Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc12f18
(652 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical... 293 9e-80
AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical ... 292 1e-79
Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein ( C.ele... 194 3e-50
U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation fact... 194 3e-50
AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved ger... 114 4e-26
U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical p... 100 2e-21
AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical ... 97 7e-21
AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical ... 97 7e-21
Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical pr... 95 3e-20
AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical ... 95 3e-20
AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical ... 95 3e-20
Z54327-7|CAD57690.1| 268|Caenorhabditis elegans Hypothetical pr... 91 8e-19
Z54327-6|CAA91120.1| 425|Caenorhabditis elegans Hypothetical pr... 91 8e-19
U08102-1|AAB65852.1| 417|Caenorhabditis elegans putative RNA he... 91 8e-19
AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical... 90 1e-18
Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical pr... 88 4e-18
Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical pr... 88 4e-18
Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical pr... 88 4e-18
EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein. 87 1e-17
CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical ... 87 1e-17
AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical ... 85 3e-17
U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical pr... 82 3e-16
AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and bel... 81 5e-16
AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and bel... 81 5e-16
AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and bel... 81 5e-16
AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical ... 80 2e-15
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 76 2e-14
AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical... 75 6e-14
AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical ... 75 6e-14
AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical ... 70 1e-12
AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical ... 69 3e-12
AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical ... 69 4e-12
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 63 1e-10
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 63 1e-10
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 63 1e-10
U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. 62 3e-10
U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GL... 62 3e-10
AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 62 3e-10
AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA ... 62 4e-10
AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line hel... 62 4e-10
U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical pr... 61 6e-10
Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical pr... 60 1e-09
Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical pr... 60 2e-09
Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical pr... 59 2e-09
AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA ... 57 9e-09
AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line hel... 57 9e-09
U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical pr... 56 2e-08
AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical... 56 2e-08
Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical pr... 48 6e-06
L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical pr... 36 0.019
AL110485-3|CAB60351.1| 2145|Caenorhabditis elegans Hypothetical ... 35 0.044
AF025451-4|AAL16306.1| 567|Caenorhabditis elegans Hypothetical ... 34 0.10
U53141-4|AAA96106.1| 528|Caenorhabditis elegans Mutator protein... 33 0.18
AF003740-7|AAC48142.2| 625|Caenorhabditis elegans Hypothetical ... 33 0.23
U64840-7|AAB04965.1| 340|Caenorhabditis elegans Hypothetical pr... 32 0.41
AF125963-6|AAK95885.1| 520|Caenorhabditis elegans Hypothetical ... 31 0.71
AL034489-9|CAI79279.1| 162|Caenorhabditis elegans Hypothetical ... 31 0.94
>AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical
protein F33D11.10 protein.
Length = 399
Score = 293 bits (718), Expect = 9e-80
Identities = 138/173 (79%), Positives = 158/173 (91%)
Frame = +1
Query: 133 SNRKILSEDLSNVEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIV 312
+ +K +D++ VEF++SE+V VIPTFD MGLR++LLRGIY YGFEKPSAIQQR++ I+
Sbjct: 2 AGKKAEKDDMATVEFESSEEVNVIPTFDKMGLREDLLRGIYAYGFEKPSAIQQRAVPAIL 61
Query: 313 KGRDVIAQAQSGTGKTATFSISILQTLDTTLRETQVLILSPTRELATQIQKVILALGDFM 492
K RDVIAQAQSGTGKTATFSIS+LQ+LDT +RETQ LILSPTRELA QIQKV+LALGD+M
Sbjct: 62 KARDVIAQAQSGTGKTATFSISVLQSLDTQVRETQALILSPTRELAVQIQKVVLALGDYM 121
Query: 493 NVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVL 651
NVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIRRR LRTR+IK+LVL
Sbjct: 122 NVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIRRRNLRTRAIKLLVL 174
>AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical
protein Y65B4A.6 protein.
Length = 399
Score = 292 bits (717), Expect = 1e-79
Identities = 139/175 (79%), Positives = 161/175 (92%)
Frame = +1
Query: 127 VSSNRKILSEDLSNVEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILP 306
++ N+K ++D++ VEF++SE+V +IPTFD MGLR++LLRGIY YGFEKPSAIQQR+I
Sbjct: 1 MAENKK-KNDDMATVEFESSEEVSIIPTFDKMGLREDLLRGIYAYGFEKPSAIQQRAIPA 59
Query: 307 IVKGRDVIAQAQSGTGKTATFSISILQTLDTTLRETQVLILSPTRELATQIQKVILALGD 486
I+K RDVIAQAQSGTGKTATFSIS+LQ+LDT +RETQ LILSPTRELA QIQKV+LALGD
Sbjct: 60 ILKARDVIAQAQSGTGKTATFSISVLQSLDTQVRETQALILSPTRELAVQIQKVVLALGD 119
Query: 487 FMNVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVL 651
+MNVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIRRR LRTR+IK+LVL
Sbjct: 120 YMNVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIRRRNLRTRAIKLLVL 174
>Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein (
C.elegans mRNA for eIF-4A homologue. ).
Length = 402
Score = 194 bits (474), Expect = 3e-50
Identities = 95/152 (62%), Positives = 118/152 (77%)
Frame = +1
Query: 196 EVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSI 375
+V+ +FD M L++ELLRGIY +GFEKPSAIQ+R+I+P G+DVIAQAQSGTGKTATFS+
Sbjct: 26 QVVESFDDMELKEELLRGIYGFGFEKPSAIQKRAIVPCTTGKDVIAQAQSGTGKTATFSV 85
Query: 376 SILQTLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLD 555
SILQ +D Q L+++PTRELA QIQKV+ ALG+++NV CIGGT++ +D RKL+
Sbjct: 86 SILQRIDHEDPHVQALVMAPTRELAQQIQKVMSALGEYLNVNILPCIGGTSVRDDQRKLE 145
Query: 556 YGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVL 651
G HVV GTPGRV DMI R L T IKM VL
Sbjct: 146 AGIHVVVGTPGRVGDMINRNALDTSRIKMFVL 177
>U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation factor
protein 1, isoforma protein.
Length = 402
Score = 194 bits (474), Expect = 3e-50
Identities = 95/152 (62%), Positives = 118/152 (77%)
Frame = +1
Query: 196 EVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSI 375
+V+ +FD M L++ELLRGIY +GFEKPSAIQ+R+I+P G+DVIAQAQSGTGKTATFS+
Sbjct: 26 QVVESFDDMELKEELLRGIYGFGFEKPSAIQKRAIVPCTTGKDVIAQAQSGTGKTATFSV 85
Query: 376 SILQTLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLD 555
SILQ +D Q L+++PTRELA QIQKV+ ALG+++NV CIGGT++ +D RKL+
Sbjct: 86 SILQRIDHEDPHVQALVMAPTRELAQQIQKVMSALGEYLNVNILPCIGGTSVRDDQRKLE 145
Query: 556 YGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVL 651
G HVV GTPGRV DMI R L T IKM VL
Sbjct: 146 AGIHVVVGTPGRVGDMINRNALDTSRIKMFVL 177
>AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved
germline helicase protein1 protein.
Length = 430
Score = 114 bits (275), Expect = 4e-26
Identities = 54/147 (36%), Positives = 91/147 (61%)
Frame = +1
Query: 211 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 390
F+ L +LL GI+ G+EKPS IQ+ SI + G+D++A+A++GTGKT + I +++
Sbjct: 45 FEDFCLGRDLLMGIFEKGWEKPSPIQEASIGVALTGQDILARAKNGTGKTGAYCIPVIEK 104
Query: 391 LDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQHV 570
+ L+ Q +++ PTRELA Q ++ + L + ++ GGT+L +DI +L+ H+
Sbjct: 105 IQPALKAIQAMVIVPTRELALQTSQICVELSKHIQLKVMVTTGGTDLRDDIMRLNGTVHL 164
Query: 571 VSGTPGRVFDMIRRRVLRTRSIKMLVL 651
V TPGR+ D++ + V + K LVL
Sbjct: 165 VIATPGRILDLMEKGVAKMEHCKTLVL 191
>U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical
protein F57B9.3 protein.
