Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc12e24
(698 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024826-10|AAM97977.1| 435|Caenorhabditis elegans Hypothetical... 30 1.4
AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical ... 30 1.4
U51997-1|AAG24067.1| 572|Caenorhabditis elegans Activated in bl... 30 1.8
Z78543-6|CAB01756.1| 2962|Caenorhabditis elegans Hypothetical pr... 29 2.4
Z78417-13|CAB01693.1| 2962|Caenorhabditis elegans Hypothetical p... 29 2.4
Z66514-5|CAA91344.1| 1133|Caenorhabditis elegans Hypothetical pr... 29 2.4
Z34801-9|CAA84332.1| 1133|Caenorhabditis elegans Hypothetical pr... 29 2.4
AF111934-1|AAD18003.1| 2962|Caenorhabditis elegans SDC-2 protein. 29 2.4
Z83244-7|CAB05829.1| 318|Caenorhabditis elegans Hypothetical pr... 29 3.2
Z81552-4|CAB04488.2| 765|Caenorhabditis elegans Hypothetical pr... 29 3.2
Z75952-5|CAB00093.2| 149|Caenorhabditis elegans Hypothetical pr... 29 3.2
Z49886-6|CAI79131.1| 149|Caenorhabditis elegans Hypothetical pr... 29 3.2
Z49886-5|CAA90055.1| 152|Caenorhabditis elegans Hypothetical pr... 29 3.2
Z68342-5|CAA92774.2| 416|Caenorhabditis elegans Hypothetical pr... 29 4.2
Z79695-4|CAB01969.3| 374|Caenorhabditis elegans Hypothetical pr... 28 7.4
U28735-10|AAM69112.1| 2427|Caenorhabditis elegans Hypothetical p... 28 7.4
Z81579-4|CAE17915.1| 212|Caenorhabditis elegans Hypothetical pr... 27 9.8
Z66499-4|CAA91301.1| 164|Caenorhabditis elegans Hypothetical pr... 27 9.8
Z54238-7|CAJ90498.1| 1861|Caenorhabditis elegans Hypothetical pr... 27 9.8
U58760-7|AAK31463.1| 188|Caenorhabditis elegans Hypothetical pr... 27 9.8
U55854-7|AAK68158.1| 166|Caenorhabditis elegans Hypothetical pr... 27 9.8
U55854-6|AAK68161.1| 197|Caenorhabditis elegans Hypothetical pr... 27 9.8
EU068466-1|ABU49431.1| 801|Caenorhabditis elegans PRO-3 protein. 27 9.8
AL132948-40|CAD31812.3| 801|Caenorhabditis elegans Hypothetical... 27 9.8
>AC024826-10|AAM97977.1| 435|Caenorhabditis elegans Hypothetical
protein Y55F3AM.3c protein.
Length = 435
Score = 30.3 bits (65), Expect = 1.4
Identities = 13/38 (34%), Positives = 16/38 (42%)
Frame = -2
Query: 535 ANHHARLQFEGAATRCFCCQNLTASKFSTTPAWSRTMR 422
A H Q AT+CF N+ T PAW +R
Sbjct: 263 AQHAGHSQIPSIATQCFLLSNMFDPSKETEPAWDHDIR 300
>AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical
protein Y55F3AM.3a protein.
Length = 580
Score = 30.3 bits (65), Expect = 1.4
Identities = 13/38 (34%), Positives = 16/38 (42%)
Frame = -2
Query: 535 ANHHARLQFEGAATRCFCCQNLTASKFSTTPAWSRTMR 422
A H Q AT+CF N+ T PAW +R
Sbjct: 408 AQHAGHSQIPSIATQCFLLSNMFDPSKETEPAWDHDIR 445
>U51997-1|AAG24067.1| 572|Caenorhabditis elegans Activated in
blocked unfolded proteinresponse protein 2 protein.
