Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc12e13
(737 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_40337| Best HMM Match : Ribosomal_L7Ae (HMM E-Value=7.3e-31) 95 4e-20
SB_32060| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_15822| Best HMM Match : CaMBD (HMM E-Value=5.1) 29 3.0
SB_39872| Best HMM Match : CaMBD (HMM E-Value=5.1) 29 5.2
SB_12627| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.2
SB_59285| Best HMM Match : SecIII_SopE_N (HMM E-Value=3.7) 28 9.1
SB_49546| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.1
SB_49301| Best HMM Match : Glyco_hydro_67N (HMM E-Value=3.1) 28 9.1
SB_47063| Best HMM Match : APOBEC_C (HMM E-Value=0.41) 28 9.1
SB_43595| Best HMM Match : Glyco_hydro_67N (HMM E-Value=3.1) 28 9.1
SB_43594| Best HMM Match : Glyco_hydro_67N (HMM E-Value=3.1) 28 9.1
SB_36027| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.1
SB_32006| Best HMM Match : Glyco_hydro_67N (HMM E-Value=3.1) 28 9.1
SB_31068| Best HMM Match : DUF240 (HMM E-Value=2.1) 28 9.1
SB_22438| Best HMM Match : Glyco_hydro_67N (HMM E-Value=1.7) 28 9.1
SB_7206| Best HMM Match : DUF240 (HMM E-Value=2.1) 28 9.1
SB_6648| Best HMM Match : DUF240 (HMM E-Value=2.2) 28 9.1
SB_6638| Best HMM Match : CaMBD (HMM E-Value=5.1) 28 9.1
SB_59692| Best HMM Match : CaMBD (HMM E-Value=7.5) 28 9.1
SB_52800| Best HMM Match : CaMBD (HMM E-Value=5.1) 28 9.1
SB_50590| Best HMM Match : Glyco_hydro_67N (HMM E-Value=3.1) 28 9.1
SB_45646| Best HMM Match : CaMBD (HMM E-Value=5.1) 28 9.1
SB_41017| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.1
SB_39798| Best HMM Match : CaMBD (HMM E-Value=5.1) 28 9.1
SB_38666| Best HMM Match : DUF240 (HMM E-Value=2.2) 28 9.1
SB_26940| Best HMM Match : CaMBD (HMM E-Value=5.1) 28 9.1
SB_20603| Best HMM Match : Glyco_hydro_67N (HMM E-Value=3.1) 28 9.1
SB_18924| Best HMM Match : Glyco_hydro_67N (HMM E-Value=3.1) 28 9.1
SB_9514| Best HMM Match : CaMBD (HMM E-Value=7.6) 28 9.1
SB_9286| Best HMM Match : DUF240 (HMM E-Value=1) 28 9.1
SB_8796| Best HMM Match : Glyco_hydro_67N (HMM E-Value=3.1) 28 9.1
>SB_40337| Best HMM Match : Ribosomal_L7Ae (HMM E-Value=7.3e-31)
Length = 108
Score = 95.5 bits (227), Expect = 4e-20
Identities = 41/47 (87%), Positives = 45/47 (95%)
Frame = +1
Query: 544 RKSEIEYYALLAKTGVHHYSGNNIELGTACGKYYRVCTLAITDPGDS 684
RKSEIEYYA+LAKTGVHHY+GNNIELGTACGKY+RV L+ITDPGDS
Sbjct: 46 RKSEIEYYAMLAKTGVHHYTGNNIELGTACGKYFRVSVLSITDPGDS 92
Score = 76.6 bits (180), Expect = 2e-14
Identities = 38/46 (82%), Positives = 40/46 (86%)
Frame = +2
Query: 83 IESINSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLR 220
+ESINSRLALVMKSGK+ LG K TLKTLRQGKAKLVIIA N P LR
Sbjct: 1 MESINSRLALVMKSGKFTLGLKSTLKTLRQGKAKLVIIANNTPQLR 46
>SB_32060| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1162
Score = 30.3 bits (65), Expect = 1.7
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = +3
Query: 495 MWGTYGVVFKLDTSLWQEI*D*ILRPP 575
MWGT VV D +LW+E+ RPP
Sbjct: 81 MWGTINVVSVADPTLWKELRSLFDRPP 107
>SB_15822| Best HMM Match : CaMBD (HMM E-Value=5.1)
Length = 139
Score = 29.5 bits (63), Expect = 3.0
Identities = 17/49 (34%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Frame = +1
Query: 406 KQIIFNLP-LMINYKFD*IAFVS*YCFAGSQCGEPME*SLNSILHFGRK 549
K + ++L + +N+ +FV+ YC+ SQC + M+ SL S L RK
Sbjct: 17 KSVFYHLTGVSVNFHLLRSSFVT-YCYGDSQCTDAMKDSLASALRHTRK 64
>SB_39872| Best HMM Match : CaMBD (HMM E-Value=5.1)
Length = 111
Score = 28.7 bits (61), Expect = 5.2
Identities = 17/49 (34%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Frame = +1
Query: 406 KQIIFNLP-LMINYKFD*IAFVS*YCFAGSQCGEPME*SLNSILHFGRK 549
K ++++L + +N +FV+ YC+ SQC + M+ SL S L RK
Sbjct: 17 KSVLYHLTGVSVNLHLLRSSFVT-YCYGDSQCTDAMKDSLASALRHTRK 64
>SB_12627| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 444
Score = 28.7 bits (61), Expect = 5.2
Identities = 15/33 (45%), Positives = 19/33 (57%)
Frame = -2
Query: 619 IQCCSRCSGEHLS*LGGRSIQSQISCQSEVSSL 521
+ CS SG HLS GR +IS +S+VS L
Sbjct: 370 VSSCSYESGSHLSASPGREEMGEISVKSKVSPL 402
>SB_59285| Best HMM Match : SecIII_SopE_N (HMM E-Value=3.7)
Length = 204
Score = 27.9 bits (59), Expect = 9.1
Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = +1
Query: 406 KQIIFNLP-LMINYKFD*IAFVS*YCFAGSQCGEPME*SLNSILHFGRK 549
K + ++L + +N +FV+ YC+ SQC + M+ SL S L RK
Sbjct: 17 KSVFYHLTGVSVNLHLLRSSFVT-YCYGDSQCTDAMKDSLASALRHTRK 64
>SB_49546| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1214
Score = 27.9 bits (59), Expect = 9.1
Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = +1
Query: 406 KQIIFNLP-LMINYKFD*IAFVS*YCFAGSQCGEPME*SLNSILHFGRK 549
K + ++L + +N +FV+ YC+ SQC + M+ SL S L RK
Sbjct: 212 KSVFYHLTGVSVNLHLLRSSFVT-YCYGDSQCTDAMKDSLASALRHTRK 259
>SB_49301| Best HMM Match : Glyco_hydro_67N (HMM E-Value=3.1)
Length = 189
Score = 27.9 bits (59), Expect = 9.1
Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = +1
Query: 406 KQIIFNLP-LMINYKFD*IAFVS*YCFAGSQCGEPME*SLNSILHFGRK 549
K + ++L + +N +FV+ YC+ SQC + M+ SL S L RK
Sbjct: 2 KSVFYHLTGVSVNLHLLRSSFVT-YCYGDSQCTDAMKDSLASALRHTRK 49
>SB_47063| Best HMM Match : APOBEC_C (HMM E-Value=0.41)
Length = 430
Score = 27.9 bits (59), Expect = 9.1
Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = +1
Query: 406 KQIIFNLP-LMINYKFD*IAFVS*YCFAGSQCGEPME*SLNSILHFGRK 549
K + ++L + +N +FV+ YC+ SQC + M+ SL S L RK
Sbjct: 282 KSVFYHLTGVSVNLHLLRSSFVT-YCYGDSQCTDAMKDSLASALRHTRK 329
>SB_43595| Best HMM Match : Glyco_hydro_67N (HMM E-Value=3.1)
Length = 216
Score = 27.9 bits (59), Expect = 9.1
Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = +1
Query: 406 KQIIFNLP-LMINYKFD*IAFVS*YCFAGSQCGEPME*SLNSILHFGRK 549
K + ++L + +N +FV+ YC+ SQC + M+ SL S L RK
Sbjct: 17 KSVFYHLTGVSVNLHLLRSSFVT-YCYGDSQCTDAMKDSLASALRHTRK 64
>SB_43594| Best HMM Match : Glyco_hydro_67N (HMM E-Value=3.1)
Length = 342
Score = 27.9 bits (59), Expect = 9.1
Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = +1
Query: 406 KQIIFNLP-LMINYKFD*IAFVS*YCFAGSQCGEPME*SLNSILHFGRK 549
K + ++L + +N +FV+ YC+ SQC + M+ SL S L RK
Sbjct: 155 KSVFYHLTGVSVNLHLLRSSFVT-YCYGDSQCTDAMKDSLASALRHTRK 202
>SB_36027| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 204
Score = 27.9 bits (59), Expect = 9.1
Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = +1
Query: 406 KQIIFNLP-LMINYKFD*IAFVS*YCFAGSQCGEPME*SLNSILHFGRK 549
K + ++L + +N +FV+ YC+ SQC + M+ SL S L RK
Sbjct: 17 KSVFYHLTGVSVNLHLLRSSFVT-YCYGDSQCTDAMKDSLASALRHTRK 64
>SB_32006| Best HMM Match : Glyco_hydro_67N (HMM E-Value=3.1)
Length = 497
Score = 27.9 bits (59), Expect = 9.1
Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = +1
Query: 406 KQIIFNLP-LMINYKFD*IAFVS*YCFAGSQCGEPME*SLNSILHFGRK 549
K + ++L + +N +FV+ YC+ SQC + M+ SL S L RK
Sbjct: 310 KSVFYHLTGVSVNLHLLRSSFVT-YCYGDSQCTDAMKDSLASALRHTRK 357
>SB_31068| Best HMM Match : DUF240 (HMM E-Value=2.1)
Length = 453
Score = 27.9 bits (59), Expect = 9.1
Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = +1
Query: 406 KQIIFNLP-LMINYKFD*IAFVS*YCFAGSQCGEPME*SLNSILHFGRK 549
K + ++L + +N +FV+ YC+ SQC + M+ SL S L RK
Sbjct: 266 KSVFYHLTGVSVNLHLLRSSFVT-YCYGDSQCTDAMKDSLASALRHTRK 313
>SB_22438| Best HMM Match : Glyco_hydro_67N (HMM E-Value=1.7)
Length = 296
Score = 27.9 bits (59), Expect = 9.1
Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = +1
Query: 406 KQIIFNLP-LMINYKFD*IAFVS*YCFAGSQCGEPME*SLNSILHFGRK 549
K + ++L + +N +FV+ YC+ SQC + M+ SL S L RK
Sbjct: 109 KSVFYHLTGVSVNLHLLRSSFVT-YCYGDSQCTDAMKDSLASALRHTRK 156
>SB_7206| Best HMM Match : DUF240 (HMM E-Value=2.1)
Length = 174
Score = 27.9 bits (59), Expect = 9.1
Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = +1
Query: 406 KQIIFNLP-LMINYKFD*IAFVS*YCFAGSQCGEPME*SLNSILHFGRK 549
K + ++L + +N +FV+ YC+ SQC + M+ SL S L RK
Sbjct: 52 KSVFYHLTGVSVNLHLLRSSFVT-YCYGDSQCTDAMKDSLASALRHTRK 99
>SB_6648| Best HMM Match : DUF240 (HMM E-Value=2.2)
Length = 146
Score = 27.9 bits (59), Expect = 9.1
Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = +1