Length = 363
Score = 99.5 bits (237), Expect = 2e-21
Identities = 59/144 (40%), Positives = 83/144 (57%)
Frame = +1
Query: 220 MGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQTLDT 399
M L++ELLRGIY +GFEKPSAIQ+ ++ P G+DV Q+Q+G+GKT I ILQ +D
Sbjct: 1 MELKEELLRGIYGFGFEKPSAIQKSAVAPCTTGKDVTIQSQAGSGKTVISLIDILQGIDC 60
Query: 400 TLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQHVVSG 579
QV++L+P R +A + + + +LG +NV C+G E+ D HV+ G
Sbjct: 61 EDAHLQVILLAPQRGMAQRAHEQLKSLGRNLNVNA-TCLGFDTTAEN----DKISHVLMG 115
Query: 580 TPGRVFDMIRRRVLRTRSIKMLVL 651
TP D + T IKM VL
Sbjct: 116 TPK---DFLSNIPSDTSRIKMFVL 136
>AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical
protein Y94H6A.5a protein.
Length = 825
Score = 97.5 bits (232), Expect = 7e-21
Identities = 55/168 (32%), Positives = 94/168 (55%), Gaps = 3/168 (1%)
Frame = +1
Query: 154 EDLSNVEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIA 333
ED + ++ + + + + +GL + + I GF +P+ IQ+++I I+ G+DV+A
Sbjct: 7 EDFTQLQINQNRKHKKAGGWQQIGLDHSVYKAIEKKGFNQPTPIQRKTIPCIMDGKDVVA 66
Query: 334 QAQSGTGKTATFSISILQTL---DTTLRETQVLILSPTRELATQIQKVILALGDFMNVQC 504
+++G+GKTA F I +LQ L DTT + L++SPTRELA Q KV+ LG F ++C
Sbjct: 67 MSRTGSGKTAAFVIPMLQKLKRRDTT--GIRALMVSPTRELALQTFKVVKELGRFTGLRC 124
Query: 505 HACIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIRRRVLRTRSIKMLV 648
+GG + E + ++ TPGR+ +I LR ++ +V
Sbjct: 125 ACLVGGDQIEEQFSTIHENPDILLATPGRLLHVIVEMDLRLSYVQYVV 172
>AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical
protein Y94H6A.5b protein.
Length = 871
Score = 97.5 bits (232), Expect = 7e-21
Identities = 55/168 (32%), Positives = 94/168 (55%), Gaps = 3/168 (1%)
Frame = +1
Query: 154 EDLSNVEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIA 333
ED + ++ + + + + +GL + + I GF +P+ IQ+++I I+ G+DV+A
Sbjct: 7 EDFTQLQINQNRKHKKAGGWQQIGLDHSVYKAIEKKGFNQPTPIQRKTIPCIMDGKDVVA 66
Query: 334 QAQSGTGKTATFSISILQTL---DTTLRETQVLILSPTRELATQIQKVILALGDFMNVQC 504
+++G+GKTA F I +LQ L DTT + L++SPTRELA Q KV+ LG F ++C
Sbjct: 67 MSRTGSGKTAAFVIPMLQKLKRRDTT--GIRALMVSPTRELALQTFKVVKELGRFTGLRC 124
Query: 505 HACIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIRRRVLRTRSIKMLV 648
+GG + E + ++ TPGR+ +I LR ++ +V
Sbjct: 125 ACLVGGDQIEEQFSTIHENPDILLATPGRLLHVIVEMDLRLSYVQYVV 172
>Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical
protein T26G10.1 protein.
Length = 489
Score = 95.5 bits (227), Expect = 3e-20
Identities = 55/174 (31%), Positives = 97/174 (55%), Gaps = 1/174 (0%)
Frame = +1
Query: 133 SNRKILSEDLSNVEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIV 312
+ +K+++E+ +E D EDV+ +F +G+ L G+ KPS IQQ ++ +
Sbjct: 24 TKKKVVTEE---IEKDDEEDVKE-KSFAELGVSQPLCDACQRLGWMKPSKIQQAALPHAL 79
Query: 313 KGRDVIAQAQSGTGKTATFSISILQTLDTTLRETQVLILSPTRELATQIQKVILALGDFM 492
+G+DVI A++G+GKT F+I +LQ+L + L+L+PTRELA QI + ALG +
Sbjct: 80 QGKDVIGLAETGSGKTGAFAIPVLQSLLDHPQAFFCLVLTPTRELAFQIGQQFEALGSGI 139
Query: 493 NVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIRR-RVLRTRSIKMLVL 651
+ +GG ++ L H++ TPGR+ D + + +++K L++
Sbjct: 140 GLIAAVIVGGVDMAAQAMALARRPHIIVATPGRLVDHLENTKGFNLKALKFLIM 193
>AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical
protein H20J04.4a protein.
Length = 488
Score = 95.5 bits (227), Expect = 3e-20
Identities = 56/162 (34%), Positives = 83/162 (51%)
Frame = +1
Query: 121 SEVSSNRKILSEDLSNVEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSI 300
SE + S D + SED F +G+ + + + T + + +Q I
Sbjct: 61 SEGEEGDEFKSSDDTPKPIQISEDNMTTKKFSQLGVCSWITQQLQTMQIKTATPVQAACI 120
Query: 301 LPIVKGRDVIAQAQSGTGKTATFSISILQTLDTTLRETQVLILSPTRELATQIQKVILAL 480
I++G D++ A++GTGKT F+I ILQ L LIL+PTRELA QI + AL
Sbjct: 121 PKILEGSDILGCARTGTGKTLAFAIPILQKLSVDPYGIYALILTPTRELAFQIAEQFTAL 180
Query: 481 GDFMNVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMI 606
G + ++C +GG +L R+L HVV TPGR+ D+I
Sbjct: 181 GKPITLKCSVIVGGRSLIHQARELSERPHVVVATPGRLADLI 222
>AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical
protein H20J04.4b protein.
Length = 561
Score = 95.5 bits (227), Expect = 3e-20
Identities = 56/162 (34%), Positives = 83/162 (51%)
Frame = +1
Query: 121 SEVSSNRKILSEDLSNVEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSI 300
SE + S D + SED F +G+ + + + T + + +Q I
Sbjct: 61 SEGEEGDEFKSSDDTPKPIQISEDNMTTKKFSQLGVCSWITQQLQTMQIKTATPVQAACI 120
Query: 301 LPIVKGRDVIAQAQSGTGKTATFSISILQTLDTTLRETQVLILSPTRELATQIQKVILAL 480
I++G D++ A++GTGKT F+I ILQ L LIL+PTRELA QI + AL
Sbjct: 121 PKILEGSDILGCARTGTGKTLAFAIPILQKLSVDPYGIYALILTPTRELAFQIAEQFTAL 180
Query: 481 GDFMNVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMI 606
G + ++C +GG +L R+L HVV TPGR+ D+I
Sbjct: 181 GKPITLKCSVIVGGRSLIHQARELSERPHVVVATPGRLADLI 222
>Z54327-7|CAD57690.1| 268|Caenorhabditis elegans Hypothetical
protein C26D10.2b protein.
Length = 268
Score = 90.6 bits (215), Expect = 8e-19
Identities = 55/144 (38%), Positives = 77/144 (53%), Gaps = 2/144 (1%)
Frame = +1
Query: 226 LRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQTLDTTL 405
L+ E+LR I GFE PS +Q I + G DV+ QA+SG GKTA F I+ LQ L+
Sbjct: 48 LKPEILRAIGDCGFEHPSEVQHECIPQAILGMDVVCQAKSGMGKTAVFVITTLQQLEPVD 107
Query: 406 RETQVLILSPTRELATQIQKVILALGDFM-NVQCHACIGGTNLGEDIRKL-DYGQHVVSG 579
E V+ + TRELA QI K ++ V+ GG + +D +L + H+V G
Sbjct: 108 GEVSVVCMCHTRELAFQISKEYERFSKYLPGVKVAVFFGGMAIKKDEERLANDCPHIVVG 167
Query: 580 TPGRVFDMIRRRVLRTRSIKMLVL 651
TPGR+ + R L+ +K VL
Sbjct: 168 TPGRMLALARSGKLKLDKVKYFVL 191
>Z54327-6|CAA91120.1| 425|Caenorhabditis elegans Hypothetical
protein C26D10.2a protein.