Length = 572
Score = 29.9 bits (64), Expect = 1.8
Identities = 17/68 (25%), Positives = 28/68 (41%), Gaps = 3/68 (4%)
Frame = -2
Query: 352 RCPNCNQVCR-RAQFQDLCKNLLHCRILRSCRCARICT*NCA--CCI*MNPI*RCATIVG 182
+C C C+ + +L + +S +C C +C C + PI +CAT
Sbjct: 470 QCQQCQSACQFPVVAPQVVAVILEASVSQSAQCEPQCQQSCQQQCIQQLQPIQQCATACT 529
Query: 181 RLCGTFCS 158
+ C CS
Sbjct: 530 QSCSQSCS 537
>Z78543-6|CAB01756.1| 2962|Caenorhabditis elegans Hypothetical protein
C35C5.1 protein.
Length = 2962
Score = 29.5 bits (63), Expect = 2.4
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +1
Query: 541 KIESVLKHVKKLNTNSEKFMVTHETFKNDVGNRF 642
K+E + + KL N +K ++H++ KND RF
Sbjct: 1738 KLERDFEEIVKLIQNEKKLALSHKSHKNDENRRF 1771
>Z78417-13|CAB01693.1| 2962|Caenorhabditis elegans Hypothetical
protein C35C5.1 protein.
Length = 2962
Score = 29.5 bits (63), Expect = 2.4
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +1
Query: 541 KIESVLKHVKKLNTNSEKFMVTHETFKNDVGNRF 642
K+E + + KL N +K ++H++ KND RF
Sbjct: 1738 KLERDFEEIVKLIQNEKKLALSHKSHKNDENRRF 1771
>Z66514-5|CAA91344.1| 1133|Caenorhabditis elegans Hypothetical protein
F59A2.6 protein.
Length = 1133
Score = 29.5 bits (63), Expect = 2.4
Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = +1
Query: 514 EGERDDLRDKIESVLKHVKKLNTNSEKFMVTHETFKNDVGNRFEQFELRL-NELDAK 681
EGE +L D+IE + VKKL +E V +T V ++ +L NEL+ K
Sbjct: 910 EGEAKELTDRIEGLEAEVKKLTAANETKAVKADTDARKVVRELQKEVKQLYNELNDK 966
>Z34801-9|CAA84332.1| 1133|Caenorhabditis elegans Hypothetical protein
F59A2.6 protein.
Length = 1133
Score = 29.5 bits (63), Expect = 2.4
Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = +1
Query: 514 EGERDDLRDKIESVLKHVKKLNTNSEKFMVTHETFKNDVGNRFEQFELRL-NELDAK 681
EGE +L D+IE + VKKL +E V +T V ++ +L NEL+ K
Sbjct: 910 EGEAKELTDRIEGLEAEVKKLTAANETKAVKADTDARKVVRELQKEVKQLYNELNDK 966
>AF111934-1|AAD18003.1| 2962|Caenorhabditis elegans SDC-2 protein.
Length = 2962
Score = 29.5 bits (63), Expect = 2.4
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +1
Query: 541 KIESVLKHVKKLNTNSEKFMVTHETFKNDVGNRF 642
K+E + + KL N +K ++H++ KND RF
Sbjct: 1738 KLERDFEEIVKLIQNEKKLALSHKSHKNDENRRF 1771
>Z83244-7|CAB05829.1| 318|Caenorhabditis elegans Hypothetical
protein W06F12.3 protein.
Length = 318
Score = 29.1 bits (62), Expect = 3.2
Identities = 16/60 (26%), Positives = 30/60 (50%)
Frame = +1
Query: 346 DSDQVYHLNEIIFHKQKSKRDLNSLGALFATKQGLLKILMRLNFDNKSNALLHLQTEGER 525
D DQVYH +++ +S++ +G F T L+++ R N N ++ L++ R
Sbjct: 246 DQDQVYHAKQLLLRNFQSRK----MGQNFGTFPRALELIKRTETPNYENFIVILKSCSSR 301
>Z81552-4|CAB04488.2| 765|Caenorhabditis elegans Hypothetical
protein F56G4.6 protein.
Length = 765
Score = 29.1 bits (62), Expect = 3.2
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = -1
Query: 692 SMLSLASSSFKRNSNCSNLLPTSFLNVSWVT 600
++L L S K NCS +LP SF + +T
Sbjct: 109 TLLKLCKKSIKTTGNCSKILPISFRELPGLT 139
>Z75952-5|CAB00093.2| 149|Caenorhabditis elegans Hypothetical
protein F29D10.2 protein.
