjct: 114 KPSKIQAISLPMIMTPPHKHLIAQAHNGSGKTTCFVLGMLSRVDPTLREPQALCICPTRE 173
Query: 445 LATQIQKVILALGDFMNVQCHACIGGTNLGED--IRKLDYGQHVVSGTPGRVFDMIRRRV 618
LA Q +V+ +G F + + + G R HVV GTPG + + +
Sbjct: 174 LANQNMEVLQKMGKFTGITAELAVPDSTRGAPAATRGAPVSAHVVIGTPGTLKKWMAFKR 233
Query: 619 LRTRSIKMLV 648
L +K+LV
Sbjct: 234 LGLNHLKILV 243
>UniRef50_Q56XG6 Cluster: DEAD-box ATP-dependent RNA helicase 15;
n=27; Eukaryota|Rep: DEAD-box ATP-dependent RNA helicase
15 - Arabidopsis thaliana (Mouse-ear cress)
Length = 427
Score = 93.1 bits (221), Expect = 5e-18
Identities = 54/145 (37%), Positives = 81/145 (55%), Gaps = 3/145 (2%)
Frame = +1
Query: 226 LRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQTLDTTL 405
L+ ELLR I GFE PS +Q I + G DVI QA+SG GKTA F +S LQ ++ +
Sbjct: 53 LKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIEPSP 112
Query: 406 RETQVLILSPTRELATQIQKVILALGDFM-NVQCHACIGGTN--LGEDIRKLDYGQHVVS 576
+ L+L TRELA QI + ++ + + GG N + +D+ K + H+V
Sbjct: 113 GQVSALVLCHTRELAYQICNEFVRFSTYLPDTKVSVFYGGVNIKIHKDLLKNEC-PHIVV 171
Query: 577 GTPGRVFDMIRRRVLRTRSIKMLVL 651
GTPGRV + R + L ++++ +L
Sbjct: 172 GTPGRVLALAREKDLSLKNVRHFIL 196
>UniRef50_Q89M45 Cluster: ATP-dependent RNA helicase; n=29; cellular
organisms|Rep: ATP-dependent RNA helicase -
Bradyrhizobium japonicum
Length = 500
Score = 92.7 bits (220), Expect = 7e-18
Identities = 51/151 (33%), Positives = 84/151 (55%), Gaps = 3/151 (1%)
Frame = +1
Query: 208 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 387
+F ++GL +++L + G+ P+ IQ+++I ++ +DV+ AQ+GTGKTA F + +L
Sbjct: 2 SFSNLGLSEKVLAAVAATGYTTPTPIQEQAIPHVLARKDVLGIAQTGTGKTAAFVLPMLT 61
Query: 388 TLD---TTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDY 558
L+ R + LIL PTRELA Q+++ G + IGG + G+ KL
Sbjct: 62 ILEKGRARARMPRTLILEPTRELAAQVKENFDRYGAGQKLNVALLIGGVSFGDQDAKLTR 121
Query: 559 GQHVVSGTPGRVFDMIRRRVLRTRSIKMLVL 651
G V+ TPGR+ D R L +++LV+
Sbjct: 122 GVDVLIATPGRLLDHTERGGLLLTGVELLVI 152
>UniRef50_Q5FNK0 Cluster: ATP-dependent RNA helicase; n=1;
Gluconobacter oxydans|Rep: ATP-dependent RNA helicase -
Gluconobacter oxydans (Gluconobacter suboxydans)
Length = 393
Score = 92.7 bits (220), Expect = 7e-18
Identities = 51/151 (33%), Positives = 85/151 (56%), Gaps = 2/151 (1%)
Frame = +1
Query: 205 PTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISIL 384
P F+ +GL LL + G ++PS IQ ++I P+++G+DV+ +Q+G+GKTA F + +L
Sbjct: 20 PGFEELGLIAPLLATLAQAGHKRPSLIQTQAIPPLLEGKDVLVGSQTGSGKTAAFVLPML 79
Query: 385 QTLDTT--LRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDY 558
Q L + LIL PTRELA Q V LG ++++ GGT+ + ++ +
Sbjct: 80 QKLTEAGPAPGPRALILEPTRELAAQTAAVCRQLGRRLSLKTRVICGGTSREQQVQSVSD 139
Query: 559 GQHVVSGTPGRVFDMIRRRVLRTRSIKMLVL 651
G ++ T GR+ D++ + L + LVL
Sbjct: 140 GVDIIVATHGRLLDLVMQADLVLEHLTYLVL 170
>UniRef50_Q019E9 Cluster: ATP-dependent RNA helicase; n=2;
Ostreococcus|Rep: ATP-dependent RNA helicase -
Ostreococcus tauri
Length = 683
Score = 92.7 bits (220), Expect = 7e-18
Identities = 50/154 (32%), Positives = 85/154 (55%), Gaps = 8/154 (5%)
Frame = +1
Query: 214 DSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQTL 393
D+ G+ + ++ + G + IQQ + P + G+DV+ +A++GTGKT FS+ +++ L
Sbjct: 28 DNFGMSETTVQALRKRGVDALFPIQQAVLRPAMDGQDVVGRARTGTGKTLAFSLPVIEKL 87
Query: 394 DTT--------LRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRK 549
+ R + ++L+PTRELA Q++ I ++ C GGT +G+ K
Sbjct: 88 LSNGRGSGGRGYRNPKCIVLAPTRELAKQVENEIFITAPTLDTAC--VYGGTPIGQQESK 145
Query: 550 LDYGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVL 651
L G +V GTPGR+ D++ RR L I+ +VL
Sbjct: 146 LRRGVDIVVGTPGRIMDLMNRRALDLSEIEFVVL 179
>UniRef50_A2DH37 Cluster: DEAD/DEAH box helicase family protein;
n=2; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 541
Score = 92.7 bits (220), Expect = 7e-18
Identities = 50/165 (30%), Positives = 88/165 (53%), Gaps = 2/165 (1%)
Frame = +1
Query: 163 SNVEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQ 342
++V+ + + I F G+R+E+LR + G++ P+ +Q+ SI I+ G D+I +Q
Sbjct: 107 ADVKVEAGNHIPPIIDFPGCGIRNEVLRNVAHNGYKVPTPVQRYSIPYILNGEDLIVTSQ 166
Query: 343 SGTGKTATFSISILQTLDTTLR--ETQVLILSPTRELATQIQKVILALGDFMNVQCHACI 516
+G+GKTA F + ++ L T + L PTRELA QI + +++
Sbjct: 167 TGSGKTAAFMLPVITQLIGTCHSPNPSCVALCPTRELAIQIFEETRKFCKGTDLKTTCVF 226
Query: 517 GGTNLGEDIRKLDYGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVL 651
GG + E IR L G +V TPGR+ D++++ + ++ L+L
Sbjct: 227 GGAPITEQIRNLSRGIDIVIATPGRLIDILKQHCITLSEVRFLIL 271
>UniRef50_Q58083 Cluster: Probable ATP-dependent RNA helicase
MJ0669; n=11; cellular organisms|Rep: Probable
ATP-dependent RNA helicase MJ0669 - Methanococcus
jannaschii
Length = 367
Score = 92.7 bits (220), Expect = 7e-18
Identities = 51/149 (34%), Positives = 88/149 (59%), Gaps = 2/149 (1%)
Frame = +1
Query: 211 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRD--VIAQAQSGTGKTATFSISIL 384
F+ + L D +L I GFEKP+ IQ + ++P+ + ++AQA++G+GKTA+F+I ++
Sbjct: 8 FNELNLSDNILNAIRNKGFEKPTDIQMK-VIPLFLNDEYNIVAQARTGSGKTASFAIPLI 66
Query: 385 QTLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQ 564
+ ++ + +IL+PTRELA Q+ I +L N++ GG + I+ L
Sbjct: 67 ELVNEN-NGIEAIILTPTRELAIQVADEIESLKGNKNLKIAKIYGGKAIYPQIKALK-NA 124
Query: 565 HVVSGTPGRVFDMIRRRVLRTRSIKMLVL 651
++V GTPGR+ D I R L +++K +L
Sbjct: 125 NIVVGTPGRILDHINRGTLNLKNVKYFIL 153
>UniRef50_UPI0000E87E35 Cluster: putative ATP-dependent RNA helicase
protein; n=1; Methylophilales bacterium HTCC2181|Rep:
putative ATP-dependent RNA helicase protein -
Methylophilales bacterium HTCC2181
Length = 427
Score = 92.3 bits (219), Expect = 9e-18
Identities = 50/151 (33%), Positives = 84/151 (55%), Gaps = 3/151 (1%)
Frame = +1
Query: 208 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 387
+F + L +L+ I G+++P+ IQ +SI I+ + V+A AQ+GTGKTA F + IL
Sbjct: 2 SFQTFNLDASILKAIQEAGYDQPTPIQTKSIPEIMLNKHVLASAQTGTGKTAAFVLPILD 61
Query: 388 TLDTTLRE---TQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDY 558
L E +VLI+SPTRELATQI I ++ + GG + G R
Sbjct: 62 KLTKNRSEGRGPRVLIVSPTRELATQITDSIKKYSRYLRINSITITGGISYGLQNRMFSK 121
Query: 559 GQHVVSGTPGRVFDMIRRRVLRTRSIKMLVL 651