Query: 406 KQIIFNLP-LMINYKFD*IAFVS*YCFAGSQCGEPME*SLNSILHFGRK 549
K + ++L + +N +FV+ YC+ SQC + M+ SL S L RK
Sbjct: 52 KSVFYHLTGVSVNLHLLRSSFVT-YCYGDSQCTDAMKDSLASALRHTRK 99
>SB_6638| Best HMM Match : CaMBD (HMM E-Value=5.1)
Length = 165
Score = 27.9 bits (59), Expect = 9.1
Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = +1
Query: 406 KQIIFNLP-LMINYKFD*IAFVS*YCFAGSQCGEPME*SLNSILHFGRK 549
K + ++L + +N +FV+ YC+ SQC + M+ SL S L RK
Sbjct: 17 KSVFYHLTGVSVNLHLLRSSFVT-YCYGDSQCTDAMKDSLASALRHTRK 64
>SB_59692| Best HMM Match : CaMBD (HMM E-Value=7.5)
Length = 204
Score = 27.9 bits (59), Expect = 9.1
Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = +1
Query: 406 KQIIFNLP-LMINYKFD*IAFVS*YCFAGSQCGEPME*SLNSILHFGRK 549
K + ++L + +N +FV+ YC+ SQC + M+ SL S L RK
Sbjct: 17 KSVFYHLTGVSVNLHLLRSSFVT-YCYGDSQCTDAMKDSLASALRHTRK 64
>SB_52800| Best HMM Match : CaMBD (HMM E-Value=5.1)
Length = 204
Score = 27.9 bits (59), Expect = 9.1
Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = +1
Query: 406 KQIIFNLP-LMINYKFD*IAFVS*YCFAGSQCGEPME*SLNSILHFGRK 549
K + ++L + +N +FV+ YC+ SQC + M+ SL S L RK
Sbjct: 17 KSVFYHLTGVSVNLHLLRSSFVT-YCYGDSQCTDAMKDSLASALRHTRK 64
>SB_50590| Best HMM Match : Glyco_hydro_67N (HMM E-Value=3.1)
Length = 176
Score = 27.9 bits (59), Expect = 9.1
Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = +1
Query: 406 KQIIFNLP-LMINYKFD*IAFVS*YCFAGSQCGEPME*SLNSILHFGRK 549
K + ++L + +N +FV+ YC+ SQC + M+ SL S L RK
Sbjct: 17 KSVFYHLTGVSVNLHLLRSSFVT-YCYGDSQCTDAMKDSLASALRHTRK 64
>SB_45646| Best HMM Match : CaMBD (HMM E-Value=5.1)
Length = 193
Score = 27.9 bits (59), Expect = 9.1
Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = +1
Query: 406 KQIIFNLP-LMINYKFD*IAFVS*YCFAGSQCGEPME*SLNSILHFGRK 549
K + ++L + +N +FV+ YC+ SQC + M+ SL S L RK
Sbjct: 17 KSVFYHLTGVSVNLHLLKSSFVT-YCYGDSQCTDAMKDSLASALRHTRK 64
>SB_41017| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 108
Score = 27.9 bits (59), Expect = 9.1
Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = +1
Query: 406 KQIIFNLP-LMINYKFD*IAFVS*YCFAGSQCGEPME*SLNSILHFGRK 549
K + ++L + +N +FV+ YC+ SQC + M+ SL S L RK
Sbjct: 17 KSVFYHLTGVSVNLHLLRSSFVT-YCYGDSQCTDAMKDSLASALRHTRK 64
>SB_39798| Best HMM Match : CaMBD (HMM E-Value=5.1)
Length = 108
Score = 27.9 bits (59), Expect = 9.1
Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = +1
Query: 406 KQIIFNLP-LMINYKFD*IAFVS*YCFAGSQCGEPME*SLNSILHFGRK 549
K + ++L + +N +FV+ YC+ SQC + M+ SL S L RK
Sbjct: 17 KSVFYHLTGVSVNLHLLRSSFVT-YCYGDSQCTDAMKDSLASALRHTRK 64
>SB_38666| Best HMM Match : DUF240 (HMM E-Value=2.2)
Length = 239
Score = 27.9 bits (59), Expect = 9.1
Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = +1
Query: 406 KQIIFNLP-LMINYKFD*IAFVS*YCFAGSQCGEPME*SLNSILHFGRK 549
K + ++L + +N +FV+ YC+ SQC + M+ SL S L RK
Sbjct: 52 KSVFYHLTGVSVNLHLLRSSFVT-YCYGDSQCTDAMKDSLASALRHTRK 99
>SB_26940| Best HMM Match : CaMBD (HMM E-Value=5.1)
Length = 111
Score = 27.9 bits (59), Expect = 9.1
Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = +1
Query: 406 KQIIFNLP-LMINYKFD*IAFVS*YCFAGSQCGEPME*SLNSILHFGRK 549
K + ++L + +N +FV+ YC+ SQC + M+ SL S L RK
Sbjct: 17 KSVFYHLTGVSVNLHLLRSSFVT-YCYGDSQCTDAMKDSLASALRHTRK 64
>SB_20603| Best HMM Match : Glyco_hydro_67N (HMM E-Value=3.1)
Length = 204
Score = 27.9 bits (59), Expect = 9.1
Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = +1
Query: 406 KQIIFNLP-LMINYKFD*IAFVS*YCFAGSQCGEPME*SLNSILHFGRK 549
K + ++L + +N +FV+ YC+ SQC + M+ SL S L RK
Sbjct: 17 KSVFYHLTGVSVNLHLLRSSFVT-YCYGDSQCTDAMKDSLASALRHTRK 64
>SB_18924| Best HMM Match : Glyco_hydro_67N (HMM E-Value=3.1)
Length = 176
Score = 27.9 bits (59), Expect = 9.1
Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = +1
Query: 406 KQIIFNLP-LMINYKFD*IAFVS*YCFAGSQCGEPME*SLNSILHFGRK 549
K + ++L + +N +FV+ YC+ SQC + M+ SL S L RK
Sbjct: 17 KSVFYHLTGVSVNLHLLRSSFVT-YCYGDSQCTDAMKDSLASALRHTRK 64
>SB_9514| Best HMM Match : CaMBD (HMM E-Value=7.6)
Length = 111
Score = 27.9 bits (59), Expect = 9.1
Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = +1
Query: 406 KQIIFNLP-LMINYKFD*IAFVS*YCFAGSQCGEPME*SLNSILHFGRK 549
K + ++L + +N +FV+ YC+ SQC + M+ SL S L RK
Sbjct: 17 KSVFYHLTGVSVNLHLLRSSFVT-YCYGDSQCTDAMKDSLASALRHTRK 64
>SB_9286| Best HMM Match : DUF240 (HMM E-Value=1)
Length = 292
Score = 27.9 bits (59), Expect = 9.1
Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = +1
Query: 406 KQIIFNLP-LMINYKFD*IAFVS*YCFAGSQCGEPME*SLNSILHFGRK 549
K + ++L + +N +FV+ YC+ SQC + M+ SL S L RK
Sbjct: 106 KSVFYHLTGVSVNLHLLRSSFVT-YCYGDSQCTDAMKDSLASALRHTRK 153
>SB_8796| Best HMM Match : Glyco_hydro_67N (HMM E-Value=3.1)
Length = 204
Score = 27.9 bits (59), Expect = 9.1
Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = +1
Query: 406 KQIIFNLP-LMINYKFD*IAFVS*YCFAGSQCGEPME*SLNSILHFGRK 549
K + ++L + +N +FV+ YC+ SQC + M+ SL S L RK
Sbjct: 17 KSVFYHLTGVSVNLHLLRSSFVT-YCYGDSQCTDAMKDSLASALRHTRK 64
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,489,466
Number of Sequences: 59808
Number of extensions: 434688
Number of successful extensions: 962
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 900
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 961
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1986074805
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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