Length = 149
Score = 29.1 bits (62), Expect = 3.2
Identities = 13/39 (33%), Positives = 16/39 (41%)
Frame = -2
Query: 340 CNQVCRRAQFQDLCKNLLHCRILRSCRCARICT*NCACC 224
C C R + C+ C R+C C R CT CC
Sbjct: 64 CGCCCCRPRCCCCCRPKCCCTCCRTCCCTRCCTCCRPCC 102
>Z49886-6|CAI79131.1| 149|Caenorhabditis elegans Hypothetical
protein C06A1.7 protein.
Length = 149
Score = 29.1 bits (62), Expect = 3.2
Identities = 13/39 (33%), Positives = 16/39 (41%)
Frame = -2
Query: 340 CNQVCRRAQFQDLCKNLLHCRILRSCRCARICT*NCACC 224
C C R + C+ C R+C C R CT CC
Sbjct: 66 CGCCCCRPRCCCCCRPKCCCTCCRTCCCTRCCTCCRPCC 104
>Z49886-5|CAA90055.1| 152|Caenorhabditis elegans Hypothetical
protein C06A1.6 protein.
Length = 152
Score = 29.1 bits (62), Expect = 3.2
Identities = 13/39 (33%), Positives = 16/39 (41%)
Frame = -2
Query: 340 CNQVCRRAQFQDLCKNLLHCRILRSCRCARICT*NCACC 224
C C R + C+ C R+C C R CT CC
Sbjct: 69 CGCCCCRPRCCCCCRPKCCCTCCRTCCCTRCCTCCRPCC 107
>Z68342-5|CAA92774.2| 416|Caenorhabditis elegans Hypothetical
protein F38E11.6a protein.
Length = 416
Score = 28.7 bits (61), Expect = 4.2
Identities = 11/41 (26%), Positives = 24/41 (58%)
Frame = +1
Query: 526 DDLRDKIESVLKHVKKLNTNSEKFMVTHETFKNDVGNRFEQ 648
D+L +I +V +++ N + + F+V +FKN +F++
Sbjct: 303 DNLTAQISAVYRYIASHNRHDDNFLVVVPSFKNQDAEKFKR 343
>Z79695-4|CAB01969.3| 374|Caenorhabditis elegans Hypothetical
protein F27D4.4a protein.
Length = 374
Score = 27.9 bits (59), Expect = 7.4
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +1
Query: 310 EIAHDDILDCNWDSDQVYHLNEIIFHKQKSK 402
E+ D+ + NWDSD+ LNE++ K K+K
Sbjct: 133 EVEKDEETNENWDSDK---LNEVVNKKNKNK 160
>U28735-10|AAM69112.1| 2427|Caenorhabditis elegans Hypothetical
protein F48E3.8a protein.
Length = 2427
Score = 27.9 bits (59), Expect = 7.4
Identities = 12/38 (31%), Positives = 15/38 (39%)
Frame = -2
Query: 547 QFCRANHHARLQFEGAATRCFCCQNLTASKFSTTPAWS 434
++C N H Q + C C N S FS P S
Sbjct: 1265 EYCFRNSHCESQRQCLKNVCKCASNFVQSSFSCVPRMS 1302
>Z81579-4|CAE17915.1| 212|Caenorhabditis elegans Hypothetical
protein R13H4.8 protein.
Length = 212
Score = 27.5 bits (58), Expect = 9.8
Identities = 14/40 (35%), Positives = 14/40 (35%)
Frame = -2
Query: 346 PNCNQVCRRAQFQDLCKNLLHCRILRSCRCARICT*NCAC 227
P C CRR C C R C C R C C C
Sbjct: 91 PRCCCCCRRC-----CTCCRTCCCTRCCTCCRPCCCGCGC 125
>Z66499-4|CAA91301.1| 164|Caenorhabditis elegans Hypothetical
protein T01B7.8 protein.