++ TPGR+ D+ +++ + + +++++L
Sbjct: 122 PIDILVATPGRLLDLYQQKKINFKGLEVMIL 152
>UniRef50_Q9K7L3 Cluster: RNA helicase; n=2; Bacillus|Rep: RNA
helicase - Bacillus halodurans
Length = 389
Score = 92.3 bits (219), Expect = 9e-18
Identities = 48/148 (32%), Positives = 82/148 (55%), Gaps = 1/148 (0%)
Frame = +1
Query: 211 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 390
F + + L + G +P+ IQQ+ I + G+++I +Q+GTGKT + + +L
Sbjct: 4 FQQWPIGEPFLEALTNQGITEPTEIQQQVIPEALDGQNLIVHSQTGTGKTLAYLLPMLTK 63
Query: 391 LDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQ-H 567
+ +TQ LIL+PT+ELA QI +V L ++ IGG N+ + KL + H
Sbjct: 64 TEELPEQTQALILAPTQELAMQIVEVAKQLTATTSITVLPLIGGANIKRQVEKLKKKKPH 123
Query: 568 VVSGTPGRVFDMIRRRVLRTRSIKMLVL 651
V GTPGR+ +++ + L+ +KM+V+
Sbjct: 124 VAVGTPGRILELMEMKKLKVPHVKMIVV 151
>UniRef50_Q6YPL1 Cluster: Superfamily II DNA and RNA helicase; n=3;
Candidatus Phytoplasma|Rep: Superfamily II DNA and RNA
helicase - Onion yellows phytoplasma
Length = 552
Score = 92.3 bits (219), Expect = 9e-18
Identities = 49/148 (33%), Positives = 81/148 (54%), Gaps = 1/148 (0%)
Frame = +1
Query: 211 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 390
F+ + + ++ + + F + IQ I I+KG DVI QAQ+GTGKT F I I++
Sbjct: 5 FEQLPILEQTKKALKELNFIDATPIQALVIPEIIKGHDVIGQAQTGTGKTFAFGIPIIEK 64
Query: 391 LDTTLRETQVLILSPTRELATQIQKVILALGDF-MNVQCHACIGGTNLGEDIRKLDYGQH 567
++ +++TQ LIL PTREL Q+ + + L F ++ GG + + R L+ H
Sbjct: 65 IEPKIQKTQSLILCPTRELTLQVYEELKKLLRFYQEIRIAVVYGGESYTKQFRALEAKPH 124
Query: 568 VVSGTPGRVFDMIRRRVLRTRSIKMLVL 651
++ TPGR D + R + ++K+L L
Sbjct: 125 LIIATPGRAIDHLERGKIDLSALKILTL 152
>UniRef50_A6DHU9 Cluster: DEAD/DEAH box helicase-like protein; n=1;
Lentisphaera araneosa HTCC2155|Rep: DEAD/DEAH box
helicase-like protein - Lentisphaera araneosa HTCC2155
Length = 412
Score = 92.3 bits (219), Expect = 9e-18
Identities = 51/155 (32%), Positives = 88/155 (56%), Gaps = 7/155 (4%)
Frame = +1
Query: 208 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 387
+F+ + D L R + F + + IQ ++I I +G+D++A++Q+GTGKT FS +++
Sbjct: 2 SFEQLNFPDYLSRAVDNLNFSEATDIQAKAIPLIQEGKDLLAESQTGTGKTLAFSFPLIE 61
Query: 388 TLDTTLRETQV-----LILSPTRELATQIQKVILALGDF--MNVQCHACIGGTNLGEDIR 546
++T + + L+L PTRELA Q++K +F ++ IGG N+ IR
Sbjct: 62 RINTLPPKKKKISILGLVLVPTRELALQVEKAFTNYAEFSLRPIKTATLIGGENIDGQIR 121
Query: 547 KLDYGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVL 651
KL G V+ TPGR+ ++I +R ++ML+L
Sbjct: 122 KLRMGLDVLIATPGRIIELINLGEVRLVELEMLIL 156
>UniRef50_A4EAF2 Cluster: Putative uncharacterized protein; n=1;
Collinsella aerofaciens ATCC 25986|Rep: Putative
uncharacterized protein - Collinsella aerofaciens ATCC
25986
Length = 749
Score = 92.3 bits (219), Expect = 9e-18
Identities = 58/176 (32%), Positives = 89/176 (50%), Gaps = 24/176 (13%)
Frame = +1
Query: 196 EVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSI 375
E +P FD +GL DE+LR I G+ P+ +Q SI +++GRD++A AQ+GTGKTA F +
Sbjct: 43 ENLPAFDELGLSDEMLRAIENLGYTAPTPVQAGSIPVVLEGRDLLAAAQTGTGKTAAFLL 102
Query: 376 SILQTLD-----TTLRE-------------------TQVLILSPTRELATQIQKVILALG 483
+ L+ +RE +L+++PTRELA QI +V +
Sbjct: 103 PTMNNLEHIAPPKPVRERGGRNRRRGAKKPEGNGRGPVMLVITPTRELAQQIDEVAGKIA 162
Query: 484 DFMNVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVL 651
D +GG + L YG ++ TPGR+ D+I + +K+LVL
Sbjct: 163 DVTGHVAVTVVGGVSYKPQTAALKYGCDILVATPGRLVDLIEQGACHLDEVKVLVL 218
>UniRef50_Q7QQ49 Cluster: GLP_139_12217_14094; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_139_12217_14094 - Giardia lamblia
ATCC 50803
Length = 625
Score = 92.3 bits (219), Expect = 9e-18
Identities = 51/152 (33%), Positives = 85/152 (55%), Gaps = 4/152 (2%)
Frame = +1
Query: 208 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 387
++ + L +L R + G++ P+ +Q++ I ++ GRD + A +G+GKT F I +L+
Sbjct: 2 SWQGLSLSRQLTRAVLRLGWKFPTTVQEKVIPIVLAGRDALVSAVTGSGKTGAFGIPLLE 61
Query: 388 TLDTTLRETQ---VLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDY 558
+ R+T LILSPTRELA Q V+ L F N + + IGGT+ + +L
Sbjct: 62 RMILRGRDTYGTTALILSPTRELAAQTAAVLQELAYFTNFRVYLLIGGTDTAKQAAQLRT 121
Query: 559 GQHVVSGTPGRVFDMIRRRV-LRTRSIKMLVL 651
++ TPGR+ D++R V +I++LVL
Sbjct: 122 EPDIIVATPGRLIDLVRNTVNFSLDTIEVLVL 153
>UniRef50_Q6A841 Cluster: Putative ATP-dependent RNA helicase; n=1;
Propionibacterium acnes|Rep: Putative ATP-dependent RNA
helicase - Propionibacterium acnes
Length = 561
Score = 91.9 bits (218), Expect = 1e-17
Identities = 57/167 (34%), Positives = 84/167 (50%), Gaps = 10/167 (5%)
Frame = +1
Query: 181 TSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKT 360
T V V +F +G+R+++ + + G P IQ SI V+G D+I QA++GTGKT
Sbjct: 45 TETTVSVPTSFADLGVREDICQALEGVGIVSPFPIQAMSIPIAVEGTDLIGQARTGTGKT 104
Query: 361 ATFSISILQTLD----------TTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHA 510
F I+IL + TT + Q L++ PTRELA Q+ K I +
Sbjct: 105 LAFGITILLRITLPGDEGWEELTTKGKPQALVMCPTRELALQVSKDISTAASVRGARVLT 164
Query: 511 CIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVL 651
GG I L G VV GTPGR+ D+ +R+ L ++++VL
Sbjct: 165 VYGGVGYESQIDALKAGVDVVVGTPGRLLDLSQRKDLDLSHVRIVVL 211
>UniRef50_Q41FS1 Cluster: IMP dehydrogenase/GMP reductase:Helicase,
C-terminal:DEAD/DEAH box helicase, N-terminal; n=1;
Exiguobacterium sibiricum 255-15|Rep: IMP
dehydrogenase/GMP reductase:Helicase,
C-terminal:DEAD/DEAH box helicase, N-terminal -
Exiguobacterium sibiricum 255-15
Length = 450
Score = 91.9 bits (218), Expect = 1e-17
Identities = 48/151 (31%), Positives = 85/151 (56%), Gaps = 4/151 (2%)
Frame = +1
Query: 211 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 390
F L ++ + +KP+ IQ R I +KGRD+I Q+Q+GTGKT +F + I+Q
Sbjct: 4 FSHFDLHPFVVEALEDARIKKPTDIQSRIIPAALKGRDIIGQSQTGTGKTLSFLLPIVQN 63
Query: 391 LDTTLRETQVLILSPTRELATQI----QKVILALGDFMNVQCHACIGGTNLGEDIRKLDY 558
++ L+E Q +I++PTRELA QI + +++ D+ ++ GG + I ++
Sbjct: 64 VNPELQEMQAIIVAPTRELAWQIHEELKSILVKQPDY--IKTSLITGGMDRERQIGRVKV 121
Query: 559 GQHVVSGTPGRVFDMIRRRVLRTRSIKMLVL 651
+V GTPGR+ D+ + + L+ +K ++
Sbjct: 122 SPQIVIGTPGRILDLFKEQALKPHFVKHYII 152
>UniRef50_Q4P3U9 Cluster: ATP-dependent rRNA helicase RRP3; n=20;
Eukaryota|Rep: ATP-dependent rRNA helicase RRP3 -
Ustilago maydis (Smut fungus)
Length = 551
Score = 91.9 bits (218), Expect = 1e-17
Identities = 51/148 (34%), Positives = 82/148 (55%), Gaps = 1/148 (0%)
Frame = +1
Query: 211 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 390
F +G+ +++ GF+ P+ IQ ++I ++ RDVI AQ+G+GKTA F+I ILQ
Sbjct: 106 FSDLGVIPQIVEACTNMGFKHPTPIQVKAIPEALQARDVIGLAQTGSGKTAAFTIPILQA 165
Query: 391 LDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQHV 570
L + +L+PTRELA QI + + ALG + V+ +GG ++ L HV
Sbjct: 166 LWDNPKPFFACVLAPTRELAYQISQQVEALGSTIGVRSATIVGGMDMMSQSIALSKRPHV 225
Query: 571 VSGTPGRVFDMIRR-RVLRTRSIKMLVL 651
+ TPGR+ D + + R ++ LV+
Sbjct: 226 IVATPGRLQDHLENTKGFSLRGLQYLVM 253
>UniRef50_A3BT52 Cluster: DEAD-box ATP-dependent RNA helicase 29;
n=3; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 29 - Oryza sativa subsp. japonica (Rice)
Length = 851
Score = 91.9 bits (218), Expect = 1e-17
Identities = 51/149 (34%), Positives = 85/149 (57%), Gaps = 3/149 (2%)
Frame = +1
Query: 211 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 390
F+SMGL +E+ RG+ G+ P+ IQ++++ I+ G D+ A A++G+GKTA F + ++Q
Sbjct: 51 FESMGLCEEVYRGVRHKGYRVPTPIQRKAMPLILAGHDIAAMARTGSGKTAAFLVPMIQR 110
Query: 391 L--DTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQ 564
L + LILSPTR+LATQ K LG F +++ +GG ++ +L
Sbjct: 111 LRRHDAGAGIRALILSPTRDLATQTLKFAQQLGKFTDLKISLIVGGDSMESQFEELAENP 170
Query: 565 HVVSGTPGR-VFDMIRRRVLRTRSIKMLV 648
++ TPGR V + L R+++ +V
Sbjct: 171 DIIIATPGRLVHHLAEVEDLNLRTVEYVV 199
>UniRef50_UPI0000499D6F Cluster: DEAD/DEAH box helicase; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: DEAD/DEAH box
helicase - Entamoeba histolytica HM-1:IMSS
Length = 585
Score = 91.5 bits (217), Expect = 2e-17
Identities = 62/184 (33%), Positives = 101/184 (54%), Gaps = 9/184 (4%)
Frame = +1
Query: 97 N*IRKMTSSEVSSNR-KILSEDLSNVEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGFEK 273
N I+ ++++ N +I+ E+L N+ + +E ++ + +D M + D+LL I +E
Sbjct: 141 NKIKTKPLNQMNENDWRIIRENL-NIFVNNNEVIKPLRKWDDMNVCDDLLLLIKNI-YEN 198
Query: 274 PSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ--------TLDTTLRETQVLIL 429
P+ IQ SI +K RD+IA A++GTGKT + I ++Q T +T+ L+L
Sbjct: 199 PTPIQCASIPIALKMRDLIALAETGTGKTFAYLIPLIQFVLKLPKLTEETSASGPYALVL 258
Query: 430 SPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIR 609
+PTRELA QIQK L L ++ CIGG + I +L G +V PGR+ D++
Sbjct: 259 APTRELALQIQKETLKLATPFGLRVCCCIGGEPMQPQIEELSNGAEIVVAAPGRLKDLLN 318
Query: 610 RRVL 621
+ L
Sbjct: 319 QSYL 322
>UniRef50_Q5FS73 Cluster: ATP-dependent RNA helicase; n=2;
Gluconobacter oxydans|Rep: ATP-dependent RNA helicase -
Gluconobacter oxydans (Gluconobacter suboxydans)
Length = 432
Score = 91.5 bits (217), Expect = 2e-17
Identities = 51/152 (33%), Positives = 84/152 (55%), Gaps = 5/152 (3%)
Frame = +1
Query: 211 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 390
F + L LLR + G+ KP+ IQ +SI +++GRD++ AQ+GTGKTA+F++ +L
Sbjct: 9 FADLALAPTLLRALDEAGYVKPTPIQAQSIPLLLEGRDLLGLAQTGTGKTASFALPLLHR 68
Query: 391 LDTTLRE-----TQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLD 555
L T R +VL+L+PTREL +QI + V+ GG + ++ L+
Sbjct: 69 LAATPRPAPKNGARVLVLAPTRELVSQIADGFESFSRHQPVRVTTIFGGVSQVHQVKALE 128
Query: 556 YGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVL 651
G ++ PGR+ D+I + + ++ LVL
Sbjct: 129 EGVDIIVAAPGRLLDLIEQGLCDLSQLETLVL 160
>UniRef50_A7HG33 Cluster: DEAD/DEAH box helicase domain protein;
n=5; Cystobacterineae|Rep: DEAD/DEAH box helicase domain
protein - Anaeromyxobacter sp. Fw109-5
Length = 455
Score = 91.5 bits (217), Expect = 2e-17
Identities = 53/148 (35%), Positives = 79/148 (53%)
Frame = +1
Query: 208 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 387
+F + L E L + GFE P+ IQ ++I P + G+DVI A +GTGKTA F + ++
Sbjct: 5 SFAELHLSPEALAALRRAGFEHPTPIQAQAIPPALAGKDVIGTAATGTGKTAAFLLPLID 64
Query: 388 TLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQH 567
L T+ L+L+PTRELA QI + + G V+ IGG + + L +
Sbjct: 65 RL-AGKPGTRALVLAPTRELALQIGEELERFGHARRVRGAVIIGGVGMAQQAEALRQKRE 123
Query: 568 VVSGTPGRVFDMIRRRVLRTRSIKMLVL 651
+V TPGR+ D + + R I+ LVL
Sbjct: 124 IVIATPGRLVDHLEQGNARLDGIEALVL 151
>UniRef50_Q5CHB7 Cluster: Putative uncharacterized protein; n=2;
Cryptosporidium|Rep: Putative uncharacterized protein -
Cryptosporidium hominis
Length = 868
Score = 91.5 bits (217), Expect = 2e-17
Identities = 52/151 (34%), Positives = 83/151 (54%), Gaps = 3/151 (1%)
Frame = +1
Query: 208 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 387
TF S G +LL I G+ P+ IQ++ I+ GRDV+A A++G+GKTA F + +++
Sbjct: 5 TFQSFGFSPKLLESIKIIGYSLPTPIQRKCFPSILAGRDVVAMARTGSGKTAGFVLPMIE 64
Query: 388 TLDTTLRE---TQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDY 558
L + + + ++LSPTRELA Q +V+ L N+ A GG++L L
Sbjct: 65 RLGCSHSQIVGIRGVVLSPTRELALQTYRVVRKLACKTNLVVCALTGGSSLDRQFESLSG 124
Query: 559 GQHVVSGTPGRVFDMIRRRVLRTRSIKMLVL 651
+V TPGR+F I L ++K+++L
Sbjct: 125 NPDIVVATPGRLFHHIIEAGLSLIAVKIIIL 155
>UniRef50_Q5BXU1 Cluster: SJCHGC08663 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC08663 protein - Schistosoma
japonicum (Blood fluke)
Length = 193
Score = 91.5 bits (217), Expect = 2e-17
Identities = 50/140 (35%), Positives = 81/140 (57%), Gaps = 2/140 (1%)
Frame = +1
Query: 79 FKNLEAN*IRKMTSSEVSSNRKILSEDLSNVEFDTSEDVEVIPTFDSMGLRDELLRGIYT 258
F E + I K+ +S++ + D + D + + TF + L++ LL+GI
Sbjct: 37 FTRAEISYINKLLNSKLFETHDL---DFEVLRSDPDHPLHSVRTFQELNLKEPLLKGIAA 93
Query: 259 YGFEKPSAIQQRSILPIVKG--RDVIAQAQSGTGKTATFSISILQTLDTTLRETQVLILS 432
GF KPS IQ+R++ ++ +++IAQ+QSGTGKTATF +++L + T + Q L ++
Sbjct: 94 MGFYKPSTIQERALSSLISDNPQNMIAQSQSGTGKTATFLLAMLSRIRTDVHYCQCLCMA 153
Query: 433 PTRELATQIQKVILALGDFM 492
PTRELA QI+ V + FM
Sbjct: 154 PTRELALQIESVGRQMAQFM 173
>UniRef50_A0CZH3 Cluster: Chromosome undetermined scaffold_32, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_32,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 431
Score = 91.5 bits (217), Expect = 2e-17
Identities = 47/132 (35%), Positives = 78/132 (59%)
Frame = +1
Query: 211 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 390
F+ +GL LL+ + +++P IQ SI P+++G++V+ +Q+G+GKTA FS ILQT
Sbjct: 9 FEELGLDQWLLKLCWKIDYKEPRPIQVLSIPPLLQGKNVLISSQTGSGKTAAFSFPILQT 68
Query: 391 LDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQHV 570
L +IL+ RELA QI + I G +N++ IGG + + ++ L H+
Sbjct: 69 LSQDPYGIFAIILTANRELAVQIAEQIQIFGASVNLRLALLIGGLSSSKQVKLLGQIPHI 128
Query: 571 VSGTPGRVFDMI 606
+ GTPGR +++
Sbjct: 129 IVGTPGRCAELL 140
>UniRef50_UPI0000DB7667 Cluster: PREDICTED: similar to CG32344-PA;
n=1; Apis mellifera|Rep: PREDICTED: similar to
CG32344-PA - Apis mellifera
Length = 743
Score = 91.1 bits (216), Expect = 2e-17
Identities = 51/148 (34%), Positives = 82/148 (55%), Gaps = 2/148 (1%)
Frame = +1
Query: 211 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 390
F SM L +L+GI G++ P+ IQ+++I ++GRD++A A++G+GKTA F I + +
Sbjct: 38 FQSMALSFPILKGILKRGYKIPTPIQRKTIPLALEGRDIVAMARTGSGKTACFLIPLFEK 97
Query: 391 LDTTLRE--TQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQ 564
L + + LILSPTRELA Q K I LG F ++ +GG N+ +
Sbjct: 98 LKIRQAKVGARALILSPTRELALQTLKFIKELGRFTGLKATIILGGDNMENQFSAIHGNP 157
Query: 565 HVVSGTPGRVFDMIRRRVLRTRSIKMLV 648
++ TPGR + L+ +I+ +V
Sbjct: 158 DILIATPGRFLHICIEMDLQLNNIEYVV 185
>UniRef50_Q5QWG1 Cluster: ATP-dependent RNA helicase; n=1;
Idiomarina loihiensis|Rep: ATP-dependent RNA helicase -
Idiomarina loihiensis
Length = 474
Score = 91.1 bits (216), Expect = 2e-17
Identities = 50/163 (30%), Positives = 85/163 (52%), Gaps = 1/163 (0%)
Frame = +1
Query: 166 NVEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQS 345
N+ +TSE + F+ + L LL + G+++ + +Q S+ I+ D + +A +
Sbjct: 8 NISDNTSETSPELLHFNQLNLPPALLTRLDEIGYQQMTPVQSLSLPVILNNTDAVVRADT 67
Query: 346 GTGKTATFSISILQTLDTTLRETQVLILSPTRELATQIQKVILALG-DFMNVQCHACIGG 522
G+GKT F++++L L+ Q L+L PTRELA Q+ + L +N++ GG
Sbjct: 68 GSGKTTAFALTLLAKLEAKSFSPQALVLCPTRELAHQVADEVRKLAKSMLNIKILTLCGG 127
Query: 523 TNLGEDIRKLDYGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVL 651
L++G HV+ GTPGRV D + +R + + LVL
Sbjct: 128 EPSRIQTNSLEHGAHVLVGTPGRVLDHLEQRNVDLSMLTTLVL 170
>UniRef50_Q0C4R1 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=1; Hyphomonas neptunium ATCC 15444|Rep:
ATP-dependent RNA helicase, DEAD/DEAH box family -
Hyphomonas neptunium (strain ATCC 15444)
Length = 708
Score = 91.1 bits (216), Expect = 2e-17
Identities = 51/145 (35%), Positives = 82/145 (56%), Gaps = 7/145 (4%)
Frame = +1
Query: 238 LLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQTL----DTTL 405
L I+ G+E + +Q + P ++GRD++ A++G+GKT F ++I L DT L
Sbjct: 11 LRAAIHERGYETLTEVQAAATAPELEGRDLLVSARTGSGKTVAFGLAIANELLGGEDTFL 70
Query: 406 RETQV---LILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQHVVS 576
LI++PTRELA Q+ + + L N + C+GG ++ ++ R L+ G H+V
Sbjct: 71 IRAATPLGLIIAPTRELALQVARELRWLYANTNAEIATCVGGMDMRDERRALERGAHIVV 130
Query: 577 GTPGRVFDMIRRRVLRTRSIKMLVL 651
GTPGR+ D I R T +I+ +VL
Sbjct: 131 GTPGRLVDHINRGSFDTSAIRAVVL 155
>UniRef50_P75172 Cluster: Probable ATP-dependent RNA helicase MG425
homolog; n=4; Mycoplasma|Rep: Probable ATP-dependent RNA
helicase MG425 homolog - Mycoplasma pneumoniae
Length = 450
Score = 91.1 bits (216), Expect = 2e-17
Identities = 45/150 (30%), Positives = 88/150 (58%), Gaps = 2/150 (1%)
Frame = +1
Query: 208 TFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 387
TF+ +G+ L+ + +P+ IQQ +I ++ +++I + +GTGKTA F I +++
Sbjct: 4 TFNELGVSPALIATLKDNNINQPTTIQQLAIPQFLQHQNLIVHSPTGTGKTAVFGIPVIE 63
Query: 388 TL--DTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYG 561
TL + TQ L+++PTRELA QI+ + +++ + IGG + + +++L+
Sbjct: 64 TLLKKPSKGTTQTLVVAPTRELAEQIKTTFINFAKHTHLKVVSLIGGIPIWQQLKQLENQ 123
Query: 562 QHVVSGTPGRVFDMIRRRVLRTRSIKMLVL 651
+V GT GRV D++ R V++ ++ L++
Sbjct: 124 PEIVVGTMGRVMDLLERGVIKFEHLEHLII 153
>UniRef50_P32892 Cluster: ATP-dependent RNA helicase DRS1; n=13;
Saccharomycetales|Rep: ATP-dependent RNA helicase DRS1 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 752
Score = 91.1 bits (216), Expect = 2e-17
Identities = 54/157 (34%), Positives = 88/157 (56%), Gaps = 5/157 (3%)
Frame = +1
Query: 196 EVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSI 375
++ F+S+ L +L+G+ + G+ KPS IQ +I + G+D+IA A +G+GKTA F I
Sbjct: 228 QMYENFNSLSLSRPVLKGLASLGYVKPSPIQSATIPIALLGKDIIAGAVTGSGKTAAFMI 287
Query: 376 SILQTL---DTTLRETQVLILSPTRELATQIQKVILALGDFMN-VQCHACIGGTNLGEDI 543
I++ L + T+V++L PTRELA Q+ V + F++ + +GG NL +
Sbjct: 288 PIIERLLYKPAKIASTRVIVLLPTRELAIQVADVGKQIARFVSGITFGLAVGGLNLRQQE 347
Query: 544 RKLDYGQHVVSGTPGRVFDMIRRRV-LRTRSIKMLVL 651
+ L +V TPGR D IR S+++LV+
Sbjct: 348 QMLKSRPDIVIATPGRFIDHIRNSASFNVDSVEILVM 384
>UniRef50_UPI00015B61D8 Cluster: PREDICTED: similar to vasa-like
protein; n=1; Nasonia vitripennis|Rep: PREDICTED:
similar to vasa-like protein - Nasonia vitripennis
Length = 732
Score = 90.6 bits (215), Expect = 3e-17
Identities = 61/175 (34%), Positives = 94/175 (53%), Gaps = 13/175 (7%)
Frame = +1
Query: 166 NVEFDTS-EDVEV-IPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQA 339
++E TS EDV I +FD LR L I G+ KP+ +Q+ I ++ GRD++A A
Sbjct: 287 SIEVKTSGEDVPPPISSFDEANLRVLLNTNIKKSGYTKPTPVQKYGIPILLSGRDLMACA 346
Query: 340 QSGTGKTATFSISILQTL---DTTLR--------ETQVLILSPTRELATQIQKVILALGD 486
Q+G+GKTA F I I+ TL D L E + LI+SPTREL QI
Sbjct: 347 QTGSGKTAAFLIPIIHTLLAKDRDLSDMSSANQVEPRALIISPTRELTIQIFDEARKFSK 406
Query: 487 FMNVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVL 651
++CH GGT+ ++++ G ++ TPGR+ D++ + + +I+ +VL
Sbjct: 407 DSVLKCHIIYGGTSTSHQMKQIFQGVDILVATPGRLLDLVGKGKITFDAIEFVVL 461
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 617,149,926
Number of Sequences: 1657284
Number of extensions: 12056465
Number of successful extensions: 37933
Number of sequences better than 10.0: 500
Number of HSP's better than 10.0 without gapping: 35438
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36883
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 48760335122
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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