Length = 425
Score = 90.6 bits (215), Expect = 8e-19
Identities = 55/144 (38%), Positives = 77/144 (53%), Gaps = 2/144 (1%)
Frame = +1
Query: 226 LRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQTLDTTL 405
L+ E+LR I GFE PS +Q I + G DV+ QA+SG GKTA F I+ LQ L+
Sbjct: 48 LKPEILRAIGDCGFEHPSEVQHECIPQAILGMDVVCQAKSGMGKTAVFVITTLQQLEPVD 107
Query: 406 RETQVLILSPTRELATQIQKVILALGDFM-NVQCHACIGGTNLGEDIRKL-DYGQHVVSG 579
E V+ + TRELA QI K ++ V+ GG + +D +L + H+V G
Sbjct: 108 GEVSVVCMCHTRELAFQISKEYERFSKYLPGVKVAVFFGGMAIKKDEERLANDCPHIVVG 167
Query: 580 TPGRVFDMIRRRVLRTRSIKMLVL 651
TPGR+ + R L+ +K VL
Sbjct: 168 TPGRMLALARSGKLKLDKVKYFVL 191
>U08102-1|AAB65852.1| 417|Caenorhabditis elegans putative RNA
helicase protein.
Length = 417
Score = 90.6 bits (215), Expect = 8e-19
Identities = 55/144 (38%), Positives = 77/144 (53%), Gaps = 2/144 (1%)
Frame = +1
Query: 226 LRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQTLDTTL 405
L+ E+LR I GFE PS +Q I + G DV+ QA+SG GKTA F I+ LQ L+
Sbjct: 47 LKPEILRAIGDCGFEHPSEVQHECIPQAILGMDVVCQAKSGMGKTAVFVITTLQQLEPVD 106
Query: 406 RETQVLILSPTRELATQIQKVILALGDFM-NVQCHACIGGTNLGEDIRKL-DYGQHVVSG 579
E V+ + TRELA QI K ++ V+ GG + +D +L + H+V G
Sbjct: 107 GEVSVVCMCHTRELAFQISKEYERFSKYLPGVKVAVFFGGMAIKKDEERLANDCPHIVVG 166
Query: 580 TPGRVFDMIRRRVLRTRSIKMLVL 651
TPGR+ + R L+ +K VL
Sbjct: 167 TPGRMLALARSGKLKLDKVKYFVL 190
>AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical
protein Y71G12B.8 protein.
Length = 763
Score = 90.2 bits (214), Expect = 1e-18
Identities = 56/154 (36%), Positives = 82/154 (53%), Gaps = 4/154 (2%)
Frame = +1
Query: 151 SEDLSNVEFD-TSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDV 327
+ED + D S D V +F+ M L ++L+ G+ P+ IQQ I + G+D+
Sbjct: 129 NEDFFSALIDGKSLDTSVNVSFEQMNLSRQILKACSGAGYSDPTPIQQACIPVALTGKDI 188
Query: 328 IAQAQSGTGKTATFSISILQTLDTTLRE---TQVLILSPTRELATQIQKVILALGDFMNV 498
A A +GTGKTA F + IL+ + + T+VL+L PTRELA Q+ +V L F+ +
Sbjct: 189 CACAATGTGKTAAFVLPILERMIYRPKGASCTRVLVLVPTRELAIQVFQVFRKLSTFIQL 248
Query: 499 QCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVFD 600
+ C GG +L L G VV TPGR+ D
Sbjct: 249 EVCLCAGGLDLKAQEAALRSGPDVVVATPGRLID 282
>Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical
protein T07D4.4c protein.
Length = 613
Score = 88.2 bits (209), Expect = 4e-18
Identities = 56/162 (34%), Positives = 93/162 (57%), Gaps = 4/162 (2%)
Frame = +1
Query: 178 DTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSI--LPIVKGRDVIAQAQSGT 351
D + I +F + L+ E+L+ + T F+ P+ IQ+ ++ L + ++IAQAQSGT
Sbjct: 200 DPKSPLYSISSFRELRLKPEVLKALDTMNFQFPTRIQETALPLLLMEPPSNLIAQAQSGT 259
Query: 352 GKTATFSISILQTLDTTLRETQVLILSPTRELATQIQKVILALGDFM-NVQCHACIGGTN 528
GKTA F +++L +D L Q + L+PT ELA QI +V+ +G F+ N++ H I G N
Sbjct: 260 GKTAAFVLTMLCRIDVNLMCPQCICLAPTLELAKQIGEVVEKMGKFIDNLKIHYAIKGGN 319
Query: 529 LGEDIRKLDYGQHVVSGTPGRVFDMIRR-RVLRTRSIKMLVL 651
+ +R + +V GTPG D +++ + + I+ LVL
Sbjct: 320 MAA-MRGRKLTEQIVIGTPGITRDYLQKYKCIDPSKIRCLVL 360
>Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical
protein T07D4.4b protein.
Length = 638
Score = 88.2 bits (209), Expect = 4e-18
Identities = 56/162 (34%), Positives = 93/162 (57%), Gaps = 4/162 (2%)
Frame = +1
Query: 178 DTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSI--LPIVKGRDVIAQAQSGT 351
D + I +F + L+ E+L+ + T F+ P+ IQ+ ++ L + ++IAQAQSGT
Sbjct: 225 DPKSPLYSISSFRELRLKPEVLKALDTMNFQFPTRIQETALPLLLMEPPSNLIAQAQSGT 284
Query: 352 GKTATFSISILQTLDTTLRETQVLILSPTRELATQIQKVILALGDFM-NVQCHACIGGTN 528
GKTA F +++L +D L Q + L+PT ELA QI +V+ +G F+ N++ H I G N
Sbjct: 285 GKTAAFVLTMLCRIDVNLMCPQCICLAPTLELAKQIGEVVEKMGKFIDNLKIHYAIKGGN 344
Query: 529 LGEDIRKLDYGQHVVSGTPGRVFDMIRR-RVLRTRSIKMLVL 651
+ +R + +V GTPG D +++ + + I+ LVL
Sbjct: 345 MAA-MRGRKLTEQIVIGTPGITRDYLQKYKCIDPSKIRCLVL 385
>Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical protein
T07D4.4a protein.
Length = 1022
Score = 88.2 bits (209), Expect = 4e-18
Identities = 56/162 (34%), Positives = 93/162 (57%), Gaps = 4/162 (2%)
Frame = +1
Query: 178 DTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSI--LPIVKGRDVIAQAQSGT 351
D + I +F + L+ E+L+ + T F+ P+ IQ+ ++ L + ++IAQAQSGT
Sbjct: 609 DPKSPLYSISSFRELRLKPEVLKALDTMNFQFPTRIQETALPLLLMEPPSNLIAQAQSGT 668
Query: 352 GKTATFSISILQTLDTTLRETQVLILSPTRELATQIQKVILALGDFM-NVQCHACIGGTN 528
GKTA F +++L +D L Q + L+PT ELA QI +V+ +G F+ N++ H I G N
Sbjct: 669 GKTAAFVLTMLCRIDVNLMCPQCICLAPTLELAKQIGEVVEKMGKFIDNLKIHYAIKGGN 728
Query: 529 LGEDIRKLDYGQHVVSGTPGRVFDMIRR-RVLRTRSIKMLVL 651
+ +R + +V GTPG D +++ + + I+ LVL
Sbjct: 729 MAA-MRGRKLTEQIVIGTPGITRDYLQKYKCIDPSKIRCLVL 769
>EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein.
Length = 973
Score = 86.6 bits (205), Expect = 1e-17
Identities = 50/170 (29%), Positives = 93/170 (54%), Gaps = 3/170 (1%)
Frame = +1
Query: 151 SEDLSNVEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVI 330
SE + ++ +S DV+ TF+S+ + + L + F++PS +Q R+I + GRD++
Sbjct: 4 SEVIEVLDRGSSIDVQSNCTFESLMIGQKTLERLKNSQFDRPSPVQARAIPVGLLGRDML 63
Query: 331 AQAQSGTGKTATFSISILQTLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHA 510
QA+SGTGKT FS+ ++ LD+ Q +I++PTRE++ QI++ + + +
Sbjct: 64 VQAKSGTGKTLVFSVLAVENLDSRSSHIQKVIVTPTREISVQIKETVRKVAP-TGARTSV 122
Query: 511 CIGGTNLGEDIRKLDYGQ---HVVSGTPGRVFDMIRRRVLRTRSIKMLVL 651
+GG+ + +D Q +V GTPGR+ +++ + + VL
Sbjct: 123 YVGGS--AHKLNLIDLKQTRPQIVIGTPGRIAQLVKLGAMNMSHVDFFVL 170
>CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical
protein T06A10.1 protein.
Length = 973
Score = 86.6 bits (205), Expect = 1e-17
Identities = 50/170 (29%), Positives = 93/170 (54%), Gaps = 3/170 (1%)
Frame = +1
Query: 151 SEDLSNVEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVI 330
SE + ++ +S DV+ TF+S+ + + L + F++PS +Q R+I + GRD++
Sbjct: 4 SEVIEVLDRGSSIDVQSNCTFESLMIGQKTLERLKNSQFDRPSPVQARAIPVGLLGRDML 63
Query: 331 AQAQSGTGKTATFSISILQTLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHA 510
QA+SGTGKT FS+ ++ LD+ Q +I++PTRE++ QI++ + + +
Sbjct: 64 VQAKSGTGKTLVFSVLAVENLDSRSSHIQKVIVTPTREISVQIKETVRKVAP-TGARTSV 122
Query: 511 CIGGTNLGEDIRKLDYGQ---HVVSGTPGRVFDMIRRRVLRTRSIKMLVL 651
+GG+ + +D Q +V GTPGR+ +++ + + VL
Sbjct: 123 YVGGS--AHKLNLIDLKQTRPQIVIGTPGRIAQLVKLGAMNMSHVDFFVL 170
>AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical
protein F53H1.1 protein.
Length = 970
Score = 85.4 bits (202), Expect = 3e-17
Identities = 59/196 (30%), Positives = 100/196 (51%), Gaps = 8/196 (4%)
Frame = +1
Query: 88 LEAN*IRKMTSSEVSSNRKILSEDLSNVEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGF 267
+E IR+MT +EV + R E+L ++ + + I T+ G+ +++ + + +
Sbjct: 269 IETEEIRRMTKAEVKAYR----EELDSITVKGIDCPKPIKTWAQCGVNLKMMNVLKKFEY 324
Query: 268 EKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQTL--DTTLRETQ---VLILS 432
KP++IQ ++I I+ GRDVI A++G+GKT F + + + + L E +IL+
Sbjct: 325 SKPTSIQAQAIPSIMSGRDVIGIAKTGSGKTLAFLLPMFRHILDQPELEEGDGPIAVILA 384
Query: 433 PTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIRR 612
PTRELA Q K + ++ GG + E I L G +V TPGR+ D++
Sbjct: 385 PTRELAMQTYKEANKFAKPLGLKVACTYGGVGISEQIADLKRGAEIVVCTPGRMIDVLAA 444
Query: 613 ---RVLRTRSIKMLVL 651
+V R + LVL
Sbjct: 445 NSGKVTNLRRVTYLVL 460
>U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical
protein F01F1.7 protein.
Length = 730
Score = 82.2 bits (194), Expect = 3e-16
Identities = 55/187 (29%), Positives = 96/187 (51%), Gaps = 10/187 (5%)
Frame = +1
Query: 121 SEVSSNR-KILSEDLSNVEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRS 297
SE+S +I ED N+ + ++ G DE+ + + G+ +P+ IQ+++
Sbjct: 273 SEMSDRDWRIFREDF-NISIKGGRVPRPLRNWEEAGFPDEVYQAVKEIGYLEPTPIQRQA 331
Query: 298 ILPIVKGRDVIAQAQSGTGKTATFSISILQTLDTTLR-ETQ--------VLILSPTRELA 450
I ++ RDVI A++G+GKTA F + +L + + + E Q +I++PTRELA
Sbjct: 332 IPIGLQNRDVIGVAETGSGKTAAFLLPLLVWITSLPKMERQEHRDLGPYAIIMAPTRELA 391
Query: 451 TQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIRRRVLRTR 630
QI++ G + ++ + IGG + + KL G VV TPGR+ D++ R L
Sbjct: 392 QQIEEETNKFGKLLGIKTVSVIGGASREDQGMKLRMGVEVVIATPGRLLDVLENRYLLLN 451
Query: 631 SIKMLVL 651
++L
Sbjct: 452 QCTYVIL 458
>AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform c protein.
Length = 660
Score = 81.4 bits (192), Expect = 5e-16
Identities = 56/180 (31%), Positives = 88/180 (48%), Gaps = 18/180 (10%)
Frame = +1
Query: 166 NVEFDTSEDV--EVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQA 339
N+ + S D I F+ G ++ + G+ KP+ +Q+ SI ++ RD+++ A
Sbjct: 124 NIPVEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRDLMSCA 183
Query: 340 QSGTGKTATFSISILQTL------------DTTLRETQ---VLILSPTRELATQIQKVIL 474
Q+G+GKTA F + I+Q + T R T L+LSPTRELA QI K
Sbjct: 184 QTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAIQIHKEAT 243
Query: 475 ALGDFMNVQCHACIGGT-NLGEDIRKLDYGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVL 651
N+Q GG N + + +L G H++ TPGR+ D+I + + + LVL
Sbjct: 244 KFSYKSNIQTAILYGGRENYRDQVNRLRAGTHILIATPGRLIDIIEQGFIGLAGCRYLVL 303
>AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform b protein.
Length = 644
Score = 81.4 bits (192), Expect = 5e-16
Identities = 56/180 (31%), Positives = 88/180 (48%), Gaps = 18/180 (10%)
Frame = +1
Query: 166 NVEFDTSEDV--EVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQA 339
N+ + S D I F+ G ++ + G+ KP+ +Q+ SI ++ RD+++ A
Sbjct: 108 NIPVEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRDLMSCA 167
Query: 340 QSGTGKTATFSISILQTL------------DTTLRETQ---VLILSPTRELATQIQKVIL 474
Q+G+GKTA F + I+Q + T R T L+LSPTRELA QI K
Sbjct: 168 QTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAIQIHKEAT 227
Query: 475 ALGDFMNVQCHACIGGT-NLGEDIRKLDYGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVL 651
N+Q GG N + + +L G H++ TPGR+ D+I + + + LVL
Sbjct: 228 KFSYKSNIQTAILYGGRENYRDQVNRLRAGTHILIATPGRLIDIIEQGFIGLAGCRYLVL 287
>AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform a protein.
Length = 641
Score = 81.4 bits (192), Expect = 5e-16
Identities = 56/180 (31%), Positives = 88/180 (48%), Gaps = 18/180 (10%)
Frame = +1
Query: 166 NVEFDTSEDV--EVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQA 339
N+ + S D I F+ G ++ + G+ KP+ +Q+ SI ++ RD+++ A
Sbjct: 105 NIPVEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRDLMSCA 164
Query: 340 QSGTGKTATFSISILQTL------------DTTLRETQ---VLILSPTRELATQIQKVIL 474
Q+G+GKTA F + I+Q + T R T L+LSPTRELA QI K
Sbjct: 165 QTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAIQIHKEAT 224
Query: 475 ALGDFMNVQCHACIGGT-NLGEDIRKLDYGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVL 651
N+Q GG N + + +L G H++ TPGR+ D+I + + + LVL
Sbjct: 225 KFSYKSNIQTAILYGGRENYRDQVNRLRAGTHILIATPGRLIDIIEQGFIGLAGCRYLVL 284
>AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical
protein B0511.6 protein.
Length = 544
Score = 79.8 bits (188), Expect = 2e-15
Identities = 49/143 (34%), Positives = 82/143 (57%), Gaps = 5/143 (3%)
Frame = +1
Query: 238 LLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATF---SISILQTLDTTLR 408
LL+ + GF + IQ +SI P+++G+DV+A A++G+GKT F +I +L L+
Sbjct: 79 LLKAVQGLGFTTMTEIQAKSIDPLLEGKDVLASAKTGSGKTLAFLLPAIELLHKLNWKQH 138
Query: 409 E-TQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQHVVSGTP 585
T V+I+SPTREL+ Q V+ L + N+ +GG+N + KL G ++ TP
Sbjct: 139 NGTGVIIVSPTRELSMQTYGVLSELLEGSNLTYGLVMGGSNRSAEKDKLAKGVSILVATP 198
Query: 586 GRVFDMIRRR-VLRTRSIKMLVL 651
GR+ D ++ R++K L++
Sbjct: 199 GRLLDHLQNTDNFLVRNMKCLII 221
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical
protein F58E10.3a protein.
Length = 561
Score = 76.2 bits (179), Expect = 2e-14
Identities = 46/137 (33%), Positives = 70/137 (51%), Gaps = 6/137 (4%)
Frame = +1
Query: 259 YG-FEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQTLDTTLRETQ-----V 420
YG F+KP+ IQ S + GRD+I+ A++G+GKT F + L + + V
Sbjct: 146 YGKFQKPTVIQSISWPIAMSGRDIISIAKTGSGKTLAFMLPALVHITKQAHRQRGEGPAV 205
Query: 421 LILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVFD 600
L+L PTRELA Q+Q+V + + ++ GG + G R L+ G +V TPGR+ D
Sbjct: 206 LVLLPTRELAQQVQEVSIDFCHSLGLKMTCLFGGASKGPQARDLERGVDIVVATPGRLLD 265
Query: 601 MIRRRVLRTRSIKMLVL 651
+ + LVL
Sbjct: 266 FLDNGTTNMKKCSYLVL 282
>AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical
protein Y71H2AM.19 protein.
Length = 643
Score = 74.5 bits (175), Expect = 6e-14
Identities = 56/198 (28%), Positives = 94/198 (47%), Gaps = 27/198 (13%)
Frame = +1
Query: 139 RKILSEDLSNVEFDTSEDVEV----------IPTFDSMGLRDELLRGIYTYGFEKPSAIQ 288
+++ S LS + FD E++ V I F + L + + I T G+++P+ +Q
Sbjct: 134 QELFSGQLSGINFDKYEEIPVEATGDDVPQPISLFSDLSLHEWIEENIKTAGYDRPTPVQ 193
Query: 289 QRSILPIVKGRDVIAQAQSGTGKTATFSISILQTL-----DTTLRET-----------QV 420
+ SI + GRD+++ AQ+G+GKTA F + ++ + D R
Sbjct: 194 KYSIPALQGGRDLMSCAQTGSGKTAAFLVPLVNAILQDGPDAVHRSVTSSGGRKKQYPSA 253
Query: 421 LILSPTRELATQIQKVILALGDFMNVQCHACIGG-TNLGEDIRKLDYGQHVVSGTPGRVF 597
L+LSPTREL+ QI + GG N + I KL G H++ TPGR+
Sbjct: 254 LVLSPTRELSLQIFNESRKFAYRTPITSALLYGGRENYKDQIHKLRLGCHILIATPGRLI 313
Query: 598 DMIRRRVLRTRSIKMLVL 651
D++ + ++ + LVL
Sbjct: 314 DVMDQGLIGMEGCRYLVL 331
>AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical
protein H27M09.1 protein.
Length = 630
Score = 74.5 bits (175), Expect = 6e-14
Identities = 47/144 (32%), Positives = 78/144 (54%), Gaps = 14/144 (9%)
Frame = +1
Query: 262 GFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISIL-----QTLDTTLRETQV-- 420
G P+AIQ + I + GRD+I A +G+GKT TF + ++ Q + ++
Sbjct: 209 GIVTPTAIQIQGIPVALSGRDMIGIASTGSGKTMTFVLPLVMFCLEQEMKLPFMRSEGPF 268
Query: 421 -LILSPTRELATQIQKVILALGDFMN------VQCHACIGGTNLGEDIRKLDYGQHVVSG 579
LI+ P+RELA QI +I+ + D + ++ CIGG +GE + + G H+V
Sbjct: 269 GLIIVPSRELARQIFDLIIEMFDALGKAGLPEMRAGLCIGGVPIGEQAKDVRDGIHIVVA 328
Query: 580 TPGRVFDMIRRRVLRTRSIKMLVL 651
TPGR+ DM+ ++++ + LVL
Sbjct: 329 TPGRLSDMLTKKIINLEVCRYLVL 352
>AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical
protein C24H12.4a protein.
Length = 634
Score = 70.1 bits (164), Expect = 1e-12
Identities = 50/187 (26%), Positives = 93/187 (49%), Gaps = 6/187 (3%)
Frame = +1
Query: 109 KMTSSEVSSNRKILSEDLSNVEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQ 288
+M S+ +K++ E L + D + TF GL + +L+ I G+EK + +Q
Sbjct: 58 RMKKSQAEKRQKLM-ESLVGPQVDEMDFEPEHKTFADFGLDERILKSIGELGWEKANQVQ 116
Query: 289 QRSILPIVKGRDVIAQAQSGTGKTATFSISILQTL--DTTLRETQV----LILSPTRELA 450
+ I ++ ++++ +A++G+GKT F I ++Q L ++ + V +I++PT+EL
Sbjct: 117 ESVISLALENKNIMGRARTGSGKTGAFLIPLVQKLIAESKTNDGSVGPSAVIIAPTKELI 176
Query: 451 TQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIRRRVLRTR 630
TQI K+ + L + + N E+ L+ HVV TPG++ M R
Sbjct: 177 TQIYKLFVKLSQALPFLQAINLCDINEEENSVWLEDRSHVVVTTPGKLLRMCSLRPEYCT 236
Query: 631 SIKMLVL 651
+ LV+
Sbjct: 237 LVSYLVM 243
>AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical
protein Y54G11A.3 protein.
Length = 504
Score = 68.9 bits (161), Expect = 3e-12
Identities = 48/156 (30%), Positives = 75/156 (48%), Gaps = 11/156 (7%)
Frame = +1
Query: 217 SMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQTLD 396
+ G ++ I GFEKPS IQ + ++ G+D I +Q+G+GKT F + L +D
Sbjct: 88 AFGSNASIMGEIRKNGFEKPSPIQSQMWPLLLSGQDCIGVSQTGSGKTLAFLLPALLHID 147
Query: 397 TTLRETQ-----------VLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDI 543
L + + VL+LSPTRELA QI+ + + + GG + E +
Sbjct: 148 AQLAQYEKNDEEQKPSPFVLVLSPTRELAQQIEGEVKKY-SYNGYKSVCLYGGGSRPEQV 206
Query: 544 RKLDYGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVL 651
G +V TPGR+ D+ V+ S+ +VL
Sbjct: 207 EACRGGVEIVIATPGRLTDLSNDGVISLASVTYVVL 242
>AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical
protein Y23H5B.6 protein.
Length = 732
Score = 68.5 bits (160), Expect = 4e-12
Identities = 47/152 (30%), Positives = 76/152 (50%), Gaps = 5/152 (3%)
Frame = +1
Query: 211 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT 390
F+ L L G+ + KP+ IQ+ +I + G DV+ A++G+GKT I +L+
Sbjct: 78 FEDFPLSWRTLEGLKDNDYTKPTEIQRDTIAYSLTGSDVVGAAKTGSGKTLALVIPVLEA 137
Query: 391 LDTTLRETQ----VLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDY 558
L LI+SPTRELA Q I A+G C IGG+++ + ++
Sbjct: 138 LWRAKWSPDYGLGALIISPTRELALQTFSTINAVGAHHGFSCGLVIGGSDVAFERNRIS- 196
Query: 559 GQHVVSGTPGRVFD-MIRRRVLRTRSIKMLVL 651
G +++ TPGR+ M + S+++LVL
Sbjct: 197 GINIIVCTPGRLLQHMDENAQMSCDSLQVLVL 228
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 63.3 bits (147), Expect = 1e-10
Identities = 44/179 (24%), Positives = 82/179 (45%), Gaps = 9/179 (5%)
Frame = +1
Query: 142 KILSEDLSNVEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGR 321
K ++ + + ++ TF L + + + + G+ K + IQQ ++ + +G
Sbjct: 320 KFFDAEVKLTSSEKTVGIKPCKTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGY 379
Query: 322 DVIAQAQSGTGKTATFSISILQTL--DTTLRET-------QVLILSPTRELATQIQKVIL 474
D++A AQ+G+GKTA F + I+ L D L + +IL+PTRELA QI
Sbjct: 380 DIMACAQTGSGKTAAFLLPIMTRLIDDNNLNTAGEGGCYPRCIILTPTRELADQIYNEGR 439
Query: 475 ALGDFMNVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVL 651
++ GG +G + +++ G ++ GT GR+ ++ + VL
Sbjct: 440 KFAYQTMMEIKPVYGGLAVGYNKGQIEKGATIIVGTVGRIKHFCEEGTIKLDKCRFFVL 498
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 63.3 bits (147), Expect = 1e-10
Identities = 44/179 (24%), Positives = 82/179 (45%), Gaps = 9/179 (5%)
Frame = +1
Query: 142 KILSEDLSNVEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGR 321
K ++ + + ++ TF L + + + + G+ K + IQQ ++ + +G
Sbjct: 320 KFFDAEVKLTSSEKTVGIKPCKTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGY 379
Query: 322 DVIAQAQSGTGKTATFSISILQTL--DTTLRET-------QVLILSPTRELATQIQKVIL 474
D++A AQ+G+GKTA F + I+ L D L + +IL+PTRELA QI
Sbjct: 380 DIMACAQTGSGKTAAFLLPIMTRLIDDNNLNTAGEGGCYPRCIILTPTRELADQIYNEGR 439
Query: 475 ALGDFMNVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVL 651
++ GG +G + +++ G ++ GT GR+ ++ + VL
Sbjct: 440 KFAYQTMMEIKPVYGGLAVGYNKGQIEKGATIIVGTVGRIKHFCEEGTIKLDKCRFFVL 498
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line
helicase protein 1 protein.
Length = 763
Score = 63.3 bits (147), Expect = 1e-10
Identities = 44/179 (24%), Positives = 82/179 (45%), Gaps = 9/179 (5%)
Frame = +1
Query: 142 KILSEDLSNVEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGR 321
K ++ + + ++ TF L + + + + G+ K + IQQ ++ + +G
Sbjct: 320 KFFDAEVKLTSSEKTVGIKPCKTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGY 379
Query: 322 DVIAQAQSGTGKTATFSISILQTL--DTTLRET-------QVLILSPTRELATQIQKVIL 474
D++A AQ+G+GKTA F + I+ L D L + +IL+PTRELA QI
Sbjct: 380 DIMACAQTGSGKTAAFLLPIMTRLIDDNNLNTAGEGGCYPRCIILTPTRELADQIYNEGR 439
Query: 475 ALGDFMNVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVL 651
++ GG +G + +++ G ++ GT GR+ ++ + VL
Sbjct: 440 KFAYQTMMEIKPVYGGLAVGYNKGQIEKGATIIVGTVGRIKHFCEEGTIKLDKCRFFVL 498
>U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein.
Length = 974
Score = 62.1 bits (144), Expect = 3e-10
Identities = 43/162 (26%), Positives = 77/162 (47%), Gaps = 9/162 (5%)
Frame = +1
Query: 193 VEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFS 372
V+ TF L + + + + G+ K + IQQ ++ I +G D++A AQ+G+GKTA F
Sbjct: 548 VKTCKTFSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFL 607
Query: 373 ISIL-QTLDTTLRET--------QVLILSPTRELATQIQKVILALGDFMNVQCHACIGGT 525
+ I+ + +D T + +IL+PTREL QI ++ GG
Sbjct: 608 LPIMARLIDENDLNTAGEGGCYPRCIILTPTRELTDQIYNEGRKFAYQTMMEIRPVYGGL 667
Query: 526 NLGEDIRKLDYGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVL 651
+G + +++ G ++ GT GR+ ++ + VL
Sbjct: 668 AVGYNKGQIEKGATIIVGTVGRIKHFCEEGTIKLDKCRFFVL 709
>U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GLH-2
protein.
Length = 974
Score = 62.1 bits (144), Expect = 3e-10
Identities = 43/162 (26%), Positives = 77/162 (47%), Gaps = 9/162 (5%)
Frame = +1
Query: 193 VEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFS 372
V+ TF L + + + + G+ K + IQQ ++ I +G D++A AQ+G+GKTA F
Sbjct: 548 VKTCKTFSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFL 607
Query: 373 ISIL-QTLDTTLRET--------QVLILSPTRELATQIQKVILALGDFMNVQCHACIGGT 525
+ I+ + +D T + +IL+PTREL QI ++ GG
Sbjct: 608 LPIMARLIDENDLNTAGEGGCYPRCIILTPTRELTDQIYNEGRKFAYQTMMEIRPVYGGL 667
Query: 526 NLGEDIRKLDYGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVL 651
+G + +++ G ++ GT GR+ ++ + VL
Sbjct: 668 AVGYNKGQIEKGATIIVGTVGRIKHFCEEGTIKLDKCRFFVL 709
>AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line
helicase protein 2 protein.
Length = 974
Score = 62.1 bits (144), Expect = 3e-10
Identities = 43/162 (26%), Positives = 77/162 (47%), Gaps = 9/162 (5%)
Frame = +1
Query: 193 VEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFS 372
V+ TF L + + + + G+ K + IQQ ++ I +G D++A AQ+G+GKTA F
Sbjct: 548 VKTCKTFSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFL 607
Query: 373 ISIL-QTLDTTLRET--------QVLILSPTRELATQIQKVILALGDFMNVQCHACIGGT 525
+ I+ + +D T + +IL+PTREL QI ++ GG
Sbjct: 608 LPIMARLIDENDLNTAGEGGCYPRCIILTPTRELTDQIYNEGRKFAYQTMMEIRPVYGGL 667
Query: 526 NLGEDIRKLDYGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVL 651
+G + +++ G ++ GT GR+ ++ + VL
Sbjct: 668 AVGYNKGQIEKGATIIVGTVGRIKHFCEEGTIKLDKCRFFVL 709
>AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA
helicase-3 protein.
Length = 720
Score = 61.7 bits (143), Expect = 4e-10
Identities = 54/194 (27%), Positives = 90/194 (46%), Gaps = 18/194 (9%)
Frame = +1
Query: 124 EVSSNRKILSEDLSNVEFDTS-------EDVEVIP--TFDSMGLRDELLRGIYTYGFEKP 276
EV S KI + D + FD S + V + P +F + + R + G+ +
Sbjct: 262 EVFSMLKINAGDFFDKFFDASVQLVSRGQPVTIQPCKSFSDSDIPQSMRRNVERAGYTRT 321
Query: 277 SAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ--TLDTTLR-------ETQVLIL 429
+ IQQ ++ + G+D++A AQ+G+GKTA F + I+ L+ L + +IL
Sbjct: 322 TPIQQYTLPLVADGKDILACAQTGSGKTAAFLLPIMSRLILEKDLNYGAEGGCYPRCIIL 381
Query: 430 SPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIR 609
+PTRELA QI ++ GG N+G + ++ G ++ GT GRV
Sbjct: 382 TPTRELADQIYNEGRKFSYQSVMEIKPVYGGINVGYNKSQIMKGCTIIVGTIGRVKHFCE 441
Query: 610 RRVLRTRSIKMLVL 651
++ + LVL
Sbjct: 442 DGAIKLDKCRYLVL 455
>AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line
helicase protein 3 protein.
Length = 720
Score = 61.7 bits (143), Expect = 4e-10
Identities = 54/194 (27%), Positives = 90/194 (46%), Gaps = 18/194 (9%)
Frame = +1
Query: 124 EVSSNRKILSEDLSNVEFDTS-------EDVEVIP--TFDSMGLRDELLRGIYTYGFEKP 276
EV S KI + D + FD S + V + P +F + + R + G+ +
Sbjct: 262 EVFSMLKINAGDFFDKFFDASVQLVSRGQPVTIQPCKSFSDSDIPQSMRRNVERAGYTRT 321
Query: 277 SAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ--TLDTTLR-------ETQVLIL 429
+ IQQ ++ + G+D++A AQ+G+GKTA F + I+ L+ L + +IL
Sbjct: 322 TPIQQYTLPLVADGKDILACAQTGSGKTAAFLLPIMSRLILEKDLNYGAEGGCYPRCIIL 381
Query: 430 SPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIR 609
+PTRELA QI ++ GG N+G + ++ G ++ GT GRV
Sbjct: 382 TPTRELADQIYNEGRKFSYQSVMEIKPVYGGINVGYNKSQIMKGCTIIVGTIGRVKHFCE 441
Query: 610 RRVLRTRSIKMLVL 651
++ + LVL
Sbjct: 442 DGAIKLDKCRYLVL 455
>U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical
protein F55F8.2a protein.
Length = 746
Score = 61.3 bits (142), Expect = 6e-10
Identities = 45/141 (31%), Positives = 73/141 (51%), Gaps = 13/141 (9%)
Frame = +1
Query: 226 LRDELLRGIYTYGFEKPSAIQQRSILPIVKGR-DVIAQAQSGTGKTATFSISIL------ 384
L +E+L I GF +P+ IQ + V+ R DV+ A++G+GKT F I ++
Sbjct: 162 LPNEVLEAIEQMGFSEPTEIQSAVLPAAVRDRQDVLGAAETGSGKTLAFGIPLVARLLES 221
Query: 385 -----QTLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRK 549
+T T +R + LI++PTREL QI K I AL + + +GG + R
Sbjct: 222 SDDSQETESTEVRGPRALIVAPTRELVIQIMKHINALISTTQLIATSIVGGLAQVKQERI 281
Query: 550 LDYGQ-HVVSGTPGRVFDMIR 609
+ + +V TPGR++ M++
Sbjct: 282 ISQQRPDIVVATPGRLWAMMQ 302
>Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical
protein C46F11.4 protein.
Length = 811
Score = 60.5 bits (140), Expect = 1e-09
Identities = 41/130 (31%), Positives = 67/130 (51%), Gaps = 6/130 (4%)
Frame = +1
Query: 238 LLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATF----SISILQTLDTTL 405
L+ I +E+P+ IQ +I + GRDV+ A++G+GKTA + + I+ D
Sbjct: 276 LMEAIRKSEYEQPTPIQAMAIPSALSGRDVLGIAKTGSGKTAAYLWPAIVHIMDQPDLKA 335
Query: 406 RETQV-LILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKL-DYGQHVVSG 579
E V +I+ PTRELA Q+ + N+ GG + E +L + G +V
Sbjct: 336 GEGPVAVIVVPTRELAIQVFQEAKKFCKVYNINPICAYGGGSKWEQSNELQNEGAEMVVC 395
Query: 580 TPGRVFDMIR 609
TPGR+ D+++
Sbjct: 396 TPGRIIDLVK 405
>Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical
protein ZK512.2 protein.
Length = 578
Score = 59.7 bits (138), Expect = 2e-09
Identities = 40/147 (27%), Positives = 79/147 (53%), Gaps = 5/147 (3%)
Frame = +1
Query: 226 LRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQTLDTT- 402
L ELL ++ ++ + +Q S ++ DV+ ++ +G+GKT F + +++ +
Sbjct: 17 LGPELLE-VFDKSYKSFTDVQVLSGTHLLNLSDVVVESPTGSGKTLAFVLPMMRMIQNAK 75
Query: 403 LRETQV--LILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKL-DYGQHVV 573
L+ + LILSP+REL +QI VI + +N+ GG + ++I+ + +++
Sbjct: 76 LQPADIGALILSPSRELCSQIVSVIQPFAEKLNLTVETVTGGQKVDKNIKMFKNKNVNIL 135
Query: 574 SGTPGRVFDMIR-RRVLRTRSIKMLVL 651
TPGR+F +I+ + L R ++ L L
Sbjct: 136 VATPGRLFQIIQHEKTLIARKMRTLQL 162
>Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical
protein F58G11.2 protein.
Length = 960
Score = 59.3 bits (137), Expect = 2e-09
Identities = 42/170 (24%), Positives = 76/170 (44%), Gaps = 10/170 (5%)
Frame = +1
Query: 169 VEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSG 348
VE +E + ++ + GL +L + + IQ I ++ G DV+ QA++
Sbjct: 369 VEIRNAEKDVRLTSWTNSGLHPTILETLKRIKYNNVRTIQGAMIPQVLDGHDVLGQAETS 428
Query: 349 TGKTATFSISILQTLDTTLRETQ----------VLILSPTRELATQIQKVILALGDFMNV 498
GKTA F + I+ + ET+ LIL+PTRELA QI + + ++
Sbjct: 429 AGKTAAFGLPIIDKILRMDEETRNKARQDDGPLALILAPTRELAAQIHEALRTYCQNTDI 488
Query: 499 QCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIRRRVLRTRSIKMLV 648
G ++ + ++ G ++ GT GR+ D + + ++ LV
Sbjct: 489 IVLLSYGQSDRARSLNEIRNGCDILIGTCGRIMDFTVKSHISLLHLRFLV 538
>AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA
helicase-4 protein.
Length = 1156
Score = 57.2 bits (132), Expect = 9e-09
Identities = 52/194 (26%), Positives = 89/194 (45%), Gaps = 13/194 (6%)
Frame = +1
Query: 109 KMTSSEVSSNRKILSEDLSNVEFDTSEDVEVIPTFDSMG-LRDELLRGIYTYGFEKPSAI 285
KM V+++ KI D V ++ + +FD L +L + +P+ I
Sbjct: 704 KMFEDAVNNDDKI-DFDQKVVASTGKVEIPDMASFDGFKILPQDLHDNLKRMKMNRPTPI 762
Query: 286 QQRSILPIVKGRDVIAQAQSGTGKTATFSISILQTL--------DTTLRE--TQVLILSP 435
Q+ S PI+ G DV+A A +G+GKT F I + L D T + ++LI++P
Sbjct: 763 QRASFFPIMHGNDVVACAHTGSGKTLAFLIPFVIKLMEEFEKDRDVTDEKPSPRLLIVAP 822
Query: 436 TRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKL-DYGQ-HVVSGTPGRVFDMIR 609
TREL Q L ++C GG + +++ L + Q +++ T GR+ D +
Sbjct: 823 TRELVNQTFTTARQLTYETGLKCGLAFGGYSRNANVQHLRSFSQLNILVATMGRLQDFVN 882
Query: 610 RRVLRTRSIKMLVL 651
+ +K +VL
Sbjct: 883 AGEVSLSKMKYIVL 896
>AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line helicase
protein 4 protein.
Length = 1156
Score = 57.2 bits (132), Expect = 9e-09
Identities = 52/194 (26%), Positives = 89/194 (45%), Gaps = 13/194 (6%)
Frame = +1
Query: 109 KMTSSEVSSNRKILSEDLSNVEFDTSEDVEVIPTFDSMG-LRDELLRGIYTYGFEKPSAI 285
KM V+++ KI D V ++ + +FD L +L + +P+ I
Sbjct: 704 KMFEDAVNNDDKI-DFDQKVVASTGKVEIPDMASFDGFKILPQDLHDNLKRMKMNRPTPI 762
Query: 286 QQRSILPIVKGRDVIAQAQSGTGKTATFSISILQTL--------DTTLRE--TQVLILSP 435
Q+ S PI+ G DV+A A +G+GKT F I + L D T + ++LI++P
Sbjct: 763 QRASFFPIMHGNDVVACAHTGSGKTLAFLIPFVIKLMEEFEKDRDVTDEKPSPRLLIVAP 822
Query: 436 TRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKL-DYGQ-HVVSGTPGRVFDMIR 609
TREL Q L ++C GG + +++ L + Q +++ T GR+ D +
Sbjct: 823 TRELVNQTFTTARQLTYETGLKCGLAFGGYSRNANVQHLRSFSQLNILVATMGRLQDFVN 882
Query: 610 RRVLRTRSIKMLVL 651
+ +K +VL
Sbjct: 883 AGEVSLSKMKYIVL 896
>U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical
protein F55F8.2b protein.
Length = 579
Score = 56.0 bits (129), Expect = 2e-08
Identities = 41/133 (30%), Positives = 69/133 (51%), Gaps = 13/133 (9%)
Frame = +1
Query: 250 IYTYGFEKPSAIQQRSILPIVKGR-DVIAQAQSGTGKTATFSISIL-----------QTL 393
I+ + F +P+ IQ + V+ R DV+ A++G+GKT F I ++ +T
Sbjct: 3 IFFFRFSEPTEIQSAVLPAAVRDRQDVLGAAETGSGKTLAFGIPLVARLLESSDDSQETE 62
Query: 394 DTTLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQ-HV 570
T +R + LI++PTREL QI K I AL + + +GG + R + + +
Sbjct: 63 STEVRGPRALIVAPTRELVIQIMKHINALISTTQLIATSIVGGLAQVKQERIISQQRPDI 122
Query: 571 VSGTPGRVFDMIR 609
V TPGR++ M++
Sbjct: 123 VVATPGRLWAMMQ 135
>AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical
protein Y55F3BR.1 protein.
Length = 728
Score = 56.0 bits (129), Expect = 2e-08
Identities = 34/115 (29%), Positives = 60/115 (52%), Gaps = 3/115 (2%)
Frame = +1
Query: 316 GRDVIAQAQSGTGKTATFSISILQTLDTTLRETQVLILSPTRELATQIQKVILALGDFMN 495
G +A AQ+ G +S + ++D++ +IL PTREL Q + I ++
Sbjct: 252 GTQYVAVAQAEDGNLKWWSAAEQLSIDSST--PLCVILEPTRELVQQTFQNIQTFASVLD 309
Query: 496 ---VQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVL 651
++C G N+ + +R L+ G +V GTP RVFD+I L T++++ +V+
Sbjct: 310 SPKIRCVTLAAGENMNQILRTLETGCDIVVGTPSRVFDLIHTGKLATKNLQFVVI 364
Score = 44.0 bits (99), Expect = 9e-05
Identities = 20/59 (33%), Positives = 34/59 (57%)
Frame = +1
Query: 211 FDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 387
F+ G+ EL + + + P+A+Q +I I+ G D + A++G+GKT FS+ I Q
Sbjct: 4 FEEFGIIPELSDALSSLNWTLPTAVQSEAIPAILGGADALIAAETGSGKTGAFSLPIAQ 62
>Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical
protein R05D11.4 protein.
Length = 581
Score = 48.0 bits (109), Expect = 6e-06
Identities = 42/161 (26%), Positives = 74/161 (45%), Gaps = 10/161 (6%)
Frame = +1
Query: 199 VIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSIS 378
+I F + LL + +PS IQ +SI + + R+V+A A +G+GKT F++
Sbjct: 124 IILRFSDSSMSPSLLNRLSENSIRQPSPIQMQSIPFMTERRNVLASAPTGSGKTLAFALP 183
Query: 379 IL-------QTLDTTLRETQVL---ILSPTRELATQIQKVILALGDFMNVQCHACIGGTN 528
++ Q D + + L +L PTRELA Q +F+ + I N
Sbjct: 184 VIDEILELKQRADYSSSNSSKLLAVVLEPTRELAAQ------TYTEFLKYCANTSISAAN 237
Query: 529 LGEDIRKLDYGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVL 651
+ + + +VS TP R+ + + + T S++ LV+
Sbjct: 238 FSGEETDIQHADILVS-TPNRIVFHLDK--IDTSSLRWLVV 275
>L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical
protein ZK686.2 protein.
Length = 593
Score = 36.3 bits (80), Expect = 0.019
Identities = 47/193 (24%), Positives = 80/193 (41%), Gaps = 3/193 (1%)
Frame = +1
Query: 49 EIFTYRLTCYFKNLEAN*IRKMTSSEVSSNRKILSEDLSNVEFDTSEDVEVIPTFDSMGL 228
EIF KNLEA K+TSS V N S + ++ TS+ + I + + +
Sbjct: 74 EIFKVLGKQEMKNLEA---LKVTSSWVQ-NATTFS---ATIDSSTSQKLSQIELPEHLTV 126
Query: 229 RDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQTLDT-TL 405
+ PS + P ++ RDV A +G+GKT + + +L + +
Sbjct: 127 PSAISTWFPVQYAVLPSLFFEIRSPPPLRPRDVAIAAPTGSGKTICYVLPVLAAVGSKPS 186
Query: 406 RETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTN-LGEDIRKL-DYGQHVVSG 579
+ Q +IL P + L QI D V + G N ++ R+L +V+
Sbjct: 187 KILQAVILVPVQTLVAQIVDEFKRWNDESGVAKVVSLSGANDFEKEARQLASDPPNVIVA 246
Query: 580 TPGRVFDMIRRRV 618
TP R+ + ++
Sbjct: 247 TPARLVQHLTSKI 259
>AL110485-3|CAB60351.1| 2145|Caenorhabditis elegans Hypothetical
protein Y46G5A.4 protein.
Length = 2145
Score = 35.1 bits (77), Expect = 0.044
Identities = 37/137 (27%), Positives = 71/137 (51%), Gaps = 7/137 (5%)
Frame = +1
Query: 262 GFEKPSAIQQRSILPIVKGRD-VIAQAQSGTGKTATFSISILQTLDTTLRETQVLILSPT 438
GF+ + IQ + + + + VI A +G+GKTA +++L+ + T E + + ++P
Sbjct: 1318 GFKVFNPIQTQVFRTVFESNENVIVCAPNGSGKTAIAELAVLRHFENT-PEAKAVYITPM 1376
Query: 439 RELATQIQKVILALGDFMNVQCHACIGGTNL---GE---DIRKLDYGQHVVSGTPGRVFD 600
++AT++ D+ + IG T + GE D++ GQ ++S TP R +D
Sbjct: 1377 EDMATKV------YADWKR-RLEPAIGHTIVLLTGEQTMDLKLAQRGQLIIS-TPER-WD 1427
Query: 601 MIRRRVLRTRSIKMLVL 651
I RR + +S++ + L
Sbjct: 1428 NISRRWKQRKSVQNVKL 1444
>AF025451-4|AAL16306.1| 567|Caenorhabditis elegans Hypothetical
protein C24H12.4b protein.
Length = 567
Score = 33.9 bits (74), Expect = 0.10
Identities = 23/77 (29%), Positives = 37/77 (48%)
Frame = +1
Query: 421 LILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVFD 600
+I++PT+EL TQI K+ + L + + N E+ L+ HVV TPG++
Sbjct: 100 VIIAPTKELITQIYKLFVKLSQALPFLQAINLCDINEEENSVWLEDRSHVVVTTPGKLLR 159
Query: 601 MIRRRVLRTRSIKMLVL 651
M R + LV+
Sbjct: 160 MCSLRPEYCTLVSYLVM 176
>U53141-4|AAA96106.1| 528|Caenorhabditis elegans Mutator protein 14
protein.
Length = 528
Score = 33.1 bits (72), Expect = 0.18
Identities = 15/37 (40%), Positives = 24/37 (64%)
Frame = +1
Query: 277 SAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQ 387
+A+QQ SI I +GR ++ +A +G GKT F I ++
Sbjct: 117 NAVQQMSIQVIREGRGLVVEAPTGIGKTYAFLIPAIE 153
>AF003740-7|AAC48142.2| 625|Caenorhabditis elegans Hypothetical
protein C41D11.7 protein.
Length = 625
Score = 32.7 bits (71), Expect = 0.23
Identities = 18/61 (29%), Positives = 32/61 (52%)
Frame = +1
Query: 325 VIAQAQSGTGKTATFSISILQTLDTTLRETQVLILSPTRELATQIQKVILALGDFMNVQC 504
V Q GTGKT T ++ + + + ++ QV++L+PTRE I+ + M ++
Sbjct: 85 VCIQGPPGTGKTFTLTLLLCRLIQ---QKKQVVVLAPTREALANIRMMTKKTLKRMGIKV 141
Query: 505 H 507
H
Sbjct: 142 H 142
>U64840-7|AAB04965.1| 340|Caenorhabditis elegans Hypothetical
protein ZC317.1 protein.
Length = 340
Score = 31.9 bits (69), Expect = 0.41
Identities = 20/68 (29%), Positives = 34/68 (50%), Gaps = 9/68 (13%)
Frame = +1
Query: 283 IQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQT---------LDTTLRETQVLILSP 435
+QQ SI I +GR ++ +A +G GKT F I ++ ++T +LI++
Sbjct: 19 VQQMSIQVIREGRGLVVEAPTGIGKTYAFLIPAIEAALENRQSNCFESTKPSPSILIMAS 78
Query: 436 TRELATQI 459
T L Q+
Sbjct: 79 TSALVDQL 86
>AF125963-6|AAK95885.1| 520|Caenorhabditis elegans Hypothetical
protein Y38A10A.6 protein.
Length = 520
Score = 31.1 bits (67), Expect = 0.71
Identities = 17/49 (34%), Positives = 28/49 (57%)
Frame = +1
Query: 277 SAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQTLDTTLRETQVL 423
+A+QQ+SI I R ++ A +G GKT F ++ ++ LRE +L
Sbjct: 116 NAVQQKSIQAIRDRRGLLVDAPTGIGKTYAF---LIPAIEIALRERPLL 161
>AL034489-9|CAI79279.1| 162|Caenorhabditis elegans Hypothetical
protein Y7A5A.11 protein.
Length = 162
Score = 30.7 bits (66), Expect = 0.94
Identities = 17/58 (29%), Positives = 32/58 (55%), Gaps = 4/58 (6%)
Frame = -3
Query: 323 SLPLTIGKMLLC*IAEGF-SKPYVYIPRNNSS---RSPMESKVGITSTSSLVSNSTFD 162
++PLT LC + + S+ ++Y+PR+NSS R ++ +G S ++ TF+
Sbjct: 13 AVPLTYSSSCLCSLRQSIKSESHMYVPRHNSSVLVRGSKDADIGERSDTTSKFTKTFN 70
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,589,556
Number of Sequences: 27780
Number of extensions: 302880
Number of successful extensions: 957
Number of sequences better than 10.0: 57
Number of HSP's better than 10.0 without gapping: 884
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 915
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1444744186
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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