Length = 164
Score = 27.5 bits (58), Expect = 9.8
Identities = 14/40 (35%), Positives = 14/40 (35%)
Frame = -2
Query: 346 PNCNQVCRRAQFQDLCKNLLHCRILRSCRCARICT*NCAC 227
P C CRR C C R C C R C C C
Sbjct: 89 PRCCCCCRRC-----CTCCRTCCCTRCCTCCRPCCCGCGC 123
>Z54238-7|CAJ90498.1| 1861|Caenorhabditis elegans Hypothetical protein
T28C6.9 protein.
Length = 1861
Score = 27.5 bits (58), Expect = 9.8
Identities = 22/69 (31%), Positives = 35/69 (50%), Gaps = 5/69 (7%)
Frame = +1
Query: 424 ALFATKQGLLKILMRLNFDNKSNALLHLQTE-GERDDLRDKIES----VLKHVKKLNTNS 588
A T+Q + L R N + ++ + LQ E E+D+ + KIE + +HVK+L
Sbjct: 963 AKLTTRQADVDSLFRTNAE-LAHTNVRLQNEVDEQDEWKAKIEEEKEQLEQHVKELEDQV 1021
Query: 589 EKFMVTHET 615
+ M HET
Sbjct: 1022 AELMEQHET 1030
>U58760-7|AAK31463.1| 188|Caenorhabditis elegans Hypothetical
protein C27A2.5 protein.
Length = 188
Score = 27.5 bits (58), Expect = 9.8
Identities = 14/40 (35%), Positives = 14/40 (35%)
Frame = -2
Query: 346 PNCNQVCRRAQFQDLCKNLLHCRILRSCRCARICT*NCAC 227
P C CRR C C R C C R C C C
Sbjct: 90 PKCCCCCRRC-----CTCCRTCCCTRCCTCCRPCCCGCGC 124
>U55854-7|AAK68158.1| 166|Caenorhabditis elegans Hypothetical
protein C04G6.10 protein.
Length = 166
Score = 27.5 bits (58), Expect = 9.8
Identities = 14/40 (35%), Positives = 14/40 (35%)
Frame = -2
Query: 346 PNCNQVCRRAQFQDLCKNLLHCRILRSCRCARICT*NCAC 227
P C CRR C C R C C R C C C
Sbjct: 90 PRCCCCCRRC-----CTCCRTCCCTRCCTCCRPCCCGCGC 124
>U55854-6|AAK68161.1| 197|Caenorhabditis elegans Hypothetical
protein C04G6.7 protein.
Length = 197
Score = 27.5 bits (58), Expect = 9.8
Identities = 14/40 (35%), Positives = 14/40 (35%)
Frame = -2
Query: 346 PNCNQVCRRAQFQDLCKNLLHCRILRSCRCARICT*NCAC 227
P C CRR C C R C C R C C C
Sbjct: 91 PRCCCCCRRC-----CTCCRTCCCTRCCTCCRPCCCGCGC 125
>EU068466-1|ABU49431.1| 801|Caenorhabditis elegans PRO-3 protein.
Length = 801
Score = 27.5 bits (58), Expect = 9.8
Identities = 12/35 (34%), Positives = 22/35 (62%)
Frame = +1
Query: 454 KILMRLNFDNKSNALLHLQTEGERDDLRDKIESVL 558
+ L + N+ ++ LLHLQ E R +++ ++SVL
Sbjct: 64 EFLEQFNYFVQTMKLLHLQPEQSRQEMQSLVDSVL 98
>AL132948-40|CAD31812.3| 801|Caenorhabditis elegans Hypothetical
protein Y39B6A.14 protein.
Length = 801
Score = 27.5 bits (58), Expect = 9.8
Identities = 12/35 (34%), Positives = 22/35 (62%)
Frame = +1
Query: 454 KILMRLNFDNKSNALLHLQTEGERDDLRDKIESVL 558
+ L + N+ ++ LLHLQ E R +++ ++SVL
Sbjct: 64 EFLEQFNYFVQTMKLLHLQPEQSRQEMQSLVDSVL 98
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,888,890
Number of Sequences: 27780
Number of extensions: 277945
Number of successful extensions: 1095
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1021
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1079
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1613473434
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -